TMV resistance protein N-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 672 |
| AccB1I | GGYRCC | 1 cut(s) | 237 |
| AccI | GTMKAC | 1 cut(s) | 894 |
| AciI | CCGC | 2 cut(s) | 61, 854 |
| AclWI | GGATC | 2 cut(s) | 266, 522 |
| AcsI | RAATTY | 1 cut(s) | 1143 |
| AcuI | CTGAAG | 1 cut(s) | 714 |
| AdeI | CACNNNGTG | 1 cut(s) | 341 |
| AfaI | GTAC | 1 cut(s) | 464 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 234, 1097 |
| AflIII | ACRYGT | 2 cut(s) | 370, 579 |
| AgsI | TTSAA | 3 cut(s) | 695, 713, 1028 |
| AjnI | CCWGG | 2 cut(s) | 1104, 1122 |
| AleI | CACNNNNGTG | 1 cut(s) | 235 |
| AluBI | AGCT | 7 cut(s) | 348, 617, 705, 1057, 1111, 1172, 1230 |
| AluI | AGCT | 7 cut(s) | 348, 617, 705, 1057, 1111, 1172, 1230 |
| Alw26I | GTCTC | 2 cut(s) | 791, 1185 |
| AlwI | GGATC | 2 cut(s) | 266, 522 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 806 |
| AoxI | GGCC | 1 cut(s) | 66 |
| ApeKI | GCWGC | 1 cut(s) | 5 |
| ApoI | RAATTY | 1 cut(s) | 1143 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 360, 392 |
| AspA2I | CCTAGG | 1 cut(s) | 1165 |
| AspLEI | GCGC | 1 cut(s) | 104 |
| AspS9I | GGNCC | 1 cut(s) | 904 |
| AsuC2I | CCSGG | 1 cut(s) | 948 |
| AsuHPI | GGTGA | 3 cut(s) | 71, 180, 340 |
| AsuII | TTCGAA | 2 cut(s) | 1095, 1115 |
| AvaII | GGWCC | 1 cut(s) | 904 |
| AvrII | CCTAGG | 1 cut(s) | 1165 |
| BanI | GGYRCC | 1 cut(s) | 237 |
| BanII | GRGCYC | 1 cut(s) | 418 |
| BauI | CACGAG | 1 cut(s) | 977 |
| BbsI | GAAGAC | 1 cut(s) | 199 |
| BccI | CCATC | 5 cut(s) | 328, 439, 489, 649, 1095 |
| BceAI | ACGGC | 1 cut(s) | 998 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 344, 378 |
| BciT130I | CCWGG | 2 cut(s) | 1106, 1124 |
| BciVI | GTATCC | 1 cut(s) | 1094 |
| BcnI | CCSGG | 1 cut(s) | 948 |
| BcoDI | GTCTC | 2 cut(s) | 791, 1185 |
| BfaI | CTAG | 2 cut(s) | 972, 1166 |
| BfmI | CTRYAG | 3 cut(s) | 85, 685, 807 |
| BfuI | GTATCC | 1 cut(s) | 1094 |
| BisI | GCNGC | 1 cut(s) | 6 |
| BlnI | CCTAGG | 1 cut(s) | 1165 |
| BlsI | GCNGC | 1 cut(s) | 7 |
| Bme1390I | CCNGG | 3 cut(s) | 948, 1106, 1124 |
| Bme18I | GGWCC | 1 cut(s) | 904 |
| BmgT120I | GGNCC | 1 cut(s) | 904 |
| BmiI | GGNNCC | 2 cut(s) | 148, 239 |
| BmrFI | CCNGG | 3 cut(s) | 948, 1106, 1124 |
| BmrI | ACTGGG | 1 cut(s) | 466 |
| BmsI | GCATC | 1 cut(s) | 498 |
| BmuI | ACTGGG | 1 cut(s) | 466 |
| BpiI | GAAGAC | 1 cut(s) | 199 |
| Bpu14I | TTCGAA | 2 cut(s) | 1095, 1115 |
| BpuEI | CTTGAG | 2 cut(s) | 58, 1073 |
| BpuMI | CCSGG | 1 cut(s) | 948 |
| Bsa29I | ATCGAT | 1 cut(s) | 595 |
| BsaBI | GATNNNNATC | 1 cut(s) | 315 |
| BsaJI | CCNNGG | 1 cut(s) | 1165 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 432, 462 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 234, 1097 |
| Bse1I | ACTGG | 3 cut(s) | 191, 472, 907 |
| Bse8I | GATNNNNATC | 1 cut(s) | 315 |
| BseBI | CCWGG | 2 cut(s) | 1106, 1124 |
| BseCI | ATCGAT | 1 cut(s) | 595 |
| BseDI | CCNNGG | 1 cut(s) | 1165 |
| BseGI | GGATG | 4 cut(s) | 450, 477, 513, 1087 |
| BseJI | GATNNNNATC | 1 cut(s) | 315 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 234, 1097 |
| BseMII | CTCAG | 1 cut(s) | 1196 |
| BseNI | ACTGG | 3 cut(s) | 191, 472, 907 |
| BseRI | GAGGAG | 3 cut(s) | 4, 159, 416 |
| Bsh1285I | CGRYCG | 1 cut(s) | 599 |
| BshFI | GGCC | 1 cut(s) | 68 |
| BshNI | GGYRCC | 1 cut(s) | 237 |
| BshVI | ATCGAT | 1 cut(s) | 595 |
| BsiEI | CGRYCG | 1 cut(s) | 599 |
| BsiSI | CCGG | 1 cut(s) | 947 |
| BslFI | GGGAC | 1 cut(s) | 454 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 234, 1097 |
| BsmAI | GTCTC | 2 cut(s) | 791, 1185 |
| BsmFI | GGGAC | 1 cut(s) | 454 |
| BsmI | GAATGC | 1 cut(s) | 558 |
| BsnI | GGCC | 1 cut(s) | 68 |
| Bsp119I | TTCGAA | 2 cut(s) | 1095, 1115 |
| Bsp1286I | GDGCHC | 1 cut(s) | 418 |
| Bsp143I | GATC | 8 cut(s) | 76, 135, 258, 457, 514, 592, 596, 994 |
| BspACI | CCGC | 2 cut(s) | 61, 854 |
| BspANI | GGCC | 1 cut(s) | 68 |
| BspCNI | CTCAG | 1 cut(s) | 1195 |
| BspDI | ATCGAT | 1 cut(s) | 595 |
| BspLI | GGNNCC | 2 cut(s) | 148, 239 |
| BspPI | GGATC | 2 cut(s) | 266, 522 |
| BspQI | GCTCTTC | 1 cut(s) | 406 |
| BspT104I | TTCGAA | 2 cut(s) | 1095, 1115 |
| BspT107I | GGYRCC | 1 cut(s) | 237 |
| BsrI | ACTGG | 3 cut(s) | 191, 472, 907 |
| BssECI | CCNNGG | 1 cut(s) | 1165 |
| BssMI | GATC | 8 cut(s) | 76, 135, 258, 457, 514, 592, 596, 994 |
| BssSI | CACGAG | 1 cut(s) | 977 |
| BssT1I | CCWWGG | 1 cut(s) | 1165 |
| Bst2BI | CACGAG | 1 cut(s) | 977 |
| Bst2UI | CCWGG | 2 cut(s) | 1106, 1124 |
| Bst4CI | ACNGT | 3 cut(s) | 23, 89, 234 |
| Bst6I | CTCTTC | 1 cut(s) | 406 |
| BstBI | TTCGAA | 2 cut(s) | 1095, 1115 |
| BstC8I | GCNNGC | 2 cut(s) | 632, 1071 |
| BstDEI | CTNAG | 2 cut(s) | 419, 1182 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1095 |
| BstF5I | GGATG | 4 cut(s) | 450, 477, 513, 1087 |
| BstHHI | GCGC | 1 cut(s) | 104 |
| BstKTI | GATC | 8 cut(s) | 79, 138, 261, 460, 517, 595, 599, 997 |
| BstMAI | GTCTC | 2 cut(s) | 791, 1185 |
| BstMBI | GATC | 8 cut(s) | 76, 135, 258, 457, 514, 592, 596, 994 |
| BstMCI | CGRYCG | 1 cut(s) | 599 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 155 |
| BstNI | CCWGG | 2 cut(s) | 1106, 1124 |
| BstNSI | RCATGY | 4 cut(s) | 374, 583, 854, 1085 |
| BstSCI | CCNGG | 3 cut(s) | 946, 1104, 1122 |
| BstSFI | CTRYAG | 3 cut(s) | 85, 685, 807 |
| BstV2I | GAAGAC | 1 cut(s) | 199 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 791 |
| Bsu15I | ATCGAT | 1 cut(s) | 595 |
| BsuI | GTATCC | 1 cut(s) | 1094 |
| BsuRI | GGCC | 1 cut(s) | 68 |
| BsuTUI | ATCGAT | 1 cut(s) | 595 |
| BtsCI | GGATG | 4 cut(s) | 450, 477, 513, 1087 |
| BtsI | GCAGTG | 1 cut(s) | 104 |
| BtsIMutI | CAGTG | 3 cut(s) | 94, 104, 239 |
| Cac8I | GCNNGC | 2 cut(s) | 632, 1071 |
| CaiI | CAGNNNCTG | 1 cut(s) | 806 |
| CfoI | GCGC | 1 cut(s) | 104 |
| Cfr13I | GGNCC | 1 cut(s) | 904 |
| ClaI | ATCGAT | 1 cut(s) | 595 |
| CsiI | ACCWGGT | 1 cut(s) | 1122 |
| Csp6I | GTAC | 1 cut(s) | 463 |
| CviAII | CATG | 9 cut(s) | 29, 182, 262, 371, 485, 580, 851, 1010, 1082 |
| CviQI | GTAC | 1 cut(s) | 463 |
| DdeI | CTNAG | 2 cut(s) | 419, 1182 |
| DpnI | GATC | 8 cut(s) | 78, 137, 260, 459, 516, 594, 598, 996 |
| DpnII | GATC | 8 cut(s) | 76, 135, 258, 457, 514, 592, 596, 994 |
| DraIII | CACNNNGTG | 1 cut(s) | 341 |
| Eam1104I | CTCTTC | 1 cut(s) | 406 |
| EarI | CTCTTC | 1 cut(s) | 406 |
| Eco130I | CCWWGG | 1 cut(s) | 1165 |
| Eco147I | AGGCCT | 1 cut(s) | 68 |
| Eco24I | GRGCYC | 1 cut(s) | 418 |
| Eco47I | GGWCC | 1 cut(s) | 904 |
| Eco57I | CTGAAG | 1 cut(s) | 714 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1095 |
| EcoRI | GAATTC | 1 cut(s) | 1143 |
| EcoRII | CCWGG | 2 cut(s) | 1104, 1122 |
| EcoT14I | CCWWGG | 1 cut(s) | 1165 |
| EcoT22I | ATGCAT | 1 cut(s) | 558 |
| EcoT38I | GRGCYC | 1 cut(s) | 418 |
| ErhI | CCWWGG | 1 cut(s) | 1165 |
| FaeI | CATG | 9 cut(s) | 32, 185, 265, 374, 488, 583, 854, 1013, 1085 |
| FaqI | GGGAC | 1 cut(s) | 454 |
| FatI | CATG | 9 cut(s) | 28, 181, 261, 370, 484, 579, 850, 1009, 1081 |
| FauI | CCCGC | 1 cut(s) | 68 |
| FblI | GTMKAC | 1 cut(s) | 894 |
| Fnu4HI | GCNGC | 1 cut(s) | 6 |
| FokI | GGATG | 4 cut(s) | 457, 464, 520, 1074 |
| FriOI | GRGCYC | 1 cut(s) | 418 |
| Fsp4HI | GCNGC | 1 cut(s) | 6 |
| FspBI | CTAG | 2 cut(s) | 972, 1166 |
| GlaI | GCGC | 1 cut(s) | 103 |
| GluI | GCNGC | 1 cut(s) | 6 |
| HaeIII | GGCC | 1 cut(s) | 68 |
| HapII | CCGG | 1 cut(s) | 947 |
| HhaI | GCGC | 1 cut(s) | 104 |
| Hin1II | CATG | 9 cut(s) | 32, 185, 265, 374, 488, 583, 854, 1013, 1085 |
| Hin6I | GCGC | 1 cut(s) | 102 |
| HinP1I | GCGC | 1 cut(s) | 102 |
| HincII | GTYRAC | 1 cut(s) | 493 |
| HindII | GTYRAC | 1 cut(s) | 493 |
| HinfI | GANTC | 7 cut(s) | 108, 185, 316, 467, 1003, 1046, 1217 |
| HpaII | CCGG | 1 cut(s) | 947 |
| HphI | GGTGA | 3 cut(s) | 71, 180, 340 |
| Hpy166II | GTNNAC | 2 cut(s) | 493, 895 |
| Hpy188I | TCNGA | 5 cut(s) | 325, 733, 778, 904, 1185 |
| Hpy188III | TCNNGA | 3 cut(s) | 37, 139, 998 |
| Hpy8I | GTNNAC | 2 cut(s) | 493, 895 |
| HpyAV | CCTTC | 4 cut(s) | 79, 498, 824, 1091 |
| HpyCH4III | ACNGT | 3 cut(s) | 23, 89, 234 |
| HpyCH4V | TGCA | 8 cut(s) | 97, 254, 431, 556, 760, 864, 917, 1211 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 155 |
| HpyF3I | CTNAG | 2 cut(s) | 419, 1182 |
| Hsp92II | CATG | 9 cut(s) | 32, 185, 265, 374, 488, 583, 854, 1013, 1085 |
| HspAI | GCGC | 1 cut(s) | 102 |
| Kzo9I | GATC | 8 cut(s) | 76, 135, 258, 457, 514, 592, 596, 994 |
| LguI | GCTCTTC | 1 cut(s) | 406 |
| LmnI | GCTCC | 4 cut(s) | 146, 345, 1108, 1169 |
| LweI | GCATC | 1 cut(s) | 498 |
| MabI | ACCWGGT | 1 cut(s) | 1122 |
| MaeI | CTAG | 2 cut(s) | 972, 1166 |
| MaeIII | GTNAC | 3 cut(s) | 186, 698, 718 |
| MalI | GATC | 8 cut(s) | 78, 137, 260, 459, 516, 594, 598, 996 |
| MboI | GATC | 8 cut(s) | 76, 135, 258, 457, 514, 592, 596, 994 |
| MboII | GAAGA | 5 cut(s) | 199, 423, 725, 746, 1148 |
| MhlI | GDGCHC | 1 cut(s) | 418 |
| MluCI | AATT | 6 cut(s) | 201, 543, 639, 918, 957, 1143 |
| MlyI | GAGTC | 3 cut(s) | 194, 476, 1226 |
| MmeI | TCCRAC | 1 cut(s) | 529 |
| Mph1103I | ATGCAT | 1 cut(s) | 558 |
| MseI | TTAA | 6 cut(s) | 528, 587, 753, 846, 911, 990 |
| MslI | CAYNNNNRTG | 2 cut(s) | 235, 561 |
| MspI | CCGG | 1 cut(s) | 947 |
| MspR9I | CCNGG | 3 cut(s) | 948, 1106, 1124 |
| Mva1269I | GAATGC | 1 cut(s) | 558 |
| MvaI | CCWGG | 2 cut(s) | 1106, 1124 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 155 |
| NciI | CCSGG | 1 cut(s) | 948 |
| NdeII | GATC | 8 cut(s) | 76, 135, 258, 457, 514, 592, 596, 994 |
| NlaIII | CATG | 9 cut(s) | 32, 185, 265, 374, 488, 583, 854, 1013, 1085 |
| NlaIV | GGNNCC | 2 cut(s) | 148, 239 |
| NmuCI | GTSAC | 2 cut(s) | 186, 718 |
| NsiI | ATGCAT | 1 cut(s) | 558 |
| NspI | RCATGY | 4 cut(s) | 374, 583, 854, 1085 |
| NspV | TTCGAA | 2 cut(s) | 1095, 1115 |
| OliI | CACNNNNGTG | 1 cut(s) | 235 |
| PceI | AGGCCT | 1 cut(s) | 68 |
| PciI | ACATGT | 2 cut(s) | 370, 579 |
| PciSI | GCTCTTC | 1 cut(s) | 406 |
| PctI | GAATGC | 1 cut(s) | 558 |
| PfeI | GAWTC | 4 cut(s) | 108, 316, 1003, 1046 |
| PfoI | TCCNGGA | 1 cut(s) | 946 |
| PkrI | GCNGC | 1 cut(s) | 7 |
| Ple19I | CGATCG | 1 cut(s) | 599 |
| PleI | GAGTC | 3 cut(s) | 193, 475, 1225 |
| PpsI | GAGTC | 3 cut(s) | 193, 475, 1225 |
| PscI | ACATGT | 2 cut(s) | 370, 579 |
| PsiI | TTATAA | 1 cut(s) | 672 |
| Psp6I | CCWGG | 2 cut(s) | 1104, 1122 |
| PspGI | CCWGG | 2 cut(s) | 1104, 1122 |
| PspN4I | GGNNCC | 2 cut(s) | 148, 239 |
| PspPI | GGNCC | 1 cut(s) | 904 |
| PstNI | CAGNNNCTG | 1 cut(s) | 806 |
| PvuI | CGATCG | 1 cut(s) | 599 |
| RsaI | GTAC | 1 cut(s) | 464 |
| RsaNI | GTAC | 1 cut(s) | 463 |
| RseI | CAYNNNNRTG | 2 cut(s) | 235, 561 |
| SapI | GCTCTTC | 1 cut(s) | 406 |
| SaqAI | TTAA | 6 cut(s) | 528, 587, 753, 846, 911, 990 |
| SatI | GCNGC | 1 cut(s) | 6 |
| Sau3AI | GATC | 8 cut(s) | 76, 135, 258, 457, 514, 592, 596, 994 |
| Sau96I | GGNCC | 1 cut(s) | 904 |
| SchI | GAGTC | 3 cut(s) | 194, 476, 1226 |
| ScrFI | CCNGG | 3 cut(s) | 948, 1106, 1124 |
| SduI | GDGCHC | 1 cut(s) | 418 |
| SexAI | ACCWGGT | 1 cut(s) | 1122 |
| SfaNI | GCATC | 1 cut(s) | 498 |
| SfcI | CTRYAG | 3 cut(s) | 85, 685, 807 |
| SfuI | TTCGAA | 2 cut(s) | 1095, 1115 |
| SinI | GGWCC | 1 cut(s) | 904 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 235, 561 |
| SmlI | CTYRAG | 2 cut(s) | 37, 1052 |
| SmoI | CTYRAG | 2 cut(s) | 37, 1052 |
| Sse9I | AATT | 6 cut(s) | 201, 543, 639, 918, 957, 1143 |
| SseBI | AGGCCT | 1 cut(s) | 68 |
| SsiI | CCGC | 2 cut(s) | 61, 854 |
| SspMI | CTAG | 2 cut(s) | 972, 1166 |
| StuI | AGGCCT | 1 cut(s) | 68 |
| StyD4I | CCNGG | 3 cut(s) | 946, 1104, 1122 |
| StyI | CCWWGG | 1 cut(s) | 1165 |
| TaaI | ACNGT | 3 cut(s) | 23, 89, 234 |
| TaqI | TCGA | 7 cut(s) | 378, 595, 599, 609, 661, 1095, 1115 |
| TasI | AATT | 6 cut(s) | 201, 543, 639, 918, 957, 1143 |
| TfiI | GAWTC | 4 cut(s) | 108, 316, 1003, 1046 |
| Tru1I | TTAA | 6 cut(s) | 528, 587, 753, 846, 911, 990 |
| Tru9I | TTAA | 6 cut(s) | 528, 587, 753, 846, 911, 990 |
| TscAI | CASTG | 3 cut(s) | 94, 104, 239 |
| TseFI | GTSAC | 2 cut(s) | 186, 718 |
| TseI | GCWGC | 1 cut(s) | 5 |
| Tsp45I | GTSAC | 2 cut(s) | 186, 718 |
| TspDTI | ATGAA | 5 cut(s) | 466, 843, 1059, 1148, 1212 |
| TspRI | CASTG | 3 cut(s) | 94, 104, 239 |
| VpaK11BI | GGWCC | 1 cut(s) | 904 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1095 |
| XapI | RAATTY | 1 cut(s) | 1143 |
| XceI | RCATGY | 4 cut(s) | 374, 583, 854, 1085 |
| XmaJI | CCTAGG | 1 cut(s) | 1165 |
| XmiI | GTMKAC | 1 cut(s) | 894 |
| XspI | CTAG | 2 cut(s) | 972, 1166 |
| Zsp2I | ATGCAT | 1 cut(s) | 558 |