TMV resistance protein N-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 612, 825 |
| AclWI | GGATC | 2 cut(s) | 468, 722 |
| AcsI | RAATTY | 1 cut(s) | 60 |
| AfaI | GTAC | 3 cut(s) | 88, 537, 565 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 32, 401, 644 |
| AgsI | TTSAA | 2 cut(s) | 324, 678 |
| AjnI | CCWGG | 4 cut(s) | 145, 160, 315, 394 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 141, 173 |
| AluBI | AGCT | 2 cut(s) | 881, 907 |
| AluI | AGCT | 2 cut(s) | 881, 907 |
| Alw21I | GWGCWC | 1 cut(s) | 801 |
| Alw26I | GTCTC | 1 cut(s) | 785 |
| AlwI | GGATC | 2 cut(s) | 468, 722 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 70 |
| AoxI | GGCC | 1 cut(s) | 163 |
| ApeKI | GCWGC | 4 cut(s) | 759, 809, 827, 839 |
| ApoI | RAATTY | 1 cut(s) | 60 |
| AsuHPI | GGTGA | 1 cut(s) | 737 |
| BbsI | GAAGAC | 2 cut(s) | 363, 414 |
| Bbv12I | GWGCWC | 1 cut(s) | 801 |
| BbvI | GCAGC | 4 cut(s) | 771, 796, 814, 826 |
| BccI | CCATC | 2 cut(s) | 607, 839 |
| BceAI | ACGGC | 2 cut(s) | 10, 622 |
| BciT130I | CCWGG | 4 cut(s) | 147, 162, 317, 396 |
| BciVI | GTATCC | 1 cut(s) | 519 |
| BcoDI | GTCTC | 1 cut(s) | 785 |
| BfaI | CTAG | 2 cut(s) | 306, 878 |
| BfmI | CTRYAG | 1 cut(s) | 681 |
| BfuI | GTATCC | 1 cut(s) | 519 |
| BisI | GCNGC | 5 cut(s) | 760, 810, 825, 828, 840 |
| BlsI | GCNGC | 5 cut(s) | 761, 811, 826, 829, 841 |
| Bme1390I | CCNGG | 4 cut(s) | 147, 162, 317, 396 |
| BmiI | GGNNCC | 1 cut(s) | 190 |
| BmrFI | CCNGG | 4 cut(s) | 147, 162, 317, 396 |
| BmsI | GCATC | 1 cut(s) | 749 |
| BpiI | GAAGAC | 2 cut(s) | 363, 414 |
| BsaI | GGTCTC | 1 cut(s) | 785 |
| BsaJI | CCNNGG | 2 cut(s) | 244, 316 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 32, 401, 644 |
| Bse1I | ACTGG | 3 cut(s) | 368, 613, 649 |
| Bse3DI | GCAATG | 2 cut(s) | 358, 753 |
| BseBI | CCWGG | 4 cut(s) | 147, 162, 317, 396 |
| BseDI | CCNNGG | 2 cut(s) | 244, 316 |
| BseGI | GGATG | 2 cut(s) | 21, 816 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 32, 401, 644 |
| BseMI | GCAATG | 2 cut(s) | 358, 753 |
| BseMII | CTCAG | 1 cut(s) | 796 |
| BseNI | ACTGG | 3 cut(s) | 368, 613, 649 |
| BseRI | GAGGAG | 2 cut(s) | 181, 184 |
| BseXI | GCAGC | 4 cut(s) | 771, 796, 814, 826 |
| Bsh1285I | CGRYCG | 1 cut(s) | 775 |
| BshFI | GGCC | 1 cut(s) | 165 |
| BsiEI | CGRYCG | 1 cut(s) | 775 |
| BsiHKAI | GWGCWC | 1 cut(s) | 801 |
| BslFI | GGGAC | 1 cut(s) | 81 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 32, 401, 644 |
| BsmAI | GTCTC | 1 cut(s) | 785 |
| BsmFI | GGGAC | 1 cut(s) | 81 |
| BsnI | GGCC | 1 cut(s) | 165 |
| Bso31I | GGTCTC | 1 cut(s) | 785 |
| Bsp1286I | GDGCHC | 1 cut(s) | 801 |
| Bsp1407I | TGTACA | 2 cut(s) | 86, 535 |
| Bsp143I | GATC | 4 cut(s) | 460, 727, 772, 862 |
| BspACI | CCGC | 2 cut(s) | 612, 825 |
| BspANI | GGCC | 1 cut(s) | 165 |
| BspCNI | CTCAG | 1 cut(s) | 795 |
| BspLI | GGNNCC | 1 cut(s) | 190 |
| BspPI | GGATC | 2 cut(s) | 468, 722 |
| BspTNI | GGTCTC | 1 cut(s) | 785 |
| BsrDI | GCAATG | 2 cut(s) | 358, 753 |
| BsrGI | TGTACA | 2 cut(s) | 86, 535 |
| BsrI | ACTGG | 3 cut(s) | 368, 613, 649 |
| BssECI | CCNNGG | 2 cut(s) | 244, 316 |
| BssMI | GATC | 4 cut(s) | 460, 727, 772, 862 |
| Bst2UI | CCWGG | 4 cut(s) | 147, 162, 317, 396 |
| Bst4CI | ACNGT | 2 cut(s) | 389, 682 |
| Bst6I | CTCTTC | 1 cut(s) | 708 |
| BstAUI | TGTACA | 2 cut(s) | 86, 535 |
| BstC8I | GCNNGC | 1 cut(s) | 23 |
| BstDEI | CTNAG | 1 cut(s) | 782 |
| BstF5I | GGATG | 2 cut(s) | 21, 816 |
| BstKTI | GATC | 4 cut(s) | 463, 730, 775, 865 |
| BstMAI | GTCTC | 1 cut(s) | 785 |
| BstMBI | GATC | 4 cut(s) | 460, 727, 772, 862 |
| BstMCI | CGRYCG | 1 cut(s) | 775 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 768, 836 |
| BstNI | CCWGG | 4 cut(s) | 147, 162, 317, 396 |
| BstNSI | RCATGY | 1 cut(s) | 494 |
| BstSCI | CCNGG | 4 cut(s) | 145, 160, 315, 394 |
| BstSFI | CTRYAG | 1 cut(s) | 681 |
| BstV1I | GCAGC | 4 cut(s) | 771, 796, 814, 826 |
| BstV2I | GAAGAC | 2 cut(s) | 363, 414 |
| BsuI | GTATCC | 1 cut(s) | 519 |
| BsuRI | GGCC | 1 cut(s) | 165 |
| BtgZI | GCGATG | 1 cut(s) | 790 |
| BtsCI | GGATG | 2 cut(s) | 21, 816 |
| BtsI | GCAGTG | 1 cut(s) | 726 |
| BtsIMutI | CAGTG | 3 cut(s) | 606, 726, 841 |
| Cac8I | GCNNGC | 1 cut(s) | 23 |
| CaiI | CAGNNNCTG | 1 cut(s) | 70 |
| Csp6I | GTAC | 3 cut(s) | 87, 536, 564 |
| CviAII | CATG | 3 cut(s) | 74, 412, 491 |
| CviJI | RGCY | 8 cut(s) | 25, 165, 189, 249, 470, 637, 881, 907 |
| CviKI_1 | RGCY | 8 cut(s) | 25, 165, 189, 249, 470, 637, 881, 907 |
| CviQI | GTAC | 3 cut(s) | 87, 536, 564 |
| DdeI | CTNAG | 1 cut(s) | 782 |
| DpnI | GATC | 4 cut(s) | 462, 729, 774, 864 |
| DpnII | GATC | 4 cut(s) | 460, 727, 772, 862 |
| Eam1104I | CTCTTC | 1 cut(s) | 708 |
| EarI | CTCTTC | 1 cut(s) | 708 |
| EciI | GGCGGA | 1 cut(s) | 627 |
| Eco31I | GGTCTC | 1 cut(s) | 785 |
| EcoRI | GAATTC | 1 cut(s) | 60 |
| EcoRII | CCWGG | 4 cut(s) | 145, 160, 315, 394 |
| FaeI | CATG | 3 cut(s) | 77, 415, 494 |
| FalI | AAGNNNNNCTT | 3 cut(s) | 286, 318, 896 |
| FaqI | GGGAC | 1 cut(s) | 81 |
| FatI | CATG | 3 cut(s) | 73, 411, 490 |
| Fnu4HI | GCNGC | 5 cut(s) | 760, 810, 825, 828, 840 |
| FokI | GGATG | 2 cut(s) | 28, 803 |
| Fsp4HI | GCNGC | 5 cut(s) | 760, 810, 825, 828, 840 |
| FspBI | CTAG | 2 cut(s) | 306, 878 |
| GluI | GCNGC | 5 cut(s) | 760, 810, 825, 828, 840 |
| HaeIII | GGCC | 1 cut(s) | 165 |
| Hin1II | CATG | 3 cut(s) | 77, 415, 494 |
| HincII | GTYRAC | 4 cut(s) | 423, 624, 642, 897 |
| HindII | GTYRAC | 4 cut(s) | 423, 624, 642, 897 |
| HindIII | AAGCTT | 1 cut(s) | 905 |
| HinfI | GANTC | 5 cut(s) | 92, 240, 442, 674, 857 |
| HpaI | GTTAAC | 3 cut(s) | 423, 624, 897 |
| HphI | GGTGA | 1 cut(s) | 737 |
| Hpy166II | GTNNAC | 4 cut(s) | 423, 624, 642, 897 |
| Hpy188I | TCNGA | 7 cut(s) | 15, 239, 245, 280, 631, 785, 862 |
| Hpy8I | GTNNAC | 4 cut(s) | 423, 624, 642, 897 |
| Hpy99I | CGWCG | 1 cut(s) | 290 |
| HpyAV | CCTTC | 3 cut(s) | 231, 692, 787 |
| HpyCH4III | ACNGT | 2 cut(s) | 389, 682 |
| HpyCH4V | TGCA | 6 cut(s) | 21, 73, 113, 272, 494, 740 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 768, 836 |
| HpyF3I | CTNAG | 1 cut(s) | 782 |
| Hsp92II | CATG | 3 cut(s) | 77, 415, 494 |
| KspAI | GTTAAC | 3 cut(s) | 423, 624, 897 |
| Kzo9I | GATC | 4 cut(s) | 460, 727, 772, 862 |
| LmnI | GCTCC | 1 cut(s) | 194 |
| Lsp1109I | GCAGC | 4 cut(s) | 771, 796, 814, 826 |
| LweI | GCATC | 1 cut(s) | 749 |
| MaeI | CTAG | 2 cut(s) | 306, 878 |
| MaeIII | GTNAC | 2 cut(s) | 35, 311 |
| MalI | GATC | 4 cut(s) | 462, 729, 774, 864 |
| MboI | GATC | 4 cut(s) | 460, 727, 772, 862 |
| MboII | GAAGA | 8 cut(s) | 134, 250, 294, 368, 419, 563, 722, 725 |
| MhlI | GDGCHC | 1 cut(s) | 801 |
| MluCI | AATT | 5 cut(s) | 45, 60, 167, 273, 330 |
| MlyI | GAGTC | 2 cut(s) | 86, 851 |
| MnlI | CCTC | 7 cut(s) | 98, 202, 205, 239, 709, 744, 847 |
| MseI | TTAA | 6 cut(s) | 206, 252, 333, 422, 623, 896 |
| MslI | CAYNNNNRTG | 3 cut(s) | 14, 54, 78 |
| MspA1I | CMGCKG | 1 cut(s) | 827 |
| MspR9I | CCNGG | 4 cut(s) | 147, 162, 317, 396 |
| MvaI | CCWGG | 4 cut(s) | 147, 162, 317, 396 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 768, 836 |
| NdeII | GATC | 4 cut(s) | 460, 727, 772, 862 |
| NlaIII | CATG | 3 cut(s) | 77, 415, 494 |
| NlaIV | GGNNCC | 1 cut(s) | 190 |
| NmuCI | GTSAC | 1 cut(s) | 311 |
| NspI | RCATGY | 1 cut(s) | 494 |
| PfeI | GAWTC | 3 cut(s) | 240, 442, 674 |
| PfoI | TCCNGGA | 1 cut(s) | 145 |
| PkrI | GCNGC | 5 cut(s) | 761, 811, 826, 829, 841 |
| Ple19I | CGATCG | 1 cut(s) | 775 |
| PleI | GAGTC | 2 cut(s) | 86, 851 |
| PpsI | GAGTC | 2 cut(s) | 86, 851 |
| Psp6I | CCWGG | 4 cut(s) | 145, 160, 315, 394 |
| PspGI | CCWGG | 4 cut(s) | 145, 160, 315, 394 |
| PspN4I | GGNNCC | 1 cut(s) | 190 |
| PstNI | CAGNNNCTG | 1 cut(s) | 70 |
| PvuI | CGATCG | 1 cut(s) | 775 |
| RsaI | GTAC | 3 cut(s) | 88, 537, 565 |
| RsaNI | GTAC | 3 cut(s) | 87, 536, 564 |
| RseI | CAYNNNNRTG | 3 cut(s) | 14, 54, 78 |
| SaqAI | TTAA | 6 cut(s) | 206, 252, 333, 422, 623, 896 |
| SatI | GCNGC | 5 cut(s) | 760, 810, 825, 828, 840 |
| Sau3AI | GATC | 4 cut(s) | 460, 727, 772, 862 |
| SchI | GAGTC | 2 cut(s) | 86, 851 |
| ScrFI | CCNGG | 4 cut(s) | 147, 162, 317, 396 |
| SduI | GDGCHC | 1 cut(s) | 801 |
| SfaNI | GCATC | 1 cut(s) | 749 |
| SfcI | CTRYAG | 1 cut(s) | 681 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 14, 54, 78 |
| Sse9I | AATT | 5 cut(s) | 45, 60, 167, 273, 330 |
| SsiI | CCGC | 2 cut(s) | 612, 825 |
| SspMI | CTAG | 2 cut(s) | 306, 878 |
| StyD4I | CCNGG | 4 cut(s) | 145, 160, 315, 394 |
| TaaI | ACNGT | 2 cut(s) | 389, 682 |
| TaqI | TCGA | 2 cut(s) | 103, 852 |
| TasI | AATT | 5 cut(s) | 45, 60, 167, 273, 330 |
| TatI | WGTACW | 2 cut(s) | 86, 535 |
| TauI | GCSGC | 1 cut(s) | 827 |
| TfiI | GAWTC | 3 cut(s) | 240, 442, 674 |
| Tru1I | TTAA | 6 cut(s) | 206, 252, 333, 422, 623, 896 |
| Tru9I | TTAA | 6 cut(s) | 206, 252, 333, 422, 623, 896 |
| TscAI | CASTG | 3 cut(s) | 613, 726, 841 |
| TseFI | GTSAC | 1 cut(s) | 311 |
| TseI | GCWGC | 4 cut(s) | 759, 809, 827, 839 |
| Tsp45I | GTSAC | 1 cut(s) | 311 |
| TspDTI | ATGAA | 6 cut(s) | 38, 250, 306, 369, 681, 723 |
| TspRI | CASTG | 3 cut(s) | 613, 726, 841 |
| XapI | RAATTY | 1 cut(s) | 60 |
| XceI | RCATGY | 1 cut(s) | 494 |
| XspI | CTAG | 2 cut(s) | 306, 878 |