Rmu_sc0001518.1_g000013

Ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001518.1
OG0000172
Physical Location & Seq
Forward (+)
27625 .. 28851
1227 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001518.1_g000013.1.cds

Sequence Viewer

Length: 1014 bp
atggttgttgctatcgcttccatgactgtcaggcttgcgaccaaattgtcgctcaaggaaggtgaagaaccagtggatttgggaaatctcaaggttccggggaaggagtttttggctcgcaacctttatttggtggggaggcttaacacatgtagggcggtggtgttggattcattccggagtgcggtgagatcgatgtggagactgacgggggctgtggaggtccaaccacagggtgatcggtttttgtttacgttcactcatgaacgggatgttgcacgggtaaagaagggaggtccatgggggtatcccaggggcatattgacggaacctactgtccggttggtgggtgggacgattgaagaggttttggaggtagatcgtatggcacttcgctggggagaagctagagtccggctagttctatccatcaatgatccggtgtgtatggatcgcagggttagggtttctcctatcgacgtcctagcgctgcgattcaggtatgagaggcttctagggcgctgcaggttgtgcgctctgctgaatcatggagtgcagcgatgccttagggaggatgtgtcggagacaaacatcgtactggaggcgggaaaaggtgcagattcgttcacttccagagctagggcatcgcttggaactaagggaacctccgctcactctccggtggtgggggtgcgtcgtccacagaaggaggaggaccctgaggatggtaaaagcggtaaacatagtttggctcttatcccggacaacttgcagccggaaaaccttggtttggaattttctttcgaaggtctggtcaaggtgaaagtgatgtcggttattaaggtctataagaagaagggtaggcctcgtggtcaaagaaacaaagttaaaggctcgccggcagtgtctatttgtggtggctttgattccatggcttctgtttcaattgaggatgggcctagcggtgtgcatgaggggttggaagctttagaacctgtttcccggtccaattag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00230 ko00670 ko01100 ko01110 ko01130 ko01523 map00230 map00670 map01100 map01110 map01130 map01523
Pfam Domains
Protein Families
DDE_Tnp_1_7 DUF4283 RVT_1 RVT_3 zf-CCHC_4 zf-RVT

Protein Analysis

337

Amino Acids

37.07

Weight (kDa)

9.64

Isoelectric Point (pI)

42.24

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000172)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G59650 AT3G59650
fragaria_vesca FvH4_1g19981 FvH4_1g22221 FvH4_2g13530 FvH4_2g13791 FvH4_2g14332 FvH4_2g14911 FvH4_2g16332 FvH4_3g10980 FvH4_3g11141 FvH4_3g14171 FvH4_3g26311 FvH4_3g28254 FvH4_3g29741 FvH4_4g05261 FvH4_4g12002 FvH4_4g13371 FvH4_4g15541 FvH4_4g18531 FvH4_5g02661 FvH4_5g02662 FvH4_5g16791 FvH4_5g29700 FvH4_5g35881 FvH4_5g37061 FvH4_6g01571 FvH4_6g12761 FvH4_6g14961 FvH4_6g20381 FvH4_6g22001 FvH4_6g23673 FvH4_6g23960 FvH4_6g28051 FvH4_6g31094 FvH4_6g36541 FvH4_7g00911 FvH4_7g06200 FvH4_7g06200 FvH4_7g09551
malus_domestica MD08G1230600.v1.1
prunus_persica Prupe.1G206900_v2.0.a1 Prupe.1G206900_v2.0.a1 Prupe.1G206900_v2.0.a1
pyrus_communis pycom08g20050 pycom15g37590
rosa_chinensis RchiOBHm_Chr1g0333831 RchiOBHm_Chr1g0344871 RchiOBHm_Chr3g0473241 RchiOBHm_Chr5g0018871 RchiOBHm_Chr6g0265791
rosa_laevigata RLG00000005720 RLG00000012718 RLG00000027174 RLG00000029225 RLG00000029527
rosa_multiflora Rmu_co8002714.1_g000001 Rmu_co8072270.1_g000001 Rmu_co8095594.1_g000001 Rmu_co8308871.1_g000001 Rmu_co8398699.1_g000001 Rmu_co8404287.1_g000001 Rmu_sc0000035.1_g000010 Rmu_sc0000133.1_g000007 Rmu_sc0000253.1_g000023 Rmu_sc0000308.1_g000010 Rmu_sc0000309.1_g000030 Rmu_sc0000515.1_g000015 Rmu_sc0000865.1_g000001 Rmu_sc0000889.1_g000005 Rmu_sc0001262.1_g000011 Rmu_sc0001518.1_g000013 Rmu_sc0001533.1_g000006 Rmu_sc0001547.1_g000007 Rmu_sc0001826.1_g000013 Rmu_sc0002060.1_g000017 Rmu_sc0002129.1_g000005 Rmu_sc0002449.1_g000016 Rmu_sc0002460.1_g000036 Rmu_sc0002475.1_g000014 Rmu_sc0002553.1_g000017 Rmu_sc0002759.1_g000033 Rmu_sc0002918.1_g000009 Rmu_sc0002955.1_g000020 Rmu_sc0003094.1_g000010 Rmu_sc0003669.1_g000009 Rmu_sc0004109.1_g000008 Rmu_sc0004350.1_g000007 Rmu_sc0004542.1_g000018 Rmu_sc0004967.1_g000005 Rmu_sc0005026.1_g000005 Rmu_sc0005369.1_g000013 Rmu_sc0005400.1_g000025 Rmu_sc0005420.1_g000006 Rmu_sc0005467.1_g000013 Rmu_sc0005497.1_g000003 Rmu_sc0005607.1_g000023 Rmu_sc0005949.1_g000008 Rmu_sc0005970.1_g000002 Rmu_sc0006452.1_g000001 Rmu_sc0006720.1_g000008 Rmu_sc0006867.1_g000004 Rmu_sc0007177.1_g000006 Rmu_sc0007199.1_g000011 Rmu_sc0007783.1_g000004 Rmu_sc0007885.1_g000006 Rmu_sc0008619.1_g000001 Rmu_sc0008709.1_g000004 Rmu_sc0008709.1_g000005 Rmu_sc0009185.1_g000029 Rmu_sc0010244.1_g000010 Rmu_sc0011610.1_g000005 Rmu_sc0011680.1_g000013 Rmu_sc0012075.1_g000003 Rmu_sc0012278.1_g000001 Rmu_sc0012628.1_g000001 Rmu_sc0018485.1_g000006 Rmu_sc0019960.1_g000001 Rmu_sc0020177.1_g000002 Rmu_sc0020656.1_g000001 Rmu_sc0021333.1_g000003 Rmu_sc0023170.1_g000002 Rmu_sc0023989.1_g000005 Rmu_sc0025259.1_g000001 Rmu_sc0025350.1_g000013 Rmu_sc0029678.1_g000002 Rmu_sc0035939.1_g000001 Rmu_sc0039260.1_g000001 Rmu_sc0039886.1_g000001 Rmu_ssc0000323.1_g000030 Rmu_ssc0000333.1_g000005 Rmu_ssc0000471.1_g000017 Rmu_ssc0000480.1_g000025
rosa_roxburghii Rroxscaffold_1G00006060 Rroxscaffold_1G00048570 Rroxscaffold_1G00057650 Rroxscaffold_1G00072720 Rroxscaffold_4G00281190 Rroxscaffold_4G00317160 Rroxscaffold_6G00411570
rosa_rugosa Rorug01G0004800 Rorug01G0112100 Rorug01G0206100 Rorug02G0324000 Rorug05G0305600 Rorug05G0326800 Rorug06G0018900 Rorug06G0167000 Rorug07G0031200 Rorug07G0071900
rosa_samantha Rh1AG134700 Rh1BG103000 Rh1CG007300 Rh1CG128100 Rh1DG140100 Rh2DG579500 Rh3DG199000 Rh4BG252500 Rh5AG374900 Rh5BG146800 Rh5BG151500 Rh5DG399700
rosa_wichuraiana Rw0G001820 Rw1G011230 Rw1G011240 Rw1G027290 Rw2G011670 Rw2G039270 Rw6G018440 Rw6G023120 Rw7G025180

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 46
AatII GACGTC 1 cut(s) 483
Acc36I ACCTGC 1 cut(s) 516
AccBSI CCGCTC 1 cut(s) 671
AccIII TCCGGA 1 cut(s) 177
AciI CCGC 6 cut(s) 158, 185, 605, 669, 735, 963
AclWI GGATC 2 cut(s) 431, 459
AcsI RAATTY 1 cut(s) 794
AcyI GRCGYC 1 cut(s) 480
AdeI CACNNNGTG 1 cut(s) 236
AfaI GTAC 1 cut(s) 597
AfeI AGCGCT 1 cut(s) 489
AfiI CCNNNNNNNGG 9 cut(s) 130, 184, 232, 346, 571, 639, 686, 725, 790
AflIII ACRYGT 1 cut(s) 149
AgsI TTSAA 2 cut(s) 362, 945
AjnI CCWGG 1 cut(s) 311
AjuI GAANNNNNNNTTGG 2 cut(s) 95, 127
AloI GAACNNNNNNTCC 2 cut(s) 321, 353
AluBI AGCT 3 cut(s) 407, 638, 986
AluI AGCT 3 cut(s) 407, 638, 986
Alw26I GTCTC 2 cut(s) 196, 578
AlwI GGATC 2 cut(s) 431, 459
Aor13HI TCCGGA 1 cut(s) 177
Aor51HI AGCGCT 1 cut(s) 489
AoxI GGCC 2 cut(s) 863, 956
ApeKI GCWGC 4 cut(s) 490, 522, 556, 772
ApoI RAATTY 1 cut(s) 794
ArsI GACNNNNNNTTYG 2 cut(s) 798, 830
AspLEI GCGC 3 cut(s) 490, 522, 536
AspS9I GGNCC 5 cut(s) 223, 296, 715, 956, 1005
AsuC2I CCSGG 3 cut(s) 99, 761, 1003
AsuHPI GGTGA 4 cut(s) 74, 199, 248, 832
AsuII TTCGAA 1 cut(s) 804
AvaII GGWCC 4 cut(s) 223, 296, 715, 1005
AxyI CCTNAGG 2 cut(s) 566, 720
BauI CACGAG 1 cut(s) 867
BbvI GCAGC 4 cut(s) 477, 509, 568, 784
BccI CCATC 3 cut(s) 437, 719, 947
BciT130I CCWGG 1 cut(s) 313
BciVI GTATCC 1 cut(s) 318
BcnI CCSGG 3 cut(s) 99, 761, 1003
BcoDI GTCTC 2 cut(s) 196, 578
BfaI CTAG 6 cut(s) 408, 419, 485, 515, 639, 960
BfmI CTRYAG 1 cut(s) 523
BfoI RGCGCY 2 cut(s) 491, 523
BfuAI ACCTGC 1 cut(s) 516
BfuI GTATCC 1 cut(s) 318
BisI GCNGC 4 cut(s) 491, 523, 557, 773
BlsI GCNGC 4 cut(s) 492, 524, 558, 774
Bme1390I CCNGG 4 cut(s) 99, 313, 761, 1003
Bme18I GGWCC 4 cut(s) 223, 296, 715, 1005
BmgT120I GGNCC 5 cut(s) 223, 296, 715, 956, 1005
BmiI GGNNCC 4 cut(s) 96, 330, 664, 717
BmrFI CCNGG 4 cut(s) 99, 313, 761, 1003
BmsI GCATC 2 cut(s) 551, 653
BpmI CTGGAG 1 cut(s) 620
Bpu14I TTCGAA 1 cut(s) 804
BpuEI CTTGAG 2 cut(s) 38, 74
BpuMI CCSGG 3 cut(s) 99, 761, 1003
Bsa29I ATCGAT 1 cut(s) 194
BsaHI GRCGYC 1 cut(s) 480
BsaJI CCNNGG 6 cut(s) 98, 299, 311, 312, 784, 930
BsaWI WCCGGW 4 cut(s) 177, 339, 439, 679
BsaXI ACNNNNNCTCC 2 cut(s) 563, 593
Bsc4I CCNNNNNNNGG 9 cut(s) 130, 184, 232, 346, 571, 639, 686, 725, 790
Bse118I RCCGGY 1 cut(s) 898
Bse1I ACTGG 2 cut(s) 71, 603
Bse21I CCTNAGG 2 cut(s) 566, 720
BseAI TCCGGA 1 cut(s) 177
BseBI CCWGG 1 cut(s) 313
BseCI ATCGAT 1 cut(s) 194
BseDI CCNNGG 6 cut(s) 98, 299, 311, 312, 784, 930
BseGI GGATG 4 cut(s) 277, 580, 730, 958
BseLI CCNNNNNNNGG 9 cut(s) 130, 184, 232, 346, 571, 639, 686, 725, 790
BseMII CTCAG 1 cut(s) 711
BseNI ACTGG 2 cut(s) 71, 603
BseRI GAGGAG 1 cut(s) 725
BseXI GCAGC 4 cut(s) 477, 509, 568, 784
BseYI CCCAGC 1 cut(s) 396
BsgI GTGCAG 2 cut(s) 575, 636
BshFI GGCC 2 cut(s) 865, 958
BshVI ATCGAT 1 cut(s) 194
BslFI GGGAC 1 cut(s) 367
BslI CCNNNNNNNGG 9 cut(s) 130, 184, 232, 346, 571, 639, 686, 725, 790
BsmAI GTCTC 2 cut(s) 196, 578
BsmFI GGGAC 1 cut(s) 367
BsnI GGCC 2 cut(s) 865, 958
Bsp119I TTCGAA 1 cut(s) 804
Bsp13I TCCGGA 1 cut(s) 177
Bsp143I GATC 5 cut(s) 191, 238, 379, 436, 451
Bsp19I CCATGG 2 cut(s) 299, 930
BspACI CCGC 6 cut(s) 158, 185, 605, 669, 735, 963
BspANI GGCC 2 cut(s) 865, 958
BspCNI CTCAG 1 cut(s) 712
BspDI ATCGAT 1 cut(s) 194
BspEI TCCGGA 1 cut(s) 177
BspHI TCATGA 1 cut(s) 262
BspLI GGNNCC 4 cut(s) 96, 330, 664, 717
BspMAI CTGCAG 1 cut(s) 527
BspMI ACCTGC 1 cut(s) 516
BspPI GGATC 2 cut(s) 431, 459
BspT104I TTCGAA 1 cut(s) 804
BsrBI CCGCTC 1 cut(s) 671
BsrFI RCCGGY 1 cut(s) 898
BsrI ACTGG 2 cut(s) 71, 603
BssAI RCCGGY 1 cut(s) 898
BssECI CCNNGG 6 cut(s) 98, 299, 311, 312, 784, 930
BssMI GATC 5 cut(s) 191, 238, 379, 436, 451
BssNI GRCGYC 1 cut(s) 480
BssSI CACGAG 1 cut(s) 867
BssT1I CCWWGG 3 cut(s) 299, 784, 930
Bst2BI CACGAG 1 cut(s) 867
Bst2UI CCWGG 1 cut(s) 313
Bst4CI ACNGT 2 cut(s) 28, 337
Bst6I CTCTTC 1 cut(s) 357
BstACI GRCGYC 1 cut(s) 480
BstAPI GCANNNNNTGC 1 cut(s) 531
BstBI TTCGAA 1 cut(s) 804
BstC8I GCNNGC 4 cut(s) 36, 118, 896, 900
BstDEI CTNAG 3 cut(s) 566, 657, 720
BstDSI CCRYGG 2 cut(s) 299, 930
BstENI CCTNNNNNAGG 1 cut(s) 569
BstF5I GGATG 4 cut(s) 277, 580, 730, 958
BstH2I RGCGCY 2 cut(s) 491, 523
BstHHI GCGC 3 cut(s) 490, 522, 536
BstKTI GATC 5 cut(s) 194, 241, 382, 439, 454
BstMAI GTCTC 2 cut(s) 196, 578
BstMBI GATC 5 cut(s) 191, 238, 379, 436, 451
BstMWI GCNNNNNNNGC 2 cut(s) 517, 531
BstNI CCWGG 1 cut(s) 313
BstNSI RCATGY 1 cut(s) 153
BstSCI CCNGG 4 cut(s) 97, 311, 759, 1001
BstSFI CTRYAG 1 cut(s) 523
BstV1I GCAGC 4 cut(s) 477, 509, 568, 784
Bsu15I ATCGAT 1 cut(s) 194
Bsu36I CCTNAGG 2 cut(s) 566, 720
BsuI GTATCC 1 cut(s) 318
BsuRI GGCC 2 cut(s) 865, 958
BsuTUI ATCGAT 1 cut(s) 194
BtgI CCRYGG 2 cut(s) 299, 930
BtgZI GCGATG 2 cut(s) 574, 630
BtsCI GGATG 4 cut(s) 277, 580, 730, 958
BtsI GCAGTG 1 cut(s) 909
BtsIMutI CAGTG 2 cut(s) 78, 909
BveI ACCTGC 1 cut(s) 516
Cac8I GCNNGC 4 cut(s) 36, 118, 896, 900
CciI TCATGA 1 cut(s) 262
CfoI GCGC 3 cut(s) 490, 522, 536
Cfr10I RCCGGY 1 cut(s) 898
Cfr13I GGNCC 5 cut(s) 223, 296, 715, 956, 1005
ClaI ATCGAT 1 cut(s) 194
CseI GACGC 1 cut(s) 683
Csp6I GTAC 1 cut(s) 596
CviAII CATG 7 cut(s) 22, 150, 263, 300, 548, 931, 971
CviQI GTAC 1 cut(s) 596
DdeI CTNAG 3 cut(s) 566, 657, 720
DpnI GATC 5 cut(s) 193, 240, 381, 438, 453
DpnII GATC 5 cut(s) 191, 238, 379, 436, 451
DraIII CACNNNGTG 1 cut(s) 236
DrdI GACNNNNNNGTC 1 cut(s) 46
DseDI GACNNNNNNGTC 1 cut(s) 46
Eam1104I CTCTTC 1 cut(s) 357
EarI CTCTTC 1 cut(s) 357
Eco130I CCWWGG 3 cut(s) 299, 784, 930
Eco147I AGGCCT 1 cut(s) 865
Eco47I GGWCC 4 cut(s) 223, 296, 715, 1005
Eco47III AGCGCT 1 cut(s) 489
Eco81I CCTNAGG 2 cut(s) 566, 720
EcoNI CCTNNNNNAGG 1 cut(s) 569
EcoO109I RGGNCCY 1 cut(s) 715
EcoRII CCWGG 1 cut(s) 311
EcoT14I CCWWGG 3 cut(s) 299, 784, 930
ErhI CCWWGG 3 cut(s) 299, 784, 930
FaeI CATG 7 cut(s) 25, 153, 266, 303, 551, 934, 974
FaqI GGGAC 1 cut(s) 367
FatI CATG 7 cut(s) 21, 149, 262, 299, 547, 930, 970
FauI CCCGC 1 cut(s) 598
Fnu4HI GCNGC 4 cut(s) 491, 523, 557, 773
FokI GGATG 4 cut(s) 284, 587, 737, 965
Fsp4HI GCNGC 4 cut(s) 491, 523, 557, 773
FspBI CTAG 6 cut(s) 408, 419, 485, 515, 639, 960
GlaI GCGC 3 cut(s) 489, 521, 535
GluI GCNGC 4 cut(s) 491, 523, 557, 773
GsaI CCCAGC 1 cut(s) 400
GsuI CTGGAG 1 cut(s) 620
HaeII RGCGCY 2 cut(s) 491, 523
HaeIII GGCC 2 cut(s) 865, 958
HgaI GACGC 1 cut(s) 683
HhaI GCGC 3 cut(s) 490, 522, 536
Hin1I GRCGYC 1 cut(s) 480
Hin1II CATG 7 cut(s) 25, 153, 266, 303, 551, 934, 974
Hin6I GCGC 3 cut(s) 488, 520, 534
HinP1I GCGC 3 cut(s) 488, 520, 534
HindIII AAGCTT 1 cut(s) 984
HinfI GANTC 6 cut(s) 170, 411, 495, 544, 620, 926
HphI GGTGA 4 cut(s) 74, 199, 248, 832
Hpy166II GTNNAC 5 cut(s) 252, 258, 627, 701, 740
Hpy188I TCNGA 1 cut(s) 583
Hpy188III TCNNGA 3 cut(s) 178, 263, 633
Hpy8I GTNNAC 5 cut(s) 252, 258, 627, 701, 740
Hpy99I CGWCG 2 cut(s) 482, 699
HpyAV CCTTC 6 cut(s) 53, 97, 283, 700, 800, 850
HpyCH4III ACNGT 2 cut(s) 28, 337
HpyCH4IV ACGT 2 cut(s) 254, 480
HpyCH4V TGCA 6 cut(s) 278, 525, 556, 617, 772, 970
HpyF10VI GCNNNNNNNGC 2 cut(s) 517, 531
HpyF3I CTNAG 3 cut(s) 566, 657, 720
HpySE526I ACGT 2 cut(s) 254, 480
Hsp92I GRCGYC 1 cut(s) 480
Hsp92II CATG 7 cut(s) 25, 153, 266, 303, 551, 934, 974
HspAI GCGC 3 cut(s) 488, 520, 534
Kpn2I TCCGGA 1 cut(s) 177
KroI GCCGGC 1 cut(s) 898
KroNI GCCGGC 1 cut(s) 900
Kzo9I GATC 5 cut(s) 191, 238, 379, 436, 451
Lsp1109I GCAGC 4 cut(s) 477, 509, 568, 784
LweI GCATC 2 cut(s) 551, 653
MaeI CTAG 6 cut(s) 408, 419, 485, 515, 639, 960
MaeII ACGT 2 cut(s) 254, 480
MalI GATC 5 cut(s) 193, 240, 381, 438, 453
MbiI CCGCTC 1 cut(s) 671
MboI GATC 5 cut(s) 191, 238, 379, 436, 451
MboII GAAGA 3 cut(s) 77, 374, 865
MfeI CAATTG 1 cut(s) 945
MluCI AATT 4 cut(s) 44, 794, 945, 1009
MlyI GAGTC 1 cut(s) 420
MmeI TCCRAC 4 cut(s) 147, 250, 561, 960
MroI TCCGGA 1 cut(s) 177
MroNI GCCGGC 1 cut(s) 898
MseI TTAA 3 cut(s) 144, 840, 888
MspR9I CCNGG 4 cut(s) 99, 313, 761, 1003
MunI CAATTG 1 cut(s) 945
MvaI CCWGG 1 cut(s) 313
MwoI GCNNNNNNNGC 2 cut(s) 517, 531
NaeI GCCGGC 1 cut(s) 900
NciI CCSGG 3 cut(s) 99, 761, 1003
NcoI CCATGG 2 cut(s) 299, 930
NdeII GATC 5 cut(s) 191, 238, 379, 436, 451
NgoMIV GCCGGC 1 cut(s) 898
NlaIII CATG 7 cut(s) 25, 153, 266, 303, 551, 934, 974
NlaIV GGNNCC 4 cut(s) 96, 330, 664, 717
NspI RCATGY 1 cut(s) 153
NspV TTCGAA 1 cut(s) 804
PagI TCATGA 1 cut(s) 262
PasI CCCWGGG 1 cut(s) 312
PceI AGGCCT 1 cut(s) 865
PciI ACATGT 1 cut(s) 149
PdiI GCCGGC 1 cut(s) 900
PfeI GAWTC 5 cut(s) 170, 495, 544, 620, 926
PfoI TCCNGGA 1 cut(s) 759
PkrI GCNGC 4 cut(s) 492, 524, 558, 774
PleI GAGTC 1 cut(s) 419
PpsI GAGTC 1 cut(s) 419
PpuMI RGGWCCY 1 cut(s) 715
PscI ACATGT 1 cut(s) 149
Psp5II RGGWCCY 1 cut(s) 715
Psp6I CCWGG 1 cut(s) 311
PspFI CCCAGC 1 cut(s) 396
PspGI CCWGG 1 cut(s) 311
PspN4I GGNNCC 4 cut(s) 96, 330, 664, 717
PspPI GGNCC 5 cut(s) 223, 296, 715, 956, 1005
PspPPI RGGWCCY 1 cut(s) 715
PstI CTGCAG 1 cut(s) 527
RsaI GTAC 1 cut(s) 597
RsaNI GTAC 1 cut(s) 596
SaqAI TTAA 3 cut(s) 144, 840, 888
SatI GCNGC 4 cut(s) 491, 523, 557, 773
Sau3AI GATC 5 cut(s) 191, 238, 379, 436, 451
Sau96I GGNCC 5 cut(s) 223, 296, 715, 956, 1005
SchI GAGTC 1 cut(s) 420
ScrFI CCNGG 4 cut(s) 99, 313, 761, 1003
SfaNI GCATC 2 cut(s) 551, 653
SfcI CTRYAG 1 cut(s) 523
SfuI TTCGAA 1 cut(s) 804
SinI GGWCC 4 cut(s) 223, 296, 715, 1005
SmlI CTYRAG 2 cut(s) 53, 89
SmoI CTYRAG 2 cut(s) 53, 89
Sse9I AATT 4 cut(s) 44, 794, 945, 1009
SseBI AGGCCT 1 cut(s) 865
SsiI CCGC 6 cut(s) 158, 185, 605, 669, 735, 963
SspMI CTAG 6 cut(s) 408, 419, 485, 515, 639, 960
StuI AGGCCT 1 cut(s) 865
StyD4I CCNGG 4 cut(s) 97, 311, 759, 1001
StyI CCWWGG 3 cut(s) 299, 784, 930
TaaI ACNGT 2 cut(s) 28, 337
TaiI ACGT 2 cut(s) 257, 483
TaqI TCGA 3 cut(s) 194, 477, 804
TasI AATT 4 cut(s) 44, 794, 945, 1009
TfiI GAWTC 5 cut(s) 170, 495, 544, 620, 926
Tru1I TTAA 3 cut(s) 144, 840, 888
Tru9I TTAA 3 cut(s) 144, 840, 888
TscAI CASTG 2 cut(s) 78, 909
TseI GCWGC 4 cut(s) 490, 522, 556, 772
TspDTI ATGAA 2 cut(s) 162, 279
TspGWI ACGGA 1 cut(s) 341
TspRI CASTG 2 cut(s) 78, 909
VpaK11BI GGWCC 4 cut(s) 223, 296, 715, 1005
XagI CCTNNNNNAGG 1 cut(s) 569
XapI RAATTY 1 cut(s) 794
XceI RCATGY 1 cut(s) 153
XspI CTAG 6 cut(s) 408, 419, 485, 515, 639, 960
ZraI GACGTC 1 cut(s) 481
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.