Rmu_sc0007199.1_g000011

Ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0007199.1
OG0000172
Physical Location & Seq
Forward (+)
53324 .. 54517
1194 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0007199.1_g000011.1.cds

Sequence Viewer

Length: 1194 bp
atggctgctgctattgcttccatgactgccaggctagcgaccaagttgtcgctcagggagggtgaagaacttgtggatttggggaaccttagggttcctgggaaggaattcctctctcgtcatttttacttggtggggaaacttaatacctgtagggcggtggtgttggactctttccggagtgcggtgagatctatgtggagactgacgggggcagtggaggtccaatcacggggtggccgatttctgtttacgttcatccatgaacgtgatgttgctcgtgtgaagaagggaggtccgtggggcttccaacgtgccatgatattgttgaatgattatgatggtttctcagagatcccggctgtaaagcttgattttgtttggatctgggttgagctccaaggtatttcaccaggtatcttgacggaacccacagtccggctggtgggaggaatgattggagaggtgttggaagtggaccgtgtggccctgcgtcgtggagaagctcgggttcaactcatcttgtccataaacgacccggtacgcctggatcgcagagttagggtttcccctgttgatgttcttactttgcggttcaagtatgagagacttctggggcggtgcaggctgtgcgccctgctgaatcatggtgggcagagatgccctagggaggatgaggtggaggctgcttctgtggtcgaggaaggcttgccgcaggcaccgggcccggctctccccgccctcgtgtttaaggctaactcccagccttctccttccctgctttcgactttcgaggtacccaacgtgctgaagaagaaacaggtgcagatacggcctcttccggctcccgtgcctttgcctggttctgaaggttcttctgtggctcctgtggttggtgttcggcgtcctagagaagaggaggactctgaggagggtaaacgggctagacatggtctagctcttattccggctactctgcaaccagaaaatttagggctggcattttcctctgatggtctaatggaggtgaaggtatcatcgccgcccaaggtctacaagaagaggggcaggcctcggggacatagaaacaaggtcaaggcggcggcgtctctatgtgaaggctcggagtccatggctcttatgcatggtgggcatgagggggcagtggctttgcttgcttcccagtccgagtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00230 ko00670 ko01100 ko01110 ko01130 ko01523 map00230 map00670 map01100 map01110 map01130 map01523
Pfam Domains
Protein Families
DDE_Tnp_1_7 DUF4283 RVT_1 RVT_3 zf-CCHC_4 zf-RVT

Protein Analysis

397

Amino Acids

43.46

Weight (kDa)

9.65

Isoelectric Point (pI)

54.98

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000172)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G59650 AT3G59650
fragaria_vesca FvH4_1g19981 FvH4_1g22221 FvH4_2g13530 FvH4_2g13791 FvH4_2g14332 FvH4_2g14911 FvH4_2g16332 FvH4_3g10980 FvH4_3g11141 FvH4_3g14171 FvH4_3g26311 FvH4_3g28254 FvH4_3g29741 FvH4_4g05261 FvH4_4g12002 FvH4_4g13371 FvH4_4g15541 FvH4_4g18531 FvH4_5g02661 FvH4_5g02662 FvH4_5g16791 FvH4_5g29700 FvH4_5g35881 FvH4_5g37061 FvH4_6g01571 FvH4_6g12761 FvH4_6g14961 FvH4_6g20381 FvH4_6g22001 FvH4_6g23673 FvH4_6g23960 FvH4_6g28051 FvH4_6g31094 FvH4_6g36541 FvH4_7g00911 FvH4_7g06200 FvH4_7g06200 FvH4_7g09551
malus_domestica MD08G1230600.v1.1
prunus_persica Prupe.1G206900_v2.0.a1 Prupe.1G206900_v2.0.a1 Prupe.1G206900_v2.0.a1
pyrus_communis pycom08g20050 pycom15g37590
rosa_chinensis RchiOBHm_Chr1g0333831 RchiOBHm_Chr1g0344871 RchiOBHm_Chr3g0473241 RchiOBHm_Chr5g0018871 RchiOBHm_Chr6g0265791
rosa_laevigata RLG00000005720 RLG00000012718 RLG00000027174 RLG00000029225 RLG00000029527
rosa_multiflora Rmu_co8002714.1_g000001 Rmu_co8072270.1_g000001 Rmu_co8095594.1_g000001 Rmu_co8308871.1_g000001 Rmu_co8398699.1_g000001 Rmu_co8404287.1_g000001 Rmu_sc0000035.1_g000010 Rmu_sc0000133.1_g000007 Rmu_sc0000253.1_g000023 Rmu_sc0000308.1_g000010 Rmu_sc0000309.1_g000030 Rmu_sc0000515.1_g000015 Rmu_sc0000865.1_g000001 Rmu_sc0000889.1_g000005 Rmu_sc0001262.1_g000011 Rmu_sc0001518.1_g000013 Rmu_sc0001533.1_g000006 Rmu_sc0001547.1_g000007 Rmu_sc0001826.1_g000013 Rmu_sc0002060.1_g000017 Rmu_sc0002129.1_g000005 Rmu_sc0002449.1_g000016 Rmu_sc0002460.1_g000036 Rmu_sc0002475.1_g000014 Rmu_sc0002553.1_g000017 Rmu_sc0002759.1_g000033 Rmu_sc0002918.1_g000009 Rmu_sc0002955.1_g000020 Rmu_sc0003094.1_g000010 Rmu_sc0003669.1_g000009 Rmu_sc0004109.1_g000008 Rmu_sc0004350.1_g000007 Rmu_sc0004542.1_g000018 Rmu_sc0004967.1_g000005 Rmu_sc0005026.1_g000005 Rmu_sc0005369.1_g000013 Rmu_sc0005400.1_g000025 Rmu_sc0005420.1_g000006 Rmu_sc0005467.1_g000013 Rmu_sc0005497.1_g000003 Rmu_sc0005607.1_g000023 Rmu_sc0005949.1_g000008 Rmu_sc0005970.1_g000002 Rmu_sc0006452.1_g000001 Rmu_sc0006720.1_g000008 Rmu_sc0006867.1_g000004 Rmu_sc0007177.1_g000006 Rmu_sc0007199.1_g000011 Rmu_sc0007783.1_g000004 Rmu_sc0007885.1_g000006 Rmu_sc0008619.1_g000001 Rmu_sc0008709.1_g000004 Rmu_sc0008709.1_g000005 Rmu_sc0009185.1_g000029 Rmu_sc0010244.1_g000010 Rmu_sc0011610.1_g000005 Rmu_sc0011680.1_g000013 Rmu_sc0012075.1_g000003 Rmu_sc0012278.1_g000001 Rmu_sc0012628.1_g000001 Rmu_sc0018485.1_g000006 Rmu_sc0019960.1_g000001 Rmu_sc0020177.1_g000002 Rmu_sc0020656.1_g000001 Rmu_sc0021333.1_g000003 Rmu_sc0023170.1_g000002 Rmu_sc0023989.1_g000005 Rmu_sc0025259.1_g000001 Rmu_sc0025350.1_g000013 Rmu_sc0029678.1_g000002 Rmu_sc0035939.1_g000001 Rmu_sc0039260.1_g000001 Rmu_sc0039886.1_g000001 Rmu_ssc0000323.1_g000030 Rmu_ssc0000333.1_g000005 Rmu_ssc0000471.1_g000017 Rmu_ssc0000480.1_g000025
rosa_roxburghii Rroxscaffold_1G00006060 Rroxscaffold_1G00048570 Rroxscaffold_1G00057650 Rroxscaffold_1G00072720 Rroxscaffold_4G00281190 Rroxscaffold_4G00317160 Rroxscaffold_6G00411570
rosa_rugosa Rorug01G0004800 Rorug01G0112100 Rorug01G0206100 Rorug02G0324000 Rorug05G0305600 Rorug05G0326800 Rorug06G0018900 Rorug06G0167000 Rorug07G0031200 Rorug07G0071900
rosa_samantha Rh1AG134700 Rh1BG103000 Rh1CG007300 Rh1CG128100 Rh1DG140100 Rh2DG579500 Rh3DG199000 Rh4BG252500 Rh5AG374900 Rh5BG146800 Rh5BG151500 Rh5DG399700
rosa_wichuraiana Rw0G001820 Rw1G011230 Rw1G011240 Rw1G027290 Rw2G011670 Rw2G039270 Rw6G018440 Rw6G023120 Rw7G025180

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 46
Acc65I GGTACC 1 cut(s) 796
AccB1I GGYRCC 2 cut(s) 718, 796
AccI GTMKAC 1 cut(s) 1053
AccIII TCCGGA 1 cut(s) 177
AciI CCGC 9 cut(s) 158, 185, 592, 619, 713, 738, 1043, 1100, 1103
AclWI GGATC 3 cut(s) 349, 392, 558
AcoI YGGCCR 1 cut(s) 238
AcsI RAATTY 2 cut(s) 107, 988
AcuI CTGAAG 2 cut(s) 830, 888
AcyI GRCGYC 2 cut(s) 904, 1106
AdeI CACNNNGTG 1 cut(s) 236
AfaI GTAC 2 cut(s) 543, 798
AfiI CCNNNNNNNGG 7 cut(s) 184, 232, 438, 445, 670, 860, 893
AgsI TTSAA 3 cut(s) 331, 515, 598
AjnI CCWGG 5 cut(s) 29, 97, 412, 546, 859
AloI GAACNNNNNNTCC 2 cut(s) 420, 452
AluBI AGCT 4 cut(s) 370, 397, 506, 959
AluI AGCT 4 cut(s) 370, 397, 506, 959
Alw21I GWGCWC 1 cut(s) 399
Alw26I GTCTC 3 cut(s) 196, 601, 1113
AlwI GGATC 3 cut(s) 349, 392, 558
Ama87I CYCGRG 2 cut(s) 507, 1074
Aor13HI TCCGGA 1 cut(s) 177
AoxI GGCC 5 cut(s) 238, 486, 724, 833, 1070
ApaI GGGCCC 1 cut(s) 728
ApeKI GCWGC 3 cut(s) 5, 8, 686
ApoI RAATTY 2 cut(s) 107, 988
Asp700I GAANNNNTTC 1 cut(s) 107
Asp718I GGTACC 1 cut(s) 796
AspA2I CCTAGG 1 cut(s) 665
AspLEI GCGC 1 cut(s) 635
AspS9I GGNCC 6 cut(s) 223, 296, 478, 487, 724, 725
AsuC2I CCSGG 4 cut(s) 359, 539, 723, 728
AsuHPI GGTGA 4 cut(s) 74, 199, 402, 1039
AsuNHI GCTAGC 1 cut(s) 34
AvaI CYCGRG 2 cut(s) 507, 1074
AvaII GGWCC 3 cut(s) 223, 296, 478
AvrII CCTAGG 1 cut(s) 665
AxyI CCTNAGG 1 cut(s) 89
BaeGI GKGCMC 1 cut(s) 728
BanI GGYRCC 2 cut(s) 718, 796
BanII GRGCYC 2 cut(s) 399, 728
BauI CACGAG 2 cut(s) 279, 743
Bbv12I GWGCWC 1 cut(s) 399
BbvI GCAGC 1 cut(s) 673
BccI CCATC 2 cut(s) 335, 1007
BceAI ACGGC 1 cut(s) 848
BciT130I CCWGG 5 cut(s) 31, 99, 414, 548, 861
BcnI CCSGG 4 cut(s) 359, 539, 723, 728
BcoDI GTCTC 3 cut(s) 196, 601, 1113
BfaI CTAG 5 cut(s) 35, 666, 909, 945, 956
BfmI CTRYAG 1 cut(s) 151
BglII AGATCT 1 cut(s) 191
BisI GCNGC 7 cut(s) 6, 9, 687, 713, 1043, 1101, 1104
BlnI CCTAGG 1 cut(s) 665
BlsI GCNGC 7 cut(s) 7, 10, 688, 714, 1044, 1102, 1105
Bme1390I CCNGG 9 cut(s) 31, 99, 359, 414, 539, 548, 723, 728, 861
Bme18I GGWCC 3 cut(s) 223, 296, 478
BmeT110I CYCGRG 2 cut(s) 507, 1074
BmgT120I GGNCC 6 cut(s) 223, 296, 478, 487, 724, 725
BmiI GGNNCC 8 cut(s) 86, 96, 429, 720, 726, 798, 846, 885
BmrFI CCNGG 9 cut(s) 31, 99, 359, 414, 539, 548, 723, 728, 861
BmrI ACTGGG 1 cut(s) 1177
BmsI GCATC 1 cut(s) 650
BmtI GCTAGC 1 cut(s) 38
BmuI ACTGGG 1 cut(s) 1177
BplI GAGNNNNNCTC 2 cut(s) 908, 940
Bpu10I CCTNAGC 1 cut(s) 53
BpuMI CCSGG 4 cut(s) 359, 539, 723, 728
BsaHI GRCGYC 2 cut(s) 904, 1106
BsaJI CCNNGG 7 cut(s) 98, 299, 400, 665, 1047, 1073, 1131
BsaWI WCCGGW 1 cut(s) 177
Bsc4I CCNNNNNNNGG 7 cut(s) 184, 232, 438, 445, 670, 860, 893
Bse1I ACTGG 1 cut(s) 1183
Bse21I CCTNAGG 1 cut(s) 89
BseAI TCCGGA 1 cut(s) 177
BseBI CCWGG 5 cut(s) 31, 99, 414, 548, 861
BseDI CCNNGG 7 cut(s) 98, 299, 400, 665, 1047, 1073, 1131
BseGI GGATG 2 cut(s) 258, 679
BseLI CCNNNNNNNGG 7 cut(s) 184, 232, 438, 445, 670, 860, 893
BseMII CTCAG 3 cut(s) 67, 363, 918
BseNI ACTGG 1 cut(s) 1183
BseRI GAGGAG 2 cut(s) 932, 944
BseSI GKGCMC 1 cut(s) 728
BseXI GCAGC 1 cut(s) 673
BseYI CCCAGC 1 cut(s) 762
BsgI GTGCAG 2 cut(s) 643, 845
BshFI GGCC 5 cut(s) 240, 488, 726, 835, 1072
BshNI GGYRCC 2 cut(s) 718, 796
BsiHKAI GWGCWC 1 cut(s) 399
BsiHKCI CYCGRG 2 cut(s) 507, 1074
BsiSI CCGG 8 cut(s) 178, 359, 439, 539, 722, 728, 842, 968
BslFI GGGAC 1 cut(s) 1092
BslI CCNNNNNNNGG 7 cut(s) 184, 232, 438, 445, 670, 860, 893
BsmAI GTCTC 3 cut(s) 196, 601, 1113
BsmBI CGTCTC 1 cut(s) 1113
BsmFI GGGAC 1 cut(s) 1092
BsnI GGCC 5 cut(s) 240, 488, 726, 835, 1072
BsoBI CYCGRG 2 cut(s) 507, 1074
Bsp120I GGGCCC 1 cut(s) 724
Bsp1286I GDGCHC 2 cut(s) 399, 728
Bsp13I TCCGGA 1 cut(s) 177
Bsp143I GATC 4 cut(s) 191, 354, 384, 550
Bsp19I CCATGG 1 cut(s) 1131
BspACI CCGC 9 cut(s) 158, 185, 592, 619, 713, 738, 1043, 1100, 1103
BspANI GGCC 5 cut(s) 240, 488, 726, 835, 1072
BspCNI CTCAG 3 cut(s) 66, 362, 919
BspEI TCCGGA 1 cut(s) 177
BspLI GGNNCC 8 cut(s) 86, 96, 429, 720, 726, 798, 846, 885
BspOI GCTAGC 1 cut(s) 38
BspPI GGATC 3 cut(s) 349, 392, 558
BspT107I GGYRCC 2 cut(s) 718, 796
BsrI ACTGG 1 cut(s) 1183
BssECI CCNNGG 7 cut(s) 98, 299, 400, 665, 1047, 1073, 1131
BssMI GATC 4 cut(s) 191, 354, 384, 550
BssNI GRCGYC 2 cut(s) 904, 1106
BssSI CACGAG 2 cut(s) 279, 743
BssT1I CCWWGG 4 cut(s) 400, 665, 1047, 1131
Bst2BI CACGAG 2 cut(s) 279, 743
Bst2UI CCWGG 5 cut(s) 31, 99, 414, 548, 861
Bst4CI ACNGT 2 cut(s) 436, 482
Bst6I CTCTTC 3 cut(s) 843, 909, 1055
BstACI GRCGYC 2 cut(s) 904, 1106
BstAPI GCANNNNNTGC 1 cut(s) 630
BstC8I GCNNGC 7 cut(s) 36, 626, 710, 717, 999, 1070, 1176
BstDEI CTNAG 4 cut(s) 53, 89, 349, 927
BstDSI CCRYGG 2 cut(s) 299, 1131
BstF5I GGATG 2 cut(s) 258, 679
BstHHI GCGC 1 cut(s) 635
BstKTI GATC 4 cut(s) 194, 357, 387, 553
BstMAI GTCTC 3 cut(s) 196, 601, 1113
BstMBI GATC 4 cut(s) 191, 354, 384, 550
BstMWI GCNNNNNNNGC 9 cut(s) 14, 35, 552, 625, 630, 737, 832, 1150, 1175
BstNI CCWGG 5 cut(s) 31, 99, 414, 548, 861
BstSCI CCNGG 9 cut(s) 29, 97, 357, 412, 537, 546, 721, 726, 859
BstSFI CTRYAG 1 cut(s) 151
BstSLI GKGCMC 1 cut(s) 728
BstV1I GCAGC 1 cut(s) 673
BstX2I RGATCY 3 cut(s) 191, 354, 384
BstYI RGATCY 3 cut(s) 191, 354, 384
Bsu36I CCTNAGG 1 cut(s) 89
BsuRI GGCC 5 cut(s) 240, 488, 726, 835, 1072
BtgI CCRYGG 2 cut(s) 299, 1131
BtgZI GCGATG 1 cut(s) 1023
BtsCI GGATG 2 cut(s) 258, 679
BtsI GCAGTG 2 cut(s) 222, 1170
BtsIMutI CAGTG 2 cut(s) 222, 1170
Cac8I GCNNGC 7 cut(s) 36, 626, 710, 717, 999, 1070, 1176
CfoI GCGC 1 cut(s) 635
Cfr13I GGNCC 6 cut(s) 223, 296, 478, 487, 724, 725
CseI GACGC 3 cut(s) 482, 893, 1095
CsiI ACCWGGT 1 cut(s) 412
Csp6I GTAC 2 cut(s) 542, 797
CviAII CATG 8 cut(s) 22, 263, 319, 647, 950, 1132, 1145, 1154
CviQI GTAC 2 cut(s) 542, 797
DdeI CTNAG 4 cut(s) 53, 89, 349, 927
DpnI GATC 4 cut(s) 193, 356, 386, 552
DpnII GATC 4 cut(s) 191, 354, 384, 550
DraIII CACNNNGTG 1 cut(s) 236
DrdI GACNNNNNNGTC 1 cut(s) 46
DseDI GACNNNNNNGTC 1 cut(s) 46
EaeI YGGCCR 1 cut(s) 238
Eam1104I CTCTTC 3 cut(s) 843, 909, 1055
EarI CTCTTC 3 cut(s) 843, 909, 1055
Ecl136II GAGCTC 1 cut(s) 397
Eco130I CCWWGG 4 cut(s) 400, 665, 1047, 1131
Eco147I AGGCCT 1 cut(s) 1072
Eco24I GRGCYC 2 cut(s) 399, 728
Eco47I GGWCC 3 cut(s) 223, 296, 478
Eco53kI GAGCTC 1 cut(s) 397
Eco57I CTGAAG 2 cut(s) 830, 888
Eco81I CCTNAGG 1 cut(s) 89
Eco88I CYCGRG 2 cut(s) 507, 1074
EcoICRI GAGCTC 1 cut(s) 397
EcoRI GAATTC 1 cut(s) 107
EcoRII CCWGG 5 cut(s) 29, 97, 412, 546, 859
EcoT14I CCWWGG 4 cut(s) 400, 665, 1047, 1131
EcoT22I ATGCAT 1 cut(s) 1146
EcoT38I GRGCYC 2 cut(s) 399, 728
ErhI CCWWGG 4 cut(s) 400, 665, 1047, 1131
Esp3I CGTCTC 1 cut(s) 1113
FaeI CATG 8 cut(s) 25, 266, 322, 650, 953, 1135, 1148, 1157
FaqI GGGAC 1 cut(s) 1092
FatI CATG 8 cut(s) 21, 262, 318, 646, 949, 1131, 1144, 1153
FauI CCCGC 1 cut(s) 745
FblI GTMKAC 1 cut(s) 1053
Fnu4HI GCNGC 7 cut(s) 6, 9, 687, 713, 1043, 1101, 1104
FokI GGATG 2 cut(s) 245, 686
FriOI GRGCYC 2 cut(s) 399, 728
Fsp4HI GCNGC 7 cut(s) 6, 9, 687, 713, 1043, 1101, 1104
FspBI CTAG 5 cut(s) 35, 666, 909, 945, 956
GlaI GCGC 1 cut(s) 634
GluI GCNGC 7 cut(s) 6, 9, 687, 713, 1043, 1101, 1104
GsaI CCCAGC 1 cut(s) 766
HaeIII GGCC 5 cut(s) 240, 488, 726, 835, 1072
HapII CCGG 8 cut(s) 178, 359, 439, 539, 722, 728, 842, 968
HgaI GACGC 3 cut(s) 482, 893, 1095
HhaI GCGC 1 cut(s) 635
Hin1I GRCGYC 2 cut(s) 904, 1106
Hin1II CATG 8 cut(s) 25, 266, 322, 650, 953, 1135, 1148, 1157
Hin6I GCGC 1 cut(s) 633
HinP1I GCGC 1 cut(s) 633
HindIII AAGCTT 1 cut(s) 368
HinfI GANTC 4 cut(s) 170, 643, 923, 1127
HpaII CCGG 8 cut(s) 178, 359, 439, 539, 722, 728, 842, 968
HphI GGTGA 4 cut(s) 74, 199, 402, 1039
Hpy166II GTNNAC 4 cut(s) 252, 478, 938, 1054
Hpy188I TCNGA 6 cut(s) 352, 868, 928, 1012, 1126, 1189
Hpy188III TCNNGA 2 cut(s) 178, 421
Hpy8I GTNNAC 4 cut(s) 252, 478, 938, 1054
Hpy99I CGWCG 1 cut(s) 498
HpyAV CCTTC 8 cut(s) 97, 283, 698, 777, 783, 863, 1024, 1112
HpyCH4III ACNGT 2 cut(s) 436, 482
HpyCH4IV ACGT 4 cut(s) 254, 268, 313, 804
HpyCH4V TGCA 4 cut(s) 624, 826, 979, 1144
HpyF10VI GCNNNNNNNGC 9 cut(s) 14, 35, 552, 625, 630, 737, 832, 1150, 1175
HpyF3I CTNAG 4 cut(s) 53, 89, 349, 927
HpySE526I ACGT 4 cut(s) 254, 268, 313, 804
Hsp92I GRCGYC 2 cut(s) 904, 1106
Hsp92II CATG 8 cut(s) 25, 266, 322, 650, 953, 1135, 1148, 1157
HspAI GCGC 1 cut(s) 633
Kpn2I TCCGGA 1 cut(s) 177
KpnI GGTACC 1 cut(s) 800
Kzo9I GATC 4 cut(s) 191, 354, 384, 550
LmnI GCTCC 3 cut(s) 402, 850, 889
Lsp1109I GCAGC 1 cut(s) 673
LweI GCATC 1 cut(s) 650
MabI ACCWGGT 1 cut(s) 412
MaeI CTAG 5 cut(s) 35, 666, 909, 945, 956
MaeII ACGT 4 cut(s) 254, 268, 313, 804
MalI GATC 4 cut(s) 193, 356, 386, 552
MboI GATC 4 cut(s) 191, 354, 384, 550
MboII GAAGA 8 cut(s) 77, 298, 823, 826, 830, 867, 926, 1072
MflI RGATCY 3 cut(s) 191, 354, 384
MhlI GDGCHC 2 cut(s) 399, 728
MluCI AATT 2 cut(s) 107, 988
MlyI GAGTC 3 cut(s) 164, 917, 1136
MmeI TCCRAC 3 cut(s) 147, 334, 450
Mph1103I ATGCAT 1 cut(s) 1146
MroI TCCGGA 1 cut(s) 177
MroXI GAANNNNTTC 1 cut(s) 107
MseI TTAA 2 cut(s) 144, 750
MslI CAYNNNNRTG 1 cut(s) 267
MspI CCGG 8 cut(s) 178, 359, 439, 539, 722, 728, 842, 968
MspR9I CCNGG 9 cut(s) 31, 99, 359, 414, 539, 548, 723, 728, 861
MvaI CCWGG 5 cut(s) 31, 99, 414, 548, 861
MwoI GCNNNNNNNGC 9 cut(s) 14, 35, 552, 625, 630, 737, 832, 1150, 1175
NciI CCSGG 4 cut(s) 359, 539, 723, 728
NcoI CCATGG 1 cut(s) 1131
NdeII GATC 4 cut(s) 191, 354, 384, 550
NheI GCTAGC 1 cut(s) 34
NlaIII CATG 8 cut(s) 25, 266, 322, 650, 953, 1135, 1148, 1157
NlaIV GGNNCC 8 cut(s) 86, 96, 429, 720, 726, 798, 846, 885
NsiI ATGCAT 1 cut(s) 1146
PceI AGGCCT 1 cut(s) 1072
PcsI WCGNNNNNNNCGW 1 cut(s) 238
PdmI GAANNNNTTC 1 cut(s) 107
PfeI GAWTC 1 cut(s) 643
PflFI GACNNNGTC 1 cut(s) 951
PkrI GCNGC 7 cut(s) 7, 10, 688, 714, 1044, 1102, 1105
PleI GAGTC 3 cut(s) 164, 917, 1135
PpsI GAGTC 3 cut(s) 164, 917, 1135
Psp124BI GAGCTC 1 cut(s) 399
Psp6I CCWGG 5 cut(s) 29, 97, 412, 546, 859
PspFI CCCAGC 1 cut(s) 762
PspGI CCWGG 5 cut(s) 29, 97, 412, 546, 859
PspN4I GGNNCC 8 cut(s) 86, 96, 429, 720, 726, 798, 846, 885
PspOMI GGGCCC 1 cut(s) 724
PspPI GGNCC 6 cut(s) 223, 296, 478, 487, 724, 725
PsuI RGATCY 3 cut(s) 191, 354, 384
PsyI GACNNNGTC 1 cut(s) 951
RsaI GTAC 2 cut(s) 543, 798
RsaNI GTAC 2 cut(s) 542, 797
RseI CAYNNNNRTG 1 cut(s) 267
SacI GAGCTC 1 cut(s) 399
SaqAI TTAA 2 cut(s) 144, 750
SatI GCNGC 7 cut(s) 6, 9, 687, 713, 1043, 1101, 1104
Sau3AI GATC 4 cut(s) 191, 354, 384, 550
Sau96I GGNCC 6 cut(s) 223, 296, 478, 487, 724, 725
SchI GAGTC 3 cut(s) 164, 917, 1136
ScrFI CCNGG 9 cut(s) 31, 99, 359, 414, 539, 548, 723, 728, 861
SduI GDGCHC 2 cut(s) 399, 728
SexAI ACCWGGT 1 cut(s) 412
SfaNI GCATC 1 cut(s) 650
SfcI CTRYAG 1 cut(s) 151
SinI GGWCC 3 cut(s) 223, 296, 478
SmiMI CAYNNNNRTG 1 cut(s) 267
Sse9I AATT 2 cut(s) 107, 988
SseBI AGGCCT 1 cut(s) 1072
SsiI CCGC 9 cut(s) 158, 185, 592, 619, 713, 738, 1043, 1100, 1103
SspMI CTAG 5 cut(s) 35, 666, 909, 945, 956
SstI GAGCTC 1 cut(s) 399
StuI AGGCCT 1 cut(s) 1072
StyD4I CCNGG 9 cut(s) 29, 97, 357, 412, 537, 546, 721, 726, 859
StyI CCWWGG 4 cut(s) 400, 665, 1047, 1131
TaaI ACNGT 2 cut(s) 436, 482
TaiI ACGT 4 cut(s) 257, 271, 316, 807
TaqI TCGA 3 cut(s) 699, 785, 792
TasI AATT 2 cut(s) 107, 988
TauI GCSGC 4 cut(s) 715, 1045, 1103, 1106
TfiI GAWTC 1 cut(s) 643
Tru1I TTAA 2 cut(s) 144, 750
Tru9I TTAA 2 cut(s) 144, 750
TscAI CASTG 2 cut(s) 222, 1170
TseI GCWGC 3 cut(s) 5, 8, 686
TspDTI ATGAA 2 cut(s) 247, 279
TspGWI ACGGA 2 cut(s) 288, 440
TspRI CASTG 2 cut(s) 222, 1170
Tth111I GACNNNGTC 1 cut(s) 951
VpaK11BI GGWCC 3 cut(s) 223, 296, 478
XapI RAATTY 2 cut(s) 107, 988
XcmI CCANNNNNNNNNTGG 2 cut(s) 233, 439
XmaJI CCTAGG 1 cut(s) 665
XmiI GTMKAC 1 cut(s) 1053
XmnI GAANNNNTTC 1 cut(s) 107
XspI CTAG 5 cut(s) 35, 666, 909, 945, 956
Zsp2I ATGCAT 1 cut(s) 1146
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.