TMV resistance protein N-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 230 |
| AclWI | GGATC | 1 cut(s) | 344 |
| AcoI | YGGCCR | 1 cut(s) | 474 |
| AfaI | GTAC | 2 cut(s) | 402, 509 |
| AfeI | AGCGCT | 1 cut(s) | 413 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 85, 153, 363 |
| AgsI | TTSAA | 3 cut(s) | 42, 222, 418 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 410, 442 |
| AluBI | AGCT | 4 cut(s) | 102, 169, 392, 458 |
| AluI | AGCT | 4 cut(s) | 102, 169, 392, 458 |
| AlwI | GGATC | 1 cut(s) | 344 |
| Aor51HI | AGCGCT | 1 cut(s) | 413 |
| AoxI | GGCC | 1 cut(s) | 474 |
| ApeKI | GCWGC | 2 cut(s) | 122, 458 |
| AspLEI | GCGC | 2 cut(s) | 232, 414 |
| AsuHPI | GGTGA | 1 cut(s) | 95 |
| BalI | TGGCCA | 1 cut(s) | 476 |
| BbvI | GCAGC | 2 cut(s) | 109, 445 |
| BccI | CCATC | 1 cut(s) | 361 |
| BciVI | GTATCC | 1 cut(s) | 82 |
| BfaI | CTAG | 1 cut(s) | 128 |
| BfoI | RGCGCY | 1 cut(s) | 415 |
| BfuI | GTATCC | 1 cut(s) | 82 |
| BisI | GCNGC | 2 cut(s) | 123, 459 |
| BlsI | GCNGC | 2 cut(s) | 124, 460 |
| BpuEI | CTTGAG | 2 cut(s) | 229, 453 |
| BsaAI | YACGTR | 1 cut(s) | 511 |
| BsaBI | GATNNNNATC | 1 cut(s) | 348 |
| BsaJI | CCNNGG | 2 cut(s) | 79, 357 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 85, 153, 363 |
| Bse8I | GATNNNNATC | 1 cut(s) | 348 |
| BseDI | CCNNGG | 2 cut(s) | 79, 357 |
| BseGI | GGATG | 4 cut(s) | 163, 283, 353, 427 |
| BseJI | GATNNNNATC | 1 cut(s) | 348 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 85, 153, 363 |
| BseMII | CTCAG | 1 cut(s) | 85 |
| BseRI | GAGGAG | 2 cut(s) | 10, 13 |
| BseXI | GCAGC | 2 cut(s) | 109, 445 |
| Bsh1236I | CGCG | 1 cut(s) | 230 |
| BshFI | GGCC | 1 cut(s) | 476 |
| BslFI | GGGAC | 1 cut(s) | 19 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 85, 153, 363 |
| BsmFI | GGGAC | 1 cut(s) | 19 |
| BsnI | GGCC | 1 cut(s) | 476 |
| Bsp143I | GATC | 3 cut(s) | 109, 264, 349 |
| BspANI | GGCC | 1 cut(s) | 476 |
| BspCNI | CTCAG | 1 cut(s) | 84 |
| BspFNI | CGCG | 1 cut(s) | 230 |
| BspPI | GGATC | 1 cut(s) | 344 |
| BspQI | GCTCTTC | 1 cut(s) | 159 |
| BssECI | CCNNGG | 2 cut(s) | 79, 357 |
| BssMI | GATC | 3 cut(s) | 109, 264, 349 |
| Bst6I | CTCTTC | 2 cut(s) | 40, 159 |
| BstBAI | YACGTR | 1 cut(s) | 511 |
| BstDEI | CTNAG | 1 cut(s) | 71 |
| BstF5I | GGATG | 4 cut(s) | 163, 283, 353, 427 |
| BstFNI | CGCG | 1 cut(s) | 230 |
| BstH2I | RGCGCY | 1 cut(s) | 415 |
| BstHHI | GCGC | 2 cut(s) | 232, 414 |
| BstKTI | GATC | 3 cut(s) | 112, 267, 352 |
| BstMBI | GATC | 3 cut(s) | 109, 264, 349 |
| BstSNI | TACGTA | 1 cut(s) | 511 |
| BstUI | CGCG | 1 cut(s) | 230 |
| BstV1I | GCAGC | 2 cut(s) | 109, 445 |
| BstX2I | RGATCY | 1 cut(s) | 349 |
| BstYI | RGATCY | 1 cut(s) | 349 |
| BsuI | GTATCC | 1 cut(s) | 82 |
| BsuRI | GGCC | 1 cut(s) | 476 |
| BtsCI | GGATG | 4 cut(s) | 163, 283, 353, 427 |
| CfoI | GCGC | 2 cut(s) | 232, 414 |
| Csp6I | GTAC | 2 cut(s) | 401, 508 |
| CviAII | CATG | 2 cut(s) | 304, 404 |
| CviJI | RGCY | 7 cut(s) | 102, 169, 185, 209, 392, 458, 476 |
| CviKI_1 | RGCY | 7 cut(s) | 102, 169, 185, 209, 392, 458, 476 |
| CviQI | GTAC | 2 cut(s) | 401, 508 |
| DdeI | CTNAG | 1 cut(s) | 71 |
| DpnI | GATC | 3 cut(s) | 111, 266, 351 |
| DpnII | GATC | 3 cut(s) | 109, 264, 349 |
| EaeI | YGGCCR | 1 cut(s) | 474 |
| Eam1104I | CTCTTC | 2 cut(s) | 40, 159 |
| EarI | CTCTTC | 2 cut(s) | 40, 159 |
| Eco105I | TACGTA | 1 cut(s) | 511 |
| Eco47III | AGCGCT | 1 cut(s) | 413 |
| FaeI | CATG | 2 cut(s) | 307, 407 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 410, 442 |
| FaqI | GGGAC | 1 cut(s) | 19 |
| FatI | CATG | 2 cut(s) | 303, 403 |
| FauNDI | CATATG | 1 cut(s) | 377 |
| Fnu4HI | GCNGC | 2 cut(s) | 123, 459 |
| FokI | GGATG | 4 cut(s) | 170, 290, 340, 434 |
| Fsp4HI | GCNGC | 2 cut(s) | 123, 459 |
| FspBI | CTAG | 1 cut(s) | 128 |
| GlaI | GCGC | 2 cut(s) | 231, 413 |
| GluI | GCNGC | 2 cut(s) | 123, 459 |
| HaeII | RGCGCY | 1 cut(s) | 415 |
| HaeIII | GGCC | 1 cut(s) | 476 |
| HhaI | GCGC | 2 cut(s) | 232, 414 |
| Hin1II | CATG | 2 cut(s) | 307, 407 |
| Hin6I | GCGC | 2 cut(s) | 230, 412 |
| HinP1I | GCGC | 2 cut(s) | 230, 412 |
| HindIII | AAGCTT | 1 cut(s) | 390 |
| HinfI | GANTC | 2 cut(s) | 225, 466 |
| HphI | GGTGA | 1 cut(s) | 95 |
| Hpy188I | TCNGA | 2 cut(s) | 80, 358 |
| Hpy188III | TCNNGA | 6 cut(s) | 128, 202, 222, 246, 275, 486 |
| HpyAV | CCTTC | 2 cut(s) | 131, 412 |
| HpyCH4IV | ACGT | 2 cut(s) | 63, 510 |
| HpyCH4V | TGCA | 2 cut(s) | 303, 445 |
| HpyF3I | CTNAG | 1 cut(s) | 71 |
| HpySE526I | ACGT | 2 cut(s) | 63, 510 |
| Hsp92II | CATG | 2 cut(s) | 307, 407 |
| HspAI | GCGC | 2 cut(s) | 230, 412 |
| Kzo9I | GATC | 3 cut(s) | 109, 264, 349 |
| LguI | GCTCTTC | 1 cut(s) | 159 |
| LpnPI | CCDG | 6 cut(s) | 215, 253, 260, 298, 471, 485 |
| Lsp1109I | GCAGC | 2 cut(s) | 109, 445 |
| MaeI | CTAG | 1 cut(s) | 128 |
| MaeII | ACGT | 2 cut(s) | 63, 510 |
| MalI | GATC | 3 cut(s) | 111, 266, 351 |
| MboI | GATC | 3 cut(s) | 109, 264, 349 |
| MboII | GAAGA | 3 cut(s) | 27, 30, 176 |
| MflI | RGATCY | 1 cut(s) | 349 |
| MlsI | TGGCCA | 1 cut(s) | 476 |
| MluCI | AATT | 3 cut(s) | 11, 333, 523 |
| MluNI | TGGCCA | 1 cut(s) | 476 |
| MlyI | GAGTC | 1 cut(s) | 460 |
| MnlI | CCTC | 9 cut(s) | 28, 31, 34, 43, 74, 79, 170, 301, 352 |
| Mox20I | TGGCCA | 1 cut(s) | 476 |
| MscI | TGGCCA | 1 cut(s) | 476 |
| MslI | CAYNNNNRTG | 1 cut(s) | 117 |
| Msp20I | TGGCCA | 1 cut(s) | 476 |
| MvnI | CGCG | 1 cut(s) | 230 |
| NdeI | CATATG | 1 cut(s) | 377 |
| NdeII | GATC | 3 cut(s) | 109, 264, 349 |
| NlaIII | CATG | 2 cut(s) | 307, 407 |
| PciSI | GCTCTTC | 1 cut(s) | 159 |
| PfeI | GAWTC | 1 cut(s) | 225 |
| PkrI | GCNGC | 2 cut(s) | 124, 460 |
| PleI | GAGTC | 1 cut(s) | 460 |
| PpsI | GAGTC | 1 cut(s) | 460 |
| Ppu21I | YACGTR | 1 cut(s) | 511 |
| PsuI | RGATCY | 1 cut(s) | 349 |
| RsaI | GTAC | 2 cut(s) | 402, 509 |
| RsaNI | GTAC | 2 cut(s) | 401, 508 |
| RseI | CAYNNNNRTG | 1 cut(s) | 117 |
| SapI | GCTCTTC | 1 cut(s) | 159 |
| SatI | GCNGC | 2 cut(s) | 123, 459 |
| Sau3AI | GATC | 3 cut(s) | 109, 264, 349 |
| SchI | GAGTC | 1 cut(s) | 460 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 117 |
| SmlI | CTYRAG | 2 cut(s) | 244, 468 |
| SmoI | CTYRAG | 2 cut(s) | 244, 468 |
| SnaBI | TACGTA | 1 cut(s) | 511 |
| Sse9I | AATT | 3 cut(s) | 11, 333, 523 |
| SspMI | CTAG | 1 cut(s) | 128 |
| TaiI | ACGT | 2 cut(s) | 66, 513 |
| TaqI | TCGA | 1 cut(s) | 263 |
| TaqII | GACCGA | 1 cut(s) | 147 |
| TasI | AATT | 3 cut(s) | 11, 333, 523 |
| TfiI | GAWTC | 1 cut(s) | 225 |
| TseI | GCWGC | 2 cut(s) | 122, 458 |
| TspDTI | ATGAA | 5 cut(s) | 177, 180, 294, 420, 482 |
| XbaI | TCTAGA | 1 cut(s) | 127 |
| XspI | CTAG | 1 cut(s) | 128 |