Rh1BG178900

TMV resistance protein N-like

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1B
Physical Location & Seq
Forward (+)
28586626 .. 28588708
2083 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1BG178900.1

Sequence Viewer

Length: 1410 bp
ATGGAAACTCTTAAAGTGTTTGAAGCATTTGGAGTTCCAATAGATCAGCTAATCACTATTGCTGGGCAGGTATATTCACGGCCAAGATTAAGTGTAGATGGTCTTTGGGGTTCCTTTTCTGGCTCTATTGTTGAGTTAAATCTTGGAAGCTGCAATATTTCTGATGATGATTTTCCTAGTGATTTTGGTAACTTATCTTCATTGGAGAGTTTGGATCTCAGCTACAATAAATTTTGTACCTTGCCAGATTCAATCAGAGGCCTTTCTAGACTCAGGACGCTTAATGTTGAATCCTGTAGAAGTCTAACATCAATTACAAGTCTACCACGAATAAGAGATCTACTGAGCACAGACCATTGTGTGTCCTTGGAAATAATAACATTTCAATCACTTTCGTGCATACCAAAGAGAATATCCATATATGGTGACTCGAAACTAGTTGAGATTCAGCACTGGTACAAGTTAAAACCCATTGGAACAGTTGACATAGAAATGATCAGGCTTTTGGGTTTGTCCAACTTGGAATCCATGGAACACATTACAATGCACACCCCATATGCAGACTCCCCGTCGGAAGGGGAATCCATTCGCATCCAGGGACTGCATGAATATGGTATCTTCAGCACATTCTTTCCAGGAAACGGAAATGAGGTTCCAGGACAGTTCTGCCATACAAGTAAAGGGTGTTCCTCAATATCTTTTCCTGTGCCTATACTTCTTAATCACAAGATCGGAGGCTTCAACATATATTCTGTGTATGCATGGACGACAAATGTTACTACTCTATTGCCACCATTAATCATTGAAGTCAATAATAAGACCACGAGTCTGAAATGGATTTATGTGCCGTCATGTTACGGCATTCCAAGTGATGGAAAAGATATGATATGGCTAAGCCATTGGAGTTTGGGGAACCAATTCAAAGGTGGTGATGTAGTCACTGTCTCAATATTTACGCCAGATAACTGGCTTCAGGTAAAAGAGTTCGGTGTCCAAGTGGTGCATGAGGAAGAAGAGAAGATGAGTAAGCAACAGTACAGCAGCAGTGGTAGAGATCCTAGTTATGATGATCCCGATGCTTGTGGTGTTAATGAGGTGATTGGTAATAGTGGTGGAGATTTGTCAGAGTTATATCACGTCAGGCCAGGGACATACTTCCTCTGCGGTGGACCCTTTTTGGAAAATAATAGATACACATATAACAGATGGAAAAACGATCGTTGCCTTAGTGGCATCATAGGAGAGTATGATGAAGAAACGGACAAAGAAGAAAGGAAACAGGGGGATAGGACACTAGCAGCAACAGAAGAAGCTGAAGCAGAAAGAGGCAGCAATAAATTCTTCTGTTGCAAGAACCTTGTTATCCATGCGCTTATGTCATTGGTTGAGATTTGTCAAAATATCTGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

469

Amino Acids

52.43

Weight (kDa)

4.99

Isoelectric Point (pI)

47.31

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_8 PF13855 45 - 100 2.6e-08 Leucine rich repeat
LRR_13 PF23286 45 - 127 4.2e-06 Disease resistance protein RPS4B-like, leucine-rich repeats
LRR_14 PF23598 48 - 114 4.5e-06 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000036)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G57630 AT1G72930 AT5G38344
fragaria_vesca FvH4_1g27020 FvH4_2g00931 FvH4_2g17330 FvH4_2g17330 FvH4_2g17340 FvH4_2g17350 FvH4_2g20690 FvH4_5g15301 FvH4_5g34194 FvH4_5g38530 FvH4_5g38740 FvH4_5g38740 FvH4_5g38740 FvH4_6g03800 FvH4_7g09791 FvH4_7g09800 FvH4_7g09800 FvH4_7g10510 FvH4_7g10520 FvH4_7g10520 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750
malus_domestica MD02G1217100.v1.1 MD02G1217200.v1.1 MD02G1217400.v1.1 MD02G1217600.v1.1 MD02G1264800.v1.1 MD02G1264900.v1.1 MD02G1302100.v1.1 MD04G1010700.v1.1 MD05G1006800.v1.1 MD05G1140100.v1.1 MD05G1140200.v1.1 MD05G1152200.v1.1 MD07G1073500.v1.1 MD07G1101700.v1.1 MD07G1102200.v1.1 MD07G1103200.v1.1 MD07G1112300.v1.1 MD08G1018200.v1.1 MD08G1018400.v1.1 MD08G1018800.v1.1 MD08G1019000.v1.1 MD08G1019100.v1.1 MD08G1019200.v1.1 MD08G1019300.v1.1 MD08G1019400.v1.1 MD08G1019600.v1.1 MD08G1019900.v1.1 MD08G1020000.v1.1 MD08G1020200.v1.1 MD08G1020500.v1.1 MD08G1020700.v1.1 MD08G1020800.v1.1 MD08G1040700.v1.1 MD11G1112400.v1.1 MD12G1068600.v1.1 MD12G1193200.v1.1 MD13G1050600.v1.1 MD15G1374900.v1.1 MD15G1375100.v1.1 MD15G1416500.v1.1 MD17G1072500.v1.1 MD17G1274200.v1.1 MD17G1274900.v1.1
prunus_persica Prupe.2G121000_v2.0.a1 Prupe.2G121000_v2.0.a1 Prupe.2G125800_v2.0.a1 Prupe.2G126000_v2.0.a1 Prupe.2G126100_v2.0.a1 Prupe.2G126200_v2.0.a1 Prupe.2G126300_v2.0.a1 Prupe.2G126400_v2.0.a1 Prupe.2G126500_v2.0.a1 Prupe.2G126600_v2.0.a1 Prupe.2G126700_v2.0.a1 Prupe.2G126700_v2.0.a1 Prupe.2G126800_v2.0.a1 Prupe.2G126900_v2.0.a1 Prupe.2G127000_v2.0.a1 Prupe.2G127000_v2.0.a1 Prupe.2G127000_v2.0.a1 Prupe.2G127000_v2.0.a1 Prupe.2G135500_v2.0.a1 Prupe.2G135600_v2.0.a1 Prupe.2G135700_v2.0.a1 Prupe.2G135700_v2.0.a1 Prupe.3G009800_v2.0.a1 Prupe.3G010200_v2.0.a1 Prupe.3G131000_v2.0.a1 Prupe.4G260800_v2.0.a1 Prupe.4G260900_v2.0.a1 Prupe.6G083100_v2.0.a1 Prupe.6G083200_v2.0.a1 Prupe.6G083400_v2.0.a1 Prupe.6G132100_v2.0.a1 Prupe.8G184900_v2.0.a1 Prupe.8G185200_v2.0.a1 Prupe.8G185300_v2.0.a1
pyrus_communis pycom02g17870 pycom02g17880 pycom02g19520 pycom02g22610 pycom02g22630 pycom02g22680 pycom05g13540 pycom05g14680 pycom07g04880 pycom07g04890 pycom07g05690 pycom07g05710 pycom07g05720 pycom07g05750 pycom07g05780 pycom07g06300 pycom07g08320 pycom07g08330 pycom07g08350 pycom07g08360 pycom07g08370 pycom07g08410 pycom07g08420 pycom07g08430 pycom07g08440 pycom07g08470 pycom07g08480 pycom07g08520 pycom07g08550 pycom07g08560 pycom07g08640 pycom07g08660 pycom07g08670 pycom07g08680 pycom07g08690 pycom07g08720 pycom07g08730 pycom07g08790 pycom07g08800 pycom07g08810 pycom07g08860 pycom07g08890 pycom07g09720 pycom08g01590 pycom08g01600 pycom08g01620 pycom08g01630 pycom08g01640 pycom10g12630 pycom15g16490 pycom17g07200 pycom17g07210 pycom17g07220 pycom17g11730 pycom17g11740 pycom17g27340 pycom17g27380
rosa_chinensis RchiOBHm_Chr1g0342571 RchiOBHm_Chr1g0346231 RchiOBHm_Chr1g0346831 RchiOBHm_Chr1g0346891 RchiOBHm_Chr1g0348311 RchiOBHm_Chr1g0348321 RchiOBHm_Chr1g0348331 RchiOBHm_Chr1g0348361 RchiOBHm_Chr1g0348371 RchiOBHm_Chr1g0348381 RchiOBHm_Chr1g0348401 RchiOBHm_Chr1g0348411 RchiOBHm_Chr1g0348421 RchiOBHm_Chr1g0348431 RchiOBHm_Chr2g0130881 RchiOBHm_Chr3g0487331 RchiOBHm_Chr5g0060371 RchiOBHm_Chr6g0246491 RchiOBHm_Chr6g0246871 RchiOBHm_Chr6g0250311 RchiOBHm_Chr6g0250781 RchiOBHm_Chr6g0251431 RchiOBHm_Chr6g0281871 RchiOBHm_Chr6g0281881 RchiOBHm_Chr6g0281931 RchiOBHm_Chr6g0281941 RchiOBHm_Chr6g0281951 RchiOBHm_Chr6g0281971 RchiOBHm_Chr6g0281981 RchiOBHm_Chr7g0240541 RchiOBHm_Chr7g0240631 RchiOBHm_Chr7g0240671
rosa_laevigata RLG00000000627 RLG00000000631 RLG00000000641 RLG00000000645 RLG00000000652 RLG00000000662 RLG00000000663 RLG00000000667 RLG00000000670 RLG00000000702 RLG00000001216 RLG00000001219 RLG00000007678 RLG00000012923 RLG00000012996 RLG00000013243 RLG00000017513 RLG00000017514 RLG00000020936 RLG00000022755 RLG00000023013 RLG00000028646 RLG00000028654 RLG00000028662 RLG00000028665 RLG00000028667 RLG00000028711 RLG00000028714 RLG00000028716 RLG00000028770 RLG00000028771 RLG00000028773 RLG00000028778 RLG00000028798 RLG00000028809 RLG00000028813 RLG00000029334 RLG00000030003 RLG00000033910 RLG00000034358 RLG00000035430
rosa_multiflora Rmu_co8031134.1_g000001 Rmu_co8092796.1_g000001 Rmu_co8130156.1_g000001 Rmu_co8325323.1_g000001 Rmu_co8424083.1_g000002 Rmu_sc0000008.1_g000003 Rmu_sc0000008.1_g000011 Rmu_sc0000008.1_g000015 Rmu_sc0000008.1_g000020 Rmu_sc0000091.1_g000015 Rmu_sc0000091.1_g000018 Rmu_sc0000091.1_g000029 Rmu_sc0000091.1_g000031 Rmu_sc0000391.1_g000004 Rmu_sc0001070.1_g000030 Rmu_sc0001293.1_g000016 Rmu_sc0001674.1_g000006 Rmu_sc0001731.1_g000002 Rmu_sc0001731.1_g000003 Rmu_sc0001731.1_g000005 Rmu_sc0001911.1_g000029 Rmu_sc0001913.1_g000038 Rmu_sc0001955.1_g000025 Rmu_sc0001992.1_g000022 Rmu_sc0001992.1_g000028 Rmu_sc0001992.1_g000031 Rmu_sc0002517.1_g000013 Rmu_sc0002517.1_g000017 Rmu_sc0002551.1_g000022 Rmu_sc0002551.1_g000029 Rmu_sc0002551.1_g000038 Rmu_sc0002705.1_g000015 Rmu_sc0002705.1_g000016 Rmu_sc0002882.1_g000055 Rmu_sc0003232.1_g000027 Rmu_sc0003363.1_g000037 Rmu_sc0003600.1_g000054 Rmu_sc0003918.1_g000011 Rmu_sc0004395.1_g000011 Rmu_sc0005071.1_g000004 Rmu_sc0005255.1_g000018 Rmu_sc0005327.1_g000004 Rmu_sc0005597.1_g000007 Rmu_sc0007060.1_g000007 Rmu_sc0007310.1_g000003 Rmu_sc0007383.1_g000014 Rmu_sc0007799.1_g000003 Rmu_sc0008477.1_g000016 Rmu_sc0010151.1_g000009 Rmu_sc0011217.1_g000005 Rmu_sc0016269.1_g000006 Rmu_sc0021495.1_g000001 Rmu_sc0027364.1_g000001 Rmu_sc0029432.1_g000001 Rmu_sc0041386.1_g000001 Rmu_ssc0000126.1_g000023 Rmu_ssc0000126.1_g000027
rosa_roxburghii Rroxscaffold_1G00006130 Rroxscaffold_1G00023320 Rroxscaffold_1G00038770 Rroxscaffold_2G00119800 Rroxscaffold_2G00121860 Rroxscaffold_3G00219780 Rroxscaffold_3G00219890 Rroxscaffold_4G00306740 Rroxscaffold_4G00306820 Rroxscaffold_4G00307000 Rroxscaffold_4G00307010 Rroxscaffold_4G00307020 Rroxscaffold_4G00308030 Rroxscaffold_4G00308070 Rroxscaffold_4G00308450 Rroxscaffold_4G00308460 Rroxscaffold_4G00315320 Rroxscaffold_5G00352470 Rroxscaffold_5G00371420 Rroxscaffold_6G00392300 Rroxscaffold_6G00394870 Rroxscaffold_6G00394890 Rroxscaffold_7G00186700 Rroxscaffold_7G00194980 Rroxscaffold_7G00216840
rosa_rugosa Rorug01G0076100 Rorug01G0128100 Rorug01G0149000.1 Rorug01G0149500.1 Rorug01G0180000 Rorug01G0180100 Rorug01G0182900 Rorug01G0184000 Rorug01G0184100 Rorug01G0184300 Rorug01G0184600 Rorug01G0184700 Rorug01G0184700 Rorug01G0184900 Rorug01G0185000 Rorug01G0185100 Rorug01G0189300 Rorug01G0194100 Rorug01G0194100 Rorug01G0194200 Rorug01G0194400 Rorug01G0194400 Rorug01G0194500 Rorug02G0090400 Rorug02G0090400 Rorug03G0233000 Rorug03G0233100 Rorug05G0178600 Rorug05G0178700 Rorug05G0579200 Rorug06G0144100 Rorug06G0144300 Rorug06G0144300 Rorug06G0179300 Rorug06G0208800 Rorug07G0323500 Rorug07G0337000
rosa_samantha Rh1AG046100 Rh1AG201400 Rh1AG201800 Rh1AG202100 Rh1AG202600 Rh1AG211500 Rh1AG211800 Rh1AG212200 Rh1AG212500 Rh1AG212600 Rh1AG214200 Rh1BG168000 Rh1BG168300 Rh1BG168500 Rh1BG177900 Rh1BG178200 Rh1BG178300 Rh1BG178800 Rh1BG178900 Rh1CG080900 Rh1CG183300 Rh1CG186300 Rh1CG186700 Rh1CG187000 Rh1CG187300 Rh1CG193400 Rh1CG195800 Rh1CG196000 Rh1CG196100 Rh1CG196400 Rh1CG196500 Rh1CG196800 Rh1CG198800 Rh1CG442600 Rh1DG086200 Rh1DG155400 Rh1DG156200 Rh1DG194000 Rh1DG194300 Rh1DG194900 Rh1DG197000 Rh1DG198800 Rh1DG199000 Rh1DG199200 Rh1DG202000 Rh1DG203900 Rh1DG207600 Rh1DG207900 Rh1DG208000 Rh1DG208500 Rh1DG208600 Rh1DG208700 Rh3CG339100 Rh5AG106500 Rh5AG264800 Rh5AG265300 Rh5CG302800 Rh5DG277900 Rh6AG257600 Rh6AG257700 Rh6BG260500 Rh6BG260700 Rh6CG259600 Rh6CG259700 Rh6DG252100 Rh7DG126900
rosa_wichuraiana Rw0G005780 Rw0G007540 Rw0G007550 Rw0G007560 Rw0G009390 Rw1G016900 Rw1G016930 Rw1G016940 Rw1G016970 Rw1G017860 Rw1G017890 Rw1G017900 Rw1G017910 Rw1G017920 Rw1G017960 Rw1G017970 Rw1G017980 Rw1G018150 Rw4G000830 Rw5G009290 Rw5G018950 Rw5G024850 Rw5G024870 Rw5G040460 Rw6G022290 Rw7G041020 Rw7G041200 Rw7G041360 Rw7G041450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 58
AccB7I CCANNNNNTGG 1 cut(s) 872
AccI GTMKAC 1 cut(s) 322
AciI CCGC 1 cut(s) 1164
AclWI GGATC 3 cut(s) 222, 1049, 1064
AcoI YGGCCR 1 cut(s) 80
AcsI RAATTY 2 cut(s) 230, 1337
AcuI CTGAAG 3 cut(s) 604, 956, 1335
AfaI GTAC 3 cut(s) 238, 458, 1037
AfiI CCNNNNNNNGG 3 cut(s) 575, 641, 872
AgsI TTSAA 7 cut(s) 23, 252, 290, 386, 742, 806, 922
AhdI GACNNNNNGTC 2 cut(s) 568, 825
AhlI ACTAGT 1 cut(s) 436
AjiI CACGTC 1 cut(s) 1138
AjnI CCWGG 4 cut(s) 594, 634, 655, 1144
AleI CACNNNNGTG 1 cut(s) 394
AloI GAACNNNNNNTCC 2 cut(s) 636, 668
AluBI AGCT 4 cut(s) 49, 150, 222, 1313
AluI AGCT 4 cut(s) 49, 150, 222, 1313
Alw21I GWGCWC 1 cut(s) 350
Alw26I GTCTC 1 cut(s) 949
AlwI GGATC 3 cut(s) 222, 1049, 1064
AlwNI CAGNNNCTG 1 cut(s) 601
AoxI GGCC 3 cut(s) 80, 259, 1142
ApeKI GCWGC 4 cut(s) 150, 1041, 1298, 1329
ApoI RAATTY 2 cut(s) 230, 1337
AseI ATTAAT 1 cut(s) 797
Asp700I GAANNNNTTC 2 cut(s) 585, 917
AspLEI GCGC 1 cut(s) 1372
AspS9I GGNCC 1 cut(s) 1169
AsuHPI GGTGA 3 cut(s) 437, 941, 1108
AvaII GGWCC 1 cut(s) 1169
BarI GAAGNNNNNNTAC 2 cut(s) 181, 213
BauI CACGAG 1 cut(s) 823
Bbv12I GWGCWC 1 cut(s) 350
BbvI GCAGC 4 cut(s) 137, 1053, 1310, 1341
BccI CCATC 3 cut(s) 92, 866, 1200
BceAI ACGGC 3 cut(s) 95, 832, 874
BciT130I CCWGG 4 cut(s) 596, 636, 657, 1146
BclI TGATCA 1 cut(s) 495
BcoDI GTCTC 1 cut(s) 949
BcuI ACTAGT 1 cut(s) 436
BfaI CTAG 5 cut(s) 177, 267, 437, 1059, 1295
BfmI CTRYAG 1 cut(s) 295
BfuAI ACCTGC 1 cut(s) 58
BglI GCCNNNNNGGC 1 cut(s) 1230
BglII AGATCT 1 cut(s) 337
BisI GCNGC 4 cut(s) 151, 1042, 1299, 1330
BlpI GCTNAGC 1 cut(s) 893
BlsI GCNGC 4 cut(s) 152, 1043, 1300, 1331
Bme1390I CCNGG 4 cut(s) 596, 636, 657, 1146
Bme18I GGWCC 1 cut(s) 1169
BmeRI GACNNNNNGTC 2 cut(s) 568, 825
BmgBI CACGTC 1 cut(s) 1138
BmgT120I GGNCC 1 cut(s) 1169
BmiI GGNNCC 4 cut(s) 112, 654, 914, 1171
BmrFI CCNGG 4 cut(s) 596, 636, 657, 1146
BmsI GCATC 3 cut(s) 600, 1066, 1242
Bpu1102I GCTNAGC 1 cut(s) 893
BsaJI CCNNGG 4 cut(s) 366, 528, 595, 1145
Bsc4I CCNNNNNNNGG 3 cut(s) 575, 641, 872
Bse1I ACTGG 2 cut(s) 458, 971
BseBI CCWGG 4 cut(s) 596, 636, 657, 1146
BseDI CCNNGG 4 cut(s) 366, 528, 595, 1145
BseGI GGATG 1 cut(s) 591
BseLI CCNNNNNNNGG 3 cut(s) 575, 641, 872
BseMII CTCAG 3 cut(s) 232, 286, 335
BseNI ACTGG 2 cut(s) 458, 971
BseXI GCAGC 4 cut(s) 137, 1053, 1310, 1341
BseYI CCCAGC 1 cut(s) 62
Bsh1285I CGRYCG 1 cut(s) 1219
BshFI GGCC 3 cut(s) 82, 261, 1144
BsiEI CGRYCG 1 cut(s) 1219
BsiHKAI GWGCWC 1 cut(s) 350
BslFI GGGAC 2 cut(s) 612, 1162
BslI CCNNNNNNNGG 3 cut(s) 575, 641, 872
BsmAI GTCTC 1 cut(s) 949
BsmFI GGGAC 2 cut(s) 612, 1162
BsmI GAATGC 1 cut(s) 861
BsnI GGCC 3 cut(s) 82, 261, 1144
Bsp1286I GDGCHC 1 cut(s) 350
Bsp143I GATC 8 cut(s) 43, 214, 337, 495, 729, 1054, 1069, 1216
Bsp1720I GCTNAGC 1 cut(s) 893
Bsp19I CCATGG 1 cut(s) 528
BspACI CCGC 1 cut(s) 1164
BspANI GGCC 3 cut(s) 82, 261, 1144
BspCNI CTCAG 3 cut(s) 231, 285, 336
BspLI GGNNCC 4 cut(s) 112, 654, 914, 1171
BspMI ACCTGC 1 cut(s) 58
BspPI GGATC 3 cut(s) 222, 1049, 1064
BsrI ACTGG 2 cut(s) 458, 971
BssECI CCNNGG 4 cut(s) 366, 528, 595, 1145
BssMI GATC 8 cut(s) 43, 214, 337, 495, 729, 1054, 1069, 1216
BssSI CACGAG 1 cut(s) 823
BssT1I CCWWGG 2 cut(s) 366, 528
Bst2BI CACGAG 1 cut(s) 823
Bst2UI CCWGG 4 cut(s) 596, 636, 657, 1146
Bst4CI ACNGT 4 cut(s) 481, 663, 943, 1035
Bst6I CTCTTC 1 cut(s) 1008
BstDEI CTNAG 5 cut(s) 218, 272, 344, 893, 1226
BstDSI CCRYGG 1 cut(s) 528
BstF5I GGATG 1 cut(s) 591
BstHHI GCGC 1 cut(s) 1372
BstKTI GATC 8 cut(s) 46, 217, 340, 498, 732, 1057, 1072, 1219
BstMAI GTCTC 1 cut(s) 949
BstMBI GATC 8 cut(s) 43, 214, 337, 495, 729, 1054, 1069, 1216
BstMCI CGRYCG 1 cut(s) 1219
BstMWI GCNNNNNNNGC 1 cut(s) 1230
BstNI CCWGG 4 cut(s) 596, 636, 657, 1146
BstSCI CCNGG 4 cut(s) 594, 634, 655, 1144
BstSFI CTRYAG 1 cut(s) 295
BstV1I GCAGC 4 cut(s) 137, 1053, 1310, 1341
BstX2I RGATCY 3 cut(s) 214, 337, 1054
BstXI CCANNNNNNTGG 1 cut(s) 966
BstYI RGATCY 3 cut(s) 214, 337, 1054
BsuRI GGCC 3 cut(s) 82, 261, 1144
BtgI CCRYGG 1 cut(s) 528
BtrI CACGTC 1 cut(s) 1138
BtsCI GGATG 1 cut(s) 591
BtsI GCAGTG 1 cut(s) 1051
BtsIMutI CAGTG 3 cut(s) 451, 939, 1051
BveI ACCTGC 1 cut(s) 58
CaiI CAGNNNCTG 1 cut(s) 601
CfoI GCGC 1 cut(s) 1372
Cfr13I GGNCC 1 cut(s) 1169
CseI GACGC 1 cut(s) 286
Csp6I GTAC 3 cut(s) 237, 457, 1036
CviAII CATG 6 cut(s) 529, 605, 762, 852, 1004, 1367
CviQI GTAC 3 cut(s) 237, 457, 1036
DdeI CTNAG 5 cut(s) 218, 272, 344, 893, 1226
DpnI GATC 8 cut(s) 45, 216, 339, 497, 731, 1056, 1071, 1218
DpnII GATC 8 cut(s) 43, 214, 337, 495, 729, 1054, 1069, 1216
DriI GACNNNNNGTC 2 cut(s) 568, 825
EaeI YGGCCR 1 cut(s) 80
Eam1104I CTCTTC 1 cut(s) 1008
Eam1105I GACNNNNNGTC 2 cut(s) 568, 825
EarI CTCTTC 1 cut(s) 1008
Eco130I CCWWGG 2 cut(s) 366, 528
Eco147I AGGCCT 1 cut(s) 261
Eco47I GGWCC 1 cut(s) 1169
Eco57I CTGAAG 3 cut(s) 604, 956, 1335
EcoRII CCWGG 4 cut(s) 594, 634, 655, 1144
EcoT14I CCWWGG 2 cut(s) 366, 528
EcoT22I ATGCAT 1 cut(s) 763
ErhI CCWWGG 2 cut(s) 366, 528
FaeI CATG 6 cut(s) 532, 608, 765, 855, 1007, 1370
FaqI GGGAC 2 cut(s) 612, 1162
FatI CATG 6 cut(s) 528, 604, 761, 851, 1003, 1366
FauNDI CATATG 1 cut(s) 556
FbaI TGATCA 1 cut(s) 495
FblI GTMKAC 1 cut(s) 322
Fnu4HI GCNGC 4 cut(s) 151, 1042, 1299, 1330
FokI GGATG 1 cut(s) 578
Fsp4HI GCNGC 4 cut(s) 151, 1042, 1299, 1330
FspBI CTAG 5 cut(s) 177, 267, 437, 1059, 1295
GlaI GCGC 1 cut(s) 1371
GluI GCNGC 4 cut(s) 151, 1042, 1299, 1330
GsaI CCCAGC 1 cut(s) 66
HaeIII GGCC 3 cut(s) 82, 261, 1144
HgaI GACGC 1 cut(s) 286
HhaI GCGC 1 cut(s) 1372
Hin1II CATG 6 cut(s) 532, 608, 765, 855, 1007, 1370
Hin6I GCGC 1 cut(s) 1370
HinP1I GCGC 1 cut(s) 1370
HincII GTYRAC 1 cut(s) 484
HindII GTYRAC 1 cut(s) 484
HinfI GANTC 9 cut(s) 248, 270, 290, 428, 445, 524, 563, 581, 826
HphI GGTGA 3 cut(s) 437, 941, 1108
Hpy166II GTNNAC 3 cut(s) 323, 484, 1169
Hpy188I TCNGA 6 cut(s) 163, 257, 574, 734, 831, 1126
Hpy188III TCNNGA 3 cut(s) 267, 274, 1073
Hpy8I GTNNAC 3 cut(s) 323, 484, 1169
Hpy99I CGWCG 1 cut(s) 574
HpyAV CCTTC 1 cut(s) 569
HpyCH4III ACNGT 4 cut(s) 481, 663, 943, 1035
HpyCH4IV ACGT 1 cut(s) 1137
HpyCH4V TGCA 8 cut(s) 153, 399, 547, 560, 604, 761, 1003, 1350
HpyF10VI GCNNNNNNNGC 1 cut(s) 1230
HpyF3I CTNAG 5 cut(s) 218, 272, 344, 893, 1226
HpySE526I ACGT 1 cut(s) 1137
Hsp92II CATG 6 cut(s) 532, 608, 765, 855, 1007, 1370
HspAI GCGC 1 cut(s) 1370
Ksp22I TGATCA 1 cut(s) 495
Kzo9I GATC 8 cut(s) 43, 214, 337, 495, 729, 1054, 1069, 1216
Lsp1109I GCAGC 4 cut(s) 137, 1053, 1310, 1341
LweI GCATC 3 cut(s) 600, 1066, 1242
MaeI CTAG 5 cut(s) 177, 267, 437, 1059, 1295
MaeII ACGT 1 cut(s) 1137
MaeIII GTNAC 5 cut(s) 188, 425, 775, 854, 937
MalI GATC 8 cut(s) 45, 216, 339, 497, 731, 1056, 1071, 1218
MboI GATC 8 cut(s) 43, 214, 337, 495, 729, 1054, 1069, 1216
MboII GAAGA 9 cut(s) 189, 610, 1022, 1025, 1030, 1265, 1280, 1319, 1333
MflI RGATCY 3 cut(s) 214, 337, 1054
MhlI GDGCHC 1 cut(s) 350
MluCI AATT 4 cut(s) 230, 312, 917, 1337
MlyI GAGTC 4 cut(s) 264, 422, 557, 835
MmeI TCCRAC 2 cut(s) 540, 552
MnlI CCTC 8 cut(s) 251, 643, 700, 728, 1000, 1087, 1169, 1319
Mph1103I ATGCAT 1 cut(s) 763
MroXI GAANNNNTTC 2 cut(s) 585, 917
MseI TTAA 8 cut(s) 12, 89, 137, 282, 464, 720, 797, 1089
MslI CAYNNNNRTG 4 cut(s) 394, 491, 542, 609
MspR9I CCNGG 4 cut(s) 596, 636, 657, 1146
Mva1269I GAATGC 1 cut(s) 861
MvaI CCWGG 4 cut(s) 596, 636, 657, 1146
MwoI GCNNNNNNNGC 1 cut(s) 1230
NcoI CCATGG 1 cut(s) 528
NdeI CATATG 1 cut(s) 556
NdeII GATC 8 cut(s) 43, 214, 337, 495, 729, 1054, 1069, 1216
NlaIII CATG 6 cut(s) 532, 608, 765, 855, 1007, 1370
NlaIV GGNNCC 4 cut(s) 112, 654, 914, 1171
NmuCI GTSAC 2 cut(s) 425, 937
NsiI ATGCAT 1 cut(s) 763
OliI CACNNNNGTG 1 cut(s) 394
PceI AGGCCT 1 cut(s) 261
PctI GAATGC 1 cut(s) 861
PdmI GAANNNNTTC 2 cut(s) 585, 917
PfeI GAWTC 5 cut(s) 248, 290, 445, 524, 581
PflMI CCANNNNNTGG 1 cut(s) 872
PfoI TCCNGGA 2 cut(s) 634, 655
PkrI GCNGC 4 cut(s) 152, 1043, 1300, 1331
Ple19I CGATCG 1 cut(s) 1219
PleI GAGTC 4 cut(s) 264, 422, 557, 834
PpsI GAGTC 4 cut(s) 264, 422, 557, 834
PshBI ATTAAT 1 cut(s) 797
Psp6I CCWGG 4 cut(s) 594, 634, 655, 1144
PspFI CCCAGC 1 cut(s) 62
PspGI CCWGG 4 cut(s) 594, 634, 655, 1144
PspN4I GGNNCC 4 cut(s) 112, 654, 914, 1171
PspPI GGNCC 1 cut(s) 1169
PsrI GAACNNNNNNTAC 2 cut(s) 670, 702
PstNI CAGNNNCTG 1 cut(s) 601
PsuI RGATCY 3 cut(s) 214, 337, 1054
PvuI CGATCG 1 cut(s) 1219
RsaI GTAC 3 cut(s) 238, 458, 1037
RsaNI GTAC 3 cut(s) 237, 457, 1036
RseI CAYNNNNRTG 4 cut(s) 394, 491, 542, 609
SaqAI TTAA 8 cut(s) 12, 89, 137, 282, 464, 720, 797, 1089
SatI GCNGC 4 cut(s) 151, 1042, 1299, 1330
Sau3AI GATC 8 cut(s) 43, 214, 337, 495, 729, 1054, 1069, 1216
Sau96I GGNCC 1 cut(s) 1169
SchI GAGTC 4 cut(s) 264, 422, 557, 835
ScrFI CCNGG 4 cut(s) 596, 636, 657, 1146
SduI GDGCHC 1 cut(s) 350
SfaNI GCATC 3 cut(s) 600, 1066, 1242
SfcI CTRYAG 1 cut(s) 295
SinI GGWCC 1 cut(s) 1169
SmiMI CAYNNNNRTG 4 cut(s) 394, 491, 542, 609
SpeI ACTAGT 1 cut(s) 436
Sse9I AATT 4 cut(s) 230, 312, 917, 1337
SseBI AGGCCT 1 cut(s) 261
SsiI CCGC 1 cut(s) 1164
SspI AATATT 2 cut(s) 157, 951
SspMI CTAG 5 cut(s) 177, 267, 437, 1059, 1295
StuI AGGCCT 1 cut(s) 261
StyD4I CCNGG 4 cut(s) 594, 634, 655, 1144
StyI CCWWGG 2 cut(s) 366, 528
TaaI ACNGT 4 cut(s) 481, 663, 943, 1035
TaiI ACGT 1 cut(s) 1140
TaqI TCGA 1 cut(s) 431
TasI AATT 4 cut(s) 230, 312, 917, 1337
TatI WGTACW 1 cut(s) 1035
TfiI GAWTC 5 cut(s) 248, 290, 445, 524, 581
Tru1I TTAA 8 cut(s) 12, 89, 137, 282, 464, 720, 797, 1089
Tru9I TTAA 8 cut(s) 12, 89, 137, 282, 464, 720, 797, 1089
TscAI CASTG 3 cut(s) 458, 946, 1051
TseFI GTSAC 2 cut(s) 425, 937
TseI GCWGC 4 cut(s) 150, 1041, 1298, 1329
Tsp45I GTSAC 2 cut(s) 425, 937
TspDTI ATGAA 3 cut(s) 189, 621, 1266
TspGWI ACGGA 2 cut(s) 657, 1274
TspRI CASTG 3 cut(s) 458, 946, 1051
Van91I CCANNNNNTGG 1 cut(s) 872
VpaK11BI GGWCC 1 cut(s) 1169
VspI ATTAAT 1 cut(s) 797
XapI RAATTY 2 cut(s) 230, 1337
XbaI TCTAGA 1 cut(s) 266
XcmI CCANNNNNNNNNTGG 1 cut(s) 923
XmiI GTMKAC 1 cut(s) 322
XmnI GAANNNNTTC 2 cut(s) 585, 917
XspI CTAG 5 cut(s) 177, 267, 437, 1059, 1295
Zsp2I ATGCAT 1 cut(s) 763
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.