TMV resistance protein N-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 311 |
| AclWI | GGATC | 3 cut(s) | 50, 266, 275 |
| AfaI | GTAC | 1 cut(s) | 250 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 412 |
| AgsI | TTSAA | 2 cut(s) | 11, 400 |
| AjnI | CCWGG | 1 cut(s) | 344 |
| AluBI | AGCT | 1 cut(s) | 220 |
| AluI | AGCT | 1 cut(s) | 220 |
| Alw21I | GWGCWC | 2 cut(s) | 234, 321 |
| Alw26I | GTCTC | 1 cut(s) | 172 |
| AlwI | GGATC | 3 cut(s) | 50, 266, 275 |
| AoxI | GGCC | 3 cut(s) | 49, 386, 560 |
| ApeKI | GCWGC | 3 cut(s) | 464, 467, 524 |
| AspS9I | GGNCC | 2 cut(s) | 50, 561 |
| AsuHPI | GGTGA | 1 cut(s) | 300 |
| BbsI | GAAGAC | 1 cut(s) | 523 |
| Bbv12I | GWGCWC | 2 cut(s) | 234, 321 |
| BbvI | GCAGC | 3 cut(s) | 476, 479, 511 |
| BccI | CCATC | 3 cut(s) | 498, 501, 575 |
| BceAI | ACGGC | 1 cut(s) | 512 |
| BciT130I | CCWGG | 1 cut(s) | 346 |
| BclI | TGATCA | 1 cut(s) | 451 |
| BcoDI | GTCTC | 1 cut(s) | 172 |
| BfaI | CTAG | 1 cut(s) | 515 |
| BfmI | CTRYAG | 1 cut(s) | 382 |
| BisI | GCNGC | 3 cut(s) | 465, 468, 525 |
| BlsI | GCNGC | 3 cut(s) | 466, 469, 526 |
| Bme1390I | CCNGG | 1 cut(s) | 346 |
| BmgT120I | GGNCC | 2 cut(s) | 50, 561 |
| BmiI | GGNNCC | 1 cut(s) | 563 |
| BmrFI | CCNGG | 1 cut(s) | 346 |
| BpiI | GAAGAC | 1 cut(s) | 523 |
| BpmI | CTGGAG | 2 cut(s) | 252, 335 |
| BsaBI | GATNNNNATC | 1 cut(s) | 450 |
| BsaI | GGTCTC | 1 cut(s) | 172 |
| BsaJI | CCNNGG | 1 cut(s) | 64 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 138, 168 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 412 |
| Bse8I | GATNNNNATC | 1 cut(s) | 450 |
| BseBI | CCWGG | 1 cut(s) | 346 |
| BseDI | CCNNGG | 1 cut(s) | 64 |
| BseGI | GGATG | 1 cut(s) | 509 |
| BseJI | GATNNNNATC | 1 cut(s) | 450 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 412 |
| BseMII | CTCAG | 1 cut(s) | 587 |
| BseRI | GAGGAG | 2 cut(s) | 96, 99 |
| BseXI | GCAGC | 3 cut(s) | 476, 479, 511 |
| BshFI | GGCC | 3 cut(s) | 51, 388, 562 |
| BsiHKAI | GWGCWC | 2 cut(s) | 234, 321 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 412 |
| BsmAI | GTCTC | 1 cut(s) | 172 |
| BsnI | GGCC | 3 cut(s) | 51, 388, 562 |
| Bso31I | GGTCTC | 1 cut(s) | 172 |
| Bsp1286I | GDGCHC | 2 cut(s) | 234, 321 |
| Bsp143I | GATC | 5 cut(s) | 42, 271, 280, 451, 552 |
| BspACI | CCGC | 1 cut(s) | 311 |
| BspANI | GGCC | 3 cut(s) | 51, 388, 562 |
| BspCNI | CTCAG | 1 cut(s) | 586 |
| BspHI | TCATGA | 1 cut(s) | 168 |
| BspLI | GGNNCC | 1 cut(s) | 563 |
| BspPI | GGATC | 3 cut(s) | 50, 266, 275 |
| BspQI | GCTCTTC | 1 cut(s) | 426 |
| BspTNI | GGTCTC | 1 cut(s) | 172 |
| BssECI | CCNNGG | 1 cut(s) | 64 |
| BssMI | GATC | 5 cut(s) | 42, 271, 280, 451, 552 |
| Bst2UI | CCWGG | 1 cut(s) | 346 |
| Bst4CI | ACNGT | 2 cut(s) | 65, 591 |
| Bst6I | CTCTTC | 1 cut(s) | 426 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 489 |
| BstDEI | CTNAG | 1 cut(s) | 573 |
| BstDSI | CCRYGG | 1 cut(s) | 64 |
| BstF5I | GGATG | 1 cut(s) | 509 |
| BstKTI | GATC | 5 cut(s) | 45, 274, 283, 454, 555 |
| BstMAI | GTCTC | 1 cut(s) | 172 |
| BstMBI | GATC | 5 cut(s) | 42, 271, 280, 451, 552 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 489 |
| BstNI | CCWGG | 1 cut(s) | 346 |
| BstSCI | CCNGG | 1 cut(s) | 344 |
| BstSFI | CTRYAG | 1 cut(s) | 382 |
| BstV1I | GCAGC | 3 cut(s) | 476, 479, 511 |
| BstV2I | GAAGAC | 1 cut(s) | 523 |
| BstX2I | RGATCY | 2 cut(s) | 42, 271 |
| BstYI | RGATCY | 2 cut(s) | 42, 271 |
| BsuRI | GGCC | 3 cut(s) | 51, 388, 562 |
| BtgI | CCRYGG | 1 cut(s) | 64 |
| BtsCI | GGATG | 1 cut(s) | 509 |
| BtsI | GCAGTG | 1 cut(s) | 519 |
| BtsIMutI | CAGTG | 1 cut(s) | 519 |
| CciI | TCATGA | 1 cut(s) | 168 |
| Cfr13I | GGNCC | 2 cut(s) | 50, 561 |
| Csp6I | GTAC | 1 cut(s) | 249 |
| CviAII | CATG | 3 cut(s) | 96, 169, 412 |
| CviJI | RGCY | 6 cut(s) | 51, 105, 220, 388, 514, 562 |
| CviKI_1 | RGCY | 6 cut(s) | 51, 105, 220, 388, 514, 562 |
| CviQI | GTAC | 1 cut(s) | 249 |
| DdeI | CTNAG | 1 cut(s) | 573 |
| DpnI | GATC | 5 cut(s) | 44, 273, 282, 453, 554 |
| DpnII | GATC | 5 cut(s) | 42, 271, 280, 451, 552 |
| Eam1104I | CTCTTC | 1 cut(s) | 426 |
| EarI | CTCTTC | 1 cut(s) | 426 |
| Eco31I | GGTCTC | 1 cut(s) | 172 |
| EcoRII | CCWGG | 1 cut(s) | 344 |
| FaeI | CATG | 3 cut(s) | 99, 172, 415 |
| FaiI | YATR | 7 cut(s) | 35, 48, 61, 97, 170, 323, 413 |
| FatI | CATG | 3 cut(s) | 95, 168, 411 |
| FbaI | TGATCA | 1 cut(s) | 451 |
| Fnu4HI | GCNGC | 3 cut(s) | 465, 468, 525 |
| FokI | GGATG | 1 cut(s) | 516 |
| Fsp4HI | GCNGC | 3 cut(s) | 465, 468, 525 |
| FspBI | CTAG | 1 cut(s) | 515 |
| GluI | GCNGC | 3 cut(s) | 465, 468, 525 |
| GsuI | CTGGAG | 2 cut(s) | 252, 335 |
| HaeIII | GGCC | 3 cut(s) | 51, 388, 562 |
| Hin1II | CATG | 3 cut(s) | 99, 172, 415 |
| HinfI | GANTC | 1 cut(s) | 416 |
| HphI | GGTGA | 1 cut(s) | 300 |
| Hpy188I | TCNGA | 4 cut(s) | 126, 421, 552, 576 |
| Hpy188III | TCNNGA | 3 cut(s) | 169, 269, 327 |
| Hpy99I | CGWCG | 1 cut(s) | 178 |
| HpyCH4III | ACNGT | 2 cut(s) | 65, 591 |
| HpyCH4V | TGCA | 2 cut(s) | 226, 464 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 489 |
| HpyF3I | CTNAG | 1 cut(s) | 573 |
| Hsp92II | CATG | 3 cut(s) | 99, 172, 415 |
| Ksp22I | TGATCA | 1 cut(s) | 451 |
| Kzo9I | GATC | 5 cut(s) | 42, 271, 280, 451, 552 |
| LguI | GCTCTTC | 1 cut(s) | 426 |
| LmnI | GCTCC | 1 cut(s) | 316 |
| LpnPI | CCDG | 7 cut(s) | 195, 282, 299, 312, 331, 358, 482 |
| Lsp1109I | GCAGC | 3 cut(s) | 476, 479, 511 |
| MaeI | CTAG | 1 cut(s) | 515 |
| MaeIII | GTNAC | 3 cut(s) | 17, 306, 517 |
| MalI | GATC | 5 cut(s) | 44, 273, 282, 453, 554 |
| MboI | GATC | 5 cut(s) | 42, 271, 280, 451, 552 |
| MboII | GAAGA | 4 cut(s) | 342, 440, 443, 523 |
| MflI | RGATCY | 2 cut(s) | 42, 271 |
| MhlI | GDGCHC | 2 cut(s) | 234, 321 |
| MluCI | AATT | 1 cut(s) | 459 |
| MlyI | GAGTC | 1 cut(s) | 425 |
| MnlI | CCTC | 8 cut(s) | 65, 74, 77, 416, 465, 473, 494, 501 |
| MspA1I | CMGCKG | 1 cut(s) | 313 |
| MspR9I | CCNGG | 1 cut(s) | 346 |
| MvaI | CCWGG | 1 cut(s) | 346 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 489 |
| NdeII | GATC | 5 cut(s) | 42, 271, 280, 451, 552 |
| NlaIII | CATG | 3 cut(s) | 99, 172, 415 |
| NlaIV | GGNNCC | 1 cut(s) | 563 |
| NmuCI | GTSAC | 2 cut(s) | 306, 517 |
| PagI | TCATGA | 1 cut(s) | 168 |
| PciSI | GCTCTTC | 1 cut(s) | 426 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 61 |
| PkrI | GCNGC | 3 cut(s) | 466, 469, 526 |
| PleI | GAGTC | 1 cut(s) | 424 |
| PpsI | GAGTC | 1 cut(s) | 424 |
| Psp6I | CCWGG | 1 cut(s) | 344 |
| PspGI | CCWGG | 1 cut(s) | 344 |
| PspN4I | GGNNCC | 1 cut(s) | 563 |
| PspPI | GGNCC | 2 cut(s) | 50, 561 |
| PsuI | RGATCY | 2 cut(s) | 42, 271 |
| RsaI | GTAC | 1 cut(s) | 250 |
| RsaNI | GTAC | 1 cut(s) | 249 |
| SapI | GCTCTTC | 1 cut(s) | 426 |
| SatI | GCNGC | 3 cut(s) | 465, 468, 525 |
| Sau3AI | GATC | 5 cut(s) | 42, 271, 280, 451, 552 |
| Sau96I | GGNCC | 2 cut(s) | 50, 561 |
| SchI | GAGTC | 1 cut(s) | 425 |
| ScrFI | CCNGG | 1 cut(s) | 346 |
| SduI | GDGCHC | 2 cut(s) | 234, 321 |
| SetI | ASST | 2 cut(s) | 184, 222 |
| SfcI | CTRYAG | 1 cut(s) | 382 |
| Sse9I | AATT | 1 cut(s) | 459 |
| SsiI | CCGC | 1 cut(s) | 311 |
| SspI | AATATT | 2 cut(s) | 7, 135 |
| SspMI | CTAG | 1 cut(s) | 515 |
| StyD4I | CCNGG | 1 cut(s) | 344 |
| TaaI | ACNGT | 2 cut(s) | 65, 591 |
| TaqI | TCGA | 2 cut(s) | 70, 351 |
| TasI | AATT | 1 cut(s) | 459 |
| TscAI | CASTG | 1 cut(s) | 526 |
| TseFI | GTSAC | 2 cut(s) | 306, 517 |
| TseI | GCWGC | 3 cut(s) | 464, 467, 524 |
| Tsp45I | GTSAC | 2 cut(s) | 306, 517 |
| TspDTI | ATGAA | 5 cut(s) | 17, 50, 165, 369, 380 |
| TspGWI | ACGGA | 2 cut(s) | 131, 154 |
| TspRI | CASTG | 1 cut(s) | 526 |
| XspI | CTAG | 1 cut(s) | 515 |