Rmu_sc0001826.1_g000013

Ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001826.1
OG0000172
Physical Location & Seq
Reverse (-)
51972 .. 53007
1036 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001826.1_g000013.1.cds

Sequence Viewer

Length: 693 bp
atgtggaggttgtctgggaccgtggaggtccaaccacggggtgaacgtttccttttcacattcactcatgagagggatgtctctcgtgtaaagaaaggtgggtcgtggggttttcagcgagctatgatcctcttgaatgattatgatggcttctcgaacatgtctgccgtgaagctagactttgtttggatctgggttacgctgcagggtattcctccgagcatgttgatggaacctactgtccagttggttggtgggacaatcaaagaggtcctggaggtggacgtacggcgctacgcaggggagaagctcgagctcctagggcactgttgctcctatgctatgctgaatcatggcaaccagagatgccttagggaggaagaatcggagactaacaccatggctgaggcggggtcacagccggcggcaccggtggtgggggtgtgtcgtcccagggaagaggatgatcatgaggatggtaagcgtgccaaacacagtttggctcttgttccggtttacaagaagaagggcaaacctcgtggtcaaaggaacaaagcaaaaggttcaccggtggcgtccacctgtggcggctctgagtccatggtgtcggggtcccttgatggagggtttgttggtgtgcatggggtgcatgatgggctgacatctttggagaccgtctcccattccgggtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00230 ko00670 ko01100 ko01110 ko01130 ko01523 map00230 map00670 map01100 map01110 map01130 map01523
Pfam Domains
Protein Families
DDE_Tnp_1_7 DUF4283 RVT_1 RVT_3 zf-CCHC_4 zf-RVT

Protein Analysis

230

Amino Acids

25.19

Weight (kDa)

7.09

Isoelectric Point (pI)

36.79

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000172)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G59650 AT3G59650
fragaria_vesca FvH4_1g19981 FvH4_1g22221 FvH4_2g13530 FvH4_2g13791 FvH4_2g14332 FvH4_2g14911 FvH4_2g16332 FvH4_3g10980 FvH4_3g11141 FvH4_3g14171 FvH4_3g26311 FvH4_3g28254 FvH4_3g29741 FvH4_4g05261 FvH4_4g12002 FvH4_4g13371 FvH4_4g15541 FvH4_4g18531 FvH4_5g02661 FvH4_5g02662 FvH4_5g16791 FvH4_5g29700 FvH4_5g35881 FvH4_5g37061 FvH4_6g01571 FvH4_6g12761 FvH4_6g14961 FvH4_6g20381 FvH4_6g22001 FvH4_6g23673 FvH4_6g23960 FvH4_6g28051 FvH4_6g31094 FvH4_6g36541 FvH4_7g00911 FvH4_7g06200 FvH4_7g06200 FvH4_7g09551
malus_domestica MD08G1230600.v1.1
prunus_persica Prupe.1G206900_v2.0.a1 Prupe.1G206900_v2.0.a1 Prupe.1G206900_v2.0.a1
pyrus_communis pycom08g20050 pycom15g37590
rosa_chinensis RchiOBHm_Chr1g0333831 RchiOBHm_Chr1g0344871 RchiOBHm_Chr3g0473241 RchiOBHm_Chr5g0018871 RchiOBHm_Chr6g0265791
rosa_laevigata RLG00000005720 RLG00000012718 RLG00000027174 RLG00000029225 RLG00000029527
rosa_multiflora Rmu_co8002714.1_g000001 Rmu_co8072270.1_g000001 Rmu_co8095594.1_g000001 Rmu_co8308871.1_g000001 Rmu_co8398699.1_g000001 Rmu_co8404287.1_g000001 Rmu_sc0000035.1_g000010 Rmu_sc0000133.1_g000007 Rmu_sc0000253.1_g000023 Rmu_sc0000308.1_g000010 Rmu_sc0000309.1_g000030 Rmu_sc0000515.1_g000015 Rmu_sc0000865.1_g000001 Rmu_sc0000889.1_g000005 Rmu_sc0001262.1_g000011 Rmu_sc0001518.1_g000013 Rmu_sc0001533.1_g000006 Rmu_sc0001547.1_g000007 Rmu_sc0001826.1_g000013 Rmu_sc0002060.1_g000017 Rmu_sc0002129.1_g000005 Rmu_sc0002449.1_g000016 Rmu_sc0002460.1_g000036 Rmu_sc0002475.1_g000014 Rmu_sc0002553.1_g000017 Rmu_sc0002759.1_g000033 Rmu_sc0002918.1_g000009 Rmu_sc0002955.1_g000020 Rmu_sc0003094.1_g000010 Rmu_sc0003669.1_g000009 Rmu_sc0004109.1_g000008 Rmu_sc0004350.1_g000007 Rmu_sc0004542.1_g000018 Rmu_sc0004967.1_g000005 Rmu_sc0005026.1_g000005 Rmu_sc0005369.1_g000013 Rmu_sc0005400.1_g000025 Rmu_sc0005420.1_g000006 Rmu_sc0005467.1_g000013 Rmu_sc0005497.1_g000003 Rmu_sc0005607.1_g000023 Rmu_sc0005949.1_g000008 Rmu_sc0005970.1_g000002 Rmu_sc0006452.1_g000001 Rmu_sc0006720.1_g000008 Rmu_sc0006867.1_g000004 Rmu_sc0007177.1_g000006 Rmu_sc0007199.1_g000011 Rmu_sc0007783.1_g000004 Rmu_sc0007885.1_g000006 Rmu_sc0008619.1_g000001 Rmu_sc0008709.1_g000004 Rmu_sc0008709.1_g000005 Rmu_sc0009185.1_g000029 Rmu_sc0010244.1_g000010 Rmu_sc0011610.1_g000005 Rmu_sc0011680.1_g000013 Rmu_sc0012075.1_g000003 Rmu_sc0012278.1_g000001 Rmu_sc0012628.1_g000001 Rmu_sc0018485.1_g000006 Rmu_sc0019960.1_g000001 Rmu_sc0020177.1_g000002 Rmu_sc0020656.1_g000001 Rmu_sc0021333.1_g000003 Rmu_sc0023170.1_g000002 Rmu_sc0023989.1_g000005 Rmu_sc0025259.1_g000001 Rmu_sc0025350.1_g000013 Rmu_sc0029678.1_g000002 Rmu_sc0035939.1_g000001 Rmu_sc0039260.1_g000001 Rmu_sc0039886.1_g000001 Rmu_ssc0000323.1_g000030 Rmu_ssc0000333.1_g000005 Rmu_ssc0000471.1_g000017 Rmu_ssc0000480.1_g000025
rosa_roxburghii Rroxscaffold_1G00006060 Rroxscaffold_1G00048570 Rroxscaffold_1G00057650 Rroxscaffold_1G00072720 Rroxscaffold_4G00281190 Rroxscaffold_4G00317160 Rroxscaffold_6G00411570
rosa_rugosa Rorug01G0004800 Rorug01G0112100 Rorug01G0206100 Rorug02G0324000 Rorug05G0305600 Rorug05G0326800 Rorug06G0018900 Rorug06G0167000 Rorug07G0031200 Rorug07G0071900
rosa_samantha Rh1AG134700 Rh1BG103000 Rh1CG007300 Rh1CG128100 Rh1DG140100 Rh2DG579500 Rh3DG199000 Rh4BG252500 Rh5AG374900 Rh5BG146800 Rh5BG151500 Rh5DG399700
rosa_wichuraiana Rw0G001820 Rw1G011230 Rw1G011240 Rw1G027290 Rw2G011670 Rw2G039270 Rw6G018440 Rw6G023120 Rw7G025180

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 427
AciI CCGC 3 cut(s) 410, 425, 588
AclI AACGTT 1 cut(s) 46
AclWI GGATC 2 cut(s) 121, 197
AcyI GRCGYC 1 cut(s) 575
AdeI CACNNNGTG 1 cut(s) 41
AfaI GTAC 1 cut(s) 288
AfiI CCNNNNNNNGG 5 cut(s) 37, 280, 376, 437, 687
AflIII ACRYGT 1 cut(s) 159
AgeI ACCGGT 2 cut(s) 430, 568
AgsI TTSAA 1 cut(s) 136
AjnI CCWGG 2 cut(s) 273, 452
AloI GAACNNNNNNTCC 2 cut(s) 225, 257
AluBI AGCT 4 cut(s) 122, 175, 310, 316
AluI AGCT 4 cut(s) 122, 175, 310, 316
Alw21I GWGCWC 1 cut(s) 318
Alw26I GTCTC 4 cut(s) 85, 383, 665, 682
AlwI GGATC 2 cut(s) 121, 197
Ama87I CYCGRG 1 cut(s) 311
ApeKI GCWGC 1 cut(s) 202
AsiGI ACCGGT 2 cut(s) 430, 568
AspA2I CCTAGG 1 cut(s) 319
AspLEI GCGC 1 cut(s) 294
AspS9I GGNCC 4 cut(s) 18, 28, 271, 612
AsuC2I CCSGG 1 cut(s) 688
AsuHPI GGTGA 2 cut(s) 53, 558
AvaI CYCGRG 1 cut(s) 311
AvaII GGWCC 4 cut(s) 18, 28, 271, 612
AvrII CCTAGG 1 cut(s) 319
AxyI CCTNAGG 1 cut(s) 371
BaeGI GKGCMC 1 cut(s) 327
BanI GGYRCC 1 cut(s) 427
BanII GRGCYC 1 cut(s) 318
BauI CACGAG 2 cut(s) 84, 537
Bbv12I GWGCWC 1 cut(s) 318
BbvCI CCTCAGC 1 cut(s) 405
BbvI GCAGC 1 cut(s) 189
BccI CCATC 5 cut(s) 140, 223, 470, 614, 647
BceAI ACGGC 2 cut(s) 152, 305
BciT130I CCWGG 2 cut(s) 275, 454
BclI TGATCA 1 cut(s) 466
BcnI CCSGG 1 cut(s) 688
BcoDI GTCTC 4 cut(s) 85, 383, 665, 682
BfaI CTAG 2 cut(s) 176, 320
BfmI CTRYAG 1 cut(s) 203
BfoI RGCGCY 1 cut(s) 295
BisI GCNGC 3 cut(s) 203, 426, 589
BlnI CCTAGG 1 cut(s) 319
BlsI GCNGC 3 cut(s) 204, 427, 590
Bme1390I CCNGG 3 cut(s) 275, 454, 688
Bme18I GGWCC 4 cut(s) 18, 28, 271, 612
BmeT110I CYCGRG 1 cut(s) 311
BmgT120I GGNCC 4 cut(s) 18, 28, 271, 612
BmiI GGNNCC 5 cut(s) 19, 234, 429, 613, 614
BmrFI CCNGG 3 cut(s) 275, 454, 688
BmsI GCATC 1 cut(s) 356
BplI GAGNNNNNCTC 1 cut(s) 662
BpmI CTGGAG 1 cut(s) 296
Bpu10I CCTNAGC 1 cut(s) 405
BpuMI CCSGG 1 cut(s) 688
BsaHI GRCGYC 1 cut(s) 575
BsaI GGTCTC 1 cut(s) 665
BsaJI CCNNGG 7 cut(s) 21, 35, 319, 399, 452, 453, 600
BsaWI WCCGGW 3 cut(s) 430, 511, 568
BsaXI ACNNNNNCTCC 4 cut(s) 317, 347, 615, 645
Bsc4I CCNNNNNNNGG 5 cut(s) 37, 280, 376, 437, 687
Bse118I RCCGGY 3 cut(s) 421, 430, 568
Bse1I ACTGG 1 cut(s) 244
Bse21I CCTNAGG 1 cut(s) 371
BseBI CCWGG 2 cut(s) 275, 454
BseDI CCNNGG 7 cut(s) 21, 35, 319, 399, 452, 453, 600
BseGI GGATG 3 cut(s) 82, 469, 481
BseLI CCNNNNNNNGG 5 cut(s) 37, 280, 376, 437, 687
BseMII CTCAG 2 cut(s) 396, 585
BseNI ACTGG 1 cut(s) 244
BseSI GKGCMC 1 cut(s) 327
BseXI GCAGC 1 cut(s) 189
BshNI GGYRCC 1 cut(s) 427
BshTI ACCGGT 2 cut(s) 430, 568
BsiHKAI GWGCWC 1 cut(s) 318
BsiHKCI CYCGRG 1 cut(s) 311
BsiSI CCGG 5 cut(s) 422, 431, 512, 569, 687
BsiWI CGTACG 1 cut(s) 286
BslFI GGGAC 4 cut(s) 31, 271, 435, 598
BslI CCNNNNNNNGG 5 cut(s) 37, 280, 376, 437, 687
BsmAI GTCTC 4 cut(s) 85, 383, 665, 682
BsmBI CGTCTC 1 cut(s) 682
BsmFI GGGAC 4 cut(s) 31, 271, 435, 598
Bso31I GGTCTC 1 cut(s) 665
BsoBI CYCGRG 1 cut(s) 311
Bsp1286I GDGCHC 2 cut(s) 318, 327
Bsp143I GATC 3 cut(s) 126, 189, 466
Bsp19I CCATGG 2 cut(s) 399, 600
BspACI CCGC 3 cut(s) 410, 425, 588
BspCNI CTCAG 2 cut(s) 397, 586
BspHI TCATGA 2 cut(s) 67, 469
BspLI GGNNCC 5 cut(s) 19, 234, 429, 613, 614
BspMAI CTGCAG 1 cut(s) 207
BspPI GGATC 2 cut(s) 121, 197
BspT107I GGYRCC 1 cut(s) 427
BspTNI GGTCTC 1 cut(s) 665
BsrFI RCCGGY 3 cut(s) 421, 430, 568
BsrI ACTGG 1 cut(s) 244
BssAI RCCGGY 3 cut(s) 421, 430, 568
BssECI CCNNGG 7 cut(s) 21, 35, 319, 399, 452, 453, 600
BssMI GATC 3 cut(s) 126, 189, 466
BssNI GRCGYC 1 cut(s) 575
BssSI CACGAG 2 cut(s) 84, 537
BssT1I CCWWGG 3 cut(s) 319, 399, 600
Bst2BI CACGAG 2 cut(s) 84, 537
Bst2UI CCWGG 2 cut(s) 275, 454
Bst4CI ACNGT 5 cut(s) 22, 241, 329, 497, 676
Bst6I CTCTTC 1 cut(s) 453
BstACI GRCGYC 1 cut(s) 575
BstAPI GCANNNNNTGC 1 cut(s) 646
BstC8I GCNNGC 3 cut(s) 120, 423, 486
BstDEI CTNAG 3 cut(s) 371, 405, 594
BstDSI CCRYGG 4 cut(s) 21, 35, 399, 600
BstENI CCTNNNNNAGG 1 cut(s) 374
BstF5I GGATG 3 cut(s) 82, 469, 481
BstH2I RGCGCY 1 cut(s) 295
BstHHI GCGC 1 cut(s) 294
BstKTI GATC 3 cut(s) 129, 192, 469
BstMAI GTCTC 4 cut(s) 85, 383, 665, 682
BstMBI GATC 3 cut(s) 126, 189, 466
BstMWI GCNNNNNNNGC 3 cut(s) 322, 646, 655
BstNI CCWGG 2 cut(s) 275, 454
BstNSI RCATGY 2 cut(s) 163, 226
BstSCI CCNGG 3 cut(s) 273, 452, 686
BstSFI CTRYAG 1 cut(s) 203
BstSLI GKGCMC 1 cut(s) 327
BstV1I GCAGC 1 cut(s) 189
BstX2I RGATCY 1 cut(s) 189
BstXI CCANNNNNNTGG 1 cut(s) 251
BstYI RGATCY 1 cut(s) 189
Bsu36I CCTNAGG 1 cut(s) 371
BtgI CCRYGG 4 cut(s) 21, 35, 399, 600
BtsCI GGATG 3 cut(s) 82, 469, 481
BtsIMutI CAGTG 1 cut(s) 325
Cac8I GCNNGC 3 cut(s) 120, 423, 486
CciI TCATGA 2 cut(s) 67, 469
CfoI GCGC 1 cut(s) 294
Cfr10I RCCGGY 3 cut(s) 421, 430, 568
Cfr13I GGNCC 4 cut(s) 18, 28, 271, 612
CseI GACGC 1 cut(s) 564
Csp6I GTAC 1 cut(s) 287
CspAI ACCGGT 2 cut(s) 430, 568
CspCI CAANNNNNGTGG 2 cut(s) 520, 555
CviAII CATG 9 cut(s) 68, 160, 223, 353, 400, 470, 601, 641, 650
CviQI GTAC 1 cut(s) 287
DdeI CTNAG 3 cut(s) 371, 405, 594
DpnI GATC 3 cut(s) 128, 191, 468
DpnII GATC 3 cut(s) 126, 189, 466
DraIII CACNNNGTG 1 cut(s) 41
Eam1104I CTCTTC 1 cut(s) 453
EarI CTCTTC 1 cut(s) 453
Ecl136II GAGCTC 1 cut(s) 316
Eco130I CCWWGG 3 cut(s) 319, 399, 600
Eco24I GRGCYC 1 cut(s) 318
Eco31I GGTCTC 1 cut(s) 665
Eco47I GGWCC 4 cut(s) 18, 28, 271, 612
Eco53kI GAGCTC 1 cut(s) 316
Eco81I CCTNAGG 1 cut(s) 371
Eco88I CYCGRG 1 cut(s) 311
EcoICRI GAGCTC 1 cut(s) 316
EcoNI CCTNNNNNAGG 1 cut(s) 374
EcoO109I RGGNCCY 2 cut(s) 271, 612
EcoRII CCWGG 2 cut(s) 273, 452
EcoT14I CCWWGG 3 cut(s) 319, 399, 600
EcoT38I GRGCYC 1 cut(s) 318
ErhI CCWWGG 3 cut(s) 319, 399, 600
Esp3I CGTCTC 1 cut(s) 682
FaeI CATG 9 cut(s) 71, 163, 226, 356, 403, 473, 604, 644, 653
FalI AAGNNNNNCTT 2 cut(s) 164, 196
FaqI GGGAC 4 cut(s) 31, 271, 435, 598
FatI CATG 9 cut(s) 67, 159, 222, 352, 399, 469, 600, 640, 649
FauI CCCGC 1 cut(s) 403
FbaI TGATCA 1 cut(s) 466
Fnu4HI GCNGC 3 cut(s) 203, 426, 589
FokI GGATG 3 cut(s) 89, 476, 488
FriOI GRGCYC 1 cut(s) 318
Fsp4HI GCNGC 3 cut(s) 203, 426, 589
FspBI CTAG 2 cut(s) 176, 320
GlaI GCGC 1 cut(s) 293
GluI GCNGC 3 cut(s) 203, 426, 589
GsuI CTGGAG 1 cut(s) 296
HaeII RGCGCY 1 cut(s) 295
HapII CCGG 5 cut(s) 422, 431, 512, 569, 687
HgaI GACGC 1 cut(s) 564
HhaI GCGC 1 cut(s) 294
Hin1I GRCGYC 1 cut(s) 575
Hin1II CATG 9 cut(s) 71, 163, 226, 356, 403, 473, 604, 644, 653
Hin6I GCGC 1 cut(s) 292
HinP1I GCGC 1 cut(s) 292
HinfI GANTC 3 cut(s) 349, 383, 596
HpaII CCGG 5 cut(s) 422, 431, 512, 569, 687
HphI GGTGA 2 cut(s) 53, 558
Hpy166II GTNNAC 5 cut(s) 44, 283, 517, 566, 579
Hpy188I TCNGA 3 cut(s) 219, 388, 595
Hpy188III TCNNGA 4 cut(s) 68, 133, 154, 470
Hpy8I GTNNAC 5 cut(s) 44, 283, 517, 566, 579
HpyAV CCTTC 1 cut(s) 520
HpyCH4III ACNGT 5 cut(s) 22, 241, 329, 497, 676
HpyCH4IV ACGT 2 cut(s) 46, 285
HpyCH4V TGCA 3 cut(s) 205, 640, 649
HpyF10VI GCNNNNNNNGC 3 cut(s) 322, 646, 655
HpyF3I CTNAG 3 cut(s) 371, 405, 594
HpySE526I ACGT 2 cut(s) 46, 285
Hsp92I GRCGYC 1 cut(s) 575
Hsp92II CATG 9 cut(s) 71, 163, 226, 356, 403, 473, 604, 644, 653
HspAI GCGC 1 cut(s) 292
KflI GGGWCCC 1 cut(s) 612
KroI GCCGGC 1 cut(s) 421
KroNI GCCGGC 1 cut(s) 423
Ksp22I TGATCA 1 cut(s) 466
Kzo9I GATC 3 cut(s) 126, 189, 466
LmnI GCTCC 2 cut(s) 321, 338
Lsp1109I GCAGC 1 cut(s) 189
LweI GCATC 1 cut(s) 356
MaeI CTAG 2 cut(s) 176, 320
MaeII ACGT 2 cut(s) 46, 285
MaeIII GTNAC 2 cut(s) 196, 414
MalI GATC 3 cut(s) 128, 191, 468
MboI GATC 3 cut(s) 126, 189, 466
MboII GAAGA 3 cut(s) 392, 470, 535
MflI RGATCY 1 cut(s) 189
MhlI GDGCHC 2 cut(s) 318, 327
MlyI GAGTC 1 cut(s) 605
MmeI TCCRAC 1 cut(s) 55
MroNI GCCGGC 1 cut(s) 421
MslI CAYNNNNRTG 2 cut(s) 227, 474
MspI CCGG 5 cut(s) 422, 431, 512, 569, 687
MspR9I CCNGG 3 cut(s) 275, 454, 688
MvaI CCWGG 2 cut(s) 275, 454
MwoI GCNNNNNNNGC 3 cut(s) 322, 646, 655
NaeI GCCGGC 1 cut(s) 423
NciI CCSGG 1 cut(s) 688
NcoI CCATGG 2 cut(s) 399, 600
NdeII GATC 3 cut(s) 126, 189, 466
NgoMIV GCCGGC 1 cut(s) 421
NlaIII CATG 9 cut(s) 71, 163, 226, 356, 403, 473, 604, 644, 653
NlaIV GGNNCC 5 cut(s) 19, 234, 429, 613, 614
NmuCI GTSAC 1 cut(s) 414
NspI RCATGY 2 cut(s) 163, 226
PaeR7I CTCGAG 1 cut(s) 311
PagI TCATGA 2 cut(s) 67, 469
PasI CCCWGGG 1 cut(s) 453
PciI ACATGT 1 cut(s) 159
PcsI WCGNNNNNNNCGW 1 cut(s) 43
PdiI GCCGGC 1 cut(s) 423
PfeI GAWTC 2 cut(s) 349, 383
Pfl23II CGTACG 1 cut(s) 286
PfoI TCCNGGA 1 cut(s) 273
PinAI ACCGGT 2 cut(s) 430, 568
PkrI GCNGC 3 cut(s) 204, 427, 590
PleI GAGTC 1 cut(s) 604
PpsI GAGTC 1 cut(s) 604
PpuMI RGGWCCY 2 cut(s) 271, 612
PscI ACATGT 1 cut(s) 159
Psp124BI GAGCTC 1 cut(s) 318
Psp1406I AACGTT 1 cut(s) 46
Psp5II RGGWCCY 2 cut(s) 271, 612
Psp6I CCWGG 2 cut(s) 273, 452
PspGI CCWGG 2 cut(s) 273, 452
PspLI CGTACG 1 cut(s) 286
PspN4I GGNNCC 5 cut(s) 19, 234, 429, 613, 614
PspPI GGNCC 4 cut(s) 18, 28, 271, 612
PspPPI RGGWCCY 2 cut(s) 271, 612
PspXI VCTCGAGB 1 cut(s) 311
PstI CTGCAG 1 cut(s) 207
PsuI RGATCY 1 cut(s) 189
RsaI GTAC 1 cut(s) 288
RsaNI GTAC 1 cut(s) 287
RseI CAYNNNNRTG 2 cut(s) 227, 474
SacI GAGCTC 1 cut(s) 318
SatI GCNGC 3 cut(s) 203, 426, 589
Sau3AI GATC 3 cut(s) 126, 189, 466
Sau96I GGNCC 4 cut(s) 18, 28, 271, 612
SchI GAGTC 1 cut(s) 605
ScrFI CCNGG 3 cut(s) 275, 454, 688
SduI GDGCHC 2 cut(s) 318, 327
SfaNI GCATC 1 cut(s) 356
SfcI CTRYAG 1 cut(s) 203
Sfr274I CTCGAG 1 cut(s) 311
SgrAI CRCCGGYG 2 cut(s) 430, 568
SinI GGWCC 4 cut(s) 18, 28, 271, 612
SlaI CTCGAG 1 cut(s) 311
SmiMI CAYNNNNRTG 2 cut(s) 227, 474
SmlI CTYRAG 1 cut(s) 311
SmoI CTYRAG 1 cut(s) 311
SsiI CCGC 3 cut(s) 410, 425, 588
SspMI CTAG 2 cut(s) 176, 320
SstI GAGCTC 1 cut(s) 318
StyD4I CCNGG 3 cut(s) 273, 452, 686
StyI CCWWGG 3 cut(s) 319, 399, 600
TaaI ACNGT 5 cut(s) 22, 241, 329, 497, 676
TaiI ACGT 2 cut(s) 49, 288
TaqI TCGA 2 cut(s) 155, 312
TauI GCSGC 2 cut(s) 428, 591
TfiI GAWTC 2 cut(s) 349, 383
TscAI CASTG 1 cut(s) 332
TseFI GTSAC 1 cut(s) 414
TseI GCWGC 1 cut(s) 202
Tsp45I GTSAC 1 cut(s) 414
TspRI CASTG 1 cut(s) 332
VpaK11BI GGWCC 4 cut(s) 18, 28, 271, 612
XagI CCTNNNNNAGG 1 cut(s) 374
XceI RCATGY 2 cut(s) 163, 226
XcmI CCANNNNNNNNNTGG 2 cut(s) 251, 496
XhoI CTCGAG 1 cut(s) 311
XmaJI CCTAGG 1 cut(s) 319
XspI CTAG 2 cut(s) 176, 320
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.