NB-ARC domain
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 21 - 187 | 1.3e-43 | TIR domain |
| TIR_2 | PF13676 | 23 - 141 | 5.5e-10 | TIR domain |
| NB-ARC | PF00931 | 194 - 363 | 6.5e-21 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 430 - 498 | 4.8e-17 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_14 | PF23598 | 622 - 733 | 1e-05 | Leucine-rich repeat region |
| NB-ARC | PF00931 | 921 - 1082 | 6.6e-16 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 1152 - 1223 | 1.1e-20 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_13 | PF23286 | 1347 - 1546 | 2.2e-06 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 1385 - 1452 | 6.7e-06 | Leucine-rich repeat region |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 3 cut(s) | 1400, 2850, 4277 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 4793 |
| AatII | GACGTC | 1 cut(s) | 4164 |
| Acc65I | GGTACC | 1 cut(s) | 5617 |
| AccB1I | GGYRCC | 3 cut(s) | 240, 1614, 5617 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2375 |
| AccI | GTMKAC | 1 cut(s) | 5297 |
| AccII | CGCG | 5 cut(s) | 97, 227, 1109, 3786, 4497 |
| AciI | CCGC | 6 cut(s) | 126, 1109, 4095, 4497, 5515, 5535 |
| AcoI | YGGCCR | 1 cut(s) | 550 |
| AcuI | CTGAAG | 2 cut(s) | 682, 1119 |
| AcyI | GRCGYC | 2 cut(s) | 3703, 4161 |
| AdeI | CACNNNGTG | 1 cut(s) | 3407 |
| AflII | CTTAAG | 1 cut(s) | 2275 |
| AflIII | ACRYGT | 4 cut(s) | 95, 225, 631, 679 |
| AhlI | ACTAGT | 1 cut(s) | 2026 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 1747, 1779, 4231, 4263 |
| Alw21I | GWGCWC | 1 cut(s) | 1023 |
| Alw26I | GTCTC | 4 cut(s) | 1843, 2175, 3679, 4183 |
| Alw44I | GTGCAC | 1 cut(s) | 1019 |
| Ama87I | CYCGRG | 3 cut(s) | 576, 2739, 3671 |
| AoxI | GGCC | 7 cut(s) | 550, 1432, 1915, 2377, 2742, 4415, 4888 |
| ApaLI | GTGCAC | 1 cut(s) | 1019 |
| ApeKI | GCWGC | 7 cut(s) | 1499, 1842, 3830, 4008, 4287, 5465, 5468 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 3803, 3835 |
| AseI | ATTAAT | 2 cut(s) | 591, 2754 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 1233, 1737, 2734, 3630 |
| Asp718I | GGTACC | 1 cut(s) | 5617 |
| AspLEI | GCGC | 5 cut(s) | 2697, 3786, 3788, 4661, 5498 |
| AspS9I | GGNCC | 7 cut(s) | 279, 611, 910, 1433, 2742, 3073, 5384 |
| AsuC2I | CCSGG | 5 cut(s) | 165, 235, 1144, 2740, 2741 |
| AsuHPI | GGTGA | 6 cut(s) | 100, 412, 527, 1462, 4888, 5360 |
| AsuII | TTCGAA | 3 cut(s) | 708, 2535, 3427 |
| AsuNHI | GCTAGC | 2 cut(s) | 830, 2327 |
| AvaI | CYCGRG | 3 cut(s) | 576, 2739, 3671 |
| AvaII | GGWCC | 5 cut(s) | 279, 611, 910, 3073, 5384 |
| AxyI | CCTNAGG | 1 cut(s) | 2704 |
| BaeGI | GKGCMC | 1 cut(s) | 1023 |
| BalI | TGGCCA | 1 cut(s) | 552 |
| BamHI | GGATCC | 2 cut(s) | 319, 3163 |
| BanI | GGYRCC | 3 cut(s) | 240, 1614, 5617 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 804, 836 |
| BbsI | GAAGAC | 6 cut(s) | 96, 298, 668, 5148, 5297, 5533 |
| Bbv12I | GWGCWC | 1 cut(s) | 1023 |
| BbvI | GCAGC | 7 cut(s) | 1511, 1854, 3817, 4020, 4274, 5477, 5480 |
| BceAI | ACGGC | 2 cut(s) | 2551, 2708 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 1010, 1044, 1061, 1095 |
| BciVI | GTATCC | 1 cut(s) | 594 |
| BcnI | CCSGG | 5 cut(s) | 165, 235, 1144, 2740, 2741 |
| BcoDI | GTCTC | 4 cut(s) | 1843, 2175, 3679, 4183 |
| BcuI | ACTAGT | 1 cut(s) | 2026 |
| BfmI | CTRYAG | 2 cut(s) | 1743, 3909 |
| BfrI | CTTAAG | 1 cut(s) | 2275 |
| BfuI | GTATCC | 1 cut(s) | 594 |
| BglII | AGATCT | 1 cut(s) | 436 |
| BisI | GCNGC | 8 cut(s) | 1500, 1843, 3831, 4009, 4288, 5466, 5469, 5535 |
| BlsI | GCNGC | 8 cut(s) | 1501, 1844, 3832, 4010, 4289, 5467, 5470, 5536 |
| BmcAI | AGTACT | 3 cut(s) | 3726, 4444, 5476 |
| Bme18I | GGWCC | 5 cut(s) | 279, 611, 910, 3073, 5384 |
| BmeT110I | CYCGRG | 3 cut(s) | 576, 2739, 3671 |
| BmgT120I | GGNCC | 7 cut(s) | 279, 611, 910, 1433, 2742, 3073, 5384 |
| BmrI | ACTGGG | 1 cut(s) | 4401 |
| BmtI | GCTAGC | 2 cut(s) | 834, 2331 |
| BmuI | ACTGGG | 1 cut(s) | 4401 |
| BpiI | GAAGAC | 6 cut(s) | 96, 298, 668, 5148, 5297, 5533 |
| Bpu14I | TTCGAA | 3 cut(s) | 708, 2535, 3427 |
| BpuEI | CTTGAG | 7 cut(s) | 94, 1867, 2429, 2539, 3153, 4033, 4795 |
| BpuMI | CCSGG | 5 cut(s) | 165, 235, 1144, 2740, 2741 |
| Bsa29I | ATCGAT | 2 cut(s) | 943, 2658 |
| BsaBI | GATNNNNATC | 4 cut(s) | 900, 3063, 5448, 5525 |
| BsaHI | GRCGYC | 2 cut(s) | 3703, 4161 |
| BsaJI | CCNNGG | 9 cut(s) | 164, 744, 1511, 1618, 2739, 3159, 3672, 3680, 4871 |
| Bse21I | CCTNAGG | 1 cut(s) | 2704 |
| Bse3DI | GCAATG | 5 cut(s) | 1314, 3377, 3480, 5375, 5529 |
| Bse8I | GATNNNNATC | 4 cut(s) | 900, 3063, 5448, 5525 |
| BseCI | ATCGAT | 2 cut(s) | 943, 2658 |
| BseDI | CCNNGG | 9 cut(s) | 164, 744, 1511, 1618, 2739, 3159, 3672, 3680, 4871 |
| BseJI | GATNNNNATC | 4 cut(s) | 900, 3063, 5448, 5525 |
| BseMI | GCAATG | 5 cut(s) | 1314, 3377, 3480, 5375, 5529 |
| BseMII | CTCAG | 7 cut(s) | 297, 1276, 1709, 1915, 4469, 5521, 5598 |
| BsePI | GCGCGC | 1 cut(s) | 3784 |
| BseRI | GAGGAG | 8 cut(s) | 7, 27, 1520, 3689, 3758, 4339, 4909, 5300 |
| BseSI | GKGCMC | 1 cut(s) | 1023 |
| BseXI | GCAGC | 7 cut(s) | 1511, 1854, 3817, 4020, 4274, 5477, 5480 |
| BsgI | GTGCAG | 1 cut(s) | 5076 |
| Bsh1236I | CGCG | 5 cut(s) | 97, 227, 1109, 3786, 4497 |
| BshFI | GGCC | 7 cut(s) | 552, 1434, 1917, 2379, 2744, 4417, 4890 |
| BshNI | GGYRCC | 3 cut(s) | 240, 1614, 5617 |
| BshVI | ATCGAT | 2 cut(s) | 943, 2658 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1023 |
| BsiHKCI | CYCGRG | 3 cut(s) | 576, 2739, 3671 |
| BsiSI | CCGG | 5 cut(s) | 164, 235, 1143, 1699, 2740 |
| BslFI | GGGAC | 5 cut(s) | 1588, 1932, 2434, 4533, 5517 |
| BsmAI | GTCTC | 4 cut(s) | 1843, 2175, 3679, 4183 |
| BsmBI | CGTCTC | 1 cut(s) | 3679 |
| BsmFI | GGGAC | 5 cut(s) | 1588, 1932, 2434, 4533, 5517 |
| BsmI | GAATGC | 3 cut(s) | 2790, 3849, 5517 |
| BsnI | GGCC | 7 cut(s) | 552, 1434, 1917, 2379, 2744, 4417, 4890 |
| BsoBI | CYCGRG | 3 cut(s) | 576, 2739, 3671 |
| Bsp119I | TTCGAA | 3 cut(s) | 708, 2535, 3427 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1023 |
| Bsp1407I | TGTACA | 2 cut(s) | 3877, 5269 |
| BspACI | CCGC | 6 cut(s) | 126, 1109, 4095, 4497, 5515, 5535 |
| BspANI | GGCC | 7 cut(s) | 552, 1434, 1917, 2379, 2744, 4417, 4890 |
| BspCNI | CTCAG | 7 cut(s) | 296, 1275, 1710, 1914, 4470, 5520, 5597 |
| BspDI | ATCGAT | 2 cut(s) | 943, 2658 |
| BspFNI | CGCG | 5 cut(s) | 97, 227, 1109, 3786, 4497 |
| BspHI | TCATGA | 2 cut(s) | 3414, 4078 |
| BspOI | GCTAGC | 2 cut(s) | 834, 2331 |
| BspQI | GCTCTTC | 2 cut(s) | 1164, 5579 |
| BspT104I | TTCGAA | 3 cut(s) | 708, 2535, 3427 |
| BspT107I | GGYRCC | 3 cut(s) | 240, 1614, 5617 |
| BspTI | CTTAAG | 1 cut(s) | 2275 |
| BsrDI | GCAATG | 5 cut(s) | 1314, 3377, 3480, 5375, 5529 |
| BsrGI | TGTACA | 2 cut(s) | 3877, 5269 |
| BssECI | CCNNGG | 9 cut(s) | 164, 744, 1511, 1618, 2739, 3159, 3672, 3680, 4871 |
| BssHII | GCGCGC | 1 cut(s) | 3784 |
| BssNAI | GTATAC | 1 cut(s) | 5298 |
| BssNI | GRCGYC | 2 cut(s) | 3703, 4161 |
| BssT1I | CCWWGG | 2 cut(s) | 1618, 3159 |
| Bst1107I | GTATAC | 1 cut(s) | 5298 |
| Bst6I | CTCTTC | 8 cut(s) | 25, 802, 1164, 1474, 2146, 3640, 4735, 5579 |
| BstACI | GRCGYC | 2 cut(s) | 3703, 4161 |
| BstAFI | CTTAAG | 1 cut(s) | 2275 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 929, 3628 |
| BstAUI | TGTACA | 2 cut(s) | 3877, 5269 |
| BstBI | TTCGAA | 3 cut(s) | 708, 2535, 3427 |
| BstC8I | GCNNGC | 8 cut(s) | 832, 984, 1074, 2066, 2329, 2564, 3237, 3786 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1098 |
| BstFNI | CGCG | 5 cut(s) | 97, 227, 1109, 3786, 4497 |
| BstHHI | GCGC | 5 cut(s) | 2697, 3786, 3788, 4661, 5498 |
| BstMAI | GTCTC | 4 cut(s) | 1843, 2175, 3679, 4183 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 929, 2333, 2407, 3628, 3676, 3836, 4094, 4261, 5521 |
| BstNSI | RCATGY | 8 cut(s) | 635, 683, 1076, 1609, 2566, 3086, 3239, 3489 |
| BstSFI | CTRYAG | 2 cut(s) | 1743, 3909 |
| BstSLI | GKGCMC | 1 cut(s) | 1023 |
| BstUI | CGCG | 5 cut(s) | 97, 227, 1109, 3786, 4497 |
| BstV1I | GCAGC | 7 cut(s) | 1511, 1854, 3817, 4020, 4274, 5477, 5480 |
| BstV2I | GAAGAC | 6 cut(s) | 96, 298, 668, 5148, 5297, 5533 |
| BstX2I | RGATCY | 6 cut(s) | 319, 436, 1890, 3163, 3890, 5597 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 470, 4680 |
| BstYI | RGATCY | 6 cut(s) | 319, 436, 1890, 3163, 3890, 5597 |
| BstZ17I | GTATAC | 1 cut(s) | 5298 |
| Bsu15I | ATCGAT | 2 cut(s) | 943, 2658 |
| Bsu36I | CCTNAGG | 1 cut(s) | 2704 |
| BsuI | GTATCC | 1 cut(s) | 594 |
| BsuRI | GGCC | 7 cut(s) | 552, 1434, 1917, 2379, 2744, 4417, 4890 |
| BsuTUI | ATCGAT | 2 cut(s) | 943, 2658 |
| BtgZI | GCGATG | 1 cut(s) | 947 |
| BtsIMutI | CAGTG | 9 cut(s) | 1135, 1350, 2298, 2679, 3001, 3307, 5118, 5421, 5566 |
| Cac8I | GCNNGC | 8 cut(s) | 832, 984, 1074, 2066, 2329, 2564, 3237, 3786 |
| CciI | TCATGA | 2 cut(s) | 3414, 4078 |
| CfoI | GCGC | 5 cut(s) | 2697, 3786, 3788, 4661, 5498 |
| Cfr13I | GGNCC | 7 cut(s) | 279, 611, 910, 1433, 2742, 3073, 5384 |
| Cfr9I | CCCGGG | 1 cut(s) | 2739 |
| ClaI | ATCGAT | 2 cut(s) | 943, 2658 |
| CseI | GACGC | 7 cut(s) | 216, 425, 1066, 2380, 2634, 3692, 4501 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 1301, 1336, 2206, 2241 |
| DraI | TTTAAA | 2 cut(s) | 2352, 4473 |
| DraIII | CACNNNGTG | 1 cut(s) | 3407 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 4793 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 4793 |
| EaeI | YGGCCR | 1 cut(s) | 550 |
| Eam1104I | CTCTTC | 8 cut(s) | 25, 802, 1164, 1474, 2146, 3640, 4735, 5579 |
| EarI | CTCTTC | 8 cut(s) | 25, 802, 1164, 1474, 2146, 3640, 4735, 5579 |
| Eco130I | CCWWGG | 2 cut(s) | 1618, 3159 |
| Eco47I | GGWCC | 5 cut(s) | 279, 611, 910, 3073, 5384 |
| Eco57I | CTGAAG | 2 cut(s) | 682, 1119 |
| Eco81I | CCTNAGG | 1 cut(s) | 2704 |
| Eco88I | CYCGRG | 3 cut(s) | 576, 2739, 3671 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1098 |
| EcoO109I | RGGNCCY | 1 cut(s) | 279 |
| EcoRI | GAATTC | 6 cut(s) | 567, 2196, 2537, 3542, 4362, 4965 |
| EcoT14I | CCWWGG | 2 cut(s) | 1618, 3159 |
| EcoT22I | ATGCAT | 5 cut(s) | 925, 1257, 1458, 1669, 3624 |
| ErhI | CCWWGG | 2 cut(s) | 1618, 3159 |
| Esp3I | CGTCTC | 1 cut(s) | 3679 |
| FalI | AAGNNNNNCTT | 3 cut(s) | 36, 4414, 4446 |
| FaqI | GGGAC | 5 cut(s) | 1588, 1932, 2434, 4533, 5517 |
| FauNDI | CATATG | 2 cut(s) | 906, 3069 |
| FblI | GTMKAC | 1 cut(s) | 5297 |
| Fnu4HI | GCNGC | 8 cut(s) | 1500, 1843, 3831, 4009, 4288, 5466, 5469, 5535 |
| Fsp4HI | GCNGC | 8 cut(s) | 1500, 1843, 3831, 4009, 4288, 5466, 5469, 5535 |
| GlaI | GCGC | 5 cut(s) | 2696, 3785, 3787, 4660, 5497 |
| GluI | GCNGC | 8 cut(s) | 1500, 1843, 3831, 4009, 4288, 5466, 5469, 5535 |
| HaeIII | GGCC | 7 cut(s) | 552, 1434, 1917, 2379, 2744, 4417, 4890 |
| HapII | CCGG | 5 cut(s) | 164, 235, 1143, 1699, 2740 |
| HgaI | GACGC | 7 cut(s) | 216, 425, 1066, 2380, 2634, 3692, 4501 |
| HhaI | GCGC | 5 cut(s) | 2697, 3786, 3788, 4661, 5498 |
| Hin1I | GRCGYC | 2 cut(s) | 3703, 4161 |
| Hin6I | GCGC | 5 cut(s) | 2695, 3784, 3786, 4659, 5496 |
| HinP1I | GCGC | 5 cut(s) | 2695, 3784, 3786, 4659, 5496 |
| HincII | GTYRAC | 2 cut(s) | 1933, 3720 |
| HindII | GTYRAC | 2 cut(s) | 1933, 3720 |
| HindIII | AAGCTT | 2 cut(s) | 521, 3510 |
| HpaII | CCGG | 5 cut(s) | 164, 235, 1143, 1699, 2740 |
| HphI | GGTGA | 6 cut(s) | 100, 412, 527, 1462, 4888, 5360 |
| Hpy166II | GTNNAC | 7 cut(s) | 1021, 1933, 3720, 4198, 4820, 5298, 5566 |
| Hpy8I | GTNNAC | 7 cut(s) | 1021, 1933, 3720, 4198, 4820, 5298, 5566 |
| HpyAV | CCTTC | 8 cut(s) | 406, 704, 830, 1094, 1976, 2432, 2867, 4956 |
| HpyCH4IV | ACGT | 8 cut(s) | 315, 1519, 3207, 3688, 4161, 4651, 5044, 5294 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 929, 2333, 2407, 3628, 3676, 3836, 4094, 4261, 5521 |
| HpySE526I | ACGT | 8 cut(s) | 315, 1519, 3207, 3688, 4161, 4651, 5044, 5294 |
| Hsp92I | GRCGYC | 2 cut(s) | 3703, 4161 |
| HspAI | GCGC | 5 cut(s) | 2695, 3784, 3786, 4659, 5496 |
| KpnI | GGTACC | 1 cut(s) | 5621 |
| LguI | GCTCTTC | 2 cut(s) | 1164, 5579 |
| LmnI | GCTCC | 8 cut(s) | 20, 789, 1507, 2073, 3220, 3676, 4326, 5462 |
| Lsp1109I | GCAGC | 7 cut(s) | 1511, 1854, 3817, 4020, 4274, 5477, 5480 |
| MaeII | ACGT | 8 cut(s) | 315, 1519, 3207, 3688, 4161, 4651, 5044, 5294 |
| MfeI | CAATTG | 4 cut(s) | 498, 1428, 2778, 3594 |
| MflI | RGATCY | 6 cut(s) | 319, 436, 1890, 3163, 3890, 5597 |
| MhlI | GDGCHC | 1 cut(s) | 1023 |
| MlsI | TGGCCA | 1 cut(s) | 552 |
| MluI | ACGCGT | 2 cut(s) | 95, 225 |
| MluNI | TGGCCA | 1 cut(s) | 552 |
| MlyI | GAGTC | 8 cut(s) | 376, 1538, 1632, 2177, 3303, 3434, 3825, 5499 |
| MmeI | TCCRAC | 4 cut(s) | 1336, 1745, 2707, 3478 |
| Mox20I | TGGCCA | 1 cut(s) | 552 |
| Mph1103I | ATGCAT | 5 cut(s) | 925, 1257, 1458, 1669, 3624 |
| MroXI | GAANNNNTTC | 4 cut(s) | 1233, 1737, 2734, 3630 |
| MscI | TGGCCA | 1 cut(s) | 552 |
| MslI | CAYNNNNRTG | 9 cut(s) | 45, 1911, 2084, 2150, 2555, 2795, 4077, 4229, 4678 |
| Msp20I | TGGCCA | 1 cut(s) | 552 |
| MspA1I | CMGCKG | 2 cut(s) | 4097, 5537 |
| MspCI | CTTAAG | 1 cut(s) | 2275 |
| MspI | CCGG | 5 cut(s) | 164, 235, 1143, 1699, 2740 |
| MunI | CAATTG | 4 cut(s) | 498, 1428, 2778, 3594 |
| Mva1269I | GAATGC | 3 cut(s) | 2790, 3849, 5517 |
| MvnI | CGCG | 5 cut(s) | 97, 227, 1109, 3786, 4497 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 929, 2333, 2407, 3628, 3676, 3836, 4094, 4261, 5521 |
| NciI | CCSGG | 5 cut(s) | 165, 235, 1144, 2740, 2741 |
| NdeI | CATATG | 2 cut(s) | 906, 3069 |
| NheI | GCTAGC | 2 cut(s) | 830, 2327 |
| NmeAIII | GCCGAG | 1 cut(s) | 4687 |
| NmuCI | GTSAC | 4 cut(s) | 515, 3589, 4647, 5045 |
| NsiI | ATGCAT | 5 cut(s) | 925, 1257, 1458, 1669, 3624 |
| NspI | RCATGY | 8 cut(s) | 635, 683, 1076, 1609, 2566, 3086, 3239, 3489 |
| NspV | TTCGAA | 3 cut(s) | 708, 2535, 3427 |
| PaeI | GCATGC | 3 cut(s) | 1076, 2566, 3239 |
| PaeR7I | CTCGAG | 1 cut(s) | 576 |
| PagI | TCATGA | 2 cut(s) | 3414, 4078 |
| PauI | GCGCGC | 1 cut(s) | 3784 |
| PciI | ACATGT | 2 cut(s) | 631, 679 |
| PciSI | GCTCTTC | 2 cut(s) | 1164, 5579 |
| PctI | GAATGC | 3 cut(s) | 2790, 3849, 5517 |
| PdmI | GAANNNNTTC | 4 cut(s) | 1233, 1737, 2734, 3630 |
| PflFI | GACNNNGTC | 1 cut(s) | 3815 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2375 |
| PfoI | TCCNGGA | 2 cut(s) | 2635, 3115 |
| PkrI | GCNGC | 8 cut(s) | 1501, 1844, 3832, 4010, 4289, 5467, 5470, 5536 |
| PleI | GAGTC | 8 cut(s) | 376, 1538, 1631, 2176, 3303, 3434, 3824, 5499 |
| PpsI | GAGTC | 8 cut(s) | 376, 1538, 1631, 2176, 3303, 3434, 3824, 5499 |
| PpuMI | RGGWCCY | 1 cut(s) | 279 |
| PscI | ACATGT | 2 cut(s) | 631, 679 |
| PshBI | ATTAAT | 2 cut(s) | 591, 2754 |
| PsiI | TTATAA | 3 cut(s) | 1400, 2850, 4277 |
| Psp5II | RGGWCCY | 1 cut(s) | 279 |
| PspPI | GGNCC | 7 cut(s) | 279, 611, 910, 1433, 2742, 3073, 5384 |
| PspPPI | RGGWCCY | 1 cut(s) | 279 |
| PspXI | VCTCGAGB | 1 cut(s) | 576 |
| PsrI | GAACNNNNNNTAC | 4 cut(s) | 53, 85, 3497, 3529 |
| PsuI | RGATCY | 6 cut(s) | 319, 436, 1890, 3163, 3890, 5597 |
| PsyI | GACNNNGTC | 1 cut(s) | 3815 |
| PteI | GCGCGC | 1 cut(s) | 3784 |
| RseI | CAYNNNNRTG | 9 cut(s) | 45, 1911, 2084, 2150, 2555, 2795, 4077, 4229, 4678 |
| SapI | GCTCTTC | 2 cut(s) | 1164, 5579 |
| SatI | GCNGC | 8 cut(s) | 1500, 1843, 3831, 4009, 4288, 5466, 5469, 5535 |
| Sau96I | GGNCC | 7 cut(s) | 279, 611, 910, 1433, 2742, 3073, 5384 |
| ScaI | AGTACT | 3 cut(s) | 3726, 4444, 5476 |
| SchI | GAGTC | 8 cut(s) | 376, 1538, 1632, 2177, 3303, 3434, 3825, 5499 |
| SduI | GDGCHC | 1 cut(s) | 1023 |
| SfcI | CTRYAG | 2 cut(s) | 1743, 3909 |
| Sfr274I | CTCGAG | 1 cut(s) | 576 |
| SfuI | TTCGAA | 3 cut(s) | 708, 2535, 3427 |
| SinI | GGWCC | 5 cut(s) | 279, 611, 910, 3073, 5384 |
| SlaI | CTCGAG | 1 cut(s) | 576 |
| SmaI | CCCGGG | 1 cut(s) | 2741 |
| SmiMI | CAYNNNNRTG | 9 cut(s) | 45, 1911, 2084, 2150, 2555, 2795, 4077, 4229, 4678 |
| SpeI | ACTAGT | 1 cut(s) | 2026 |
| SphI | GCATGC | 3 cut(s) | 1076, 2566, 3239 |
| SsiI | CCGC | 6 cut(s) | 126, 1109, 4095, 4497, 5515, 5535 |
| SspI | AATATT | 1 cut(s) | 733 |
| StyI | CCWWGG | 2 cut(s) | 1618, 3159 |
| TaiI | ACGT | 8 cut(s) | 318, 1522, 3210, 3691, 4164, 4654, 5047, 5297 |
| TatI | WGTACW | 8 cut(s) | 1279, 3724, 3877, 4002, 4442, 5228, 5269, 5474 |
| TauI | GCSGC | 1 cut(s) | 5537 |
| TscAI | CASTG | 9 cut(s) | 1142, 1357, 2305, 2679, 3001, 3307, 5118, 5421, 5573 |
| TseFI | GTSAC | 4 cut(s) | 515, 3589, 4647, 5045 |
| TseI | GCWGC | 7 cut(s) | 1499, 1842, 3830, 4008, 4287, 5465, 5468 |
| Tsp45I | GTSAC | 4 cut(s) | 515, 3589, 4647, 5045 |
| TspGWI | ACGGA | 4 cut(s) | 472, 1878, 4044, 5325 |
| TspMI | CCCGGG | 1 cut(s) | 2739 |
| TspRI | CASTG | 9 cut(s) | 1142, 1357, 2305, 2679, 3001, 3307, 5118, 5421, 5573 |
| Tth111I | GACNNNGTC | 1 cut(s) | 3815 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2375 |
| Vha464I | CTTAAG | 1 cut(s) | 2275 |
| VneI | GTGCAC | 1 cut(s) | 1019 |
| VpaK11BI | GGWCC | 5 cut(s) | 279, 611, 910, 3073, 5384 |
| VspI | ATTAAT | 2 cut(s) | 591, 2754 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1098 |
| XbaI | TCTAGA | 1 cut(s) | 4120 |
| XceI | RCATGY | 8 cut(s) | 635, 683, 1076, 1609, 2566, 3086, 3239, 3489 |
| XcmI | CCANNNNNNNNNTGG | 5 cut(s) | 560, 1444, 2014, 3515, 3554 |
| XhoI | CTCGAG | 1 cut(s) | 576 |
| XmaI | CCCGGG | 1 cut(s) | 2739 |
| XmiI | GTMKAC | 1 cut(s) | 5297 |
| XmnI | GAANNNNTTC | 4 cut(s) | 1233, 1737, 2734, 3630 |
| ZraI | GACGTC | 1 cut(s) | 4162 |
| ZrmI | AGTACT | 3 cut(s) | 3726, 4444, 5476 |
| Zsp2I | ATGCAT | 5 cut(s) | 925, 1257, 1458, 1669, 3624 |