Rmu_sc0009185.1_g000029

Ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0009185.1
OG0000172
Physical Location & Seq
Reverse (-)
130388 .. 134307
3920 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0009185.1_g000029.1.cds

Sequence Viewer

Length: 1203 bp
atgtggaacgcgaaaatcggagttcggaatcctgctctcctcagtcccctctacacgtttgtggtggtgattcgtcgtgggaagcaccgtagacgatgctacaaggccgagaagttgcacgatggagctgcaaatcgcctcaaatggccagccttggttctcccagctccggccactatagctcgaattggcaatctagggttcatcggttttcaaaacttgcgaggtaaattccggccaaatggctttgattctaactttgtgttagttatgaatgttttaattggagttgagatgaagaactttggtgttggaagtttttccaaattccaactttgggccggtggcggtgccgccactgtggtggtgttttccggcggtttccggccacctcagggatggtttgattatcgagtgatcattatcaaagctgaggtgtacgttcgatggcgtggatgtggaagggtgctcctagttttacgtcttccgctgggtagtgagttgtgggacacttcagattcaagagtgttcggagtagggatggcaaaaatccccagcggggcggagctccattggatacctgcccctgatagggggagaattcggggacaaatggggaatgggatggggatccccaatccccgctatctaagattggggatggggcggggatggagaggtgggttgtggagtgttaacaaggagctggtggttctaaatgattatgacggattctcgctcatttttgaggtggcactgatgcatgtgaggaactgggtgcaaatctttacactgcctctgggttacatgacgatgaccactatctctttacttgcagaaactctgggaaaggtgattgtagtggatcagagggcattccgagatgggaagagtagggtctgtctcttgctcaatcacacccgaccattcttgtctagtcctacgcagcacaatgatgcaactactattagattggttactggtggtgcggcggtgagtgcatctcttccttctatggtgtttcgagctaatgatgctccatcattgtcactaactttcaaggttccctcaaagttcatgaaagcgatggcgtccaagcgctcaatggtgatcaaagcaacaaagaaaagttcaataaggagagagaagttgccacggcttactgggatgtgtagagacagagaggatgatgatgaggtgtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00230 ko00670 ko01100 ko01110 ko01130 ko01523 map00230 map00670 map01100 map01110 map01130 map01523
Pfam Domains
Protein Families
DDE_Tnp_1_7 DUF4283 RVT_1 RVT_3 zf-CCHC_4 zf-RVT

Protein Analysis

400

Amino Acids

44.56

Weight (kDa)

10.78

Isoelectric Point (pI)

36.0

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000172)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G59650 AT3G59650
fragaria_vesca FvH4_1g19981 FvH4_1g22221 FvH4_2g13530 FvH4_2g13791 FvH4_2g14332 FvH4_2g14911 FvH4_2g16332 FvH4_3g10980 FvH4_3g11141 FvH4_3g14171 FvH4_3g26311 FvH4_3g28254 FvH4_3g29741 FvH4_4g05261 FvH4_4g12002 FvH4_4g13371 FvH4_4g15541 FvH4_4g18531 FvH4_5g02661 FvH4_5g02662 FvH4_5g16791 FvH4_5g29700 FvH4_5g35881 FvH4_5g37061 FvH4_6g01571 FvH4_6g12761 FvH4_6g14961 FvH4_6g20381 FvH4_6g22001 FvH4_6g23673 FvH4_6g23960 FvH4_6g28051 FvH4_6g31094 FvH4_6g36541 FvH4_7g00911 FvH4_7g06200 FvH4_7g06200 FvH4_7g09551
malus_domestica MD08G1230600.v1.1
prunus_persica Prupe.1G206900_v2.0.a1 Prupe.1G206900_v2.0.a1 Prupe.1G206900_v2.0.a1
pyrus_communis pycom08g20050 pycom15g37590
rosa_chinensis RchiOBHm_Chr1g0333831 RchiOBHm_Chr1g0344871 RchiOBHm_Chr3g0473241 RchiOBHm_Chr5g0018871 RchiOBHm_Chr6g0265791
rosa_laevigata RLG00000005720 RLG00000012718 RLG00000027174 RLG00000029225 RLG00000029527
rosa_multiflora Rmu_co8002714.1_g000001 Rmu_co8072270.1_g000001 Rmu_co8095594.1_g000001 Rmu_co8308871.1_g000001 Rmu_co8398699.1_g000001 Rmu_co8404287.1_g000001 Rmu_sc0000035.1_g000010 Rmu_sc0000133.1_g000007 Rmu_sc0000253.1_g000023 Rmu_sc0000308.1_g000010 Rmu_sc0000309.1_g000030 Rmu_sc0000515.1_g000015 Rmu_sc0000865.1_g000001 Rmu_sc0000889.1_g000005 Rmu_sc0001262.1_g000011 Rmu_sc0001518.1_g000013 Rmu_sc0001533.1_g000006 Rmu_sc0001547.1_g000007 Rmu_sc0001826.1_g000013 Rmu_sc0002060.1_g000017 Rmu_sc0002129.1_g000005 Rmu_sc0002449.1_g000016 Rmu_sc0002460.1_g000036 Rmu_sc0002475.1_g000014 Rmu_sc0002553.1_g000017 Rmu_sc0002759.1_g000033 Rmu_sc0002918.1_g000009 Rmu_sc0002955.1_g000020 Rmu_sc0003094.1_g000010 Rmu_sc0003669.1_g000009 Rmu_sc0004109.1_g000008 Rmu_sc0004350.1_g000007 Rmu_sc0004542.1_g000018 Rmu_sc0004967.1_g000005 Rmu_sc0005026.1_g000005 Rmu_sc0005369.1_g000013 Rmu_sc0005400.1_g000025 Rmu_sc0005420.1_g000006 Rmu_sc0005467.1_g000013 Rmu_sc0005497.1_g000003 Rmu_sc0005607.1_g000023 Rmu_sc0005949.1_g000008 Rmu_sc0005970.1_g000002 Rmu_sc0006452.1_g000001 Rmu_sc0006720.1_g000008 Rmu_sc0006867.1_g000004 Rmu_sc0007177.1_g000006 Rmu_sc0007199.1_g000011 Rmu_sc0007783.1_g000004 Rmu_sc0007885.1_g000006 Rmu_sc0008619.1_g000001 Rmu_sc0008709.1_g000004 Rmu_sc0008709.1_g000005 Rmu_sc0009185.1_g000029 Rmu_sc0010244.1_g000010 Rmu_sc0011610.1_g000005 Rmu_sc0011680.1_g000013 Rmu_sc0012075.1_g000003 Rmu_sc0012278.1_g000001 Rmu_sc0012628.1_g000001 Rmu_sc0018485.1_g000006 Rmu_sc0019960.1_g000001 Rmu_sc0020177.1_g000002 Rmu_sc0020656.1_g000001 Rmu_sc0021333.1_g000003 Rmu_sc0023170.1_g000002 Rmu_sc0023989.1_g000005 Rmu_sc0025259.1_g000001 Rmu_sc0025350.1_g000013 Rmu_sc0029678.1_g000002 Rmu_sc0035939.1_g000001 Rmu_sc0039260.1_g000001 Rmu_sc0039886.1_g000001 Rmu_ssc0000323.1_g000030 Rmu_ssc0000333.1_g000005 Rmu_ssc0000471.1_g000017 Rmu_ssc0000480.1_g000025
rosa_roxburghii Rroxscaffold_1G00006060 Rroxscaffold_1G00048570 Rroxscaffold_1G00057650 Rroxscaffold_1G00072720 Rroxscaffold_4G00281190 Rroxscaffold_4G00317160 Rroxscaffold_6G00411570
rosa_rugosa Rorug01G0004800 Rorug01G0112100 Rorug01G0206100 Rorug02G0324000 Rorug05G0305600 Rorug05G0326800 Rorug06G0018900 Rorug06G0167000 Rorug07G0031200 Rorug07G0071900
rosa_samantha Rh1AG134700 Rh1BG103000 Rh1CG007300 Rh1CG128100 Rh1DG140100 Rh2DG579500 Rh3DG199000 Rh4BG252500 Rh5AG374900 Rh5BG146800 Rh5BG151500 Rh5DG399700
rosa_wichuraiana Rw0G001820 Rw1G011230 Rw1G011240 Rw1G027290 Rw2G011670 Rw2G039270 Rw6G018440 Rw6G023120 Rw7G025180

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 589
AccB1I GGYRCC 1 cut(s) 350
AccI GTMKAC 1 cut(s) 91
AccII CGCG 1 cut(s) 11
AclWI GGATC 3 cut(s) 625, 638, 873
AcoI YGGCCR 4 cut(s) 146, 171, 236, 386
AcsI RAATTY 3 cut(s) 230, 326, 600
AcuI CTGAAG 1 cut(s) 498
AcyI GRCGYC 1 cut(s) 1091
AfaI GTAC 1 cut(s) 440
AfeI AGCGCT 1 cut(s) 1100
AfiI CCNNNNNNNGG 7 cut(s) 169, 337, 395, 559, 591, 592, 593
AflIII ACRYGT 1 cut(s) 54
AgsI TTSAA 4 cut(s) 215, 522, 1060, 1134
AleI CACNNNNGTG 2 cut(s) 59, 362
AluBI AGCT 7 cut(s) 128, 167, 182, 431, 568, 706, 1028
AluI AGCT 7 cut(s) 128, 167, 182, 431, 568, 706, 1028
Alw21I GWGCWC 2 cut(s) 471, 570
Alw26I GTCTC 2 cut(s) 908, 1170
AlwI GGATC 3 cut(s) 625, 638, 873
Aor51HI AGCGCT 1 cut(s) 1100
AoxI GGCC 6 cut(s) 105, 146, 171, 236, 339, 386
ApeKI GCWGC 2 cut(s) 128, 946
ApoI RAATTY 3 cut(s) 230, 326, 600
Asp700I GAANNNNTTC 1 cut(s) 319
AspLEI GCGC 1 cut(s) 1101
AspS9I GGNCC 1 cut(s) 339
AsuHPI GGTGA 4 cut(s) 79, 865, 1006, 1120
AxyI CCTNAGG 1 cut(s) 393
BalI TGGCCA 1 cut(s) 148
BamHI GGATCC 1 cut(s) 630
BanI GGYRCC 1 cut(s) 350
BanII GRGCYC 1 cut(s) 570
BbsI GAAGAC 1 cut(s) 476
Bbv12I GWGCWC 2 cut(s) 471, 570
BbvCI CCTCAGC 1 cut(s) 432
BbvI GCAGC 2 cut(s) 115, 958
BceAI ACGGC 1 cut(s) 1172
BcgI CGANNNNNNTGC 2 cut(s) 110, 144
BciVI GTATCC 1 cut(s) 570
BclI TGATCA 2 cut(s) 417, 1110
BcoDI GTCTC 2 cut(s) 908, 1170
BfaI CTAG 3 cut(s) 197, 473, 936
BfmI CTRYAG 1 cut(s) 177
BfoI RGCGCY 1 cut(s) 1102
BfuAI ACCTGC 1 cut(s) 589
BfuI GTATCC 1 cut(s) 570
BisI GCNGC 4 cut(s) 129, 354, 947, 990
BlsI GCNGC 4 cut(s) 130, 355, 948, 991
BmgT120I GGNCC 1 cut(s) 339
BmiI GGNNCC 3 cut(s) 352, 632, 1065
BmrI ACTGGG 2 cut(s) 784, 1173
BmsI GCATC 5 cut(s) 86, 750, 946, 1010, 1024
BmuI ACTGGG 2 cut(s) 784, 1173
BpiI GAAGAC 1 cut(s) 476
BplI GAGNNNNNCTC 2 cut(s) 988, 1020
Bpu10I CCTNAGC 1 cut(s) 432
BsaBI GATNNNNATC 2 cut(s) 422, 629
BsaHI GRCGYC 1 cut(s) 1091
BsaJI CCNNGG 2 cut(s) 153, 1154
Bsc4I CCNNNNNNNGG 7 cut(s) 169, 337, 395, 559, 591, 592, 593
Bse118I RCCGGY 1 cut(s) 341
Bse1I ACTGG 3 cut(s) 779, 985, 1168
Bse21I CCTNAGG 1 cut(s) 393
Bse8I GATNNNNATC 2 cut(s) 422, 629
BseDI CCNNGG 2 cut(s) 153, 1154
BseGI GGATG 8 cut(s) 404, 461, 546, 630, 666, 677, 1173, 1192
BseJI GATNNNNATC 2 cut(s) 422, 629
BseLI CCNNNNNNNGG 7 cut(s) 169, 337, 395, 559, 591, 592, 593
BseMII CTCAG 3 cut(s) 55, 407, 423
BseNI ACTGG 3 cut(s) 779, 985, 1168
BseRI GAGGAG 1 cut(s) 29
BseXI GCAGC 2 cut(s) 115, 958
BseYI CCCAGC 3 cut(s) 163, 490, 554
Bsh1236I CGCG 1 cut(s) 11
BshFI GGCC 6 cut(s) 107, 148, 173, 238, 341, 388
BshNI GGYRCC 1 cut(s) 350
BsiHKAI GWGCWC 2 cut(s) 471, 570
BsiSI CCGG 5 cut(s) 170, 235, 342, 375, 385
BslFI GGGAC 3 cut(s) 30, 521, 621
BslI CCNNNNNNNGG 7 cut(s) 169, 337, 395, 559, 591, 592, 593
BsmAI GTCTC 2 cut(s) 908, 1170
BsmFI GGGAC 3 cut(s) 30, 521, 621
BsmI GAATGC 1 cut(s) 875
BsnI GGCC 6 cut(s) 107, 148, 173, 238, 341, 388
Bsp1286I GDGCHC 2 cut(s) 471, 570
Bsp143I GATC 4 cut(s) 417, 630, 865, 1110
BspANI GGCC 6 cut(s) 107, 148, 173, 238, 341, 388
BspCNI CTCAG 3 cut(s) 54, 406, 424
BspFNI CGCG 1 cut(s) 11
BspHI TCATGA 1 cut(s) 1077
BspLI GGNNCC 3 cut(s) 352, 632, 1065
BspMI ACCTGC 1 cut(s) 589
BspPI GGATC 3 cut(s) 625, 638, 873
BspT107I GGYRCC 1 cut(s) 350
BsrFI RCCGGY 1 cut(s) 341
BsrI ACTGG 3 cut(s) 779, 985, 1168
BssAI RCCGGY 1 cut(s) 341
BssECI CCNNGG 2 cut(s) 153, 1154
BssMI GATC 4 cut(s) 417, 630, 865, 1110
BssNI GRCGYC 1 cut(s) 1091
BssT1I CCWWGG 1 cut(s) 153
Bst4CI ACNGT 2 cut(s) 89, 361
Bst6I CTCTTC 2 cut(s) 884, 1011
BstACI GRCGYC 1 cut(s) 1091
BstC8I GCNNGC 1 cut(s) 150
BstDEI CTNAG 4 cut(s) 41, 393, 432, 650
BstDSI CCRYGG 1 cut(s) 1154
BstF5I GGATG 8 cut(s) 404, 461, 546, 630, 666, 677, 1173, 1192
BstFNI CGCG 1 cut(s) 11
BstH2I RGCGCY 1 cut(s) 1102
BstHHI GCGC 1 cut(s) 1101
BstKTI GATC 4 cut(s) 420, 633, 868, 1113
BstMAI GTCTC 2 cut(s) 908, 1170
BstMBI GATC 4 cut(s) 417, 630, 865, 1110
BstMWI GCNNNNNNNGC 3 cut(s) 179, 998, 1034
BstNSI RCATGY 1 cut(s) 767
BstSFI CTRYAG 1 cut(s) 177
BstUI CGCG 1 cut(s) 11
BstV1I GCAGC 2 cut(s) 115, 958
BstV2I GAAGAC 1 cut(s) 476
BstX2I RGATCY 1 cut(s) 630
BstXI CCANNNNNNTGG 1 cut(s) 364
BstYI RGATCY 1 cut(s) 630
Bsu36I CCTNAGG 1 cut(s) 393
BsuI GTATCC 1 cut(s) 570
BsuRI GGCC 6 cut(s) 107, 148, 173, 238, 341, 388
BtgI CCRYGG 1 cut(s) 1154
BtgZI GCGATG 1 cut(s) 1100
BtsCI GGATG 8 cut(s) 404, 461, 546, 630, 666, 677, 1173, 1192
BtsI GCAGTG 1 cut(s) 791
BtsIMutI CAGTG 3 cut(s) 357, 755, 791
BveI ACCTGC 1 cut(s) 589
Cac8I GCNNGC 1 cut(s) 150
CciI TCATGA 1 cut(s) 1077
CfoI GCGC 1 cut(s) 1101
Cfr10I RCCGGY 1 cut(s) 341
Cfr13I GGNCC 1 cut(s) 339
CseI GACGC 1 cut(s) 1080
Csp6I GTAC 1 cut(s) 439
CviAII CATG 3 cut(s) 764, 808, 1078
CviQI GTAC 1 cut(s) 439
DdeI CTNAG 4 cut(s) 41, 393, 432, 650
DpnI GATC 4 cut(s) 419, 632, 867, 1112
DpnII GATC 4 cut(s) 417, 630, 865, 1110
EaeI YGGCCR 4 cut(s) 146, 171, 236, 386
Eam1104I CTCTTC 2 cut(s) 884, 1011
EarI CTCTTC 2 cut(s) 884, 1011
EciI GGCGGA 1 cut(s) 578
Ecl136II GAGCTC 1 cut(s) 568
Eco130I CCWWGG 1 cut(s) 153
Eco24I GRGCYC 1 cut(s) 570
Eco47III AGCGCT 1 cut(s) 1100
Eco53kI GAGCTC 1 cut(s) 568
Eco57I CTGAAG 1 cut(s) 498
Eco81I CCTNAGG 1 cut(s) 393
EcoICRI GAGCTC 1 cut(s) 568
EcoRI GAATTC 1 cut(s) 600
EcoT14I CCWWGG 1 cut(s) 153
EcoT22I ATGCAT 1 cut(s) 765
EcoT38I GRGCYC 1 cut(s) 570
ErhI CCWWGG 1 cut(s) 153
FaeI CATG 3 cut(s) 767, 811, 1081
FaiI YATR 7 cut(s) 179, 272, 726, 765, 809, 1016, 1079
FaqI GGGAC 3 cut(s) 30, 521, 621
FatI CATG 3 cut(s) 763, 807, 1077
FauI CCCGC 3 cut(s) 551, 650, 660
FbaI TGATCA 2 cut(s) 417, 1110
FblI GTMKAC 1 cut(s) 91
Fnu4HI GCNGC 4 cut(s) 129, 354, 947, 990
FokI GGATG 8 cut(s) 411, 468, 553, 637, 673, 684, 1180, 1199
FriOI GRGCYC 1 cut(s) 570
Fsp4HI GCNGC 4 cut(s) 129, 354, 947, 990
FspBI CTAG 3 cut(s) 197, 473, 936
GlaI GCGC 1 cut(s) 1100
GluI GCNGC 4 cut(s) 129, 354, 947, 990
GsaI CCCAGC 3 cut(s) 167, 494, 558
HaeII RGCGCY 1 cut(s) 1102
HaeIII GGCC 6 cut(s) 107, 148, 173, 238, 341, 388
HapII CCGG 5 cut(s) 170, 235, 342, 375, 385
HgaI GACGC 1 cut(s) 1080
HhaI GCGC 1 cut(s) 1101
Hin1I GRCGYC 1 cut(s) 1091
Hin1II CATG 3 cut(s) 767, 811, 1081
Hin6I GCGC 1 cut(s) 1099
HinP1I GCGC 1 cut(s) 1099
HincII GTYRAC 1 cut(s) 697
HindII GTYRAC 1 cut(s) 697
HinfI GANTC 5 cut(s) 28, 70, 251, 518, 732
HpaI GTTAAC 1 cut(s) 697
HpaII CCGG 5 cut(s) 170, 235, 342, 375, 385
HphI GGTGA 4 cut(s) 79, 865, 1006, 1120
Hpy166II GTNNAC 3 cut(s) 92, 439, 697
Hpy188I TCNGA 6 cut(s) 20, 27, 517, 533, 870, 881
Hpy188III TCNNGA 2 cut(s) 522, 1078
Hpy8I GTNNAC 3 cut(s) 92, 439, 697
Hpy99I CGWCG 1 cut(s) 78
HpyAV CCTTC 2 cut(s) 456, 1020
HpyCH4III ACNGT 2 cut(s) 89, 361
HpyCH4IV ACGT 3 cut(s) 56, 441, 481
HpyCH4V TGCA 7 cut(s) 118, 131, 763, 781, 836, 959, 1001
HpyF10VI GCNNNNNNNGC 3 cut(s) 179, 998, 1034
HpyF3I CTNAG 4 cut(s) 41, 393, 432, 650
HpySE526I ACGT 3 cut(s) 56, 441, 481
Hsp92I GRCGYC 1 cut(s) 1091
Hsp92II CATG 3 cut(s) 767, 811, 1081
HspAI GCGC 1 cut(s) 1099
Ksp22I TGATCA 2 cut(s) 417, 1110
KspAI GTTAAC 1 cut(s) 697
Kzo9I GATC 4 cut(s) 417, 630, 865, 1110
LmnI GCTCC 7 cut(s) 125, 172, 474, 565, 573, 703, 1042
Lsp1109I GCAGC 2 cut(s) 115, 958
LweI GCATC 5 cut(s) 86, 750, 946, 1010, 1024
MaeI CTAG 3 cut(s) 197, 473, 936
MaeII ACGT 3 cut(s) 56, 441, 481
MaeIII GTNAC 3 cut(s) 803, 976, 1047
MalI GATC 4 cut(s) 419, 632, 867, 1112
MboI GATC 4 cut(s) 417, 630, 865, 1110
MboII GAAGA 4 cut(s) 310, 476, 901, 998
MflI RGATCY 1 cut(s) 630
MhlI GDGCHC 2 cut(s) 471, 570
MlsI TGGCCA 1 cut(s) 148
MluCI AATT 5 cut(s) 186, 230, 282, 326, 600
MluNI TGGCCA 1 cut(s) 148
MmeI TCCRAC 2 cut(s) 292, 355
Mox20I TGGCCA 1 cut(s) 148
Mph1103I ATGCAT 1 cut(s) 765
MroXI GAANNNNTTC 1 cut(s) 319
MscI TGGCCA 1 cut(s) 148
MseI TTAA 2 cut(s) 281, 696
MslI CAYNNNNRTG 4 cut(s) 59, 362, 812, 954
Msp20I TGGCCA 1 cut(s) 148
MspA1I CMGCKG 2 cut(s) 490, 558
MspI CCGG 5 cut(s) 170, 235, 342, 375, 385
Mva1269I GAATGC 1 cut(s) 875
MvnI CGCG 1 cut(s) 11
MwoI GCNNNNNNNGC 3 cut(s) 179, 998, 1034
NdeII GATC 4 cut(s) 417, 630, 865, 1110
NlaIII CATG 3 cut(s) 767, 811, 1081
NlaIV GGNNCC 3 cut(s) 352, 632, 1065
NmeAIII GCCGAG 1 cut(s) 133
NmuCI GTSAC 1 cut(s) 1047
NsiI ATGCAT 1 cut(s) 765
NspI RCATGY 1 cut(s) 767
OliI CACNNNNGTG 2 cut(s) 59, 362
PagI TCATGA 1 cut(s) 1077
PctI GAATGC 1 cut(s) 875
PdmI GAANNNNTTC 1 cut(s) 319
PfeI GAWTC 5 cut(s) 28, 70, 251, 518, 732
PkrI GCNGC 4 cut(s) 130, 355, 948, 991
Psp124BI GAGCTC 1 cut(s) 570
PspFI CCCAGC 3 cut(s) 163, 490, 554
PspN4I GGNNCC 3 cut(s) 352, 632, 1065
PspPI GGNCC 1 cut(s) 339
PsuI RGATCY 1 cut(s) 630
RsaI GTAC 1 cut(s) 440
RsaNI GTAC 1 cut(s) 439
RseI CAYNNNNRTG 4 cut(s) 59, 362, 812, 954
SacI GAGCTC 1 cut(s) 570
SaqAI TTAA 2 cut(s) 281, 696
SatI GCNGC 4 cut(s) 129, 354, 947, 990
Sau3AI GATC 4 cut(s) 417, 630, 865, 1110
Sau96I GGNCC 1 cut(s) 339
SduI GDGCHC 2 cut(s) 471, 570
SfaNI GCATC 5 cut(s) 86, 750, 946, 1010, 1024
SfcI CTRYAG 1 cut(s) 177
SmiMI CAYNNNNRTG 4 cut(s) 59, 362, 812, 954
Sse9I AATT 5 cut(s) 186, 230, 282, 326, 600
SspMI CTAG 3 cut(s) 197, 473, 936
SstI GAGCTC 1 cut(s) 570
StyI CCWWGG 1 cut(s) 153
TaaI ACNGT 2 cut(s) 89, 361
TaiI ACGT 3 cut(s) 59, 444, 484
TaqI TCGA 4 cut(s) 184, 412, 445, 1024
TasI AATT 5 cut(s) 186, 230, 282, 326, 600
TauI GCSGC 2 cut(s) 356, 992
TfiI GAWTC 5 cut(s) 28, 70, 251, 518, 732
Tru1I TTAA 2 cut(s) 281, 696
Tru9I TTAA 2 cut(s) 281, 696
TscAI CASTG 3 cut(s) 364, 762, 798
TseFI GTSAC 1 cut(s) 1047
TseI GCWGC 2 cut(s) 128, 946
Tsp45I GTSAC 1 cut(s) 1047
TspDTI ATGAA 5 cut(s) 193, 287, 311, 1066, 1094
TspGWI ACGGA 1 cut(s) 744
TspRI CASTG 3 cut(s) 364, 762, 798
XapI RAATTY 3 cut(s) 230, 326, 600
XceI RCATGY 1 cut(s) 767
XcmI CCANNNNNNNNNTGG 2 cut(s) 396, 1102
XmiI GTMKAC 1 cut(s) 91
XmnI GAANNNNTTC 1 cut(s) 319
XspI CTAG 3 cut(s) 197, 473, 936
Zsp2I ATGCAT 1 cut(s) 765
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.