Rorug05G0305600

Ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0000172
Physical Location & Seq
Forward (+)
35614112 .. 35615569
1458 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0305600.1

Sequence Viewer

Length: 1299 bp
ATGAAGAAGATCAGCTCCTTCCTCACCTATAAAAGGTTCTCTCTTCTCTCCTCATTAATTACGCATTTAATACTTACCTATTGGTACTTTGTCAACATAAATACATTGACTAACTTAGGCATCGGAGAAGAGAAGACCGCCCAACGCGGTCTCTCTCTGACGCCCTCTGTATTTCACTTGACAGGTAGCGGAAGCTCTGAGAATATCACAAGTAGCGGTCCGCCCATCGGACCAGCGTTAACAAAGAAGATACTCTCTATTCCTCTTAGCCCCCGGAATCATGAGGACAGGTGGATTTGGGGCGGTGACAAGAGAGGTCAGTTCACAGTTAAATCGGCTTATCACGTAGCCCGGAATCGGATCCTTAATGATGATCCATCACATGCACCTAACCCAAGTGCCGCCCTTTGGCGTCAGTTGTGGAAAGCTCCAGTTCCAAGCAATGTGAAGATTTGTGCATGGAAAGCAGCTTCTAATGTTCTTCCTACTCGGAGCAGGCTAAGTGAACGCGGTATTGATCTTGATACCCAATGCCCACTCTGTGATGAAGAGGTTGAGACTCCTATTCATGCAGTTCGTGATTTCCCCCATGCGACTAGTTTGATTCAGGGTGCTAATCTTCCTTTAATTTCGGCCCCTACAAGTGTTGCAAAATGGCTCATGTCAGTTCCTATGTCAAACTCTCAAATTTTTGTTTCTTCCTTGATGATTTTATGGGCCACTTGGAGAAATAGGAATGCCAAAGTTTGGGAGGGAGATTTTAAGCACGCTTCACAAATTGTTCCCATGGCCTTGGGTTGGCTAGAGGAATATAAGGCAGCTCATCGCACTAACCAGTCGGGGTTGGGTGCTAGATCCTCTCCTAAGTGGAAAAAACCTCCAGCTGGTTTTGTGAAATTGAATGTTGACGCAGCTTTTGATCAGGCATTGGGTCGTTCGGGTTTGGGTGGGGTGTTCAGAGACCATGAAGGATCTTTTCTTCATAGATTTCGACATTCCATAACAATCGCTCTATCAGCTCGACATGCGGAGCTTTTAGCTTTGTTGATGGGGCTATATCGATCTTCTTCTTCTTTGGATATGTCGGACCTTGGTTTTCTGCTAGCAGACCTACGGGATCAGCAGATCCCACTGGATGCTTGTGTTGTTAAGGTTGGAAGACAGGCCAACGGGGTGGCACACACTTTGGCTCAGGAAGGAAAGTTTACTGATTTTCATATGGATTTCTTTTCTTGTATTCCTTTGTCTGTGGAGGATAGATTAATCTCTGATTGTAATGATGCTCAATCAATGAATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00230 ko00670 ko01100 ko01110 ko01130 ko01523 map00230 map00670 map01100 map01110 map01130 map01523
Pfam Domains
Protein Families
DDE_Tnp_1_7 DUF4283 RVT_1 RVT_3 zf-CCHC_4 zf-RVT

Protein Analysis

432

Amino Acids

47.84

Weight (kDa)

9.25

Isoelectric Point (pI)

44.9

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-RVT PF13966 108 - 194 6.8e-14 zinc-binding in reverse transcriptase
RVT_3 PF13456 301 - 352 1.1e-06 Reverse transcriptase-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000172)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G59650 AT3G59650
fragaria_vesca FvH4_1g19981 FvH4_1g22221 FvH4_2g13530 FvH4_2g13791 FvH4_2g14332 FvH4_2g14911 FvH4_2g16332 FvH4_3g10980 FvH4_3g11141 FvH4_3g14171 FvH4_3g26311 FvH4_3g28254 FvH4_3g29741 FvH4_4g05261 FvH4_4g12002 FvH4_4g13371 FvH4_4g15541 FvH4_4g18531 FvH4_5g02661 FvH4_5g02662 FvH4_5g16791 FvH4_5g29700 FvH4_5g35881 FvH4_5g37061 FvH4_6g01571 FvH4_6g12761 FvH4_6g14961 FvH4_6g20381 FvH4_6g22001 FvH4_6g23673 FvH4_6g23960 FvH4_6g28051 FvH4_6g31094 FvH4_6g36541 FvH4_7g00911 FvH4_7g06200 FvH4_7g06200 FvH4_7g09551
malus_domestica MD08G1230600.v1.1
prunus_persica Prupe.1G206900_v2.0.a1 Prupe.1G206900_v2.0.a1 Prupe.1G206900_v2.0.a1
pyrus_communis pycom08g20050 pycom15g37590
rosa_chinensis RchiOBHm_Chr1g0333831 RchiOBHm_Chr1g0344871 RchiOBHm_Chr3g0473241 RchiOBHm_Chr5g0018871 RchiOBHm_Chr6g0265791
rosa_laevigata RLG00000005720 RLG00000012718 RLG00000027174 RLG00000029225 RLG00000029527
rosa_multiflora Rmu_co8002714.1_g000001 Rmu_co8072270.1_g000001 Rmu_co8095594.1_g000001 Rmu_co8308871.1_g000001 Rmu_co8398699.1_g000001 Rmu_co8404287.1_g000001 Rmu_sc0000035.1_g000010 Rmu_sc0000133.1_g000007 Rmu_sc0000253.1_g000023 Rmu_sc0000308.1_g000010 Rmu_sc0000309.1_g000030 Rmu_sc0000515.1_g000015 Rmu_sc0000865.1_g000001 Rmu_sc0000889.1_g000005 Rmu_sc0001262.1_g000011 Rmu_sc0001518.1_g000013 Rmu_sc0001533.1_g000006 Rmu_sc0001547.1_g000007 Rmu_sc0001826.1_g000013 Rmu_sc0002060.1_g000017 Rmu_sc0002129.1_g000005 Rmu_sc0002449.1_g000016 Rmu_sc0002460.1_g000036 Rmu_sc0002475.1_g000014 Rmu_sc0002553.1_g000017 Rmu_sc0002759.1_g000033 Rmu_sc0002918.1_g000009 Rmu_sc0002955.1_g000020 Rmu_sc0003094.1_g000010 Rmu_sc0003669.1_g000009 Rmu_sc0004109.1_g000008 Rmu_sc0004350.1_g000007 Rmu_sc0004542.1_g000018 Rmu_sc0004967.1_g000005 Rmu_sc0005026.1_g000005 Rmu_sc0005369.1_g000013 Rmu_sc0005400.1_g000025 Rmu_sc0005420.1_g000006 Rmu_sc0005467.1_g000013 Rmu_sc0005497.1_g000003 Rmu_sc0005607.1_g000023 Rmu_sc0005949.1_g000008 Rmu_sc0005970.1_g000002 Rmu_sc0006452.1_g000001 Rmu_sc0006720.1_g000008 Rmu_sc0006867.1_g000004 Rmu_sc0007177.1_g000006 Rmu_sc0007199.1_g000011 Rmu_sc0007783.1_g000004 Rmu_sc0007885.1_g000006 Rmu_sc0008619.1_g000001 Rmu_sc0008709.1_g000004 Rmu_sc0008709.1_g000005 Rmu_sc0009185.1_g000029 Rmu_sc0010244.1_g000010 Rmu_sc0011610.1_g000005 Rmu_sc0011680.1_g000013 Rmu_sc0012075.1_g000003 Rmu_sc0012278.1_g000001 Rmu_sc0012628.1_g000001 Rmu_sc0018485.1_g000006 Rmu_sc0019960.1_g000001 Rmu_sc0020177.1_g000002 Rmu_sc0020656.1_g000001 Rmu_sc0021333.1_g000003 Rmu_sc0023170.1_g000002 Rmu_sc0023989.1_g000005 Rmu_sc0025259.1_g000001 Rmu_sc0025350.1_g000013 Rmu_sc0029678.1_g000002 Rmu_sc0035939.1_g000001 Rmu_sc0039260.1_g000001 Rmu_sc0039886.1_g000001 Rmu_ssc0000323.1_g000030 Rmu_ssc0000333.1_g000005 Rmu_ssc0000471.1_g000017 Rmu_ssc0000480.1_g000025
rosa_roxburghii Rroxscaffold_1G00006060 Rroxscaffold_1G00048570 Rroxscaffold_1G00057650 Rroxscaffold_1G00072720 Rroxscaffold_4G00281190 Rroxscaffold_4G00317160 Rroxscaffold_6G00411570
rosa_rugosa Rorug01G0004800 Rorug01G0112100 Rorug01G0206100 Rorug02G0324000 Rorug05G0305600 Rorug05G0326800 Rorug06G0018900 Rorug06G0167000 Rorug07G0031200 Rorug07G0071900
rosa_samantha Rh1AG134700 Rh1BG103000 Rh1CG007300 Rh1CG128100 Rh1DG140100 Rh2DG579500 Rh3DG199000 Rh4BG252500 Rh5AG374900 Rh5BG146800 Rh5BG151500 Rh5DG399700
rosa_wichuraiana Rw0G001820 Rw1G011230 Rw1G011240 Rw1G027290 Rw2G011670 Rw2G039270 Rw6G018440 Rw6G023120 Rw7G025180

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 747
AccII CGCG 2 cut(s) 147, 510
AciI CCGC 9 cut(s) 138, 147, 189, 216, 221, 303, 402, 510, 1028
AclWI GGATC 7 cut(s) 355, 368, 368, 849, 979, 1120, 1125
AcsI RAATTY 1 cut(s) 687
AcyI GRCGYC 2 cut(s) 161, 412
AdeI CACNNNGTG 1 cut(s) 542
AfaI GTAC 1 cut(s) 86
AfiI CCNNNNNNNGG 7 cut(s) 33, 227, 357, 408, 747, 798, 884
AgsI TTSAA 1 cut(s) 901
AhlI ACTAGT 1 cut(s) 596
Alw26I GTCTC 3 cut(s) 155, 551, 954
AlwI GGATC 7 cut(s) 355, 368, 368, 849, 979, 1120, 1125
AoxI GGCC 4 cut(s) 633, 717, 789, 1164
ApeKI GCWGC 3 cut(s) 467, 818, 911
ApoI RAATTY 1 cut(s) 687
ArsI GACNNNNNNTTYG 2 cut(s) 899, 931
AseI ATTAAT 2 cut(s) 56, 1262
AspS9I GGNCC 5 cut(s) 218, 230, 634, 717, 1087
AsuC2I CCSGG 2 cut(s) 274, 352
AsuHPI GGTGA 2 cut(s) 16, 317
AsuNHI GCTAGC 1 cut(s) 1102
AvaII GGWCC 3 cut(s) 218, 230, 1087
BamHI GGATCC 1 cut(s) 360
BbsI GAAGAC 2 cut(s) 140, 1165
BbvI GCAGC 3 cut(s) 479, 830, 923
BccI CCATC 3 cut(s) 233, 385, 1042
BclI TGATCA 1 cut(s) 919
BcnI CCSGG 2 cut(s) 274, 352
BcoDI GTCTC 3 cut(s) 155, 551, 954
BcuI ACTAGT 1 cut(s) 596
BfaI CTAG 4 cut(s) 597, 803, 852, 1103
BisI GCNGC 4 cut(s) 402, 468, 819, 912
BlsI GCNGC 4 cut(s) 403, 469, 820, 913
Bme1390I CCNGG 2 cut(s) 274, 352
Bme18I GGWCC 3 cut(s) 218, 230, 1087
BmgT120I GGNCC 5 cut(s) 218, 230, 634, 717, 1087
BmiI GGNNCC 2 cut(s) 362, 636
BmrFI CCNGG 2 cut(s) 274, 352
BmsI GCATC 3 cut(s) 129, 1126, 1270
BmtI GCTAGC 1 cut(s) 1106
BpiI GAAGAC 2 cut(s) 140, 1165
BpmI CTGGAG 2 cut(s) 414, 864
Bpu10I CCTNAGC 1 cut(s) 1191
BpuMI CCSGG 2 cut(s) 274, 352
Bsa29I ATCGAT 1 cut(s) 1060
BsaAI YACGTR 1 cut(s) 346
BsaHI GRCGYC 2 cut(s) 161, 412
BsaI GGTCTC 2 cut(s) 155, 954
BsaJI CCNNGG 4 cut(s) 272, 786, 792, 1090
Bsc4I CCNNNNNNNGG 7 cut(s) 33, 227, 357, 408, 747, 798, 884
Bse1I ACTGG 3 cut(s) 431, 835, 1137
Bse3DI GCAATG 1 cut(s) 448
BseCI ATCGAT 1 cut(s) 1060
BseDI CCNNGG 4 cut(s) 272, 786, 792, 1090
BseGI GGATG 1 cut(s) 1141
BseLI CCNNNNNNNGG 7 cut(s) 33, 227, 357, 408, 747, 798, 884
BseMI GCAATG 1 cut(s) 448
BseMII CTCAG 2 cut(s) 189, 1205
BseNI ACTGG 3 cut(s) 431, 835, 1137
BseRI GAGGAG 1 cut(s) 40
BseXI GCAGC 3 cut(s) 479, 830, 923
Bsh1236I CGCG 2 cut(s) 147, 510
BshFI GGCC 4 cut(s) 635, 719, 791, 1166
BshVI ATCGAT 1 cut(s) 1060
BsiSI CCGG 2 cut(s) 274, 352
BslI CCNNNNNNNGG 7 cut(s) 33, 227, 357, 408, 747, 798, 884
BsmAI GTCTC 3 cut(s) 155, 551, 954
BsmI GAATGC 1 cut(s) 742
BsnI GGCC 4 cut(s) 635, 719, 791, 1166
Bso31I GGTCTC 2 cut(s) 155, 954
Bsp19I CCATGG 1 cut(s) 786
BspACI CCGC 9 cut(s) 138, 147, 189, 216, 221, 303, 402, 510, 1028
BspANI GGCC 4 cut(s) 635, 719, 791, 1166
BspCNI CTCAG 2 cut(s) 190, 1204
BspDI ATCGAT 1 cut(s) 1060
BspFNI CGCG 2 cut(s) 147, 510
BspHI TCATGA 1 cut(s) 280
BspLI GGNNCC 2 cut(s) 362, 636
BspOI GCTAGC 1 cut(s) 1106
BspPI GGATC 7 cut(s) 355, 368, 368, 849, 979, 1120, 1125
BspTNI GGTCTC 2 cut(s) 155, 954
BsrDI GCAATG 1 cut(s) 448
BsrI ACTGG 3 cut(s) 431, 835, 1137
BssECI CCNNGG 4 cut(s) 272, 786, 792, 1090
BssNI GRCGYC 2 cut(s) 161, 412
BssT1I CCWWGG 3 cut(s) 786, 792, 1090
Bst4CI ACNGT 1 cut(s) 328
Bst6I CTCTTC 3 cut(s) 48, 123, 543
BstACI GRCGYC 2 cut(s) 161, 412
BstBAI YACGTR 1 cut(s) 346
BstC8I GCNNGC 3 cut(s) 497, 768, 1104
BstDEI CTNAG 6 cut(s) 115, 198, 266, 500, 864, 1191
BstDSI CCRYGG 1 cut(s) 786
BstENI CCTNNNNNAGG 1 cut(s) 31
BstF5I GGATG 1 cut(s) 1141
BstFNI CGCG 2 cut(s) 147, 510
BstMAI GTCTC 3 cut(s) 155, 551, 954
BstMWI GCNNNNNNNGC 3 cut(s) 464, 1016, 1025
BstNSI RCATGY 2 cut(s) 386, 1028
BstSCI CCNGG 2 cut(s) 272, 350
BstUI CGCG 2 cut(s) 147, 510
BstV1I GCAGC 3 cut(s) 479, 830, 923
BstV2I GAAGAC 2 cut(s) 140, 1165
BstX2I RGATCY 4 cut(s) 360, 854, 971, 1125
BstXI CCANNNNNNTGG 2 cut(s) 793, 1174
BstYI RGATCY 4 cut(s) 360, 854, 971, 1125
Bsu15I ATCGAT 1 cut(s) 1060
BsuRI GGCC 4 cut(s) 635, 719, 791, 1166
BsuTUI ATCGAT 1 cut(s) 1060
BtgI CCRYGG 1 cut(s) 786
BtgZI GCGATG 1 cut(s) 809
BtsCI GGATG 1 cut(s) 1141
BtsIMutI CAGTG 1 cut(s) 1130
Cac8I GCNNGC 3 cut(s) 497, 768, 1104
CciI TCATGA 1 cut(s) 280
Cfr13I GGNCC 5 cut(s) 218, 230, 634, 717, 1087
ClaI ATCGAT 1 cut(s) 1060
CpoI CGGWCCG 1 cut(s) 218
CseI GACGC 3 cut(s) 169, 401, 917
Csp6I GTAC 1 cut(s) 85
CspI CGGWCCG 1 cut(s) 218
CviAII CATG 9 cut(s) 281, 383, 459, 569, 590, 661, 787, 965, 1025
CviQI GTAC 1 cut(s) 85
DdeI CTNAG 6 cut(s) 115, 198, 266, 500, 864, 1191
DraIII CACNNNGTG 1 cut(s) 542
Eam1104I CTCTTC 3 cut(s) 48, 123, 543
EarI CTCTTC 3 cut(s) 48, 123, 543
EciI GGCGGA 1 cut(s) 210
Eco130I CCWWGG 3 cut(s) 786, 792, 1090
Eco31I GGTCTC 2 cut(s) 155, 954
Eco47I GGWCC 3 cut(s) 218, 230, 1087
EcoNI CCTNNNNNAGG 1 cut(s) 31
EcoT14I CCWWGG 3 cut(s) 786, 792, 1090
ErhI CCWWGG 3 cut(s) 786, 792, 1090
FaeI CATG 9 cut(s) 284, 386, 462, 572, 593, 664, 790, 968, 1028
FatI CATG 9 cut(s) 280, 382, 458, 568, 589, 660, 786, 964, 1024
FauNDI CATATG 1 cut(s) 1218
FbaI TGATCA 1 cut(s) 919
Fnu4HI GCNGC 4 cut(s) 402, 468, 819, 912
FokI GGATG 1 cut(s) 1148
Fsp4HI GCNGC 4 cut(s) 402, 468, 819, 912
FspBI CTAG 4 cut(s) 597, 803, 852, 1103
GluI GCNGC 4 cut(s) 402, 468, 819, 912
GsuI CTGGAG 2 cut(s) 414, 864
HaeIII GGCC 4 cut(s) 635, 719, 791, 1166
HapII CCGG 2 cut(s) 274, 352
HgaI GACGC 3 cut(s) 169, 401, 917
Hin1I GRCGYC 2 cut(s) 161, 412
Hin1II CATG 9 cut(s) 284, 386, 462, 572, 593, 664, 790, 968, 1028
HincII GTYRAC 3 cut(s) 94, 240, 907
HindII GTYRAC 3 cut(s) 94, 240, 907
HinfI GANTC 4 cut(s) 277, 355, 559, 604
HpaI GTTAAC 1 cut(s) 240
HpaII CCGG 2 cut(s) 274, 352
HphI GGTGA 2 cut(s) 16, 317
Hpy166II GTNNAC 6 cut(s) 94, 240, 324, 506, 907, 1206
Hpy188I TCNGA 9 cut(s) 125, 159, 199, 230, 360, 492, 959, 1087, 1270
Hpy188III TCNNGA 4 cut(s) 281, 521, 578, 1193
Hpy8I GTNNAC 6 cut(s) 94, 240, 324, 506, 907, 1206
HpyAV CCTTC 3 cut(s) 28, 962, 1190
HpyCH4III ACNGT 1 cut(s) 328
HpyCH4IV ACGT 1 cut(s) 345
HpyCH4V TGCA 4 cut(s) 386, 458, 572, 650
HpyF10VI GCNNNNNNNGC 3 cut(s) 464, 1016, 1025
HpyF3I CTNAG 6 cut(s) 115, 198, 266, 500, 864, 1191
HpySE526I ACGT 1 cut(s) 345
Hsp92I GRCGYC 2 cut(s) 161, 412
Hsp92II CATG 9 cut(s) 284, 386, 462, 572, 593, 664, 790, 968, 1028
Ksp22I TGATCA 1 cut(s) 919
KspAI GTTAAC 1 cut(s) 240
LmnI GCTCC 4 cut(s) 20, 433, 492, 1030
Lsp1109I GCAGC 3 cut(s) 479, 830, 923
LweI GCATC 3 cut(s) 129, 1126, 1270
MaeI CTAG 4 cut(s) 597, 803, 852, 1103
MaeII ACGT 1 cut(s) 345
MaeIII GTNAC 1 cut(s) 305
MflI RGATCY 4 cut(s) 360, 854, 971, 1125
MluCI AATT 6 cut(s) 57, 627, 687, 777, 896, 1294
MlyI GAGTC 1 cut(s) 553
MmeI TCCRAC 2 cut(s) 1065, 1135
MseI TTAA 9 cut(s) 56, 68, 239, 330, 366, 626, 762, 1149, 1262
MspA1I CMGCKG 1 cut(s) 884
MspI CCGG 2 cut(s) 274, 352
MspR9I CCNGG 2 cut(s) 274, 352
Mva1269I GAATGC 1 cut(s) 742
MvnI CGCG 2 cut(s) 147, 510
MwoI GCNNNNNNNGC 3 cut(s) 464, 1016, 1025
NciI CCSGG 2 cut(s) 274, 352
NcoI CCATGG 1 cut(s) 786
NdeI CATATG 1 cut(s) 1218
NheI GCTAGC 1 cut(s) 1102
NlaIII CATG 9 cut(s) 284, 386, 462, 572, 593, 664, 790, 968, 1028
NlaIV GGNNCC 2 cut(s) 362, 636
NmuCI GTSAC 1 cut(s) 305
NspI RCATGY 2 cut(s) 386, 1028
PagI TCATGA 1 cut(s) 280
PctI GAATGC 1 cut(s) 742
PfeI GAWTC 3 cut(s) 277, 355, 604
PflMI CCANNNNNTGG 1 cut(s) 747
PkrI GCNGC 4 cut(s) 403, 469, 820, 913
PleI GAGTC 1 cut(s) 553
PpsI GAGTC 1 cut(s) 553
Ppu21I YACGTR 1 cut(s) 346
PshBI ATTAAT 2 cut(s) 56, 1262
PspN4I GGNNCC 2 cut(s) 362, 636
PspPI GGNCC 5 cut(s) 218, 230, 634, 717, 1087
PsuI RGATCY 4 cut(s) 360, 854, 971, 1125
PvuII CAGCTG 1 cut(s) 884
RsaI GTAC 1 cut(s) 86
RsaNI GTAC 1 cut(s) 85
Rsr2I CGGWCCG 1 cut(s) 218
RsrII CGGWCCG 1 cut(s) 218
SaqAI TTAA 9 cut(s) 56, 68, 239, 330, 366, 626, 762, 1149, 1262
SatI GCNGC 4 cut(s) 402, 468, 819, 912
Sau96I GGNCC 5 cut(s) 218, 230, 634, 717, 1087
SchI GAGTC 1 cut(s) 553
ScrFI CCNGG 2 cut(s) 274, 352
SfaNI GCATC 3 cut(s) 129, 1126, 1270
SinI GGWCC 3 cut(s) 218, 230, 1087
SpeI ACTAGT 1 cut(s) 596
Sse9I AATT 6 cut(s) 57, 627, 687, 777, 896, 1294
SsiI CCGC 9 cut(s) 138, 147, 189, 216, 221, 303, 402, 510, 1028
SspMI CTAG 4 cut(s) 597, 803, 852, 1103
StyD4I CCNGG 2 cut(s) 272, 350
StyI CCWWGG 3 cut(s) 786, 792, 1090
TaaI ACNGT 1 cut(s) 328
TaiI ACGT 1 cut(s) 348
TaqI TCGA 3 cut(s) 991, 1021, 1060
TasI AATT 6 cut(s) 57, 627, 687, 777, 896, 1294
TauI GCSGC 1 cut(s) 404
TfiI GAWTC 3 cut(s) 277, 355, 604
Tru1I TTAA 9 cut(s) 56, 68, 239, 330, 366, 626, 762, 1149, 1262
Tru9I TTAA 9 cut(s) 56, 68, 239, 330, 366, 626, 762, 1149, 1262
TscAI CASTG 1 cut(s) 1137
TseFI GTSAC 1 cut(s) 305
TseI GCWGC 3 cut(s) 467, 818, 911
Tsp45I GTSAC 1 cut(s) 305
TspDTI ATGAA 6 cut(s) 17, 557, 561, 971, 981, 1205
TspRI CASTG 1 cut(s) 1137
Van91I CCANNNNNTGG 1 cut(s) 747
VpaK11BI GGWCC 3 cut(s) 218, 230, 1087
VspI ATTAAT 2 cut(s) 56, 1262
XagI CCTNNNNNAGG 1 cut(s) 31
XapI RAATTY 1 cut(s) 687
XceI RCATGY 2 cut(s) 386, 1028
XspI CTAG 4 cut(s) 597, 803, 852, 1103
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.