Rmu_sc0006867.1_g000004

Ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006867.1
OG0000172
Physical Location & Seq
Reverse (-)
41606 .. 42958
1353 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0006867.1_g000004.1.cds

Sequence Viewer

Length: 924 bp
atgactgccaggctagcgaccaagttgtctctcagagagggtgaagaaccggtggacttggggaaccttagggttctggggaaggaatttcttgctctcaatttttacttggtggggaaactcaatacctacagggcggtggttttggatttgttccggagtgcgattggagaggtcctggaggtggattggttggctcttcgtcatggggaagctcgagttaggcttattctctccatccatgacccagtgcgccttgatcgtagggttagggtttctcccacggacgtcctaatgttgcggttccggtatgagcgattgctagggcgttgcaggctgtgcgctctcttgaatcatggagggcagcgatgccctagggaggaggagtcgaacaccgatactgtggtggatgacggcttgcagcagacttcggggacggctctccccgccatcgtgtttctggccaactcccacccctctccttccttgctttcgactttcaaggttcctaacctgctgaagaagaaacaagtgcagatccgtcgtcttcctgaattgatggctctgcctgggtcggagggcacatccgcttctgatccagtagtaggggtgcgccgccctagggaggaggtggatacggaggttagtaagaaagctaaacactgtctagctattgctccggccactgtgcagccggaaaatgttgggttagaattctcctctgatggtttggtggaagtgaaggtgacgtcacctcccaaggtttataagaagaaaggtaggcctcggggacagaggaacaaggttaagcaggtgacgtctgtgagcggtggctcttccttggtctcggctgtggaaggtcctggaagtatgcatggtatgcaggagggagtggcatctttgcctgcttcaaagtccgagtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00230 ko00670 ko01100 ko01110 ko01130 ko01523 map00230 map00670 map01100 map01110 map01130 map01523
Pfam Domains
Protein Families
DDE_Tnp_1_7 DUF4283 RVT_1 RVT_3 zf-CCHC_4 zf-RVT

Protein Analysis

307

Amino Acids

33.6

Weight (kDa)

9.64

Isoelectric Point (pI)

42.61

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000172)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G59650 AT3G59650
fragaria_vesca FvH4_1g19981 FvH4_1g22221 FvH4_2g13530 FvH4_2g13791 FvH4_2g14332 FvH4_2g14911 FvH4_2g16332 FvH4_3g10980 FvH4_3g11141 FvH4_3g14171 FvH4_3g26311 FvH4_3g28254 FvH4_3g29741 FvH4_4g05261 FvH4_4g12002 FvH4_4g13371 FvH4_4g15541 FvH4_4g18531 FvH4_5g02661 FvH4_5g02662 FvH4_5g16791 FvH4_5g29700 FvH4_5g35881 FvH4_5g37061 FvH4_6g01571 FvH4_6g12761 FvH4_6g14961 FvH4_6g20381 FvH4_6g22001 FvH4_6g23673 FvH4_6g23960 FvH4_6g28051 FvH4_6g31094 FvH4_6g36541 FvH4_7g00911 FvH4_7g06200 FvH4_7g06200 FvH4_7g09551
malus_domestica MD08G1230600.v1.1
prunus_persica Prupe.1G206900_v2.0.a1 Prupe.1G206900_v2.0.a1 Prupe.1G206900_v2.0.a1
pyrus_communis pycom08g20050 pycom15g37590
rosa_chinensis RchiOBHm_Chr1g0333831 RchiOBHm_Chr1g0344871 RchiOBHm_Chr3g0473241 RchiOBHm_Chr5g0018871 RchiOBHm_Chr6g0265791
rosa_laevigata RLG00000005720 RLG00000012718 RLG00000027174 RLG00000029225 RLG00000029527
rosa_multiflora Rmu_co8002714.1_g000001 Rmu_co8072270.1_g000001 Rmu_co8095594.1_g000001 Rmu_co8308871.1_g000001 Rmu_co8398699.1_g000001 Rmu_co8404287.1_g000001 Rmu_sc0000035.1_g000010 Rmu_sc0000133.1_g000007 Rmu_sc0000253.1_g000023 Rmu_sc0000308.1_g000010 Rmu_sc0000309.1_g000030 Rmu_sc0000515.1_g000015 Rmu_sc0000865.1_g000001 Rmu_sc0000889.1_g000005 Rmu_sc0001262.1_g000011 Rmu_sc0001518.1_g000013 Rmu_sc0001533.1_g000006 Rmu_sc0001547.1_g000007 Rmu_sc0001826.1_g000013 Rmu_sc0002060.1_g000017 Rmu_sc0002129.1_g000005 Rmu_sc0002449.1_g000016 Rmu_sc0002460.1_g000036 Rmu_sc0002475.1_g000014 Rmu_sc0002553.1_g000017 Rmu_sc0002759.1_g000033 Rmu_sc0002918.1_g000009 Rmu_sc0002955.1_g000020 Rmu_sc0003094.1_g000010 Rmu_sc0003669.1_g000009 Rmu_sc0004109.1_g000008 Rmu_sc0004350.1_g000007 Rmu_sc0004542.1_g000018 Rmu_sc0004967.1_g000005 Rmu_sc0005026.1_g000005 Rmu_sc0005369.1_g000013 Rmu_sc0005400.1_g000025 Rmu_sc0005420.1_g000006 Rmu_sc0005467.1_g000013 Rmu_sc0005497.1_g000003 Rmu_sc0005607.1_g000023 Rmu_sc0005949.1_g000008 Rmu_sc0005970.1_g000002 Rmu_sc0006452.1_g000001 Rmu_sc0006720.1_g000008 Rmu_sc0006867.1_g000004 Rmu_sc0007177.1_g000006 Rmu_sc0007199.1_g000011 Rmu_sc0007783.1_g000004 Rmu_sc0007885.1_g000006 Rmu_sc0008619.1_g000001 Rmu_sc0008709.1_g000004 Rmu_sc0008709.1_g000005 Rmu_sc0009185.1_g000029 Rmu_sc0010244.1_g000010 Rmu_sc0011610.1_g000005 Rmu_sc0011680.1_g000013 Rmu_sc0012075.1_g000003 Rmu_sc0012278.1_g000001 Rmu_sc0012628.1_g000001 Rmu_sc0018485.1_g000006 Rmu_sc0019960.1_g000001 Rmu_sc0020177.1_g000002 Rmu_sc0020656.1_g000001 Rmu_sc0021333.1_g000003 Rmu_sc0023170.1_g000002 Rmu_sc0023989.1_g000005 Rmu_sc0025259.1_g000001 Rmu_sc0025350.1_g000013 Rmu_sc0029678.1_g000002 Rmu_sc0035939.1_g000001 Rmu_sc0039260.1_g000001 Rmu_sc0039886.1_g000001 Rmu_ssc0000323.1_g000030 Rmu_ssc0000333.1_g000005 Rmu_ssc0000471.1_g000017 Rmu_ssc0000480.1_g000025
rosa_roxburghii Rroxscaffold_1G00006060 Rroxscaffold_1G00048570 Rroxscaffold_1G00057650 Rroxscaffold_1G00072720 Rroxscaffold_4G00281190 Rroxscaffold_4G00317160 Rroxscaffold_6G00411570
rosa_rugosa Rorug01G0004800 Rorug01G0112100 Rorug01G0206100 Rorug02G0324000 Rorug05G0305600 Rorug05G0326800 Rorug06G0018900 Rorug06G0167000 Rorug07G0031200 Rorug07G0071900
rosa_samantha Rh1AG134700 Rh1BG103000 Rh1CG007300 Rh1CG128100 Rh1DG140100 Rh2DG579500 Rh3DG199000 Rh4BG252500 Rh5AG374900 Rh5BG146800 Rh5BG151500 Rh5DG399700
rosa_wichuraiana Rw0G001820 Rw1G011230 Rw1G011240 Rw1G027290 Rw2G011670 Rw2G039270 Rw6G018440 Rw6G023120 Rw7G025180

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 768
AarI CACCTGC 1 cut(s) 802
AasI GACNNNNNNGTC 1 cut(s) 25
AatII GACGTC 3 cut(s) 291, 752, 821
Acc36I ACCTGC 2 cut(s) 522, 802
AccBSI CCGCTC 1 cut(s) 828
AccIII TCCGGA 1 cut(s) 156
AciI CCGC 6 cut(s) 137, 301, 447, 588, 616, 828
AclWI GGATC 2 cut(s) 532, 590
AcoI YGGCCR 2 cut(s) 462, 681
AcsI RAATTY 2 cut(s) 86, 713
AcuI CTGAAG 1 cut(s) 539
AcyI GRCGYC 3 cut(s) 288, 749, 818
AfiI CCNNNNNNNGG 5 cut(s) 184, 379, 605, 622, 625
AgeI ACCGGT 1 cut(s) 49
AgsI TTSAA 3 cut(s) 352, 502, 912
AjnI CCWGG 4 cut(s) 8, 177, 568, 862
AluBI AGCT 3 cut(s) 215, 656, 671
AluI AGCT 3 cut(s) 215, 656, 671
Alw26I GTCTC 2 cut(s) 33, 850
AlwI GGATC 2 cut(s) 532, 590
Ama87I CYCGRG 2 cut(s) 216, 786
Aor13HI TCCGGA 1 cut(s) 156
AoxI GGCC 3 cut(s) 462, 681, 782
ApeKI GCWGC 3 cut(s) 364, 421, 691
ApoI RAATTY 2 cut(s) 86, 713
AsiGI ACCGGT 1 cut(s) 49
AspA2I CCTAGG 2 cut(s) 374, 620
AspLEI GCGC 3 cut(s) 255, 344, 615
AspS9I GGNCC 2 cut(s) 175, 860
AsuHPI GGTGA 4 cut(s) 53, 744, 757, 826
AsuNHI GCTAGC 1 cut(s) 13
AvaI CYCGRG 2 cut(s) 216, 786
AvaII GGWCC 2 cut(s) 175, 860
AvrII CCTAGG 2 cut(s) 374, 620
AxyI CCTNAGG 1 cut(s) 68
BaeGI GKGCMC 1 cut(s) 584
BaeI ACNNNNGTAYC 4 cut(s) 390, 423, 627, 660
BalI TGGCCA 1 cut(s) 464
BbsI GAAGAC 1 cut(s) 539
BbvI GCAGC 3 cut(s) 376, 433, 703
BccI CCATC 4 cut(s) 245, 458, 553, 719
BceAI ACGGC 2 cut(s) 430, 453
BcgI CGANNNNNNTGC 2 cut(s) 524, 558
BciT130I CCWGG 4 cut(s) 10, 179, 570, 864
BciVI GTATCC 1 cut(s) 628
BcoDI GTCTC 2 cut(s) 33, 850
BfaI CTAG 5 cut(s) 14, 323, 375, 621, 668
BfmI CTRYAG 1 cut(s) 130
BfuAI ACCTGC 2 cut(s) 522, 802
BfuI GTATCC 1 cut(s) 628
BisI GCNGC 4 cut(s) 365, 422, 616, 692
BlnI CCTAGG 2 cut(s) 374, 620
BlsI GCNGC 4 cut(s) 366, 423, 617, 693
Bme1390I CCNGG 4 cut(s) 10, 179, 570, 864
Bme18I GGWCC 2 cut(s) 175, 860
BmeT110I CYCGRG 2 cut(s) 216, 786
BmgT120I GGNCC 2 cut(s) 175, 860
BmiI GGNNCC 3 cut(s) 65, 305, 507
BmrFI CCNGG 4 cut(s) 10, 179, 570, 864
BmrI ACTGGG 1 cut(s) 242
BmsI GCATC 2 cut(s) 359, 905
BmtI GCTAGC 1 cut(s) 17
BmuI ACTGGG 1 cut(s) 242
BpiI GAAGAC 1 cut(s) 539
BpmI CTGGAG 1 cut(s) 200
BsaHI GRCGYC 3 cut(s) 288, 749, 818
BsaI GGTCTC 1 cut(s) 850
BsaJI CCNNGG 7 cut(s) 282, 374, 569, 620, 759, 785, 840
BsaWI WCCGGW 3 cut(s) 49, 156, 306
BsaXI ACNNNNNCTCC 4 cut(s) 371, 401, 739, 769
Bsc4I CCNNNNNNNGG 5 cut(s) 184, 379, 605, 622, 625
Bse118I RCCGGY 1 cut(s) 49
Bse1I ACTGG 2 cut(s) 248, 599
Bse21I CCTNAGG 1 cut(s) 68
BseAI TCCGGA 1 cut(s) 156
BseBI CCWGG 4 cut(s) 10, 179, 570, 864
BseDI CCNNGG 7 cut(s) 282, 374, 569, 620, 759, 785, 840
BseGI GGATG 3 cut(s) 237, 415, 584
BseLI CCNNNNNNNGG 5 cut(s) 184, 379, 605, 622, 625
BseMII CTCAG 1 cut(s) 46
BseNI ACTGG 2 cut(s) 248, 599
BseRI GAGGAG 4 cut(s) 395, 398, 641, 709
BseSI GKGCMC 1 cut(s) 584
BseXI GCAGC 3 cut(s) 376, 433, 703
BsgI GTGCAG 2 cut(s) 554, 710
BshFI GGCC 3 cut(s) 464, 683, 784
BshTI ACCGGT 1 cut(s) 49
BsiHKCI CYCGRG 2 cut(s) 216, 786
BsiSI CCGG 5 cut(s) 50, 157, 307, 680, 695
BslFI GGGAC 2 cut(s) 448, 804
BslI CCNNNNNNNGG 5 cut(s) 184, 379, 605, 622, 625
BsmAI GTCTC 2 cut(s) 33, 850
BsmFI GGGAC 2 cut(s) 448, 804
BsnI GGCC 3 cut(s) 464, 683, 784
Bso31I GGTCTC 1 cut(s) 850
BsoBI CYCGRG 2 cut(s) 216, 786
Bsp1286I GDGCHC 1 cut(s) 584
Bsp13I TCCGGA 1 cut(s) 156
Bsp143I GATC 3 cut(s) 259, 537, 595
BspACI CCGC 6 cut(s) 137, 301, 447, 588, 616, 828
BspANI GGCC 3 cut(s) 464, 683, 784
BspCNI CTCAG 1 cut(s) 45
BspEI TCCGGA 1 cut(s) 156
BspLI GGNNCC 3 cut(s) 65, 305, 507
BspMI ACCTGC 2 cut(s) 522, 802
BspOI GCTAGC 1 cut(s) 17
BspPI GGATC 2 cut(s) 532, 590
BspQI GCTCTTC 2 cut(s) 204, 841
BspTNI GGTCTC 1 cut(s) 850
BsrBI CCGCTC 1 cut(s) 828
BsrFI RCCGGY 1 cut(s) 49
BsrI ACTGG 2 cut(s) 248, 599
BssAI RCCGGY 1 cut(s) 49
BssECI CCNNGG 7 cut(s) 282, 374, 569, 620, 759, 785, 840
BssMI GATC 3 cut(s) 259, 537, 595
BssNI GRCGYC 3 cut(s) 288, 749, 818
BssT1I CCWWGG 4 cut(s) 374, 620, 759, 840
Bst2UI CCWGG 4 cut(s) 10, 179, 570, 864
Bst4CI ACNGT 3 cut(s) 403, 665, 688
Bst6I CTCTTC 2 cut(s) 204, 841
BstACI GRCGYC 3 cut(s) 288, 749, 818
BstAPI GCANNNNNTGC 2 cut(s) 339, 880
BstC8I GCNNGC 4 cut(s) 15, 335, 419, 906
BstDEI CTNAG 2 cut(s) 32, 68
BstDSI CCRYGG 1 cut(s) 282
BstF5I GGATG 3 cut(s) 237, 415, 584
BstHHI GCGC 3 cut(s) 255, 344, 615
BstKTI GATC 3 cut(s) 262, 540, 598
BstMAI GTCTC 2 cut(s) 33, 850
BstMBI GATC 3 cut(s) 259, 537, 595
BstMWI GCNNNNNNNGC 5 cut(s) 14, 334, 339, 446, 880
BstNI CCWGG 4 cut(s) 10, 179, 570, 864
BstSCI CCNGG 4 cut(s) 8, 177, 568, 862
BstSFI CTRYAG 1 cut(s) 130
BstSLI GKGCMC 1 cut(s) 584
BstV1I GCAGC 3 cut(s) 376, 433, 703
BstV2I GAAGAC 1 cut(s) 539
BstX2I RGATCY 1 cut(s) 537
BstYI RGATCY 1 cut(s) 537
Bsu36I CCTNAGG 1 cut(s) 68
BsuI GTATCC 1 cut(s) 628
BsuRI GGCC 3 cut(s) 464, 683, 784
BtgI CCRYGG 1 cut(s) 282
BtgZI GCGATG 1 cut(s) 382
BtsCI GGATG 3 cut(s) 237, 415, 584
BtsIMutI CAGTG 3 cut(s) 255, 661, 684
BveI ACCTGC 2 cut(s) 522, 802
Cac8I GCNNGC 4 cut(s) 15, 335, 419, 906
CfoI GCGC 3 cut(s) 255, 344, 615
Cfr10I RCCGGY 1 cut(s) 49
Cfr13I GGNCC 2 cut(s) 175, 860
CspAI ACCGGT 1 cut(s) 49
CviAII CATG 4 cut(s) 206, 242, 356, 875
DdeI CTNAG 2 cut(s) 32, 68
DpnI GATC 3 cut(s) 261, 539, 597
DpnII GATC 3 cut(s) 259, 537, 595
DrdI GACNNNNNNGTC 1 cut(s) 25
DseDI GACNNNNNNGTC 1 cut(s) 25
EaeI YGGCCR 2 cut(s) 462, 681
Eam1104I CTCTTC 2 cut(s) 204, 841
EarI CTCTTC 2 cut(s) 204, 841
Eco130I CCWWGG 4 cut(s) 374, 620, 759, 840
Eco147I AGGCCT 1 cut(s) 784
Eco31I GGTCTC 1 cut(s) 850
Eco47I GGWCC 2 cut(s) 175, 860
Eco57I CTGAAG 1 cut(s) 539
Eco81I CCTNAGG 1 cut(s) 68
Eco88I CYCGRG 2 cut(s) 216, 786
EcoO109I RGGNCCY 2 cut(s) 175, 860
EcoRI GAATTC 1 cut(s) 713
EcoRII CCWGG 4 cut(s) 8, 177, 568, 862
EcoT14I CCWWGG 4 cut(s) 374, 620, 759, 840
EcoT22I ATGCAT 1 cut(s) 876
ErhI CCWWGG 4 cut(s) 374, 620, 759, 840
FaeI CATG 4 cut(s) 209, 245, 359, 878
FaiI YATR 8 cut(s) 207, 243, 312, 357, 768, 872, 876, 881
FaqI GGGAC 2 cut(s) 448, 804
FatI CATG 4 cut(s) 205, 241, 355, 874
FauI CCCGC 1 cut(s) 454
Fnu4HI GCNGC 4 cut(s) 365, 422, 616, 692
FokI GGATG 3 cut(s) 224, 422, 571
Fsp4HI GCNGC 4 cut(s) 365, 422, 616, 692
FspBI CTAG 5 cut(s) 14, 323, 375, 621, 668
GlaI GCGC 3 cut(s) 254, 343, 614
GluI GCNGC 4 cut(s) 365, 422, 616, 692
GsuI CTGGAG 1 cut(s) 200
HaeIII GGCC 3 cut(s) 464, 683, 784
HapII CCGG 5 cut(s) 50, 157, 307, 680, 695
HhaI GCGC 3 cut(s) 255, 344, 615
Hin1I GRCGYC 3 cut(s) 288, 749, 818
Hin1II CATG 4 cut(s) 209, 245, 359, 878
Hin6I GCGC 3 cut(s) 253, 342, 613
HinP1I GCGC 3 cut(s) 253, 342, 613
HinfI GANTC 2 cut(s) 352, 386
HpaII CCGG 5 cut(s) 50, 157, 307, 680, 695
HphI GGTGA 4 cut(s) 53, 744, 757, 826
Hpy166II GTNNAC 1 cut(s) 55
Hpy188I TCNGA 5 cut(s) 35, 577, 595, 724, 919
Hpy188III TCNNGA 3 cut(s) 157, 349, 551
Hpy8I GTNNAC 1 cut(s) 55
Hpy99I CGWCG 1 cut(s) 546
HpyAV CCTTC 4 cut(s) 76, 492, 736, 851
HpyCH4III ACNGT 3 cut(s) 403, 665, 688
HpyCH4IV ACGT 3 cut(s) 288, 749, 818
HpyCH4V TGCA 6 cut(s) 333, 421, 535, 691, 874, 883
HpyF10VI GCNNNNNNNGC 5 cut(s) 14, 334, 339, 446, 880
HpyF3I CTNAG 2 cut(s) 32, 68
HpySE526I ACGT 3 cut(s) 288, 749, 818
Hsp92I GRCGYC 3 cut(s) 288, 749, 818
Hsp92II CATG 4 cut(s) 209, 245, 359, 878
HspAI GCGC 3 cut(s) 253, 342, 613
Kpn2I TCCGGA 1 cut(s) 156
Kzo9I GATC 3 cut(s) 259, 537, 595
LguI GCTCTTC 2 cut(s) 204, 841
LmnI GCTCC 1 cut(s) 682
Lsp1109I GCAGC 3 cut(s) 376, 433, 703
LweI GCATC 2 cut(s) 359, 905
MaeI CTAG 5 cut(s) 14, 323, 375, 621, 668
MaeII ACGT 3 cut(s) 288, 749, 818
MaeIII GTNAC 3 cut(s) 745, 750, 814
MalI GATC 3 cut(s) 261, 539, 597
MbiI CCGCTC 1 cut(s) 828
MboI GATC 3 cut(s) 259, 537, 595
MboII GAAGA 7 cut(s) 56, 191, 532, 535, 539, 784, 828
MflI RGATCY 1 cut(s) 537
MhlI GDGCHC 1 cut(s) 584
MlsI TGGCCA 1 cut(s) 464
MluCI AATT 4 cut(s) 86, 100, 554, 713
MluNI TGGCCA 1 cut(s) 464
MlyI GAGTC 1 cut(s) 395
MmeI TCCRAC 1 cut(s) 555
Mox20I TGGCCA 1 cut(s) 464
Mph1103I ATGCAT 1 cut(s) 876
MroI TCCGGA 1 cut(s) 156
MscI TGGCCA 1 cut(s) 464
MseI TTAA 1 cut(s) 807
Msp20I TGGCCA 1 cut(s) 464
MspI CCGG 5 cut(s) 50, 157, 307, 680, 695
MspR9I CCNGG 4 cut(s) 10, 179, 570, 864
MvaI CCWGG 4 cut(s) 10, 179, 570, 864
MwoI GCNNNNNNNGC 5 cut(s) 14, 334, 339, 446, 880
NdeII GATC 3 cut(s) 259, 537, 595
NheI GCTAGC 1 cut(s) 13
NlaIII CATG 4 cut(s) 209, 245, 359, 878
NlaIV GGNNCC 3 cut(s) 65, 305, 507
NmeAIII GCCGAG 1 cut(s) 827
NmuCI GTSAC 3 cut(s) 745, 750, 814
NsiI ATGCAT 1 cut(s) 876
PaeR7I CTCGAG 1 cut(s) 216
PaqCI CACCTGC 1 cut(s) 802
PceI AGGCCT 1 cut(s) 784
PciSI GCTCTTC 2 cut(s) 204, 841
PfeI GAWTC 1 cut(s) 352
PfoI TCCNGGA 2 cut(s) 177, 862
PinAI ACCGGT 1 cut(s) 49
PkrI GCNGC 4 cut(s) 366, 423, 617, 693
PleI GAGTC 1 cut(s) 394
PpsI GAGTC 1 cut(s) 394
PpuMI RGGWCCY 2 cut(s) 175, 860
PsiI TTATAA 1 cut(s) 768
Psp5II RGGWCCY 2 cut(s) 175, 860
Psp6I CCWGG 4 cut(s) 8, 177, 568, 862
PspGI CCWGG 4 cut(s) 8, 177, 568, 862
PspN4I GGNNCC 3 cut(s) 65, 305, 507
PspPI GGNCC 2 cut(s) 175, 860
PspPPI RGGWCCY 2 cut(s) 175, 860
PspXI VCTCGAGB 1 cut(s) 216
PsuI RGATCY 1 cut(s) 537
SapI GCTCTTC 2 cut(s) 204, 841
SaqAI TTAA 1 cut(s) 807
SatI GCNGC 4 cut(s) 365, 422, 616, 692
Sau3AI GATC 3 cut(s) 259, 537, 595
Sau96I GGNCC 2 cut(s) 175, 860
SchI GAGTC 1 cut(s) 395
ScrFI CCNGG 4 cut(s) 10, 179, 570, 864
SduI GDGCHC 1 cut(s) 584
SfaNI GCATC 2 cut(s) 359, 905
SfcI CTRYAG 1 cut(s) 130
Sfr274I CTCGAG 1 cut(s) 216
SinI GGWCC 2 cut(s) 175, 860
SlaI CTCGAG 1 cut(s) 216
SmlI CTYRAG 1 cut(s) 216
SmoI CTYRAG 1 cut(s) 216
Sse9I AATT 4 cut(s) 86, 100, 554, 713
SseBI AGGCCT 1 cut(s) 784
SsiI CCGC 6 cut(s) 137, 301, 447, 588, 616, 828
SspMI CTAG 5 cut(s) 14, 323, 375, 621, 668
StuI AGGCCT 1 cut(s) 784
StyD4I CCNGG 4 cut(s) 8, 177, 568, 862
StyI CCWWGG 4 cut(s) 374, 620, 759, 840
TaaI ACNGT 3 cut(s) 403, 665, 688
TaiI ACGT 3 cut(s) 291, 752, 821
TaqI TCGA 3 cut(s) 217, 389, 494
TasI AATT 4 cut(s) 86, 100, 554, 713
TauI GCSGC 1 cut(s) 618
TfiI GAWTC 1 cut(s) 352
Tru1I TTAA 1 cut(s) 807
Tru9I TTAA 1 cut(s) 807
TscAI CASTG 3 cut(s) 255, 668, 691
TseFI GTSAC 3 cut(s) 745, 750, 814
TseI GCWGC 3 cut(s) 364, 421, 691
Tsp45I GTSAC 3 cut(s) 745, 750, 814
TspGWI ACGGA 3 cut(s) 299, 530, 653
TspRI CASTG 3 cut(s) 255, 668, 691
VpaK11BI GGWCC 2 cut(s) 175, 860
XapI RAATTY 2 cut(s) 86, 713
XcmI CCANNNNNNNNNTGG 1 cut(s) 457
XhoI CTCGAG 1 cut(s) 216
XmaJI CCTAGG 2 cut(s) 374, 620
XspI CTAG 5 cut(s) 14, 323, 375, 621, 668
ZraI GACGTC 3 cut(s) 289, 750, 819
Zsp2I ATGCAT 1 cut(s) 876
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.