RchiOBHm_Chr3g0487331

TMV resistance protein N-like

Basic Information

Type: gene
Biological Identity
rosa_chinensis
3
Physical Location & Seq
Forward (+)
34535277 .. 34537170
1894 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ45176

Sequence Viewer

Length: 1098 bp
ATGGCTACTTCTTCCTCCTTTTACCGGTATCATGCTTTCTTGAGTTTCAGAGGGGCAGATACCCGCAAGGCCTTTACTGATCATCTCTATAGTGCCTTGCAGCGGGCGGGAATCCACTCATTTAGAGATGATGATGAGATTGTGAGAGGAACGAATATCGCACAAGAACTACAGAAAGCAATACGCGAGTCACCTATTTCCATCATTGTCTTCTCCAAAAGTTACGCTTGCTCACGTTGGTGCTTGAATGAACTTGCGAGGATAATGGAACAAAAAAATAGTAAGGGACACCTCGTTTTGCCGGTCTTCTATGATGTGGATCCTTCGGAAGTGAGGAAGCAGAGTGGGAGTTTTGCAGAAGCATTTGCCAAACATGTAGTAGAGCAAAAGATGGACAAGGTGGAGGAGTGGCAGAAAGCGCTTAACGATGTTGCAGATCTCGGGGGGATGGTTTTAGGAGATCAGTATGAATCGCAGTTCATCCAAAGTATTGTTGAGGAGATTGGAAAAATGCTTGATCACACAGCATTAAGCGTTGCTTCAGGTGGTGTTGGAATCCCTTATCGTGTACGACACCTAAACATGTGGTTGAAAGATGGATCAAATGATGTTGATGTAGCTTTGTTATGTGGAGAAGGTGGAATTGGAAAAACTACTGTTGCTCGAGTTGCTTATAATCTCAACTTTTACAGATTTCAAGGTAGCAGCTTCCTTGAAGATATTCGTGCAACATATGAACAATCCGATGGTATTCTTCAGCTGCAAAGAAAACTTGTTTTGGATATCCAAAGGGGTAATGAAACAAAGACTACATACATCAGCACAGAAGAGGGAAGAAGCAAGATCAAGCACATCGTATGTTGCAAAAGAGTTCTGATTGTTTTTGATGATGTGAAACACTTGAACCAGTTGAACGCAATTCTTGGCAATCGGGATTGGTGCTATCCAGGAAGTAAAATTATCATTACTACTAGAAATAAACATTTGTTAGAAGCTCAAGAGATTCCTCATACCGTATTTGAAATTGAACTACTTGACAAGTATGAAGGAATGGAGATTTTCAATAGCCATGCATTTGGAGAAGCACATCCTATCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

365

Amino Acids

41.38

Weight (kDa)

6.24

Isoelectric Point (pI)

40.55

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TIR PF01582 10 - 178 5.8e-52 TIR domain
TIR_2 PF13676 13 - 108 1.1e-17 TIR domain
NB-ARC PF00931 190 - 360 1.2e-17 NB-ARC domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000036)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G57630 AT1G72930 AT5G38344
fragaria_vesca FvH4_1g27020 FvH4_2g00931 FvH4_2g17330 FvH4_2g17330 FvH4_2g17340 FvH4_2g17350 FvH4_2g20690 FvH4_5g15301 FvH4_5g34194 FvH4_5g38530 FvH4_5g38740 FvH4_5g38740 FvH4_5g38740 FvH4_6g03800 FvH4_7g09791 FvH4_7g09800 FvH4_7g09800 FvH4_7g10510 FvH4_7g10520 FvH4_7g10520 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750
malus_domestica MD02G1217100.v1.1 MD02G1217200.v1.1 MD02G1217400.v1.1 MD02G1217600.v1.1 MD02G1264800.v1.1 MD02G1264900.v1.1 MD02G1302100.v1.1 MD04G1010700.v1.1 MD05G1006800.v1.1 MD05G1140100.v1.1 MD05G1140200.v1.1 MD05G1152200.v1.1 MD07G1073500.v1.1 MD07G1101700.v1.1 MD07G1102200.v1.1 MD07G1103200.v1.1 MD07G1112300.v1.1 MD08G1018200.v1.1 MD08G1018400.v1.1 MD08G1018800.v1.1 MD08G1019000.v1.1 MD08G1019100.v1.1 MD08G1019200.v1.1 MD08G1019300.v1.1 MD08G1019400.v1.1 MD08G1019600.v1.1 MD08G1019900.v1.1 MD08G1020000.v1.1 MD08G1020200.v1.1 MD08G1020500.v1.1 MD08G1020700.v1.1 MD08G1020800.v1.1 MD08G1040700.v1.1 MD11G1112400.v1.1 MD12G1068600.v1.1 MD12G1193200.v1.1 MD13G1050600.v1.1 MD15G1374900.v1.1 MD15G1375100.v1.1 MD15G1416500.v1.1 MD17G1072500.v1.1 MD17G1274200.v1.1 MD17G1274900.v1.1
prunus_persica Prupe.2G121000_v2.0.a1 Prupe.2G121000_v2.0.a1 Prupe.2G125800_v2.0.a1 Prupe.2G126000_v2.0.a1 Prupe.2G126100_v2.0.a1 Prupe.2G126200_v2.0.a1 Prupe.2G126300_v2.0.a1 Prupe.2G126400_v2.0.a1 Prupe.2G126500_v2.0.a1 Prupe.2G126600_v2.0.a1 Prupe.2G126700_v2.0.a1 Prupe.2G126700_v2.0.a1 Prupe.2G126800_v2.0.a1 Prupe.2G126900_v2.0.a1 Prupe.2G127000_v2.0.a1 Prupe.2G127000_v2.0.a1 Prupe.2G127000_v2.0.a1 Prupe.2G127000_v2.0.a1 Prupe.2G135500_v2.0.a1 Prupe.2G135600_v2.0.a1 Prupe.2G135700_v2.0.a1 Prupe.2G135700_v2.0.a1 Prupe.3G009800_v2.0.a1 Prupe.3G010200_v2.0.a1 Prupe.3G131000_v2.0.a1 Prupe.4G260800_v2.0.a1 Prupe.4G260900_v2.0.a1 Prupe.6G083100_v2.0.a1 Prupe.6G083200_v2.0.a1 Prupe.6G083400_v2.0.a1 Prupe.6G132100_v2.0.a1 Prupe.8G184900_v2.0.a1 Prupe.8G185200_v2.0.a1 Prupe.8G185300_v2.0.a1
pyrus_communis pycom02g17870 pycom02g17880 pycom02g19520 pycom02g22610 pycom02g22630 pycom02g22680 pycom05g13540 pycom05g14680 pycom07g04880 pycom07g04890 pycom07g05690 pycom07g05710 pycom07g05720 pycom07g05750 pycom07g05780 pycom07g06300 pycom07g08320 pycom07g08330 pycom07g08350 pycom07g08360 pycom07g08370 pycom07g08410 pycom07g08420 pycom07g08430 pycom07g08440 pycom07g08470 pycom07g08480 pycom07g08520 pycom07g08550 pycom07g08560 pycom07g08640 pycom07g08660 pycom07g08670 pycom07g08680 pycom07g08690 pycom07g08720 pycom07g08730 pycom07g08790 pycom07g08800 pycom07g08810 pycom07g08860 pycom07g08890 pycom07g09720 pycom08g01590 pycom08g01600 pycom08g01620 pycom08g01630 pycom08g01640 pycom10g12630 pycom15g16490 pycom17g07200 pycom17g07210 pycom17g07220 pycom17g11730 pycom17g11740 pycom17g27340 pycom17g27380
rosa_chinensis RchiOBHm_Chr1g0342571 RchiOBHm_Chr1g0346231 RchiOBHm_Chr1g0346831 RchiOBHm_Chr1g0346891 RchiOBHm_Chr1g0348311 RchiOBHm_Chr1g0348321 RchiOBHm_Chr1g0348331 RchiOBHm_Chr1g0348361 RchiOBHm_Chr1g0348371 RchiOBHm_Chr1g0348381 RchiOBHm_Chr1g0348401 RchiOBHm_Chr1g0348411 RchiOBHm_Chr1g0348421 RchiOBHm_Chr1g0348431 RchiOBHm_Chr2g0130881 RchiOBHm_Chr3g0487331 RchiOBHm_Chr5g0060371 RchiOBHm_Chr6g0246491 RchiOBHm_Chr6g0246871 RchiOBHm_Chr6g0250311 RchiOBHm_Chr6g0250781 RchiOBHm_Chr6g0251431 RchiOBHm_Chr6g0281871 RchiOBHm_Chr6g0281881 RchiOBHm_Chr6g0281931 RchiOBHm_Chr6g0281941 RchiOBHm_Chr6g0281951 RchiOBHm_Chr6g0281971 RchiOBHm_Chr6g0281981 RchiOBHm_Chr7g0240541 RchiOBHm_Chr7g0240631 RchiOBHm_Chr7g0240671
rosa_laevigata RLG00000000627 RLG00000000631 RLG00000000641 RLG00000000645 RLG00000000652 RLG00000000662 RLG00000000663 RLG00000000667 RLG00000000670 RLG00000000702 RLG00000001216 RLG00000001219 RLG00000007678 RLG00000012923 RLG00000012996 RLG00000013243 RLG00000017513 RLG00000017514 RLG00000020936 RLG00000022755 RLG00000023013 RLG00000028646 RLG00000028654 RLG00000028662 RLG00000028665 RLG00000028667 RLG00000028711 RLG00000028714 RLG00000028716 RLG00000028770 RLG00000028771 RLG00000028773 RLG00000028778 RLG00000028798 RLG00000028809 RLG00000028813 RLG00000029334 RLG00000030003 RLG00000033910 RLG00000034358 RLG00000035430
rosa_multiflora Rmu_co8031134.1_g000001 Rmu_co8092796.1_g000001 Rmu_co8130156.1_g000001 Rmu_co8325323.1_g000001 Rmu_co8424083.1_g000002 Rmu_sc0000008.1_g000003 Rmu_sc0000008.1_g000011 Rmu_sc0000008.1_g000015 Rmu_sc0000008.1_g000020 Rmu_sc0000091.1_g000015 Rmu_sc0000091.1_g000018 Rmu_sc0000091.1_g000029 Rmu_sc0000091.1_g000031 Rmu_sc0000391.1_g000004 Rmu_sc0001070.1_g000030 Rmu_sc0001293.1_g000016 Rmu_sc0001674.1_g000006 Rmu_sc0001731.1_g000002 Rmu_sc0001731.1_g000003 Rmu_sc0001731.1_g000005 Rmu_sc0001911.1_g000029 Rmu_sc0001913.1_g000038 Rmu_sc0001955.1_g000025 Rmu_sc0001992.1_g000022 Rmu_sc0001992.1_g000028 Rmu_sc0001992.1_g000031 Rmu_sc0002517.1_g000013 Rmu_sc0002517.1_g000017 Rmu_sc0002551.1_g000022 Rmu_sc0002551.1_g000029 Rmu_sc0002551.1_g000038 Rmu_sc0002705.1_g000015 Rmu_sc0002705.1_g000016 Rmu_sc0002882.1_g000055 Rmu_sc0003232.1_g000027 Rmu_sc0003363.1_g000037 Rmu_sc0003600.1_g000054 Rmu_sc0003918.1_g000011 Rmu_sc0004395.1_g000011 Rmu_sc0005071.1_g000004 Rmu_sc0005255.1_g000018 Rmu_sc0005327.1_g000004 Rmu_sc0005597.1_g000007 Rmu_sc0007060.1_g000007 Rmu_sc0007310.1_g000003 Rmu_sc0007383.1_g000014 Rmu_sc0007799.1_g000003 Rmu_sc0008477.1_g000016 Rmu_sc0010151.1_g000009 Rmu_sc0011217.1_g000005 Rmu_sc0016269.1_g000006 Rmu_sc0021495.1_g000001 Rmu_sc0027364.1_g000001 Rmu_sc0029432.1_g000001 Rmu_sc0041386.1_g000001 Rmu_ssc0000126.1_g000023 Rmu_ssc0000126.1_g000027
rosa_roxburghii Rroxscaffold_1G00006130 Rroxscaffold_1G00023320 Rroxscaffold_1G00038770 Rroxscaffold_2G00119800 Rroxscaffold_2G00121860 Rroxscaffold_3G00219780 Rroxscaffold_3G00219890 Rroxscaffold_4G00306740 Rroxscaffold_4G00306820 Rroxscaffold_4G00307000 Rroxscaffold_4G00307010 Rroxscaffold_4G00307020 Rroxscaffold_4G00308030 Rroxscaffold_4G00308070 Rroxscaffold_4G00308450 Rroxscaffold_4G00308460 Rroxscaffold_4G00315320 Rroxscaffold_5G00352470 Rroxscaffold_5G00371420 Rroxscaffold_6G00392300 Rroxscaffold_6G00394870 Rroxscaffold_6G00394890 Rroxscaffold_7G00186700 Rroxscaffold_7G00194980 Rroxscaffold_7G00216840
rosa_rugosa Rorug01G0076100 Rorug01G0128100 Rorug01G0149000.1 Rorug01G0149500.1 Rorug01G0180000 Rorug01G0180100 Rorug01G0182900 Rorug01G0184000 Rorug01G0184100 Rorug01G0184300 Rorug01G0184600 Rorug01G0184700 Rorug01G0184700 Rorug01G0184900 Rorug01G0185000 Rorug01G0185100 Rorug01G0189300 Rorug01G0194100 Rorug01G0194100 Rorug01G0194200 Rorug01G0194400 Rorug01G0194400 Rorug01G0194500 Rorug02G0090400 Rorug02G0090400 Rorug03G0233000 Rorug03G0233100 Rorug05G0178600 Rorug05G0178700 Rorug05G0579200 Rorug06G0144100 Rorug06G0144300 Rorug06G0144300 Rorug06G0179300 Rorug06G0208800 Rorug07G0323500 Rorug07G0337000
rosa_samantha Rh1AG046100 Rh1AG201400 Rh1AG201800 Rh1AG202100 Rh1AG202600 Rh1AG211500 Rh1AG211800 Rh1AG212200 Rh1AG212500 Rh1AG212600 Rh1AG214200 Rh1BG168000 Rh1BG168300 Rh1BG168500 Rh1BG177900 Rh1BG178200 Rh1BG178300 Rh1BG178800 Rh1BG178900 Rh1CG080900 Rh1CG183300 Rh1CG186300 Rh1CG186700 Rh1CG187000 Rh1CG187300 Rh1CG193400 Rh1CG195800 Rh1CG196000 Rh1CG196100 Rh1CG196400 Rh1CG196500 Rh1CG196800 Rh1CG198800 Rh1CG442600 Rh1DG086200 Rh1DG155400 Rh1DG156200 Rh1DG194000 Rh1DG194300 Rh1DG194900 Rh1DG197000 Rh1DG198800 Rh1DG199000 Rh1DG199200 Rh1DG202000 Rh1DG203900 Rh1DG207600 Rh1DG207900 Rh1DG208000 Rh1DG208500 Rh1DG208600 Rh1DG208700 Rh3CG339100 Rh5AG106500 Rh5AG264800 Rh5AG265300 Rh5CG302800 Rh5DG277900 Rh6AG257600 Rh6AG257700 Rh6BG260500 Rh6BG260700 Rh6CG259600 Rh6CG259700 Rh6DG252100 Rh7DG126900
rosa_wichuraiana Rw0G005780 Rw0G007540 Rw0G007550 Rw0G007560 Rw0G009390 Rw1G016900 Rw1G016930 Rw1G016940 Rw1G016970 Rw1G017860 Rw1G017890 Rw1G017900 Rw1G017910 Rw1G017920 Rw1G017960 Rw1G017970 Rw1G017980 Rw1G018150 Rw4G000830 Rw5G009290 Rw5G018950 Rw5G024850 Rw5G024870 Rw5G040460 Rw6G022290 Rw7G041020 Rw7G041200 Rw7G041360 Rw7G041450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 675
AccII CGCG 1 cut(s) 186
AciI CCGC 3 cut(s) 64, 103, 107
AclWI GGATC 3 cut(s) 314, 327, 607
AcuI CTGAAG 2 cut(s) 525, 740
AfaI GTAC 1 cut(s) 570
AfeI AGCGCT 1 cut(s) 420
AfiI CCNNNNNNNGG 2 cut(s) 24, 102
AflIII ACRYGT 2 cut(s) 373, 582
AgeI ACCGGT 1 cut(s) 24
AgsI TTSAA 9 cut(s) 247, 592, 698, 716, 904, 913, 1022, 1028, 1063
AjnI CCWGG 1 cut(s) 946
AjuI GAANNNNNNNTTGG 2 cut(s) 627, 659
AleI CACNNNNGTG 1 cut(s) 238
AluBI AGCT 4 cut(s) 620, 708, 760, 995
AluI AGCT 4 cut(s) 620, 708, 760, 995
AlwI GGATC 3 cut(s) 314, 327, 607
Ama87I CYCGRG 2 cut(s) 440, 663
Aor51HI AGCGCT 1 cut(s) 420
AoxI GGCC 1 cut(s) 69
ApeKI GCWGC 3 cut(s) 100, 705, 760
AsiGI ACCGGT 1 cut(s) 24
Asp700I GAANNNNTTC 1 cut(s) 720
AspLEI GCGC 1 cut(s) 421
AsuHPI GGTGA 1 cut(s) 183
AvaI CYCGRG 2 cut(s) 440, 663
BamHI GGATCC 1 cut(s) 319
BbsI GAAGAC 2 cut(s) 202, 298
BbvI GCAGC 3 cut(s) 112, 717, 747
BccI CCATC 5 cut(s) 209, 385, 442, 590, 740
BciT130I CCWGG 1 cut(s) 948
BclI TGATCA 2 cut(s) 79, 517
BfaI CTAG 1 cut(s) 972
BfmI CTRYAG 2 cut(s) 88, 170
BfoI RGCGCY 1 cut(s) 422
BglII AGATCT 1 cut(s) 436
BisI GCNGC 3 cut(s) 101, 706, 761
BlsI GCNGC 3 cut(s) 102, 707, 762
Bme1390I CCNGG 1 cut(s) 948
BmeT110I CYCGRG 2 cut(s) 440, 663
BmiI GGNNCC 1 cut(s) 321
BmrFI CCNGG 1 cut(s) 948
BpiI GAAGAC 2 cut(s) 202, 298
BpuEI CTTGAG 2 cut(s) 61, 981
BsaBI GATNNNNATC 1 cut(s) 318
BsaWI WCCGGW 1 cut(s) 24
Bsc4I CCNNNNNNNGG 2 cut(s) 24, 102
Bse118I RCCGGY 2 cut(s) 24, 301
Bse1I ACTGG 1 cut(s) 907
Bse8I GATNNNNATC 1 cut(s) 318
BseBI CCWGG 1 cut(s) 948
BseGI GGATG 3 cut(s) 453, 480, 1087
BseJI GATNNNNATC 1 cut(s) 318
BseLI CCNNNNNNNGG 2 cut(s) 24, 102
BseNI ACTGG 1 cut(s) 907
BseRI GAGGAG 2 cut(s) 419, 512
BseXI GCAGC 3 cut(s) 112, 717, 747
Bsh1236I CGCG 1 cut(s) 186
BshFI GGCC 1 cut(s) 71
BshTI ACCGGT 1 cut(s) 24
BsiHKCI CYCGRG 2 cut(s) 440, 663
BsiSI CCGG 2 cut(s) 25, 302
BslFI GGGAC 1 cut(s) 300
BslI CCNNNNNNNGG 2 cut(s) 24, 102
BsmFI GGGAC 1 cut(s) 300
BsnI GGCC 1 cut(s) 71
BsoBI CYCGRG 2 cut(s) 440, 663
Bsp143I GATC 7 cut(s) 79, 319, 436, 460, 517, 599, 843
BspACI CCGC 3 cut(s) 64, 103, 107
BspANI GGCC 1 cut(s) 71
BspFNI CGCG 1 cut(s) 186
BspLI GGNNCC 1 cut(s) 321
BspPI GGATC 3 cut(s) 314, 327, 607
BsrFI RCCGGY 2 cut(s) 24, 301
BsrI ACTGG 1 cut(s) 907
BssAI RCCGGY 2 cut(s) 24, 301
BssMI GATC 7 cut(s) 79, 319, 436, 460, 517, 599, 843
Bst2UI CCWGG 1 cut(s) 948
Bst4CI ACNGT 2 cut(s) 658, 1015
Bst6I CTCTTC 1 cut(s) 822
BstC8I GCNNGC 2 cut(s) 105, 229
BstF5I GGATG 3 cut(s) 453, 480, 1087
BstFNI CGCG 1 cut(s) 186
BstH2I RGCGCY 1 cut(s) 422
BstHHI GCGC 1 cut(s) 421
BstKTI GATC 7 cut(s) 82, 322, 439, 463, 520, 602, 846
BstMBI GATC 7 cut(s) 79, 319, 436, 460, 517, 599, 843
BstMWI GCNNNNNNNGC 2 cut(s) 418, 668
BstNI CCWGG 1 cut(s) 948
BstNSI RCATGY 2 cut(s) 377, 586
BstSCI CCNGG 1 cut(s) 946
BstSFI CTRYAG 2 cut(s) 88, 170
BstUI CGCG 1 cut(s) 186
BstV1I GCAGC 3 cut(s) 112, 717, 747
BstV2I GAAGAC 2 cut(s) 202, 298
BstX2I RGATCY 2 cut(s) 319, 436
BstXI CCANNNNNNTGG 1 cut(s) 1076
BstYI RGATCY 2 cut(s) 319, 436
BsuRI GGCC 1 cut(s) 71
BtsCI GGATG 3 cut(s) 453, 480, 1087
Cac8I GCNNGC 2 cut(s) 105, 229
CfoI GCGC 1 cut(s) 421
Cfr10I RCCGGY 2 cut(s) 24, 301
Csp6I GTAC 1 cut(s) 569
CspAI ACCGGT 1 cut(s) 24
CviAII CATG 4 cut(s) 32, 374, 583, 1070
CviJI RGCY 7 cut(s) 5, 71, 620, 708, 760, 995, 1068
CviKI_1 RGCY 7 cut(s) 5, 71, 620, 708, 760, 995, 1068
CviQI GTAC 1 cut(s) 569
DpnI GATC 7 cut(s) 81, 321, 438, 462, 519, 601, 845
DpnII GATC 7 cut(s) 79, 319, 436, 460, 517, 599, 843
Eam1104I CTCTTC 1 cut(s) 822
EarI CTCTTC 1 cut(s) 822
Eco147I AGGCCT 1 cut(s) 71
Eco32I GATATC 1 cut(s) 784
Eco47III AGCGCT 1 cut(s) 420
Eco57I CTGAAG 2 cut(s) 525, 740
Eco88I CYCGRG 2 cut(s) 440, 663
EcoRII CCWGG 1 cut(s) 946
EcoRV GATATC 1 cut(s) 784
EcoT22I ATGCAT 1 cut(s) 1075
FaeI CATG 4 cut(s) 35, 377, 586, 1073
FalI AAGNNNNNCTT 4 cut(s) 211, 243, 523, 555
FaqI GGGAC 1 cut(s) 300
FatI CATG 4 cut(s) 31, 373, 582, 1069
FauI CCCGC 3 cut(s) 71, 96, 100
FauNDI CATATG 1 cut(s) 733
FbaI TGATCA 2 cut(s) 79, 517
Fnu4HI GCNGC 3 cut(s) 101, 706, 761
FokI GGATG 3 cut(s) 460, 467, 1074
Fsp4HI GCNGC 3 cut(s) 101, 706, 761
FspBI CTAG 1 cut(s) 972
GlaI GCGC 1 cut(s) 420
GluI GCNGC 3 cut(s) 101, 706, 761
HaeII RGCGCY 1 cut(s) 422
HaeIII GGCC 1 cut(s) 71
HapII CCGG 2 cut(s) 25, 302
HhaI GCGC 1 cut(s) 421
Hin1II CATG 4 cut(s) 35, 377, 586, 1073
Hin6I GCGC 1 cut(s) 419
HinP1I GCGC 1 cut(s) 419
HinfI GANTC 5 cut(s) 111, 188, 470, 555, 1003
HpaII CCGG 2 cut(s) 25, 302
HphI GGTGA 1 cut(s) 183
Hpy166II GTNNAC 1 cut(s) 569
Hpy188I TCNGA 4 cut(s) 50, 328, 745, 876
Hpy188III TCNNGA 3 cut(s) 40, 932, 998
Hpy8I GTNNAC 1 cut(s) 569
HpyAV CCTTC 3 cut(s) 333, 629, 1040
HpyCH4III ACNGT 2 cut(s) 658, 1015
HpyCH4IV ACGT 1 cut(s) 235
HpyCH4V TGCA 7 cut(s) 100, 356, 434, 728, 763, 864, 1073
HpyF10VI GCNNNNNNNGC 2 cut(s) 418, 668
HpySE526I ACGT 1 cut(s) 235
Hsp92II CATG 4 cut(s) 35, 377, 586, 1073
HspAI GCGC 1 cut(s) 419
Ksp22I TGATCA 2 cut(s) 79, 517
Kzo9I GATC 7 cut(s) 79, 319, 436, 460, 517, 599, 843
LpnPI CCDG 6 cut(s) 38, 315, 528, 920, 933, 960
Lsp1109I GCAGC 3 cut(s) 112, 717, 747
MaeI CTAG 1 cut(s) 972
MaeII ACGT 1 cut(s) 235
MaeIII GTNAC 2 cut(s) 189, 221
MalI GATC 7 cut(s) 81, 321, 438, 462, 519, 601, 845
MboI GATC 7 cut(s) 79, 319, 436, 460, 517, 599, 843
MboII GAAGA 7 cut(s) 3, 202, 298, 728, 746, 839, 846
MflI RGATCY 2 cut(s) 319, 436
MluCI AATT 4 cut(s) 642, 918, 957, 1023
MlyI GAGTC 1 cut(s) 197
MmeI TCCRAC 1 cut(s) 532
Mph1103I ATGCAT 1 cut(s) 1075
MroXI GAANNNNTTC 1 cut(s) 720
MseI TTAA 2 cut(s) 423, 530
MslI CAYNNNNRTG 1 cut(s) 238
MspA1I CMGCKG 2 cut(s) 103, 760
MspI CCGG 2 cut(s) 25, 302
MspR9I CCNGG 1 cut(s) 948
MvaI CCWGG 1 cut(s) 948
MvnI CGCG 1 cut(s) 186
MwoI GCNNNNNNNGC 2 cut(s) 418, 668
NdeI CATATG 1 cut(s) 733
NdeII GATC 7 cut(s) 79, 319, 436, 460, 517, 599, 843
NlaIII CATG 4 cut(s) 35, 377, 586, 1073
NlaIV GGNNCC 1 cut(s) 321
NmuCI GTSAC 1 cut(s) 189
NsiI ATGCAT 1 cut(s) 1075
NspI RCATGY 2 cut(s) 377, 586
OliI CACNNNNGTG 1 cut(s) 238
PaeR7I CTCGAG 1 cut(s) 663
PceI AGGCCT 1 cut(s) 71
PciI ACATGT 2 cut(s) 373, 582
PdmI GAANNNNTTC 1 cut(s) 720
PfeI GAWTC 4 cut(s) 111, 470, 555, 1003
PfoI TCCNGGA 1 cut(s) 946
PinAI ACCGGT 1 cut(s) 24
PkrI GCNGC 3 cut(s) 102, 707, 762
PleI GAGTC 1 cut(s) 196
PpsI GAGTC 1 cut(s) 196
PscI ACATGT 2 cut(s) 373, 582
PsiI TTATAA 1 cut(s) 675
Psp6I CCWGG 1 cut(s) 946
PspGI CCWGG 1 cut(s) 946
PspN4I GGNNCC 1 cut(s) 321
PspXI VCTCGAGB 1 cut(s) 663
PsuI RGATCY 2 cut(s) 319, 436
PvuII CAGCTG 1 cut(s) 760
RsaI GTAC 1 cut(s) 570
RsaNI GTAC 1 cut(s) 569
RseI CAYNNNNRTG 1 cut(s) 238
SaqAI TTAA 2 cut(s) 423, 530
SatI GCNGC 3 cut(s) 101, 706, 761
Sau3AI GATC 7 cut(s) 79, 319, 436, 460, 517, 599, 843
SchI GAGTC 1 cut(s) 197
ScrFI CCNGG 1 cut(s) 948
SfcI CTRYAG 2 cut(s) 88, 170
Sfr274I CTCGAG 1 cut(s) 663
SlaI CTCGAG 1 cut(s) 663
SmiMI CAYNNNNRTG 1 cut(s) 238
SmlI CTYRAG 3 cut(s) 40, 663, 996
SmoI CTYRAG 3 cut(s) 40, 663, 996
Sse9I AATT 4 cut(s) 642, 918, 957, 1023
SseBI AGGCCT 1 cut(s) 71
SsiI CCGC 3 cut(s) 64, 103, 107
SspMI CTAG 1 cut(s) 972
StuI AGGCCT 1 cut(s) 71
StyD4I CCNGG 1 cut(s) 946
TaaI ACNGT 2 cut(s) 658, 1015
TaiI ACGT 1 cut(s) 238
TaqI TCGA 1 cut(s) 664
TasI AATT 4 cut(s) 642, 918, 957, 1023
TfiI GAWTC 4 cut(s) 111, 470, 555, 1003
Tru1I TTAA 2 cut(s) 423, 530
Tru9I TTAA 2 cut(s) 423, 530
TseFI GTSAC 1 cut(s) 189
TseI GCWGC 3 cut(s) 100, 705, 760
Tsp45I GTSAC 1 cut(s) 189
TspDTI ATGAA 6 cut(s) 264, 469, 483, 750, 813, 1059
XceI RCATGY 2 cut(s) 377, 586
XhoI CTCGAG 1 cut(s) 663
XmnI GAANNNNTTC 1 cut(s) 720
XspI CTAG 1 cut(s) 972
Zsp2I ATGCAT 1 cut(s) 1075
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.