Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000007

Orthogroup ID

OG0000172

Physical Location & Seq

Genomic Coordinates Reverse (-)

2158548 .. 2162127

Gene Structure 3580 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug07G0031200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2091 bp

ATGGGTGGTGTTCATGCAATTGGGCTCTTGCTTTGTTCCTTGGTGTTGCTTTTTGATTATTCAATTTCACACCCTCTATGCATTGATTCAAGAGCACCTTCTACTCTGAGCACCCCACTCAAGTTTTGTTCTTACAATGGAACTGCTTGCTGCAACTCCACTGAAGATTCACAGATACAGAAGCAATTCCTGTCCATGAACATCTCTAGTTCTGCTTGTGCTTCTCTCTTGAAACCAGTACTTTGTGCTAGGTGTGATCCATTTGCTGCTGAGCTATTCACAGTTAATTCTGTGCCTAGGCCAGTTCCTATACTATGCAACTCAACTATTTCAGCAAATTCATCCCAGTCTTTAATCCAAGTAACAAGTGACTTTTGCTCTAACTTATGGGACACATGTCAAAATGTGTCCATGTCCAACTCCCCATTTGCTCCTTCATTACAAGGCCAAGCTGGAATACCTGTGAATTCCACTGTTAGTGAGCTAACCCAATTCTGGCAATCAAAAGCCGATTTCTGCAATGCATTTGGTGGAGTTTCTAGTGAGGACTCGGTGTGTTTTGATGGTGAGCCTGTCAAACTGAATGACACTGGAACTCCTATCCCCCCACATGGTTTGTGCCTTGAGAAAATCGGTAATGGATCTTACCTCAACATGGTTGCTCATCCTGATGGCTCAAACCGTGCATTTTTCTCCAGTCAAGAGGGTAAGGTTTGGTTGGCAACTATACCGGAAGAAGGGTCAGGAGAGGCAATGGGGCTTGATGAGTCCAGTCCCTTTGTGGATTTAACTGATCAAGTTCATTTTGATACGGCGTTTGGCATGATGGGTATGGCTTTTCATCCCAATTTTGCACAAAATGGGAGGTTCTATGCTTCATTTAACTGTGACAAGGAGAAGTGGCCAGGATGTACAGGAAGATGTTCATGTAATTCAGATGTCAACTGTGATCCTTCAAAGCTTGGTTCTGATAATGGTGCTCAACCATGCCAGTACCAAACTGTTATAGCAGAATACACTGCTAATGGTACCGCGTCACAACCTTCCTTGGCTACAAGTGCTAAACCATCAGAAGTTAGAAGGATATTTACTATGGGCCTCCCTTTCACAGGTCATCATGCAGGACAGATACTCTTTGGACCGGAGGACGGGTATTTATACTTCATGATGGGAGATGGTGGAGGCACAGGTGATCCCTACAACTTCTCTCAAAACAAGAAATCATTGCTTGGAAAGATTATGAGGCTCGACGTTGATAATGTTCTAAGTGCTTCAGAAATTGATAAACTTGTTCTATGGGGAAACTACTCTATCCCAAAAGACAATCCAGTAAGTGAAGATCCAGAACTGAGGCCAGAAATATGGGCCACAGGGCTAAGAAATCCTTGGCGCTGCAGTTTCGATTCAGAAGAGCCTTCATATTTTATATGTGCAGATGTTGGACAGGATCTGTATGAAGAGGTGGATGTTATCACCAAGGGTGGAAACTATGGCTGGAATGTTTATGAGGGCCCCTATCCTTTCACTCTTCCAAACTCATCTAGTAAAAACACATCCACAAGACTCACAAACCCAATTTTTCCAATAATGGGGTACAACCATTCTGAGGTAAACAAGAAAGAAGGTTCAGCATCTATTACTGGGGGATATATCTATCGCTCCAAAACTGATCCATGCATGTATGGAAGGTATGTATATGGAGATCTGTATGCTGGTGCCATATGGGCTGGCAGTGAAGACCCAGAAAACAGTGGCAACTTTAGCACAAGCAAAATCCCCTTCAGCTGCGGACGTGACTCTCCCATACCTTGTACCTCTGTCCCTGGAAGCAGTCTTCCGGCTCTGGGCTACATTTTCTCATTCGGGGAGGACAACCGCAAAGATATCTTTGTCCTGTCGAGCTCTGGTGTTTATAGAGTTGTTCGTCCTAGTCGCTGTAATTACACTTGCTCCAAGGAAAATGTTACTTCTGTGGCAACCCCAGGTCCTTCTGCTTCACCTAATGATGCTTGCTGGATAAGTAAGCCATCTAAGAGCACAGTGCTCCTAGTCTCTTCTCTGGTACTTCTGCTTCTGCTCAGTTTTGTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005576 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005773 GO:0005829 GO:0005886 GO:0005911 GO:0006950 GO:0006952 GO:0006979 GO:0008150 GO:0008152 GO:0009505 GO:0009506 GO:0009605 GO:0009607 GO:0009620 GO:0016020 GO:0016491 GO:0016614 GO:0016899 GO:0030054 GO:0030312 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0048046 GO:0050832 GO:0050896 GO:0051704 GO:0051707 GO:0055044 GO:0055114 GO:0071944 GO:0098542

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BBE FAD_binding_4

Protein Analysis

696

Amino Acids

75.18

Weight (kDa)

4.86

Isoelectric Point (pI)

41.01

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GSDH	PF07995	228 - 527	2.4e-21	Glucose / Sorbosone dehydrogenase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0000172)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G59650 AT3G59650
fragaria_vesca	FvH4_1g19981 FvH4_1g22221 FvH4_2g13530 FvH4_2g13791 FvH4_2g14332 FvH4_2g14911 FvH4_2g16332 FvH4_3g10980 FvH4_3g11141 FvH4_3g14171 FvH4_3g26311 FvH4_3g28254 FvH4_3g29741 FvH4_4g05261 FvH4_4g12002 FvH4_4g13371 FvH4_4g15541 FvH4_4g18531 FvH4_5g02661 FvH4_5g02662 FvH4_5g16791 FvH4_5g29700 FvH4_5g35881 FvH4_5g37061 FvH4_6g01571 FvH4_6g12761 FvH4_6g14961 FvH4_6g20381 FvH4_6g22001 FvH4_6g23673 FvH4_6g23960 FvH4_6g28051 FvH4_6g31094 FvH4_6g36541 FvH4_7g00911 FvH4_7g06200 FvH4_7g06200 FvH4_7g09551
malus_domestica	MD08G1230600.v1.1
prunus_persica	Prupe.1G206900_v2.0.a1 Prupe.1G206900_v2.0.a1 Prupe.1G206900_v2.0.a1
pyrus_communis	pycom08g20050 pycom15g37590
rosa_chinensis	RchiOBHm_Chr1g0333831 RchiOBHm_Chr1g0344871 RchiOBHm_Chr3g0473241 RchiOBHm_Chr5g0018871 RchiOBHm_Chr6g0265791
rosa_laevigata	RLG00000005720 RLG00000012718 RLG00000027174 RLG00000029225 RLG00000029527
rosa_multiflora	Rmu_co8002714.1_g000001 Rmu_co8072270.1_g000001 Rmu_co8095594.1_g000001 Rmu_co8308871.1_g000001 Rmu_co8398699.1_g000001 Rmu_co8404287.1_g000001 Rmu_sc0000035.1_g000010 Rmu_sc0000133.1_g000007 Rmu_sc0000253.1_g000023 Rmu_sc0000308.1_g000010 Rmu_sc0000309.1_g000030 Rmu_sc0000515.1_g000015 Rmu_sc0000865.1_g000001 Rmu_sc0000889.1_g000005 Rmu_sc0001262.1_g000011 Rmu_sc0001518.1_g000013 Rmu_sc0001533.1_g000006 Rmu_sc0001547.1_g000007 Rmu_sc0001826.1_g000013 Rmu_sc0002060.1_g000017 Rmu_sc0002129.1_g000005 Rmu_sc0002449.1_g000016 Rmu_sc0002460.1_g000036 Rmu_sc0002475.1_g000014 Rmu_sc0002553.1_g000017 Rmu_sc0002759.1_g000033 Rmu_sc0002918.1_g000009 Rmu_sc0002955.1_g000020 Rmu_sc0003094.1_g000010 Rmu_sc0003669.1_g000009 Rmu_sc0004109.1_g000008 Rmu_sc0004350.1_g000007 Rmu_sc0004542.1_g000018 Rmu_sc0004967.1_g000005 Rmu_sc0005026.1_g000005 Rmu_sc0005369.1_g000013 Rmu_sc0005400.1_g000025 Rmu_sc0005420.1_g000006 Rmu_sc0005467.1_g000013 Rmu_sc0005497.1_g000003 Rmu_sc0005607.1_g000023 Rmu_sc0005949.1_g000008 Rmu_sc0005970.1_g000002 Rmu_sc0006452.1_g000001 Rmu_sc0006720.1_g000008 Rmu_sc0006867.1_g000004 Rmu_sc0007177.1_g000006 Rmu_sc0007199.1_g000011 Rmu_sc0007783.1_g000004 Rmu_sc0007885.1_g000006 Rmu_sc0008619.1_g000001 Rmu_sc0008709.1_g000004 Rmu_sc0008709.1_g000005 Rmu_sc0009185.1_g000029 Rmu_sc0010244.1_g000010 Rmu_sc0011610.1_g000005 Rmu_sc0011680.1_g000013 Rmu_sc0012075.1_g000003 Rmu_sc0012278.1_g000001 Rmu_sc0012628.1_g000001 Rmu_sc0018485.1_g000006 Rmu_sc0019960.1_g000001 Rmu_sc0020177.1_g000002 Rmu_sc0020656.1_g000001 Rmu_sc0021333.1_g000003 Rmu_sc0023170.1_g000002 Rmu_sc0023989.1_g000005 Rmu_sc0025259.1_g000001 Rmu_sc0025350.1_g000013 Rmu_sc0029678.1_g000002 Rmu_sc0035939.1_g000001 Rmu_sc0039260.1_g000001 Rmu_sc0039886.1_g000001 Rmu_ssc0000323.1_g000030 Rmu_ssc0000333.1_g000005 Rmu_ssc0000471.1_g000017 Rmu_ssc0000480.1_g000025
rosa_roxburghii	Rroxscaffold_1G00006060 Rroxscaffold_1G00048570 Rroxscaffold_1G00057650 Rroxscaffold_1G00072720 Rroxscaffold_4G00281190 Rroxscaffold_4G00317160 Rroxscaffold_6G00411570
rosa_rugosa	Rorug01G0004800 Rorug01G0112100 Rorug01G0206100 Rorug02G0324000 Rorug05G0305600 Rorug05G0326800 Rorug06G0018900 Rorug06G0167000 Rorug07G0031200 Rorug07G0071900
rosa_samantha	Rh1AG134700 Rh1BG103000 Rh1CG007300 Rh1CG128100 Rh1DG140100 Rh2DG579500 Rh3DG199000 Rh4BG252500 Rh5AG374900 Rh5BG146800 Rh5BG151500 Rh5DG399700
rosa_wichuraiana	Rw0G001820 Rw1G011230 Rw1G011240 Rw1G027290 Rw2G011670 Rw2G039270 Rw6G018440 Rw6G023120 Rw7G025180

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	1028
AccB1I	GGYRCC	2 cut(s)	1028, 1715
AccII	CGCG	1 cut(s)	1034
AciI	CCGC	3 cut(s)	1032, 1788, 1876
AclWI	GGATC	7 cut(s)	251, 649, 944, 1187, 1334, 1455, 1664
AcoI	YGGCCR	1 cut(s)	902
AcsI	RAATTY	2 cut(s)	337, 466
AcuI	CTGAAG	3 cut(s)	183, 1257, 1765
AfaI	GTAC	7 cut(s)	240, 913, 995, 1030, 1595, 1813, 2064
AfiI	CCNNNNNNNGG	9 cut(s)	495, 611, 655, 737, 1109, 1148, 1589, 1606, 1844
AflIII	ACRYGT	1 cut(s)	395
AgsI	TTSAA	4 cut(s)	63, 90, 232, 957
AjiI	CACGTC	1 cut(s)	1793
AjnI	CCWGG	3 cut(s)	904, 1822, 1981
AluBI	AGCT	6 cut(s)	274, 452, 484, 961, 1785, 1902
AluI	AGCT	6 cut(s)	274, 452, 484, 961, 1785, 1902
Alw21I	GWGCWC	6 cut(s)	97, 113, 982, 1904, 2039, 2046
Alw26I	GTCTC	1 cut(s)	2056
AlwI	GGATC	7 cut(s)	251, 649, 944, 1187, 1334, 1455, 1664
AlwNI	CAGNNNCTG	1 cut(s)	1450
AoxI	GGCC	7 cut(s)	299, 445, 902, 1096, 1352, 1365, 1510
ApaI	GGGCCC	1 cut(s)	1514
ApeKI	GCWGC	4 cut(s)	150, 266, 1392, 1785
ApoI	RAATTY	2 cut(s)	337, 466
Asp700I	GAANNNNTTC	2 cut(s)	185, 922
Asp718I	GGTACC	1 cut(s)	1028
AspA2I	CCTAGG	1 cut(s)	296
AspLEI	GCGC	1 cut(s)	1392
AspS9I	GGNCC	6 cut(s)	1096, 1139, 1365, 1510, 1511, 1985
AsuHPI	GGTGA	4 cut(s)	578, 1202, 1465, 1989
AvaII	GGWCC	2 cut(s)	1139, 1985
AvrII	CCTAGG	1 cut(s)	296
BaeGI	GKGCMC	1 cut(s)	1514
BalI	TGGCCA	1 cut(s)	904
BanI	GGYRCC	2 cut(s)	1028, 1715
BanII	GRGCYC	3 cut(s)	27, 1514, 1904
BarI	GAAGNNNNNNTAC	6 cut(s)	1072, 1104, 1145, 1177, 2055, 2087
BbsI	GAAGAC	2 cut(s)	1743, 1826
Bbv12I	GWGCWC	6 cut(s)	97, 113, 982, 1904, 2039, 2046
BbvI	GCAGC	4 cut(s)	137, 253, 1379, 1772
BccI	CCATC	7 cut(s)	557, 665, 820, 1075, 1162, 1169, 2035
BceAI	ACGGC	1 cut(s)	828
BciT130I	CCWGG	3 cut(s)	906, 1824, 1983
BclI	TGATCA	1 cut(s)	793
BcoDI	GTCTC	1 cut(s)	2056
BfaI	CTAG	8 cut(s)	207, 249, 297, 540, 1542, 1929, 2048, 2089
BfmI	CTRYAG	1 cut(s)	1393
BfoI	RGCGCY	1 cut(s)	1393
BglI	GCCNNNNNGGC	1 cut(s)	1724
BglII	AGATCT	1 cut(s)	1702
BisI	GCNGC	4 cut(s)	151, 267, 1393, 1786
BlnI	CCTAGG	1 cut(s)	296
BlpI	GCTNAGC	1 cut(s)	270
BlsI	GCNGC	4 cut(s)	152, 268, 1394, 1787
BmcAI	AGTACT	1 cut(s)	240
Bme1390I	CCNGG	3 cut(s)	906, 1824, 1983
Bme18I	GGWCC	2 cut(s)	1139, 1985
BmgBI	CACGTC	1 cut(s)	1793
BmgT120I	GGNCC	6 cut(s)	1096, 1139, 1365, 1510, 1511, 1985
BmiI	GGNNCC	4 cut(s)	1030, 1512, 1513, 1717
BmrFI	CCNGG	3 cut(s)	906, 1824, 1983
BmrI	ACTGGG	2 cut(s)	340, 1650
BmsI	GCATC	2 cut(s)	1640, 1996
BmuI	ACTGGG	2 cut(s)	340, 1650
BoxI	GACNNNNGTC	1 cut(s)	396
BpiI	GAAGAC	2 cut(s)	1743, 1826
BpmI	CTGGAG	1 cut(s)	679
Bpu1102I	GCTNAGC	1 cut(s)	270
BpuEI	CTTGAG	2 cut(s)	104, 644
BsaJI	CCNNGG	8 cut(s)	39, 296, 1047, 1385, 1476, 1822, 1953, 1981
BsaWI	WCCGGW	2 cut(s)	730, 1141
BsaXI	ACNNNNNCTCC	6 cut(s)	580, 610, 1136, 1166, 1934, 1964
Bsc4I	CCNNNNNNNGG	9 cut(s)	495, 611, 655, 737, 1109, 1148, 1589, 1606, 1844
Bse1I	ACTGG	9 cut(s)	236, 302, 346, 595, 696, 771, 991, 1328, 1645
Bse3DI	GCAATG	3 cut(s)	526, 759, 1223
BseBI	CCWGG	3 cut(s)	906, 1824, 1983
BseDI	CCNNGG	8 cut(s)	39, 296, 1047, 1385, 1476, 1822, 1953, 1981
BseGI	GGATG	6 cut(s)	341, 664, 841, 914, 1471, 1553
BseLI	CCNNNNNNNGG	9 cut(s)	495, 611, 655, 737, 1109, 1148, 1589, 1606, 1844
BseMI	GCAATG	3 cut(s)	526, 759, 1223
BseMII	CTCAG	4 cut(s)	98, 261, 1340, 1596
BseNI	ACTGG	9 cut(s)	236, 302, 346, 595, 696, 771, 991, 1328, 1645
BseSI	GKGCMC	1 cut(s)	1514
BseXI	GCAGC	4 cut(s)	137, 253, 1379, 1772
BsgI	GTGCAG	1 cut(s)	1452
Bsh1236I	CGCG	1 cut(s)	1034
BshFI	GGCC	7 cut(s)	301, 447, 904, 1098, 1354, 1367, 1512
BshNI	GGYRCC	2 cut(s)	1028, 1715
BsiHKAI	GWGCWC	6 cut(s)	97, 113, 982, 1904, 2039, 2046
BsiSI	CCGG	3 cut(s)	731, 1142, 1838
BslFI	GGGAC	3 cut(s)	404, 759, 1805
BslI	CCNNNNNNNGG	9 cut(s)	495, 611, 655, 737, 1109, 1148, 1589, 1606, 1844
BsmAI	GTCTC	1 cut(s)	2056
BsmFI	GGGAC	3 cut(s)	404, 759, 1805
BsnI	GGCC	7 cut(s)	301, 447, 904, 1098, 1354, 1367, 1512
Bsp120I	GGGCCC	1 cut(s)	1510
Bsp1286I	GDGCHC	8 cut(s)	27, 97, 113, 982, 1514, 1904, 2039, 2046
Bsp1407I	TGTACA	1 cut(s)	911
Bsp143I	GATC	9 cut(s)	256, 641, 793, 949, 1192, 1339, 1447, 1669, 1702
Bsp1720I	GCTNAGC	1 cut(s)	270
BspACI	CCGC	3 cut(s)	1032, 1788, 1876
BspANI	GGCC	7 cut(s)	301, 447, 904, 1098, 1354, 1367, 1512
BspCNI	CTCAG	5 cut(s)	99, 262, 1341, 1597, 2091
BspFNI	CGCG	1 cut(s)	1034
BspHI	TCATGA	1 cut(s)	1164
BspLI	GGNNCC	4 cut(s)	1030, 1512, 1513, 1717
BspMAI	CTGCAG	1 cut(s)	1397
BspPI	GGATC	7 cut(s)	251, 649, 944, 1187, 1334, 1455, 1664
BspQI	GCTCTTC	1 cut(s)	1404
BspT107I	GGYRCC	2 cut(s)	1028, 1715
BsrDI	GCAATG	3 cut(s)	526, 759, 1223
BsrGI	TGTACA	1 cut(s)	911
BsrI	ACTGG	9 cut(s)	236, 302, 346, 595, 696, 771, 991, 1328, 1645
BssECI	CCNNGG	8 cut(s)	39, 296, 1047, 1385, 1476, 1822, 1953, 1981
BssMI	GATC	9 cut(s)	256, 641, 793, 949, 1192, 1339, 1447, 1669, 1702
BssT1I	CCWWGG	6 cut(s)	39, 296, 1047, 1385, 1476, 1953
Bst2UI	CCWGG	3 cut(s)	906, 1824, 1983
Bst4CI	ACNGT	8 cut(s)	283, 475, 683, 887, 947, 1003, 1751, 2041
Bst6I	CTCTTC	4 cut(s)	1404, 1452, 1533, 2059
BstAUI	TGTACA	1 cut(s)	911
BstC8I	GCNNGC	3 cut(s)	148, 1729, 2011
BstDEI	CTNAG	8 cut(s)	107, 270, 1265, 1349, 1376, 1605, 2031, 2078
BstENI	CCTNNNNNAGG	1 cut(s)	1107
BstF5I	GGATG	6 cut(s)	341, 664, 841, 914, 1471, 1553
BstFNI	CGCG	1 cut(s)	1034
BstH2I	RGCGCY	1 cut(s)	1393
BstHHI	GCGC	1 cut(s)	1392
BstKTI	GATC	9 cut(s)	259, 644, 796, 952, 1195, 1342, 1450, 1672, 1705
BstMAI	GTCTC	1 cut(s)	2056
BstMBI	GATC	9 cut(s)	256, 641, 793, 949, 1192, 1339, 1447, 1669, 1702
BstMWI	GCNNNNNNNGC	3 cut(s)	1058, 1724, 1761
BstNI	CCWGG	3 cut(s)	906, 1824, 1983
BstNSI	RCATGY	2 cut(s)	399, 1681
BstPAI	GACNNNNGTC	1 cut(s)	396
BstSCI	CCNGG	3 cut(s)	904, 1822, 1981
BstSFI	CTRYAG	1 cut(s)	1393
BstSLI	GKGCMC	1 cut(s)	1514
BstUI	CGCG	1 cut(s)	1034
BstV1I	GCAGC	4 cut(s)	137, 253, 1379, 1772
BstV2I	GAAGAC	2 cut(s)	1743, 1826
BstX2I	RGATCY	4 cut(s)	641, 1339, 1447, 1702
BstXI	CCANNNNNNTGG	1 cut(s)	1362
BstYI	RGATCY	4 cut(s)	641, 1339, 1447, 1702
BsuRI	GGCC	7 cut(s)	301, 447, 904, 1098, 1354, 1367, 1512
BtrI	CACGTC	1 cut(s)	1793
BtsCI	GGATG	6 cut(s)	341, 664, 841, 914, 1471, 1553
BtsI	GCAGTG	2 cut(s)	1017, 1738
BtsIMutI	CAGTG	7 cut(s)	159, 471, 588, 1017, 1738, 1756, 2046
Cac8I	GCNNGC	3 cut(s)	148, 1729, 2011
CaiI	CAGNNNCTG	1 cut(s)	1450
CciI	TCATGA	1 cut(s)	1164
CfoI	GCGC	1 cut(s)	1392
Cfr13I	GGNCC	6 cut(s)	1096, 1139, 1365, 1510, 1511, 1985
CseI	GACGC	1 cut(s)	1023
Csp6I	GTAC	7 cut(s)	239, 912, 994, 1029, 1594, 1812, 2063
CspCI	CAANNNNNGTGG	2 cut(s)	597, 632
CviQI	GTAC	7 cut(s)	239, 912, 994, 1029, 1594, 1812, 2063
DdeI	CTNAG	8 cut(s)	107, 270, 1265, 1349, 1376, 1605, 2031, 2078
DpnI	GATC	9 cut(s)	258, 643, 795, 951, 1194, 1341, 1449, 1671, 1704
DpnII	GATC	9 cut(s)	256, 641, 793, 949, 1192, 1339, 1447, 1669, 1702
EaeI	YGGCCR	1 cut(s)	902
Eam1104I	CTCTTC	4 cut(s)	1404, 1452, 1533, 2059
EarI	CTCTTC	4 cut(s)	1404, 1452, 1533, 2059
Ecl136II	GAGCTC	1 cut(s)	1902
Eco130I	CCWWGG	6 cut(s)	39, 296, 1047, 1385, 1476, 1953
Eco24I	GRGCYC	3 cut(s)	27, 1514, 1904
Eco32I	GATATC	1 cut(s)	1885
Eco47I	GGWCC	2 cut(s)	1139, 1985
Eco53kI	GAGCTC	1 cut(s)	1902
Eco57I	CTGAAG	3 cut(s)	183, 1257, 1765
EcoICRI	GAGCTC	1 cut(s)	1902
EcoNI	CCTNNNNNAGG	1 cut(s)	1107
EcoO109I	RGGNCCY	3 cut(s)	1510, 1511, 1985
EcoRI	GAATTC	1 cut(s)	466
EcoRII	CCWGG	3 cut(s)	904, 1822, 1981
EcoRV	GATATC	1 cut(s)	1885
EcoT14I	CCWWGG	6 cut(s)	39, 296, 1047, 1385, 1476, 1953
EcoT22I	ATGCAT	3 cut(s)	83, 526, 1679
EcoT38I	GRGCYC	3 cut(s)	27, 1514, 1904
ErhI	CCWWGG	6 cut(s)	39, 296, 1047, 1385, 1476, 1953
FalI	AAGNNNNNCTT	4 cut(s)	82, 114, 1369, 1401
FaqI	GGGAC	3 cut(s)	404, 759, 1805
FauNDI	CATATG	1 cut(s)	1721
FbaI	TGATCA	1 cut(s)	793
Fnu4HI	GCNGC	4 cut(s)	151, 267, 1393, 1786
FokI	GGATG	6 cut(s)	328, 651, 828, 921, 1478, 1540
FriOI	GRGCYC	3 cut(s)	27, 1514, 1904
Fsp4HI	GCNGC	4 cut(s)	151, 267, 1393, 1786
FspBI	CTAG	8 cut(s)	207, 249, 297, 540, 1542, 1929, 2048, 2089
GlaI	GCGC	1 cut(s)	1391
GluI	GCNGC	4 cut(s)	151, 267, 1393, 1786
GsuI	CTGGAG	1 cut(s)	679
HaeII	RGCGCY	1 cut(s)	1393
HaeIII	GGCC	7 cut(s)	301, 447, 904, 1098, 1354, 1367, 1512
HapII	CCGG	3 cut(s)	731, 1142, 1838
HgaI	GACGC	1 cut(s)	1023
HhaI	GCGC	1 cut(s)	1392
Hin6I	GCGC	1 cut(s)	1390
HinP1I	GCGC	1 cut(s)	1390
HincII	GTYRAC	1 cut(s)	943
HindII	GTYRAC	1 cut(s)	943
HindIII	AAGCTT	1 cut(s)	959
HinfI	GANTC	7 cut(s)	86, 167, 548, 767, 1403, 1563, 1796
HpaII	CCGG	3 cut(s)	731, 1142, 1838
HphI	GGTGA	4 cut(s)	578, 1202, 1465, 1989
Hpy166II	GTNNAC	2 cut(s)	943, 1612
Hpy188I	TCNGA	7 cut(s)	108, 937, 970, 1072, 1276, 1408, 1606
Hpy188III	TCNNGA	7 cut(s)	90, 229, 668, 701, 744, 1165, 1343
Hpy8I	GTNNAC	2 cut(s)	943, 1612
Hpy99I	CGWCG	1 cut(s)	1253
HpyCH4III	ACNGT	8 cut(s)	283, 475, 683, 887, 947, 1003, 1751, 2041
HpyCH4IV	ACGT	2 cut(s)	1251, 1792
HpyF10VI	GCNNNNNNNGC	3 cut(s)	1058, 1724, 1761
HpyF3I	CTNAG	8 cut(s)	107, 270, 1265, 1349, 1376, 1605, 2031, 2078
HpySE526I	ACGT	2 cut(s)	1251, 1792
HspAI	GCGC	1 cut(s)	1390
KpnI	GGTACC	1 cut(s)	1032
Ksp22I	TGATCA	1 cut(s)	793
Kzo9I	GATC	9 cut(s)	256, 641, 793, 949, 1192, 1339, 1447, 1669, 1702
LguI	GCTCTTC	1 cut(s)	1404
LmnI	GCTCC	4 cut(s)	436, 1664, 1955, 2049
Lsp1109I	GCAGC	4 cut(s)	137, 253, 1379, 1772
LweI	GCATC	2 cut(s)	1640, 1996
MaeI	CTAG	8 cut(s)	207, 249, 297, 540, 1542, 1929, 2048, 2089
MaeII	ACGT	2 cut(s)	1251, 1792
MaeIII	GTNAC	6 cut(s)	361, 368, 887, 1035, 1793, 1963
MalI	GATC	9 cut(s)	258, 643, 795, 951, 1194, 1341, 1449, 1671, 1704
MboI	GATC	9 cut(s)	256, 641, 793, 949, 1192, 1339, 1447, 1669, 1702
MfeI	CAATTG	1 cut(s)	18
MflI	RGATCY	4 cut(s)	641, 1339, 1447, 1702
MhlI	GDGCHC	8 cut(s)	27, 97, 113, 982, 1514, 1904, 2039, 2046
MlsI	TGGCCA	1 cut(s)	904
MluNI	TGGCCA	1 cut(s)	904
MlyI	GAGTC	4 cut(s)	542, 776, 1557, 1790
MmeI	TCCRAC	2 cut(s)	441, 1420
Mox20I	TGGCCA	1 cut(s)	904
Mph1103I	ATGCAT	3 cut(s)	83, 526, 1679
MroXI	GAANNNNTTC	2 cut(s)	185, 922
MscI	TGGCCA	1 cut(s)	904
MseI	TTAA	4 cut(s)	285, 353, 788, 882
MslI	CAYNNNNRTG	1 cut(s)	669
Msp20I	TGGCCA	1 cut(s)	904
MspA1I	CMGCKG	1 cut(s)	1785
MspI	CCGG	3 cut(s)	731, 1142, 1838
MspR9I	CCNGG	3 cut(s)	906, 1824, 1983
MunI	CAATTG	1 cut(s)	18
MvaI	CCWGG	3 cut(s)	906, 1824, 1983
MvnI	CGCG	1 cut(s)	1034
MwoI	GCNNNNNNNGC	3 cut(s)	1058, 1724, 1761
NdeI	CATATG	1 cut(s)	1721
NdeII	GATC	9 cut(s)	256, 641, 793, 949, 1192, 1339, 1447, 1669, 1702
NlaIV	GGNNCC	4 cut(s)	1030, 1512, 1513, 1717
NmuCI	GTSAC	4 cut(s)	368, 887, 1035, 1793
NsiI	ATGCAT	3 cut(s)	83, 526, 1679
NspI	RCATGY	2 cut(s)	399, 1681
PagI	TCATGA	1 cut(s)	1164
PciI	ACATGT	1 cut(s)	395
PciSI	GCTCTTC	1 cut(s)	1404
PdmI	GAANNNNTTC	2 cut(s)	185, 922
PfeI	GAWTC	3 cut(s)	86, 167, 1403
PkrI	GCNGC	4 cut(s)	152, 268, 1394, 1787
PleI	GAGTC	4 cut(s)	542, 775, 1557, 1790
PpsI	GAGTC	4 cut(s)	542, 775, 1557, 1790
PpuMI	RGGWCCY	1 cut(s)	1985
PscI	ACATGT	1 cut(s)	395
PshAI	GACNNNNGTC	1 cut(s)	396
Psp124BI	GAGCTC	1 cut(s)	1904
Psp5II	RGGWCCY	1 cut(s)	1985
Psp6I	CCWGG	3 cut(s)	904, 1822, 1981
PspGI	CCWGG	3 cut(s)	904, 1822, 1981
PspN4I	GGNNCC	4 cut(s)	1030, 1512, 1513, 1717
PspOMI	GGGCCC	1 cut(s)	1510
PspPI	GGNCC	6 cut(s)	1096, 1139, 1365, 1510, 1511, 1985
PspPPI	RGGWCCY	1 cut(s)	1985
PstI	CTGCAG	1 cut(s)	1397
PstNI	CAGNNNCTG	1 cut(s)	1450
PsuI	RGATCY	4 cut(s)	641, 1339, 1447, 1702
PvuII	CAGCTG	1 cut(s)	1785
RsaI	GTAC	7 cut(s)	240, 913, 995, 1030, 1595, 1813, 2064
RsaNI	GTAC	7 cut(s)	239, 912, 994, 1029, 1594, 1812, 2063
RseI	CAYNNNNRTG	1 cut(s)	669
SacI	GAGCTC	1 cut(s)	1904
SapI	GCTCTTC	1 cut(s)	1404
SaqAI	TTAA	4 cut(s)	285, 353, 788, 882
SatI	GCNGC	4 cut(s)	151, 267, 1393, 1786
Sau3AI	GATC	9 cut(s)	256, 641, 793, 949, 1192, 1339, 1447, 1669, 1702
Sau96I	GGNCC	6 cut(s)	1096, 1139, 1365, 1510, 1511, 1985
ScaI	AGTACT	1 cut(s)	240
SchI	GAGTC	4 cut(s)	542, 776, 1557, 1790
ScrFI	CCNGG	3 cut(s)	906, 1824, 1983
SduI	GDGCHC	8 cut(s)	27, 97, 113, 982, 1514, 1904, 2039, 2046
SfaNI	GCATC	2 cut(s)	1640, 1996
SfcI	CTRYAG	1 cut(s)	1393
SinI	GGWCC	2 cut(s)	1139, 1985
SmiMI	CAYNNNNRTG	1 cut(s)	669
SmlI	CTYRAG	2 cut(s)	119, 623
SmoI	CTYRAG	2 cut(s)	119, 623
SsiI	CCGC	3 cut(s)	1032, 1788, 1876
SspMI	CTAG	8 cut(s)	207, 249, 297, 540, 1542, 1929, 2048, 2089
SstI	GAGCTC	1 cut(s)	1904
StyD4I	CCNGG	3 cut(s)	904, 1822, 1981
StyI	CCWWGG	6 cut(s)	39, 296, 1047, 1385, 1476, 1953
TaaI	ACNGT	8 cut(s)	283, 475, 683, 887, 947, 1003, 1751, 2041
TaiI	ACGT	2 cut(s)	1254, 1795
TaqI	TCGA	3 cut(s)	1248, 1401, 1898
TatI	WGTACW	2 cut(s)	238, 911
TfiI	GAWTC	3 cut(s)	86, 167, 1403
Tru1I	TTAA	4 cut(s)	285, 353, 788, 882
Tru9I	TTAA	4 cut(s)	285, 353, 788, 882
TscAI	CASTG	7 cut(s)	166, 478, 595, 1024, 1738, 1756, 2046
TseFI	GTSAC	4 cut(s)	368, 887, 1035, 1793
TseI	GCWGC	4 cut(s)	150, 266, 1392, 1785
Tsp45I	GTSAC	4 cut(s)	368, 887, 1035, 1793
TspRI	CASTG	7 cut(s)	166, 478, 595, 1024, 1738, 1756, 2046
VpaK11BI	GGWCC	2 cut(s)	1139, 1985
XagI	CCTNNNNNAGG	1 cut(s)	1107
XapI	RAATTY	2 cut(s)	337, 466
XceI	RCATGY	2 cut(s)	399, 1681
XcmI	CCANNNNNNNNNTGG	1 cut(s)	778
XmaJI	CCTAGG	1 cut(s)	296
XmnI	GAANNNNTTC	2 cut(s)	185, 922
XspI	CTAG	8 cut(s)	207, 249, 297, 540, 1542, 1929, 2048, 2089
ZrmI	AGTACT	1 cut(s)	240
Zsp2I	ATGCAT	3 cut(s)	83, 526, 1679

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.