Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_ssc0000333.1

Orthogroup ID

OG0000172

Physical Location & Seq

Genomic Coordinates Forward (+)

16895 .. 18106

Gene Structure 1212 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_ssc0000333.1_g000005.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1080 bp

ctgcggctattgcttcagacggtcaggctagcgaccaaattgtcgctcagagagggtgaggaaccggtggacttgggaaaccttagggttatagggagggagtttcttgctcgtcgcttctacttggtagggaaactcaacactcttagggcagtggttttggattcattccggagtgcggtgcggtcaatgtggcgactgatggggaccgtggaggtccaaccatggggtgataggtttctgttcacgttcacttatgaacgtgatgttgcgcgggtgaagagtggtggcccgtggggatttcaacgtgctatgattctgctgaatgattacgatggcttctcagagattgctgaggtgaagcttgattttgtttggatctgggttgtgcttcacggtcttccacagggtatcttgatggaacccactgtccggctagtgggaggaacgatcggaaaggttttggaggtggatcgtttggctcttcggcatggtgttgcttgggtcttgattactctggccatcaatgacctagatgagtcggagaccgacactgtggtagaggagggttcgcaacaggtaccggggctagctctcccagccctcgtgtttagggctaatacccagccttttccttccttgcttttgaccttcaaggttcctaatttactaaagaagaaacaagtgcagattcgatctcttccgaagttggaatgttcgcctaggactgaaggcacttctattcctatcccaatggtaaggatgcgccgtcctagggaggaggaggacgcggatgacggtaaaagagctaaacatagtttagctctgggtccagccactctgcaactggaaaacctaggtctggaattctcttatgaaggtttggtggaggtgaaggtgacgtcgcctcccaaggtttacaagaagaagagcaggcctcgaggacatagaaacaaggttaagttggaggtgtctgtgtgtggtggctctaggtccatggtatcctttaaggatggtcctggcagtgtgcatggtaggattgagggagcggcaactttgcttgcttcccaggccgattag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005576 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005773 GO:0005829 GO:0005886 GO:0005911 GO:0006950 GO:0006952 GO:0006979 GO:0008150 GO:0008152 GO:0009505 GO:0009506 GO:0009605 GO:0009607 GO:0009620 GO:0016020 GO:0016491 GO:0016614 GO:0016899 GO:0030054 GO:0030312 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0048046 GO:0050832 GO:0050896 GO:0051704 GO:0051707 GO:0055044 GO:0055114 GO:0071944 GO:0098542

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BBE FAD_binding_4

Protein Analysis

359

Amino Acids

40.07

Weight (kDa)

9.61

Isoelectric Point (pI)

40.76

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000172)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G59650 AT3G59650
fragaria_vesca	FvH4_1g19981 FvH4_1g22221 FvH4_2g13530 FvH4_2g13791 FvH4_2g14332 FvH4_2g14911 FvH4_2g16332 FvH4_3g10980 FvH4_3g11141 FvH4_3g14171 FvH4_3g26311 FvH4_3g28254 FvH4_3g29741 FvH4_4g05261 FvH4_4g12002 FvH4_4g13371 FvH4_4g15541 FvH4_4g18531 FvH4_5g02661 FvH4_5g02662 FvH4_5g16791 FvH4_5g29700 FvH4_5g35881 FvH4_5g37061 FvH4_6g01571 FvH4_6g12761 FvH4_6g14961 FvH4_6g20381 FvH4_6g22001 FvH4_6g23673 FvH4_6g23960 FvH4_6g28051 FvH4_6g31094 FvH4_6g36541 FvH4_7g00911 FvH4_7g06200 FvH4_7g06200 FvH4_7g09551
malus_domestica	MD08G1230600.v1.1
prunus_persica	Prupe.1G206900_v2.0.a1 Prupe.1G206900_v2.0.a1 Prupe.1G206900_v2.0.a1
pyrus_communis	pycom08g20050 pycom15g37590
rosa_chinensis	RchiOBHm_Chr1g0333831 RchiOBHm_Chr1g0344871 RchiOBHm_Chr3g0473241 RchiOBHm_Chr5g0018871 RchiOBHm_Chr6g0265791
rosa_laevigata	RLG00000005720 RLG00000012718 RLG00000027174 RLG00000029225 RLG00000029527
rosa_multiflora	Rmu_co8002714.1_g000001 Rmu_co8072270.1_g000001 Rmu_co8095594.1_g000001 Rmu_co8308871.1_g000001 Rmu_co8398699.1_g000001 Rmu_co8404287.1_g000001 Rmu_sc0000035.1_g000010 Rmu_sc0000133.1_g000007 Rmu_sc0000253.1_g000023 Rmu_sc0000308.1_g000010 Rmu_sc0000309.1_g000030 Rmu_sc0000515.1_g000015 Rmu_sc0000865.1_g000001 Rmu_sc0000889.1_g000005 Rmu_sc0001262.1_g000011 Rmu_sc0001518.1_g000013 Rmu_sc0001533.1_g000006 Rmu_sc0001547.1_g000007 Rmu_sc0001826.1_g000013 Rmu_sc0002060.1_g000017 Rmu_sc0002129.1_g000005 Rmu_sc0002449.1_g000016 Rmu_sc0002460.1_g000036 Rmu_sc0002475.1_g000014 Rmu_sc0002553.1_g000017 Rmu_sc0002759.1_g000033 Rmu_sc0002918.1_g000009 Rmu_sc0002955.1_g000020 Rmu_sc0003094.1_g000010 Rmu_sc0003669.1_g000009 Rmu_sc0004109.1_g000008 Rmu_sc0004350.1_g000007 Rmu_sc0004542.1_g000018 Rmu_sc0004967.1_g000005 Rmu_sc0005026.1_g000005 Rmu_sc0005369.1_g000013 Rmu_sc0005400.1_g000025 Rmu_sc0005420.1_g000006 Rmu_sc0005467.1_g000013 Rmu_sc0005497.1_g000003 Rmu_sc0005607.1_g000023 Rmu_sc0005949.1_g000008 Rmu_sc0005970.1_g000002 Rmu_sc0006452.1_g000001 Rmu_sc0006720.1_g000008 Rmu_sc0006867.1_g000004 Rmu_sc0007177.1_g000006 Rmu_sc0007199.1_g000011 Rmu_sc0007783.1_g000004 Rmu_sc0007885.1_g000006 Rmu_sc0008619.1_g000001 Rmu_sc0008709.1_g000004 Rmu_sc0008709.1_g000005 Rmu_sc0009185.1_g000029 Rmu_sc0010244.1_g000010 Rmu_sc0011610.1_g000005 Rmu_sc0011680.1_g000013 Rmu_sc0012075.1_g000003 Rmu_sc0012278.1_g000001 Rmu_sc0012628.1_g000001 Rmu_sc0018485.1_g000006 Rmu_sc0019960.1_g000001 Rmu_sc0020177.1_g000002 Rmu_sc0020656.1_g000001 Rmu_sc0021333.1_g000003 Rmu_sc0023170.1_g000002 Rmu_sc0023989.1_g000005 Rmu_sc0025259.1_g000001 Rmu_sc0025350.1_g000013 Rmu_sc0029678.1_g000002 Rmu_sc0035939.1_g000001 Rmu_sc0039260.1_g000001 Rmu_sc0039886.1_g000001 Rmu_ssc0000323.1_g000030 Rmu_ssc0000333.1_g000005 Rmu_ssc0000471.1_g000017 Rmu_ssc0000480.1_g000025
rosa_roxburghii	Rroxscaffold_1G00006060 Rroxscaffold_1G00048570 Rroxscaffold_1G00057650 Rroxscaffold_1G00072720 Rroxscaffold_4G00281190 Rroxscaffold_4G00317160 Rroxscaffold_6G00411570
rosa_rugosa	Rorug01G0004800 Rorug01G0112100 Rorug01G0206100 Rorug02G0324000 Rorug05G0305600 Rorug05G0326800 Rorug06G0018900 Rorug06G0167000 Rorug07G0031200 Rorug07G0071900
rosa_samantha	Rh1AG134700 Rh1BG103000 Rh1CG007300 Rh1CG128100 Rh1DG140100 Rh2DG579500 Rh3DG199000 Rh4BG252500 Rh5AG374900 Rh5BG146800 Rh5BG151500 Rh5DG399700
rosa_wichuraiana	Rw0G001820 Rw1G011230 Rw1G011240 Rw1G027290 Rw2G011670 Rw2G039270 Rw6G018440 Rw6G023120 Rw7G025180

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	40
AatII	GACGTC	1 cut(s)	905
AbsI	CCTCGAGG	1 cut(s)	939
Acc65I	GGTACC	1 cut(s)	580
AccB1I	GGYRCC	1 cut(s)	580
AccBSI	CCGCTC	1 cut(s)	1049
AccII	CGCG	2 cut(s)	274, 791
AccIII	TCCGGA	1 cut(s)	171
AciI	CCGC	6 cut(s)	4, 179, 184, 274, 791, 1049
AclWI	GGATC	2 cut(s)	386, 480
AcoI	YGGCCR	1 cut(s)	519
AcsI	RAATTY	1 cut(s)	866
AcuI	CTGAAG	1 cut(s)	750
AcyI	GRCGYC	1 cut(s)	902
AfaI	GTAC	1 cut(s)	582
AfiI	CCNNNNNNNGG	6 cut(s)	178, 226, 432, 439, 775, 862
AgeI	ACCGGT	1 cut(s)	64
AgsI	TTSAA	2 cut(s)	305, 655
AjnI	CCWGG	2 cut(s)	1018, 1068
AloI	GAACNNNNNNTCC	2 cut(s)	414, 446
AluBI	AGCT	4 cut(s)	364, 593, 809, 824
AluI	AGCT	4 cut(s)	364, 593, 809, 824
Alw26I	GTCTC	1 cut(s)	539
AlwI	GGATC	2 cut(s)	386, 480
Ama87I	CYCGRG	1 cut(s)	939
Aor13HI	TCCGGA	1 cut(s)	171
AoxI	GGCC	4 cut(s)	289, 519, 935, 1071
ApoI	RAATTY	1 cut(s)	866
AsiGI	ACCGGT	1 cut(s)	64
Asp718I	GGTACC	1 cut(s)	580
AspA2I	CCTAGG	3 cut(s)	722, 773, 856
AspLEI	GCGC	2 cut(s)	274, 768
AspS9I	GGNCC	6 cut(s)	207, 217, 290, 830, 993, 1016
AsuC2I	CCSGG	1 cut(s)	585
AsuHPI	GGTGA	6 cut(s)	68, 242, 289, 370, 904, 910
AsuNHI	GCTAGC	2 cut(s)	28, 589
AvaI	CYCGRG	1 cut(s)	939
AvaII	GGWCC	5 cut(s)	207, 217, 830, 993, 1016
AvrII	CCTAGG	3 cut(s)	722, 773, 856
AxyI	CCTNAGG	1 cut(s)	83
BalI	TGGCCA	1 cut(s)	521
BanI	GGYRCC	1 cut(s)	580
BauI	CACGAG	1 cut(s)	605
BbsI	GAAGAC	1 cut(s)	392
BbvCI	CCTCAGC	1 cut(s)	354
BccI	CCATC	5 cut(s)	196, 329, 412, 530, 1007
BceAI	ACGGC	1 cut(s)	753
BciT130I	CCWGG	2 cut(s)	1020, 1070
BciVI	GTATCC	1 cut(s)	1012
BcnI	CCSGG	1 cut(s)	585
BcoDI	GTCTC	1 cut(s)	539
BfaI	CTAG	8 cut(s)	29, 437, 533, 590, 723, 774, 857, 990
BfuI	GTATCC	1 cut(s)	1012
BisI	GCNGC	2 cut(s)	5, 1050
BlnI	CCTAGG	3 cut(s)	722, 773, 856
BlsI	GCNGC	2 cut(s)	6, 1051
Bme1390I	CCNGG	3 cut(s)	585, 1020, 1070
Bme18I	GGWCC	5 cut(s)	207, 217, 830, 993, 1016
BmeT110I	CYCGRG	1 cut(s)	939
BmgT120I	GGNCC	6 cut(s)	207, 217, 290, 830, 993, 1016
BmiI	GGNNCC	6 cut(s)	63, 208, 423, 582, 660, 831
BmrFI	CCNGG	3 cut(s)	585, 1020, 1070
BmsI	GCATC	1 cut(s)	753
BmtI	GCTAGC	2 cut(s)	32, 593
BpiI	GAAGAC	1 cut(s)	392
BplI	GAGNNNNNCTC	2 cut(s)	922, 954
Bpu10I	CCTNAGC	1 cut(s)	354
BpuMI	CCSGG	1 cut(s)	585
BsaHI	GRCGYC	1 cut(s)	902
BsaI	GGTCTC	1 cut(s)	539
BsaWI	WCCGGW	2 cut(s)	64, 171
BsaXI	ACNNNNNCTCC	2 cut(s)	892, 922
Bsc4I	CCNNNNNNNGG	6 cut(s)	178, 226, 432, 439, 775, 862
Bse118I	RCCGGY	1 cut(s)	64
Bse1I	ACTGG	1 cut(s)	852
Bse21I	CCTNAGG	1 cut(s)	83
BseAI	TCCGGA	1 cut(s)	171
BseBI	CCWGG	2 cut(s)	1020, 1070
BseGI	GGATG	3 cut(s)	768, 799, 1018
BseLI	CCNNNNNNNGG	6 cut(s)	178, 226, 432, 439, 775, 862
BseMII	CTCAG	3 cut(s)	61, 345, 357
BseNI	ACTGG	1 cut(s)	852
BseRI	GAGGAG	3 cut(s)	578, 794, 797
BseYI	CCCAGC	2 cut(s)	598, 624
BsgI	GTGCAG	1 cut(s)	707
Bsh1236I	CGCG	2 cut(s)	274, 791
Bsh1285I	CGRYCG	1 cut(s)	453
BshFI	GGCC	4 cut(s)	291, 521, 937, 1073
BshNI	GGYRCC	1 cut(s)	580
BshTI	ACCGGT	1 cut(s)	64
BsiEI	CGRYCG	1 cut(s)	453
BsiHKCI	CYCGRG	1 cut(s)	939
BsiSI	CCGG	4 cut(s)	65, 172, 433, 584
BslFI	GGGAC	1 cut(s)	220
BslI	CCNNNNNNNGG	6 cut(s)	178, 226, 432, 439, 775, 862
BsmAI	GTCTC	1 cut(s)	539
BsmFI	GGGAC	1 cut(s)	220
BsnI	GGCC	4 cut(s)	291, 521, 937, 1073
Bso31I	GGTCTC	1 cut(s)	539
BsoBI	CYCGRG	1 cut(s)	939
Bsp13I	TCCGGA	1 cut(s)	171
Bsp143I	GATC	4 cut(s)	378, 450, 472, 695
Bsp19I	CCATGG	2 cut(s)	224, 996
BspACI	CCGC	6 cut(s)	4, 179, 184, 274, 791, 1049
BspANI	GGCC	4 cut(s)	291, 521, 937, 1073
BspCNI	CTCAG	3 cut(s)	60, 346, 356
BspEI	TCCGGA	1 cut(s)	171
BspFNI	CGCG	2 cut(s)	274, 791
BspLI	GGNNCC	6 cut(s)	63, 208, 423, 582, 660, 831
BspOI	GCTAGC	2 cut(s)	32, 593
BspPI	GGATC	2 cut(s)	386, 480
BspQI	GCTCTTC	2 cut(s)	489, 923
BspT107I	GGYRCC	1 cut(s)	580
BspTNI	GGTCTC	1 cut(s)	539
BsrBI	CCGCTC	1 cut(s)	1049
BsrFI	RCCGGY	1 cut(s)	64
BsrI	ACTGG	1 cut(s)	852
BssAI	RCCGGY	1 cut(s)	64
BssMI	GATC	4 cut(s)	378, 450, 472, 695
BssNI	GRCGYC	1 cut(s)	902
BssSI	CACGAG	1 cut(s)	605
BssT1I	CCWWGG	6 cut(s)	224, 722, 773, 856, 912, 996
Bst2BI	CACGAG	1 cut(s)	605
Bst2UI	CCWGG	2 cut(s)	1020, 1070
Bst4CI	ACNGT	6 cut(s)	22, 211, 398, 430, 556, 800
Bst6I	CTCTTC	4 cut(s)	275, 489, 705, 923
BstACI	GRCGYC	1 cut(s)	902
BstC8I	GCNNGC	4 cut(s)	30, 591, 935, 1062
BstDEI	CTNAG	5 cut(s)	47, 83, 146, 343, 354
BstDSI	CCRYGG	4 cut(s)	210, 224, 293, 996
BstF5I	GGATG	3 cut(s)	768, 799, 1018
BstFNI	CGCG	2 cut(s)	274, 791
BstHHI	GCGC	2 cut(s)	274, 768
BstKTI	GATC	4 cut(s)	381, 453, 475, 698
BstMAI	GTCTC	1 cut(s)	539
BstMBI	GATC	4 cut(s)	378, 450, 472, 695
BstMCI	CGRYCG	1 cut(s)	453
BstMWI	GCNNNNNNNGC	3 cut(s)	10, 599, 1070
BstNI	CCWGG	2 cut(s)	1020, 1070
BstSCI	CCNGG	3 cut(s)	583, 1018, 1068
BstUI	CGCG	2 cut(s)	274, 791
BstV2I	GAAGAC	1 cut(s)	392
BstX2I	RGATCY	1 cut(s)	378
BstYI	RGATCY	1 cut(s)	378
Bsu36I	CCTNAGG	1 cut(s)	83
BsuI	GTATCC	1 cut(s)	1012
BsuRI	GGCC	4 cut(s)	291, 521, 937, 1073
BtgI	CCRYGG	4 cut(s)	210, 224, 293, 996
BtsCI	GGATG	3 cut(s)	768, 799, 1018
BtsI	GCAGTG	2 cut(s)	159, 1030
BtsIMutI	CAGTG	4 cut(s)	159, 426, 552, 1030
Cac8I	GCNNGC	4 cut(s)	30, 591, 935, 1062
CfoI	GCGC	2 cut(s)	274, 768
Cfr10I	RCCGGY	1 cut(s)	64
Cfr13I	GGNCC	6 cut(s)	207, 217, 290, 830, 993, 1016
CseI	GACGC	1 cut(s)	797
Csp6I	GTAC	1 cut(s)	581
CspAI	ACCGGT	1 cut(s)	64
CviAII	CATG	4 cut(s)	225, 491, 997, 1031
CviQI	GTAC	1 cut(s)	581
DdeI	CTNAG	5 cut(s)	47, 83, 146, 343, 354
DpnI	GATC	4 cut(s)	380, 452, 474, 697
DpnII	GATC	4 cut(s)	378, 450, 472, 695
DrdI	GACNNNNNNGTC	1 cut(s)	40
DseDI	GACNNNNNNGTC	1 cut(s)	40
EaeI	YGGCCR	1 cut(s)	519
Eam1104I	CTCTTC	4 cut(s)	275, 489, 705, 923
EarI	CTCTTC	4 cut(s)	275, 489, 705, 923
Eco130I	CCWWGG	6 cut(s)	224, 722, 773, 856, 912, 996
Eco147I	AGGCCT	1 cut(s)	937
Eco31I	GGTCTC	1 cut(s)	539
Eco47I	GGWCC	5 cut(s)	207, 217, 830, 993, 1016
Eco57I	CTGAAG	1 cut(s)	750
Eco81I	CCTNAGG	1 cut(s)	83
Eco88I	CYCGRG	1 cut(s)	939
EcoRI	GAATTC	1 cut(s)	866
EcoRII	CCWGG	2 cut(s)	1018, 1068
EcoT14I	CCWWGG	6 cut(s)	224, 722, 773, 856, 912, 996
ErhI	CCWWGG	6 cut(s)	224, 722, 773, 856, 912, 996
FaeI	CATG	4 cut(s)	228, 494, 1000, 1034
FaqI	GGGAC	1 cut(s)	220
FatI	CATG	4 cut(s)	224, 490, 996, 1030
FauI	CCCGC	1 cut(s)	267
Fnu4HI	GCNGC	2 cut(s)	5, 1050
FokI	GGATG	3 cut(s)	775, 806, 1025
Fsp4HI	GCNGC	2 cut(s)	5, 1050
FspBI	CTAG	8 cut(s)	29, 437, 533, 590, 723, 774, 857, 990
GlaI	GCGC	2 cut(s)	273, 767
GluI	GCNGC	2 cut(s)	5, 1050
GsaI	CCCAGC	2 cut(s)	602, 628
HaeIII	GGCC	4 cut(s)	291, 521, 937, 1073
HapII	CCGG	4 cut(s)	65, 172, 433, 584
HgaI	GACGC	1 cut(s)	797
HhaI	GCGC	2 cut(s)	274, 768
Hin1I	GRCGYC	1 cut(s)	902
Hin1II	CATG	4 cut(s)	228, 494, 1000, 1034
Hin6I	GCGC	2 cut(s)	272, 766
HinP1I	GCGC	2 cut(s)	272, 766
HindIII	AAGCTT	1 cut(s)	362
HinfI	GANTC	4 cut(s)	164, 316, 539, 691
HpaII	CCGG	4 cut(s)	65, 172, 433, 584
HphI	GGTGA	6 cut(s)	68, 242, 289, 370, 904, 910
Hpy166II	GTNNAC	4 cut(s)	70, 246, 252, 919
Hpy188I	TCNGA	6 cut(s)	18, 50, 346, 455, 544, 705
Hpy188III	TCNNGA	4 cut(s)	172, 415, 508, 863
Hpy8I	GTNNAC	4 cut(s)	70, 246, 252, 919
Hpy99I	CGWCG	2 cut(s)	117, 907
HpyAV	CCTTC	5 cut(s)	645, 661, 725, 872, 889
HpyCH4III	ACNGT	6 cut(s)	22, 211, 398, 430, 556, 800
HpyCH4IV	ACGT	4 cut(s)	248, 262, 307, 902
HpyCH4V	TGCA	3 cut(s)	688, 844, 1030
HpyF10VI	GCNNNNNNNGC	3 cut(s)	10, 599, 1070
HpyF3I	CTNAG	5 cut(s)	47, 83, 146, 343, 354
HpySE526I	ACGT	4 cut(s)	248, 262, 307, 902
Hsp92I	GRCGYC	1 cut(s)	902
Hsp92II	CATG	4 cut(s)	228, 494, 1000, 1034
HspAI	GCGC	2 cut(s)	272, 766
Kpn2I	TCCGGA	1 cut(s)	171
KpnI	GGTACC	1 cut(s)	584
Kzo9I	GATC	4 cut(s)	378, 450, 472, 695
LguI	GCTCTTC	2 cut(s)	489, 923
LmnI	GCTCC	1 cut(s)	1046
LweI	GCATC	1 cut(s)	753
MaeI	CTAG	8 cut(s)	29, 437, 533, 590, 723, 774, 857, 990
MaeII	ACGT	4 cut(s)	248, 262, 307, 902
MaeIII	GTNAC	1 cut(s)	898
MalI	GATC	4 cut(s)	380, 452, 474, 697
MbiI	CCGCTC	1 cut(s)	1049
MboI	GATC	4 cut(s)	378, 450, 472, 695
MboII	GAAGA	7 cut(s)	292, 392, 476, 688, 692, 937, 940
MflI	RGATCY	1 cut(s)	378
MlsI	TGGCCA	1 cut(s)	521
MluCI	AATT	3 cut(s)	38, 664, 866
MluNI	TGGCCA	1 cut(s)	521
MlyI	GAGTC	1 cut(s)	548
MmeI	TCCRAC	4 cut(s)	244, 522, 690, 945
Mox20I	TGGCCA	1 cut(s)	521
MroI	TCCGGA	1 cut(s)	171
MscI	TGGCCA	1 cut(s)	521
MseI	TTAA	2 cut(s)	960, 1008
Msp20I	TGGCCA	1 cut(s)	521
MspI	CCGG	4 cut(s)	65, 172, 433, 584
MspR9I	CCNGG	3 cut(s)	585, 1020, 1070
MvaI	CCWGG	2 cut(s)	1020, 1070
MvnI	CGCG	2 cut(s)	274, 791
MwoI	GCNNNNNNNGC	3 cut(s)	10, 599, 1070
NciI	CCSGG	1 cut(s)	585
NcoI	CCATGG	2 cut(s)	224, 996
NdeII	GATC	4 cut(s)	378, 450, 472, 695
NheI	GCTAGC	2 cut(s)	28, 589
NlaIII	CATG	4 cut(s)	228, 494, 1000, 1034
NlaIV	GGNNCC	6 cut(s)	63, 208, 423, 582, 660, 831
NmuCI	GTSAC	1 cut(s)	898
PaeR7I	CTCGAG	1 cut(s)	939
PceI	AGGCCT	1 cut(s)	937
PciSI	GCTCTTC	2 cut(s)	489, 923
PfeI	GAWTC	3 cut(s)	164, 316, 691
PinAI	ACCGGT	1 cut(s)	64
PkrI	GCNGC	2 cut(s)	6, 1051
Ple19I	CGATCG	1 cut(s)	453
PleI	GAGTC	1 cut(s)	547
PpsI	GAGTC	1 cut(s)	547
Psp6I	CCWGG	2 cut(s)	1018, 1068
PspFI	CCCAGC	2 cut(s)	598, 624
PspGI	CCWGG	2 cut(s)	1018, 1068
PspN4I	GGNNCC	6 cut(s)	63, 208, 423, 582, 660, 831
PspPI	GGNCC	6 cut(s)	207, 217, 290, 830, 993, 1016
PspXI	VCTCGAGB	1 cut(s)	939
PsuI	RGATCY	1 cut(s)	378
PvuI	CGATCG	1 cut(s)	453
RsaI	GTAC	1 cut(s)	582
RsaNI	GTAC	1 cut(s)	581
SapI	GCTCTTC	2 cut(s)	489, 923
SaqAI	TTAA	2 cut(s)	960, 1008
SatI	GCNGC	2 cut(s)	5, 1050
Sau3AI	GATC	4 cut(s)	378, 450, 472, 695
Sau96I	GGNCC	6 cut(s)	207, 217, 290, 830, 993, 1016
SchI	GAGTC	1 cut(s)	548
ScrFI	CCNGG	3 cut(s)	585, 1020, 1070
SfaNI	GCATC	1 cut(s)	753
Sfr274I	CTCGAG	1 cut(s)	939
SinI	GGWCC	5 cut(s)	207, 217, 830, 993, 1016
SlaI	CTCGAG	1 cut(s)	939
SmlI	CTYRAG	1 cut(s)	939
SmoI	CTYRAG	1 cut(s)	939
Sse9I	AATT	3 cut(s)	38, 664, 866
SseBI	AGGCCT	1 cut(s)	937
SsiI	CCGC	6 cut(s)	4, 179, 184, 274, 791, 1049
SspMI	CTAG	8 cut(s)	29, 437, 533, 590, 723, 774, 857, 990
StuI	AGGCCT	1 cut(s)	937
StyD4I	CCNGG	3 cut(s)	583, 1018, 1068
StyI	CCWWGG	6 cut(s)	224, 722, 773, 856, 912, 996
TaaI	ACNGT	6 cut(s)	22, 211, 398, 430, 556, 800
TaiI	ACGT	4 cut(s)	251, 265, 310, 905
TaqI	TCGA	2 cut(s)	694, 940
TaqII	GACCGA	1 cut(s)	563
TasI	AATT	3 cut(s)	38, 664, 866
TauI	GCSGC	2 cut(s)	7, 1052
TfiI	GAWTC	3 cut(s)	164, 316, 691
Tru1I	TTAA	2 cut(s)	960, 1008
Tru9I	TTAA	2 cut(s)	960, 1008
TscAI	CASTG	4 cut(s)	159, 433, 559, 1030
TseFI	GTSAC	1 cut(s)	898
Tsp45I	GTSAC	1 cut(s)	898
TspDTI	ATGAA	3 cut(s)	156, 273, 891
TspRI	CASTG	4 cut(s)	159, 433, 559, 1030
VpaK11BI	GGWCC	5 cut(s)	207, 217, 830, 993, 1016
XapI	RAATTY	1 cut(s)	866
XcmI	CCANNNNNNNNNTGG	1 cut(s)	844
XhoI	CTCGAG	1 cut(s)	939
XmaJI	CCTAGG	3 cut(s)	722, 773, 856
XspI	CTAG	8 cut(s)	29, 437, 533, 590, 723, 774, 857, 990
ZraI	GACGTC	1 cut(s)	903

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.