Rmu_sc0007177.1_g000006

54S ribosomal protein L51

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0007177.1
OG0000172
Physical Location & Seq
Forward (+)
41721 .. 45209
3489 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0007177.1_g000006.1.cds

Sequence Viewer

Length: 1392 bp
atggccttgagaggtgtgtggcaactgaaaaaactggttgtgagctattctgattggggaggaagcagtaggggaatcaggtcattcatggagtcttacctacctgcatttaaggagaagaatcctcagctagaggtagttactgaacacattcgtggtcagcatcctcatttgaagggcttatacaacaaccaaaatgaaagagtggtatgtgtgaagaatatggatccagaagagattcttcaatgtgcaactaggctaaggaattcactcgggagaaaagtgggtttggagtttttgaaagtcccacttcatggcagcagctattgcttccatgatagccaagctagcgaccagttgtcgctcagagagggtgaggaaccggttgacctgggaaaccttagggttccggggaaggaatttcttgctcgccatttctacttggtggggaagctcaacacttgtagggcggtggttttggattcttttaggagcgcggtgtgttcaatgtggagattgatggggactgtggaggttctaccacgtggggatcgttttctgtttacgtgcactcttgaatgtgatgtcgctcgggtaaagaagggaggcccttggagttttcagtgggctatgcttttgttgaatgactacaatggattttcagtgattgatgcggtgaagcttgactttgtttggatctgggttgggatccatggccttccactgggtatcttgacggaacccactgtccggctggtgggcggcacgatcggtgagtatgagcggctattggggaggtgcagactgtgtaccttcttgaaccacggaggacagaggtgttcaagggaggaggtggaggcgactgacactgtggtggacgatggttcgcagcaggttcagaggctggctcttccagggctcgtgttttgggctaattcccagccatctctttccttgccttcgaatttcaaggtcccaactctgttgaagaagaaaccagtgcagattcgtcctctcccagaggtggaatcttcgcctgggtctgaagatacctctgctcttgaccttgtggttgggatatgtcgccctagggaagaggaggatgaggatggtggaaaacgagctaaacatagcttagcattggtttcgggcattctgcaaccggagaacctcgggctgaaattctcatctgagggtttggtggaggtgaaggtaacgtcgcctcccaaagtgtacaagaagaagggcaggcctagaggacatagaaataaggtcaagaaggcgatgtctgtgagtgcgggttcggggtccatggtctctcctgaagatggcgttggtaatgcgcctggacttgagggagcgatgactccgccagattcctgggcaatttag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
L51_S25_CI-B8

Protein Analysis

463

Amino Acids

51.23

Weight (kDa)

8.76

Isoelectric Point (pI)

38.01

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000172)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G59650 AT3G59650
fragaria_vesca FvH4_1g19981 FvH4_1g22221 FvH4_2g13530 FvH4_2g13791 FvH4_2g14332 FvH4_2g14911 FvH4_2g16332 FvH4_3g10980 FvH4_3g11141 FvH4_3g14171 FvH4_3g26311 FvH4_3g28254 FvH4_3g29741 FvH4_4g05261 FvH4_4g12002 FvH4_4g13371 FvH4_4g15541 FvH4_4g18531 FvH4_5g02661 FvH4_5g02662 FvH4_5g16791 FvH4_5g29700 FvH4_5g35881 FvH4_5g37061 FvH4_6g01571 FvH4_6g12761 FvH4_6g14961 FvH4_6g20381 FvH4_6g22001 FvH4_6g23673 FvH4_6g23960 FvH4_6g28051 FvH4_6g31094 FvH4_6g36541 FvH4_7g00911 FvH4_7g06200 FvH4_7g06200 FvH4_7g09551
malus_domestica MD08G1230600.v1.1
prunus_persica Prupe.1G206900_v2.0.a1 Prupe.1G206900_v2.0.a1 Prupe.1G206900_v2.0.a1
pyrus_communis pycom08g20050 pycom15g37590
rosa_chinensis RchiOBHm_Chr1g0333831 RchiOBHm_Chr1g0344871 RchiOBHm_Chr3g0473241 RchiOBHm_Chr5g0018871 RchiOBHm_Chr6g0265791
rosa_laevigata RLG00000005720 RLG00000012718 RLG00000027174 RLG00000029225 RLG00000029527
rosa_multiflora Rmu_co8002714.1_g000001 Rmu_co8072270.1_g000001 Rmu_co8095594.1_g000001 Rmu_co8308871.1_g000001 Rmu_co8398699.1_g000001 Rmu_co8404287.1_g000001 Rmu_sc0000035.1_g000010 Rmu_sc0000133.1_g000007 Rmu_sc0000253.1_g000023 Rmu_sc0000308.1_g000010 Rmu_sc0000309.1_g000030 Rmu_sc0000515.1_g000015 Rmu_sc0000865.1_g000001 Rmu_sc0000889.1_g000005 Rmu_sc0001262.1_g000011 Rmu_sc0001518.1_g000013 Rmu_sc0001533.1_g000006 Rmu_sc0001547.1_g000007 Rmu_sc0001826.1_g000013 Rmu_sc0002060.1_g000017 Rmu_sc0002129.1_g000005 Rmu_sc0002449.1_g000016 Rmu_sc0002460.1_g000036 Rmu_sc0002475.1_g000014 Rmu_sc0002553.1_g000017 Rmu_sc0002759.1_g000033 Rmu_sc0002918.1_g000009 Rmu_sc0002955.1_g000020 Rmu_sc0003094.1_g000010 Rmu_sc0003669.1_g000009 Rmu_sc0004109.1_g000008 Rmu_sc0004350.1_g000007 Rmu_sc0004542.1_g000018 Rmu_sc0004967.1_g000005 Rmu_sc0005026.1_g000005 Rmu_sc0005369.1_g000013 Rmu_sc0005400.1_g000025 Rmu_sc0005420.1_g000006 Rmu_sc0005467.1_g000013 Rmu_sc0005497.1_g000003 Rmu_sc0005607.1_g000023 Rmu_sc0005949.1_g000008 Rmu_sc0005970.1_g000002 Rmu_sc0006452.1_g000001 Rmu_sc0006720.1_g000008 Rmu_sc0006867.1_g000004 Rmu_sc0007177.1_g000006 Rmu_sc0007199.1_g000011 Rmu_sc0007783.1_g000004 Rmu_sc0007885.1_g000006 Rmu_sc0008619.1_g000001 Rmu_sc0008709.1_g000004 Rmu_sc0008709.1_g000005 Rmu_sc0009185.1_g000029 Rmu_sc0010244.1_g000010 Rmu_sc0011610.1_g000005 Rmu_sc0011680.1_g000013 Rmu_sc0012075.1_g000003 Rmu_sc0012278.1_g000001 Rmu_sc0012628.1_g000001 Rmu_sc0018485.1_g000006 Rmu_sc0019960.1_g000001 Rmu_sc0020177.1_g000002 Rmu_sc0020656.1_g000001 Rmu_sc0021333.1_g000003 Rmu_sc0023170.1_g000002 Rmu_sc0023989.1_g000005 Rmu_sc0025259.1_g000001 Rmu_sc0025350.1_g000013 Rmu_sc0029678.1_g000002 Rmu_sc0035939.1_g000001 Rmu_sc0039260.1_g000001 Rmu_sc0039886.1_g000001 Rmu_ssc0000323.1_g000030 Rmu_ssc0000333.1_g000005 Rmu_ssc0000471.1_g000017 Rmu_ssc0000480.1_g000025
rosa_roxburghii Rroxscaffold_1G00006060 Rroxscaffold_1G00048570 Rroxscaffold_1G00057650 Rroxscaffold_1G00072720 Rroxscaffold_4G00281190 Rroxscaffold_4G00317160 Rroxscaffold_6G00411570
rosa_rugosa Rorug01G0004800 Rorug01G0112100 Rorug01G0206100 Rorug02G0324000 Rorug05G0305600 Rorug05G0326800 Rorug06G0018900 Rorug06G0167000 Rorug07G0031200 Rorug07G0071900
rosa_samantha Rh1AG134700 Rh1BG103000 Rh1CG007300 Rh1CG128100 Rh1DG140100 Rh2DG579500 Rh3DG199000 Rh4BG252500 Rh5AG374900 Rh5BG146800 Rh5BG151500 Rh5DG399700
rosa_wichuraiana Rw0G001820 Rw1G011230 Rw1G011240 Rw1G027290 Rw2G011670 Rw2G039270 Rw6G018440 Rw6G023120 Rw7G025180

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 112, 883
AccB7I CCANNNNNTGG 1 cut(s) 314
AccBSI CCGCTC 1 cut(s) 784
AccII CGCG 1 cut(s) 497
AciI CCGC 7 cut(s) 470, 497, 674, 762, 784, 1298, 1370
AclWI GGATC 6 cut(s) 221, 234, 558, 703, 704, 716
AcsI RAATTY 4 cut(s) 265, 419, 964, 1181
AcuI CTGAAG 2 cut(s) 1065, 1344
AcvI CACGTG 1 cut(s) 545
AfaI GTAC 2 cut(s) 811, 1235
AfiI CCNNNNNNNGG 6 cut(s) 314, 724, 750, 757, 1024, 1328
AgeI ACCGGT 1 cut(s) 382
AhdI GACNNNNNGTC 1 cut(s) 358
AjnI CCWGG 5 cut(s) 390, 913, 1036, 1345, 1379
AjuI GAANNNNNNNTTGG 2 cut(s) 1317, 1349
AleI CACNNNNGTG 2 cut(s) 153, 872
AloI GAACNNNNNNTCC 2 cut(s) 732, 764
AluBI AGCT 8 cut(s) 45, 130, 324, 347, 454, 682, 1124, 1134
AluI AGCT 8 cut(s) 45, 130, 324, 347, 454, 682, 1124, 1134
Alw21I GWGCWC 1 cut(s) 572
Alw26I GTCTC 1 cut(s) 1321
Alw44I GTGCAC 1 cut(s) 568
AlwI GGATC 6 cut(s) 221, 234, 558, 703, 704, 716
AlwNI CAGNNNCTG 1 cut(s) 904
Ama87I CYCGRG 3 cut(s) 272, 591, 1172
AoxI GGCC 4 cut(s) 3, 607, 715, 1250
ApaLI GTGCAC 1 cut(s) 568
ApeKI GCWGC 3 cut(s) 318, 321, 889
ApoI RAATTY 4 cut(s) 265, 419, 964, 1181
AsiGI ACCGGT 1 cut(s) 382
Asp700I GAANNNNTTC 2 cut(s) 150, 237
AspA2I CCTAGG 1 cut(s) 1088
AspLEI GCGC 2 cut(s) 497, 1345
AspS9I GGNCC 3 cut(s) 608, 973, 1308
AsuC2I CCSGG 1 cut(s) 411
AsuHPI GGTGA 4 cut(s) 386, 688, 785, 1219
AsuII TTCGAA 1 cut(s) 962
AsuNHI GCTAGC 1 cut(s) 347
AvaI CYCGRG 3 cut(s) 272, 591, 1172
AvaII GGWCC 2 cut(s) 973, 1308
AvrII CCTAGG 1 cut(s) 1088
AxyI CCTNAGG 1 cut(s) 401
BaeGI GKGCMC 1 cut(s) 572
BamHI GGATCC 2 cut(s) 226, 708
BanII GRGCYC 1 cut(s) 921
BarI GAAGNNNNNNTAC 2 cut(s) 167, 199
BauI CACGAG 1 cut(s) 920
BbrPI CACGTG 1 cut(s) 545
Bbv12I GWGCWC 1 cut(s) 572
BbvCI CCTCAGC 1 cut(s) 126
BbvI GCAGC 3 cut(s) 330, 333, 901
BccI CCATC 5 cut(s) 514, 875, 952, 1103, 1322
BcgI CGANNNNNNTGC 2 cut(s) 1128, 1162
BciT130I CCWGG 5 cut(s) 392, 915, 1038, 1347, 1381
BcnI CCSGG 1 cut(s) 411
BcoDI GTCTC 1 cut(s) 1321
BfaI CTAG 5 cut(s) 131, 255, 348, 1089, 1254
BfuAI ACCTGC 2 cut(s) 112, 883
BisI GCNGC 5 cut(s) 319, 322, 763, 785, 890
BlnI CCTAGG 1 cut(s) 1088
BlpI GCTNAGC 1 cut(s) 1135
BlsI GCNGC 5 cut(s) 320, 323, 764, 786, 891
Bme1390I CCNGG 6 cut(s) 392, 411, 915, 1038, 1347, 1381
Bme18I GGWCC 2 cut(s) 973, 1308
BmeRI GACNNNNNGTC 1 cut(s) 358
BmeT110I CYCGRG 3 cut(s) 272, 591, 1172
BmgT120I GGNCC 3 cut(s) 608, 973, 1308
BmiI GGNNCC 7 cut(s) 228, 381, 408, 710, 741, 975, 1309
BmrFI CCNGG 6 cut(s) 392, 411, 915, 1038, 1347, 1381
BmrI ACTGGG 1 cut(s) 734
BmsI GCATC 2 cut(s) 172, 661
BmtI GCTAGC 1 cut(s) 351
BmuI ACTGGG 1 cut(s) 734
BplI GAGNNNNNCTC 2 cut(s) 892, 924
Bpu10I CCTNAGC 2 cut(s) 126, 260
Bpu1102I GCTNAGC 1 cut(s) 1135
Bpu14I TTCGAA 1 cut(s) 962
BpuEI CTTGAG 2 cut(s) 28, 1373
BpuMI CCSGG 1 cut(s) 411
BsaAI YACGTR 2 cut(s) 545, 567
BsaI GGTCTC 1 cut(s) 1321
BsaWI WCCGGW 2 cut(s) 382, 1162
BsaXI ACNNNNNCTCC 2 cut(s) 1207, 1237
Bsc4I CCNNNNNNNGG 6 cut(s) 314, 724, 750, 757, 1024, 1328
Bse118I RCCGGY 1 cut(s) 382
Bse1I ACTGG 4 cut(s) 39, 355, 729, 998
Bse21I CCTNAGG 1 cut(s) 401
BseBI CCWGG 5 cut(s) 392, 915, 1038, 1347, 1381
BseGI GGATG 3 cut(s) 163, 1108, 1114
BseLI CCNNNNNNNGG 6 cut(s) 314, 724, 750, 757, 1024, 1328
BseMII CTCAG 3 cut(s) 140, 379, 1182
BseNI ACTGG 4 cut(s) 39, 355, 729, 998
BseRI GAGGAG 2 cut(s) 863, 1112
BseSI GKGCMC 1 cut(s) 572
BseXI GCAGC 3 cut(s) 330, 333, 901
BseYI CCCAGC 1 cut(s) 939
BsgI GTGCAG 2 cut(s) 820, 1022
Bsh1236I CGCG 1 cut(s) 497
Bsh1285I CGRYCG 1 cut(s) 771
BshFI GGCC 4 cut(s) 5, 609, 717, 1252
BshTI ACCGGT 1 cut(s) 382
BsiEI CGRYCG 1 cut(s) 771
BsiHKAI GWGCWC 1 cut(s) 572
BsiHKCI CYCGRG 3 cut(s) 272, 591, 1172
BsiSI CCGG 4 cut(s) 383, 410, 751, 1163
BslFI GGGAC 3 cut(s) 290, 538, 959
BslI CCNNNNNNNGG 6 cut(s) 314, 724, 750, 757, 1024, 1328
BsmAI GTCTC 1 cut(s) 1321
BsmFI GGGAC 3 cut(s) 290, 538, 959
BsmI GAATGC 1 cut(s) 1152
BsnI GGCC 4 cut(s) 5, 609, 717, 1252
Bso31I GGTCTC 1 cut(s) 1321
BsoBI CYCGRG 3 cut(s) 272, 591, 1172
Bsp119I TTCGAA 1 cut(s) 962
Bsp1286I GDGCHC 2 cut(s) 572, 921
Bsp1407I TGTACA 1 cut(s) 1233
Bsp143I GATC 5 cut(s) 226, 550, 696, 708, 768
Bsp1720I GCTNAGC 1 cut(s) 1135
Bsp19I CCATGG 2 cut(s) 712, 1311
BspACI CCGC 7 cut(s) 470, 497, 674, 762, 784, 1298, 1370
BspANI GGCC 4 cut(s) 5, 609, 717, 1252
BspCNI CTCAG 3 cut(s) 139, 378, 1183
BspFNI CGCG 1 cut(s) 497
BspLI GGNNCC 7 cut(s) 228, 381, 408, 710, 741, 975, 1309
BspMI ACCTGC 2 cut(s) 112, 883
BspOI GCTAGC 1 cut(s) 351
BspPI GGATC 6 cut(s) 221, 234, 558, 703, 704, 716
BspQI GCTCTTC 1 cut(s) 915
BspT104I TTCGAA 1 cut(s) 962
BspTNI GGTCTC 1 cut(s) 1321
BsrBI CCGCTC 1 cut(s) 784
BsrFI RCCGGY 1 cut(s) 382
BsrGI TGTACA 1 cut(s) 1233
BsrI ACTGG 4 cut(s) 39, 355, 729, 998
BssAI RCCGGY 1 cut(s) 382
BssMI GATC 5 cut(s) 226, 550, 696, 708, 768
BssSI CACGAG 1 cut(s) 920
BssT1I CCWWGG 4 cut(s) 611, 712, 1088, 1311
Bst2BI CACGAG 1 cut(s) 920
Bst2UI CCWGG 5 cut(s) 392, 915, 1038, 1347, 1381
Bst4CI ACNGT 4 cut(s) 529, 748, 807, 871
Bst6I CTCTTC 3 cut(s) 228, 915, 1089
BstAPI GCANNNNNTGC 1 cut(s) 327
BstAUI TGTACA 1 cut(s) 1233
BstBAI YACGTR 2 cut(s) 545, 567
BstBI TTCGAA 1 cut(s) 962
BstC8I GCNNGC 4 cut(s) 349, 430, 906, 1250
BstDEI CTNAG 6 cut(s) 126, 260, 365, 401, 1135, 1191
BstDSI CCRYGG 3 cut(s) 712, 823, 1311
BstF5I GGATG 3 cut(s) 163, 1108, 1114
BstFNI CGCG 1 cut(s) 497
BstHHI GCGC 2 cut(s) 497, 1345
BstKTI GATC 5 cut(s) 229, 553, 699, 711, 771
BstMAI GTCTC 1 cut(s) 1321
BstMBI GATC 5 cut(s) 226, 550, 696, 708, 768
BstMCI CGRYCG 1 cut(s) 771
BstMWI GCNNNNNNNGC 2 cut(s) 327, 348
BstNI CCWGG 5 cut(s) 392, 915, 1038, 1347, 1381
BstSCI CCNGG 6 cut(s) 390, 409, 913, 1036, 1345, 1379
BstSLI GKGCMC 1 cut(s) 572
BstUI CGCG 1 cut(s) 497
BstV1I GCAGC 3 cut(s) 330, 333, 901
BstX2I RGATCY 3 cut(s) 226, 696, 708
BstXI CCANNNNNNTGG 1 cut(s) 1380
BstYI RGATCY 3 cut(s) 226, 696, 708
Bsu36I CCTNAGG 1 cut(s) 401
BsuRI GGCC 4 cut(s) 5, 609, 717, 1252
BtgI CCRYGG 3 cut(s) 712, 823, 1311
BtgZI GCGATG 2 cut(s) 1298, 1376
BtsCI GGATG 3 cut(s) 163, 1108, 1114
BtsIMutI CAGTG 6 cut(s) 629, 669, 722, 744, 867, 1005
BveI ACCTGC 2 cut(s) 112, 883
Cac8I GCNNGC 4 cut(s) 349, 430, 906, 1250
CaiI CAGNNNCTG 1 cut(s) 904
CfoI GCGC 2 cut(s) 497, 1345
Cfr10I RCCGGY 1 cut(s) 382
Cfr13I GGNCC 3 cut(s) 608, 973, 1308
Csp6I GTAC 2 cut(s) 810, 1234
CspAI ACCGGT 1 cut(s) 382
CviAII CATG 5 cut(s) 88, 314, 335, 713, 1312
CviQI GTAC 2 cut(s) 810, 1234
DdeI CTNAG 6 cut(s) 126, 260, 365, 401, 1135, 1191
DpnI GATC 5 cut(s) 228, 552, 698, 710, 770
DpnII GATC 5 cut(s) 226, 550, 696, 708, 768
DriI GACNNNNNGTC 1 cut(s) 358
Eam1104I CTCTTC 3 cut(s) 228, 915, 1089
Eam1105I GACNNNNNGTC 1 cut(s) 358
EarI CTCTTC 3 cut(s) 228, 915, 1089
EciI GGCGGA 1 cut(s) 1359
Eco130I CCWWGG 4 cut(s) 611, 712, 1088, 1311
Eco147I AGGCCT 1 cut(s) 1252
Eco24I GRGCYC 1 cut(s) 921
Eco31I GGTCTC 1 cut(s) 1321
Eco47I GGWCC 2 cut(s) 973, 1308
Eco57I CTGAAG 2 cut(s) 1065, 1344
Eco72I CACGTG 1 cut(s) 545
Eco81I CCTNAGG 1 cut(s) 401
Eco88I CYCGRG 3 cut(s) 272, 591, 1172
EcoO109I RGGNCCY 2 cut(s) 608, 973
EcoRI GAATTC 1 cut(s) 265
EcoRII CCWGG 5 cut(s) 390, 913, 1036, 1345, 1379
EcoT14I CCWWGG 4 cut(s) 611, 712, 1088, 1311
EcoT38I GRGCYC 1 cut(s) 921
ErhI CCWWGG 4 cut(s) 611, 712, 1088, 1311
FaeI CATG 5 cut(s) 91, 317, 338, 716, 1315
FalI AAGNNNNNCTT 6 cut(s) 225, 257, 294, 326, 671, 703
FaqI GGGAC 3 cut(s) 290, 538, 959
FatI CATG 5 cut(s) 87, 313, 334, 712, 1311
FauI CCCGC 1 cut(s) 1291
Fnu4HI GCNGC 5 cut(s) 319, 322, 763, 785, 890
FokI GGATG 3 cut(s) 150, 1115, 1121
FriOI GRGCYC 1 cut(s) 921
Fsp4HI GCNGC 5 cut(s) 319, 322, 763, 785, 890
FspBI CTAG 5 cut(s) 131, 255, 348, 1089, 1254
GlaI GCGC 2 cut(s) 496, 1344
GluI GCNGC 5 cut(s) 319, 322, 763, 785, 890
GsaI CCCAGC 1 cut(s) 943
HaeIII GGCC 4 cut(s) 5, 609, 717, 1252
HapII CCGG 4 cut(s) 383, 410, 751, 1163
HhaI GCGC 2 cut(s) 497, 1345
Hin1II CATG 5 cut(s) 91, 317, 338, 716, 1315
Hin6I GCGC 2 cut(s) 495, 1343
HinP1I GCGC 2 cut(s) 495, 1343
HincII GTYRAC 1 cut(s) 388
HindII GTYRAC 1 cut(s) 388
HindIII AAGCTT 1 cut(s) 680
HinfI GANTC 9 cut(s) 75, 92, 121, 238, 482, 1006, 1028, 1366, 1376
HpaII CCGG 4 cut(s) 383, 410, 751, 1163
HphI GGTGA 4 cut(s) 386, 688, 785, 1219
Hpy166II GTNNAC 6 cut(s) 388, 564, 570, 810, 877, 1234
Hpy188I TCNGA 5 cut(s) 52, 368, 900, 1045, 1192
Hpy188III TCNNGA 8 cut(s) 230, 274, 575, 733, 817, 1061, 1276, 1322
Hpy8I GTNNAC 6 cut(s) 388, 564, 570, 810, 877, 1234
Hpy99I CGWCG 1 cut(s) 1222
HpyAV CCTTC 9 cut(s) 169, 409, 595, 728, 823, 969, 1204, 1237, 1273
HpyCH4III ACNGT 4 cut(s) 529, 748, 807, 871
HpyCH4IV ACGT 3 cut(s) 544, 566, 1217
HpyCH4V TGCA 6 cut(s) 107, 251, 570, 801, 1003, 1159
HpyF10VI GCNNNNNNNGC 2 cut(s) 327, 348
HpyF3I CTNAG 6 cut(s) 126, 260, 365, 401, 1135, 1191
HpySE526I ACGT 3 cut(s) 544, 566, 1217
Hsp92II CATG 5 cut(s) 91, 317, 338, 716, 1315
HspAI GCGC 2 cut(s) 495, 1343
Kzo9I GATC 5 cut(s) 226, 550, 696, 708, 768
LguI GCTCTTC 1 cut(s) 915
LmnI GCTCC 2 cut(s) 492, 1358
Lsp1109I GCAGC 3 cut(s) 330, 333, 901
LweI GCATC 2 cut(s) 172, 661
MaeI CTAG 5 cut(s) 131, 255, 348, 1089, 1254
MaeII ACGT 3 cut(s) 544, 566, 1217
MaeIII GTNAC 2 cut(s) 139, 1213
MalI GATC 5 cut(s) 228, 552, 698, 710, 770
MbiI CCGCTC 1 cut(s) 784
MboI GATC 5 cut(s) 226, 550, 696, 708, 768
MflI RGATCY 3 cut(s) 226, 696, 708
MhlI GDGCHC 2 cut(s) 572, 921
MluCI AATT 6 cut(s) 265, 419, 934, 964, 1181, 1386
MlyI GAGTC 2 cut(s) 101, 1360
MroXI GAANNNNTTC 2 cut(s) 150, 237
MseI TTAA 1 cut(s) 111
MslI CAYNNNNRTG 2 cut(s) 153, 872
MspI CCGG 4 cut(s) 383, 410, 751, 1163
MspR9I CCNGG 6 cut(s) 392, 411, 915, 1038, 1347, 1381
Mva1269I GAATGC 1 cut(s) 1152
MvaI CCWGG 5 cut(s) 392, 915, 1038, 1347, 1381
MvnI CGCG 1 cut(s) 497
MwoI GCNNNNNNNGC 2 cut(s) 327, 348
NciI CCSGG 1 cut(s) 411
NcoI CCATGG 2 cut(s) 712, 1311
NdeII GATC 5 cut(s) 226, 550, 696, 708, 768
NheI GCTAGC 1 cut(s) 347
NlaIII CATG 5 cut(s) 91, 317, 338, 716, 1315
NlaIV GGNNCC 7 cut(s) 228, 381, 408, 710, 741, 975, 1309
NspV TTCGAA 1 cut(s) 962
OliI CACNNNNGTG 2 cut(s) 153, 872
PceI AGGCCT 1 cut(s) 1252
PciSI GCTCTTC 1 cut(s) 915
PcsI WCGNNNNNNNCGW 1 cut(s) 550
PctI GAATGC 1 cut(s) 1152
PdmI GAANNNNTTC 2 cut(s) 150, 237
PfeI GAWTC 7 cut(s) 75, 121, 238, 482, 1006, 1028, 1376
PflMI CCANNNNNTGG 1 cut(s) 314
PinAI ACCGGT 1 cut(s) 382
PkrI GCNGC 5 cut(s) 320, 323, 764, 786, 891
Ple19I CGATCG 1 cut(s) 771
PleI GAGTC 2 cut(s) 100, 1360
PmaCI CACGTG 1 cut(s) 545
PmlI CACGTG 1 cut(s) 545
PpsI GAGTC 2 cut(s) 100, 1360
Ppu21I YACGTR 2 cut(s) 545, 567
PpuMI RGGWCCY 1 cut(s) 973
Psp5II RGGWCCY 1 cut(s) 973
Psp6I CCWGG 5 cut(s) 390, 913, 1036, 1345, 1379
PspCI CACGTG 1 cut(s) 545
PspFI CCCAGC 1 cut(s) 939
PspGI CCWGG 5 cut(s) 390, 913, 1036, 1345, 1379
PspN4I GGNNCC 7 cut(s) 228, 381, 408, 710, 741, 975, 1309
PspPI GGNCC 3 cut(s) 608, 973, 1308
PspPPI RGGWCCY 1 cut(s) 973
PstNI CAGNNNCTG 1 cut(s) 904
PsuI RGATCY 3 cut(s) 226, 696, 708
PvuI CGATCG 1 cut(s) 771
RsaI GTAC 2 cut(s) 811, 1235
RsaNI GTAC 2 cut(s) 810, 1234
RseI CAYNNNNRTG 2 cut(s) 153, 872
SapI GCTCTTC 1 cut(s) 915
SaqAI TTAA 1 cut(s) 111
SatI GCNGC 5 cut(s) 319, 322, 763, 785, 890
Sau3AI GATC 5 cut(s) 226, 550, 696, 708, 768
Sau96I GGNCC 3 cut(s) 608, 973, 1308
SchI GAGTC 2 cut(s) 101, 1360
ScrFI CCNGG 6 cut(s) 392, 411, 915, 1038, 1347, 1381
SduI GDGCHC 2 cut(s) 572, 921
SfaNI GCATC 2 cut(s) 172, 661
SfuI TTCGAA 1 cut(s) 962
SinI GGWCC 2 cut(s) 973, 1308
SmiMI CAYNNNNRTG 2 cut(s) 153, 872
SmlI CTYRAG 2 cut(s) 7, 1352
SmoI CTYRAG 2 cut(s) 7, 1352
Sse9I AATT 6 cut(s) 265, 419, 934, 964, 1181, 1386
SseBI AGGCCT 1 cut(s) 1252
SsiI CCGC 7 cut(s) 470, 497, 674, 762, 784, 1298, 1370
SspMI CTAG 5 cut(s) 131, 255, 348, 1089, 1254
StuI AGGCCT 1 cut(s) 1252
StyD4I CCNGG 6 cut(s) 390, 409, 913, 1036, 1345, 1379
StyI CCWWGG 4 cut(s) 611, 712, 1088, 1311
TaaI ACNGT 4 cut(s) 529, 748, 807, 871
TaiI ACGT 3 cut(s) 547, 569, 1220
TaqI TCGA 1 cut(s) 962
TasI AATT 6 cut(s) 265, 419, 934, 964, 1181, 1386
TatI WGTACW 1 cut(s) 1233
TauI GCSGC 2 cut(s) 765, 787
TfiI GAWTC 7 cut(s) 75, 121, 238, 482, 1006, 1028, 1376
Tru1I TTAA 1 cut(s) 111
Tru9I TTAA 1 cut(s) 111
TscAI CASTG 6 cut(s) 629, 669, 729, 751, 874, 1005
TseI GCWGC 3 cut(s) 318, 321, 889
TspDTI ATGAA 3 cut(s) 76, 213, 302
TspGWI ACGGA 2 cut(s) 752, 840
TspRI CASTG 6 cut(s) 629, 669, 729, 751, 874, 1005
Van91I CCANNNNNTGG 1 cut(s) 314
VneI GTGCAC 1 cut(s) 568
VpaK11BI GGWCC 2 cut(s) 973, 1308
XapI RAATTY 4 cut(s) 265, 419, 964, 1181
XcmI CCANNNNNNNNNTGG 1 cut(s) 751
XmaJI CCTAGG 1 cut(s) 1088
XmnI GAANNNNTTC 2 cut(s) 150, 237
XspI CTAG 5 cut(s) 131, 255, 348, 1089, 1254
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.