pycom17g07220

TMV resistance protein

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
Physical Location & Seq
Forward (+)
5175196 .. 5177923
2728 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom17g07220.4

Sequence Viewer

Length: 2127 bp
ATGCGTCATAGCTGCTTGAGACAAGTTTGGAAGGGAACAAAGTGCCTTCCATCTTTAAAGATCCTTGATCTTAGTCATTCTCATGACCTTAGAGAAAGTGTTGCTGACTTCTCACTTTTCCCCAATTTAGAAAAACTGATTCTTGTAGATTGTCGGAATCTGATTGATGTCCATGAATCCATTGAAAGCCTAGAGAAACTTGTTTACTTGAATATGAAGGATTGCAAAAGTATTAGGATGTTGAACAAGAACATTGGTAAGCTCAAGTTACTCAAAACACTCATTATATCTGGTTGTTCGAAACTTAACGAGTCTTCACTGGACATGATGAGGAACATGGAGTCTCTGAAAGTGCTTGAAGCAGATGAAATTCCAGTGAATCAAGTACTTGCTGCTGGTGGGCAGTTGATTGAATCTTGGCCTGCGAGAAGTTCATATATTTTTTGGACCTCTTTACCATCTTCTTTAGTATCTTTAAGTCTTAGCGGGCGCAATCTCTCGAATGAAGATTTTCCAATGGAACTTGGTAATCTATCTTCCTTGGAAAAATTAAATCTACAGTCCACTTCAGTTTGTAGCCTACCAAGTTGCATCAAAGGGCTAAAGAAGCTTTGTGAACTCAACTTTGGCGGGTGCAAGAGTCTTAAAGAACTTGTGGGGCTACCAAAAGTGAAGCATGTGTTTGTGACTGATTGCACATCATTGGAAAAGGTAACATATGATTCATTTTCATCCTACAAAAATAGTTTAGTCTTGTTTCGTCACAACCGCAGCCTAGTTGAGGCGGAGTATACGTTCAGACTAGAACCCATTGGAAAAGTTGATACAGAAATGATCAACCTGTTGGAATTGCGCAATTACTTGGAATCCACAGCAACCATTAAGATGCACGTCCCATTTTCATATGGAAAGATTTCGCAAGACTATGAGTCTCGTCCCATCCAGGGACTGTATGAATATGGTATATTCAGCACATTTCTTCCAGGGAATCAGGTTCCAGGTCGATTTGGCCATAGAAGTAGTGATGCAGGAACCTCAATATCCTTTAGAGTGCCTTCACTGCCTCCAAATTATGTAATTCAAGGCTTGAACATCTTTGCTGTCTATGCACTTTCCGAACATTCTTCTTTTTGTGTATTCGATAATCCATTATTTAAGAAAGTATGGAATAAGAGCAAGAGTCTAAAGTGGATTTATAACCCACAAGTGTATGGGATTCCCAGGGAGGGAGAAGACATGGTATGGTTAAGCCATTGGAAGTTGGAAGGTGAGTTATTAGGTGGCAATGAAGTTGTTGTTTCAGTGTTTATGCAACCAGGTGTGTTTCACTTGAAGGAGTTTGGCGTCCAGCTTGTGTGTGAAAAACACGAAAATAATAGTACGAGTACGCAACACAACACGTGGACGGATCCTTATTATCCACGTGTCATCGGAGGAGATTTGTCATCACGTGAGGCGACAAAAGGAACGTATTGGCTCTGCTGGAGAGCACACTCACCTGAAGCTATTGCTTGGTTCGATTACCTCGATAGGGACTTTGATGATCATGAATTAGATACAGTGACGCAACTTGGAGAAGAGGAAGAGGAAAAGGAAGAAGAAGAAGAGGAAGAGGAAGAGGAAGAAGAAGAGCAACTGCAGGATGATCCCATGCTTCTTCCAGCAGCAACAGGCAGACTTCCCTCAGATTCAGAAGATGAAAATAATGGCTCAAAGAACGACATAGAAATATCCGAGAGTTCAAAGAAGGGATCTCAAGGTAATGACAACGATGTTCATTCAGCTGCAAAAGATGTTGCAGATGAAGAATTGATGCAATGCTTGGGAATTTTGAACAACATGGAGGAACTTGACGATGATACTTATTCAAAAGCTTTGAAGCTTTTCCACGACGATGCAACTTGGAGAAAGCTATTTGTGAGCATGCCTGATAAGAGGAAGAAACCTTTTATCCTCGGGCTTGGTTCACGTAAAGATTCAGCAGCAACCAGGGCAGGTGGCCGAAACAACTCATTTGGTGGTCTGAGAGGCTGGAATGTATTCATGTTCGCTTCGGCTGCCTTCTTTCTCTTCGCTCTCTATCTGCTTGCTCTCAGCTTCCTCAGCTATGAAAGAAGACGCGTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

709

Amino Acids

80.31

Weight (kDa)

5.26

Isoelectric Point (pI)

45.19

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000036)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G57630 AT1G72930 AT5G38344
fragaria_vesca FvH4_1g27020 FvH4_2g00931 FvH4_2g17330 FvH4_2g17330 FvH4_2g17340 FvH4_2g17350 FvH4_2g20690 FvH4_5g15301 FvH4_5g34194 FvH4_5g38530 FvH4_5g38740 FvH4_5g38740 FvH4_5g38740 FvH4_6g03800 FvH4_7g09791 FvH4_7g09800 FvH4_7g09800 FvH4_7g10510 FvH4_7g10520 FvH4_7g10520 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750
malus_domestica MD02G1217100.v1.1 MD02G1217200.v1.1 MD02G1217400.v1.1 MD02G1217600.v1.1 MD02G1264800.v1.1 MD02G1264900.v1.1 MD02G1302100.v1.1 MD04G1010700.v1.1 MD05G1006800.v1.1 MD05G1140100.v1.1 MD05G1140200.v1.1 MD05G1152200.v1.1 MD07G1073500.v1.1 MD07G1101700.v1.1 MD07G1102200.v1.1 MD07G1103200.v1.1 MD07G1112300.v1.1 MD08G1018200.v1.1 MD08G1018400.v1.1 MD08G1018800.v1.1 MD08G1019000.v1.1 MD08G1019100.v1.1 MD08G1019200.v1.1 MD08G1019300.v1.1 MD08G1019400.v1.1 MD08G1019600.v1.1 MD08G1019900.v1.1 MD08G1020000.v1.1 MD08G1020200.v1.1 MD08G1020500.v1.1 MD08G1020700.v1.1 MD08G1020800.v1.1 MD08G1040700.v1.1 MD11G1112400.v1.1 MD12G1068600.v1.1 MD12G1193200.v1.1 MD13G1050600.v1.1 MD15G1374900.v1.1 MD15G1375100.v1.1 MD15G1416500.v1.1 MD17G1072500.v1.1 MD17G1274200.v1.1 MD17G1274900.v1.1
prunus_persica Prupe.2G121000_v2.0.a1 Prupe.2G121000_v2.0.a1 Prupe.2G125800_v2.0.a1 Prupe.2G126000_v2.0.a1 Prupe.2G126100_v2.0.a1 Prupe.2G126200_v2.0.a1 Prupe.2G126300_v2.0.a1 Prupe.2G126400_v2.0.a1 Prupe.2G126500_v2.0.a1 Prupe.2G126600_v2.0.a1 Prupe.2G126700_v2.0.a1 Prupe.2G126700_v2.0.a1 Prupe.2G126800_v2.0.a1 Prupe.2G126900_v2.0.a1 Prupe.2G127000_v2.0.a1 Prupe.2G127000_v2.0.a1 Prupe.2G127000_v2.0.a1 Prupe.2G127000_v2.0.a1 Prupe.2G135500_v2.0.a1 Prupe.2G135600_v2.0.a1 Prupe.2G135700_v2.0.a1 Prupe.2G135700_v2.0.a1 Prupe.3G009800_v2.0.a1 Prupe.3G010200_v2.0.a1 Prupe.3G131000_v2.0.a1 Prupe.4G260800_v2.0.a1 Prupe.4G260900_v2.0.a1 Prupe.6G083100_v2.0.a1 Prupe.6G083200_v2.0.a1 Prupe.6G083400_v2.0.a1 Prupe.6G132100_v2.0.a1 Prupe.8G184900_v2.0.a1 Prupe.8G185200_v2.0.a1 Prupe.8G185300_v2.0.a1
pyrus_communis pycom02g17870 pycom02g17880 pycom02g19520 pycom02g22610 pycom02g22630 pycom02g22680 pycom05g13540 pycom05g14680 pycom07g04880 pycom07g04890 pycom07g05690 pycom07g05710 pycom07g05720 pycom07g05750 pycom07g05780 pycom07g06300 pycom07g08320 pycom07g08330 pycom07g08350 pycom07g08360 pycom07g08370 pycom07g08410 pycom07g08420 pycom07g08430 pycom07g08440 pycom07g08470 pycom07g08480 pycom07g08520 pycom07g08550 pycom07g08560 pycom07g08640 pycom07g08660 pycom07g08670 pycom07g08680 pycom07g08690 pycom07g08720 pycom07g08730 pycom07g08790 pycom07g08800 pycom07g08810 pycom07g08860 pycom07g08890 pycom07g09720 pycom08g01590 pycom08g01600 pycom08g01620 pycom08g01630 pycom08g01640 pycom10g12630 pycom15g16490 pycom17g07200 pycom17g07210 pycom17g07220 pycom17g11730 pycom17g11740 pycom17g27340 pycom17g27380
rosa_chinensis RchiOBHm_Chr1g0342571 RchiOBHm_Chr1g0346231 RchiOBHm_Chr1g0346831 RchiOBHm_Chr1g0346891 RchiOBHm_Chr1g0348311 RchiOBHm_Chr1g0348321 RchiOBHm_Chr1g0348331 RchiOBHm_Chr1g0348361 RchiOBHm_Chr1g0348371 RchiOBHm_Chr1g0348381 RchiOBHm_Chr1g0348401 RchiOBHm_Chr1g0348411 RchiOBHm_Chr1g0348421 RchiOBHm_Chr1g0348431 RchiOBHm_Chr2g0130881 RchiOBHm_Chr3g0487331 RchiOBHm_Chr5g0060371 RchiOBHm_Chr6g0246491 RchiOBHm_Chr6g0246871 RchiOBHm_Chr6g0250311 RchiOBHm_Chr6g0250781 RchiOBHm_Chr6g0251431 RchiOBHm_Chr6g0281871 RchiOBHm_Chr6g0281881 RchiOBHm_Chr6g0281931 RchiOBHm_Chr6g0281941 RchiOBHm_Chr6g0281951 RchiOBHm_Chr6g0281971 RchiOBHm_Chr6g0281981 RchiOBHm_Chr7g0240541 RchiOBHm_Chr7g0240631 RchiOBHm_Chr7g0240671
rosa_laevigata RLG00000000627 RLG00000000631 RLG00000000641 RLG00000000645 RLG00000000652 RLG00000000662 RLG00000000663 RLG00000000667 RLG00000000670 RLG00000000702 RLG00000001216 RLG00000001219 RLG00000007678 RLG00000012923 RLG00000012996 RLG00000013243 RLG00000017513 RLG00000017514 RLG00000020936 RLG00000022755 RLG00000023013 RLG00000028646 RLG00000028654 RLG00000028662 RLG00000028665 RLG00000028667 RLG00000028711 RLG00000028714 RLG00000028716 RLG00000028770 RLG00000028771 RLG00000028773 RLG00000028778 RLG00000028798 RLG00000028809 RLG00000028813 RLG00000029334 RLG00000030003 RLG00000033910 RLG00000034358 RLG00000035430
rosa_multiflora Rmu_co8031134.1_g000001 Rmu_co8092796.1_g000001 Rmu_co8130156.1_g000001 Rmu_co8325323.1_g000001 Rmu_co8424083.1_g000002 Rmu_sc0000008.1_g000003 Rmu_sc0000008.1_g000011 Rmu_sc0000008.1_g000015 Rmu_sc0000008.1_g000020 Rmu_sc0000091.1_g000015 Rmu_sc0000091.1_g000018 Rmu_sc0000091.1_g000029 Rmu_sc0000091.1_g000031 Rmu_sc0000391.1_g000004 Rmu_sc0001070.1_g000030 Rmu_sc0001293.1_g000016 Rmu_sc0001674.1_g000006 Rmu_sc0001731.1_g000002 Rmu_sc0001731.1_g000003 Rmu_sc0001731.1_g000005 Rmu_sc0001911.1_g000029 Rmu_sc0001913.1_g000038 Rmu_sc0001955.1_g000025 Rmu_sc0001992.1_g000022 Rmu_sc0001992.1_g000028 Rmu_sc0001992.1_g000031 Rmu_sc0002517.1_g000013 Rmu_sc0002517.1_g000017 Rmu_sc0002551.1_g000022 Rmu_sc0002551.1_g000029 Rmu_sc0002551.1_g000038 Rmu_sc0002705.1_g000015 Rmu_sc0002705.1_g000016 Rmu_sc0002882.1_g000055 Rmu_sc0003232.1_g000027 Rmu_sc0003363.1_g000037 Rmu_sc0003600.1_g000054 Rmu_sc0003918.1_g000011 Rmu_sc0004395.1_g000011 Rmu_sc0005071.1_g000004 Rmu_sc0005255.1_g000018 Rmu_sc0005327.1_g000004 Rmu_sc0005597.1_g000007 Rmu_sc0007060.1_g000007 Rmu_sc0007310.1_g000003 Rmu_sc0007383.1_g000014 Rmu_sc0007799.1_g000003 Rmu_sc0008477.1_g000016 Rmu_sc0010151.1_g000009 Rmu_sc0011217.1_g000005 Rmu_sc0016269.1_g000006 Rmu_sc0021495.1_g000001 Rmu_sc0027364.1_g000001 Rmu_sc0029432.1_g000001 Rmu_sc0041386.1_g000001 Rmu_ssc0000126.1_g000023 Rmu_ssc0000126.1_g000027
rosa_roxburghii Rroxscaffold_1G00006130 Rroxscaffold_1G00023320 Rroxscaffold_1G00038770 Rroxscaffold_2G00119800 Rroxscaffold_2G00121860 Rroxscaffold_3G00219780 Rroxscaffold_3G00219890 Rroxscaffold_4G00306740 Rroxscaffold_4G00306820 Rroxscaffold_4G00307000 Rroxscaffold_4G00307010 Rroxscaffold_4G00307020 Rroxscaffold_4G00308030 Rroxscaffold_4G00308070 Rroxscaffold_4G00308450 Rroxscaffold_4G00308460 Rroxscaffold_4G00315320 Rroxscaffold_5G00352470 Rroxscaffold_5G00371420 Rroxscaffold_6G00392300 Rroxscaffold_6G00394870 Rroxscaffold_6G00394890 Rroxscaffold_7G00186700 Rroxscaffold_7G00194980 Rroxscaffold_7G00216840
rosa_rugosa Rorug01G0076100 Rorug01G0128100 Rorug01G0149000.1 Rorug01G0149500.1 Rorug01G0180000 Rorug01G0180100 Rorug01G0182900 Rorug01G0184000 Rorug01G0184100 Rorug01G0184300 Rorug01G0184600 Rorug01G0184700 Rorug01G0184700 Rorug01G0184900 Rorug01G0185000 Rorug01G0185100 Rorug01G0189300 Rorug01G0194100 Rorug01G0194100 Rorug01G0194200 Rorug01G0194400 Rorug01G0194400 Rorug01G0194500 Rorug02G0090400 Rorug02G0090400 Rorug03G0233000 Rorug03G0233100 Rorug05G0178600 Rorug05G0178700 Rorug05G0579200 Rorug06G0144100 Rorug06G0144300 Rorug06G0144300 Rorug06G0179300 Rorug06G0208800 Rorug07G0323500 Rorug07G0337000
rosa_samantha Rh1AG046100 Rh1AG201400 Rh1AG201800 Rh1AG202100 Rh1AG202600 Rh1AG211500 Rh1AG211800 Rh1AG212200 Rh1AG212500 Rh1AG212600 Rh1AG214200 Rh1BG168000 Rh1BG168300 Rh1BG168500 Rh1BG177900 Rh1BG178200 Rh1BG178300 Rh1BG178800 Rh1BG178900 Rh1CG080900 Rh1CG183300 Rh1CG186300 Rh1CG186700 Rh1CG187000 Rh1CG187300 Rh1CG193400 Rh1CG195800 Rh1CG196000 Rh1CG196100 Rh1CG196400 Rh1CG196500 Rh1CG196800 Rh1CG198800 Rh1CG442600 Rh1DG086200 Rh1DG155400 Rh1DG156200 Rh1DG194000 Rh1DG194300 Rh1DG194900 Rh1DG197000 Rh1DG198800 Rh1DG199000 Rh1DG199200 Rh1DG202000 Rh1DG203900 Rh1DG207600 Rh1DG207900 Rh1DG208000 Rh1DG208500 Rh1DG208600 Rh1DG208700 Rh3CG339100 Rh5AG106500 Rh5AG264800 Rh5AG265300 Rh5CG302800 Rh5DG277900 Rh6AG257600 Rh6AG257700 Rh6BG260500 Rh6BG260700 Rh6CG259600 Rh6CG259700 Rh6DG252100 Rh7DG126900
rosa_wichuraiana Rw0G005780 Rw0G007540 Rw0G007550 Rw0G007560 Rw0G009390 Rw1G016900 Rw1G016930 Rw1G016940 Rw1G016970 Rw1G017860 Rw1G017890 Rw1G017900 Rw1G017910 Rw1G017920 Rw1G017960 Rw1G017970 Rw1G017980 Rw1G018150 Rw4G000830 Rw5G009290 Rw5G018950 Rw5G024850 Rw5G024870 Rw5G040460 Rw6G022290 Rw7G041020 Rw7G041200 Rw7G041360 Rw7G041450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1197
AarI CACCTGC 1 cut(s) 1985
Acc16I TGCGCA 1 cut(s) 854
Acc36I ACCTGC 1 cut(s) 1985
AccI GTMKAC 1 cut(s) 791
AccII CGCG 1 cut(s) 2121
AciI CCGC 4 cut(s) 486, 630, 769, 785
AclWI GGATC 5 cut(s) 55, 1403, 1416, 1640, 1759
AcoI YGGCCR 2 cut(s) 1009, 1999
AcsI RAATTY 2 cut(s) 369, 1827
AcuI CTGAAG 2 cut(s) 552, 1521
AcvI CACGTG 3 cut(s) 1401, 1424, 1451
AcyI GRCGYC 1 cut(s) 1344
AfaI GTAC 3 cut(s) 387, 1381, 1387
AfiI CCNNNNNNNGG 4 cut(s) 781, 944, 1226, 1531
AflIII ACRYGT 3 cut(s) 1398, 1423, 2119
AhdI GACNNNNNGTC 1 cut(s) 928
AjiI CACGTC 1 cut(s) 892
AjnI CCWGG 6 cut(s) 942, 982, 997, 1220, 1315, 1988
AjuI GAANNNNNNNTTGG 2 cut(s) 609, 641
AloI GAACNNNNNNTCC 2 cut(s) 779, 811
Alw21I GWGCWC 1 cut(s) 1492
Alw26I GTCTC 3 cut(s) 13, 348, 936
AlwI GGATC 5 cut(s) 55, 1403, 1416, 1640, 1759
AlwNI CAGNNNCTG 1 cut(s) 949
Ama87I CYCGRG 1 cut(s) 1955
AoxI GGCC 3 cut(s) 419, 1009, 1999
ApeKI GCWGC 7 cut(s) 12, 392, 771, 1664, 1784, 1982, 2057
ApoI RAATTY 2 cut(s) 369, 1827
Asp700I GAANNNNTTC 4 cut(s) 510, 913, 1883, 2039
AspLEI GCGC 2 cut(s) 492, 855
AspS9I GGNCC 1 cut(s) 447
AsuHPI GGTGA 2 cut(s) 1280, 1488
AsuII TTCGAA 1 cut(s) 299
AvaI CYCGRG 1 cut(s) 1955
AvaII GGWCC 1 cut(s) 447
BalI TGGCCA 1 cut(s) 1011
BamHI GGATCC 1 cut(s) 1408
BarI GAAGNNNNNNTAC 2 cut(s) 520, 552
BbrPI CACGTG 3 cut(s) 1401, 1424, 1451
BbsI GAAGAC 3 cut(s) 306, 1239, 2122
Bbv12I GWGCWC 1 cut(s) 1492
BbvCI CCTCAGC 1 cut(s) 2102
BbvI GCAGC 6 cut(s) 379, 783, 1676, 1771, 1994, 2044
BccI CCATC 3 cut(s) 58, 466, 947
BciT130I CCWGG 6 cut(s) 944, 984, 999, 1222, 1317, 1990
BclI TGATCA 2 cut(s) 834, 1543
BcoDI GTCTC 3 cut(s) 13, 348, 936
BfaI CTAG 3 cut(s) 191, 776, 803
BfmI CTRYAG 2 cut(s) 557, 1637
BfuAI ACCTGC 1 cut(s) 1985
BisI GCNGC 7 cut(s) 13, 393, 772, 1665, 1785, 1983, 2058
BlsI GCNGC 7 cut(s) 14, 394, 773, 1666, 1786, 1984, 2059
BmcAI AGTACT 1 cut(s) 387
Bme1390I CCNGG 6 cut(s) 944, 984, 999, 1222, 1317, 1990
Bme18I GGWCC 1 cut(s) 447
BmeRI GACNNNNNGTC 1 cut(s) 928
BmeT110I CYCGRG 1 cut(s) 1955
BmgBI CACGTC 1 cut(s) 892
BmgT120I GGNCC 1 cut(s) 447
BmiI GGNNCC 3 cut(s) 996, 1033, 1410
BmrFI CCNGG 6 cut(s) 944, 984, 999, 1222, 1317, 1990
BmsI GCATC 5 cut(s) 600, 876, 1015, 1803, 1885
BpiI GAAGAC 3 cut(s) 306, 1239, 2122
BpmI CTGGAG 1 cut(s) 1504
Bpu10I CCTNAGC 1 cut(s) 2102
Bpu14I TTCGAA 1 cut(s) 299
BpuEI CTTGAG 3 cut(s) 37, 248, 1740
BsaAI YACGTR 4 cut(s) 1401, 1424, 1451, 1970
BsaHI GRCGYC 1 cut(s) 1344
BsaJI CCNNGG 7 cut(s) 540, 943, 983, 1220, 1221, 1954, 1989
BsaXI ACNNNNNCTCC 2 cut(s) 779, 809
Bsc4I CCNNNNNNNGG 4 cut(s) 781, 944, 1226, 1531
Bse1I ACTGG 2 cut(s) 324, 374
Bse3DI GCAATG 2 cut(s) 1291, 1823
BseBI CCWGG 6 cut(s) 944, 984, 999, 1222, 1317, 1990
BseDI CCNNGG 7 cut(s) 540, 943, 983, 1220, 1221, 1954, 1989
BseGI GGATG 4 cut(s) 243, 731, 939, 1648
BseLI CCNNNNNNNGG 4 cut(s) 781, 944, 1226, 1531
BseMI GCAATG 2 cut(s) 1291, 1823
BseMII CTCAG 4 cut(s) 1698, 2015, 2107, 2116
BseNI ACTGG 2 cut(s) 324, 374
BseRI GAGGAG 1 cut(s) 1449
BseXI GCAGC 6 cut(s) 379, 783, 1676, 1771, 1994, 2044
Bsh1236I CGCG 1 cut(s) 2121
BshFI GGCC 3 cut(s) 421, 1011, 2001
BsiHKAI GWGCWC 1 cut(s) 1492
BsiHKCI CYCGRG 1 cut(s) 1955
BslFI GGGAC 4 cut(s) 878, 921, 960, 1547
BslI CCNNNNNNNGG 4 cut(s) 781, 944, 1226, 1531
BsmAI GTCTC 3 cut(s) 13, 348, 936
BsmFI GGGAC 4 cut(s) 878, 921, 960, 1547
BsnI GGCC 3 cut(s) 421, 1011, 2001
BsoBI CYCGRG 1 cut(s) 1955
Bsp119I TTCGAA 1 cut(s) 299
Bsp1286I GDGCHC 1 cut(s) 1492
Bsp143I GATC 7 cut(s) 60, 67, 834, 1408, 1543, 1645, 1751
BspACI CCGC 4 cut(s) 486, 630, 769, 785
BspANI GGCC 3 cut(s) 421, 1011, 2001
BspCNI CTCAG 4 cut(s) 1697, 2016, 2106, 2115
BspFNI CGCG 1 cut(s) 2121
BspHI TCATGA 2 cut(s) 82, 1546
BspLI GGNNCC 3 cut(s) 996, 1033, 1410
BspMAI CTGCAG 1 cut(s) 1641
BspMI ACCTGC 1 cut(s) 1985
BspPI GGATC 5 cut(s) 55, 1403, 1416, 1640, 1759
BspQI GCTCTTC 1 cut(s) 1623
BspT104I TTCGAA 1 cut(s) 299
BsrDI GCAATG 2 cut(s) 1291, 1823
BsrI ACTGG 2 cut(s) 324, 374
BssECI CCNNGG 7 cut(s) 540, 943, 983, 1220, 1221, 1954, 1989
BssMI GATC 7 cut(s) 60, 67, 834, 1408, 1543, 1645, 1751
BssNAI GTATAC 1 cut(s) 792
BssNI GRCGYC 1 cut(s) 1344
BssT1I CCWWGG 1 cut(s) 540
Bst1107I GTATAC 1 cut(s) 792
Bst2UI CCWGG 6 cut(s) 944, 984, 999, 1222, 1317, 1990
Bst4CI ACNGT 3 cut(s) 561, 951, 1561
Bst6I CTCTTC 7 cut(s) 1572, 1578, 1599, 1605, 1611, 1623, 2075
BstACI GRCGYC 1 cut(s) 1344
BstBAI YACGTR 4 cut(s) 1401, 1424, 1451, 1970
BstBI TTCGAA 1 cut(s) 299
BstC8I GCNNGC 4 cut(s) 423, 488, 1925, 2088
BstDEI CTNAG 7 cut(s) 71, 89, 482, 1684, 2024, 2093, 2102
BstENI CCTNNNNNAGG 1 cut(s) 779
BstF5I GGATG 4 cut(s) 243, 731, 939, 1648
BstFNI CGCG 1 cut(s) 2121
BstHHI GCGC 2 cut(s) 492, 855
BstKTI GATC 7 cut(s) 63, 70, 837, 1411, 1546, 1648, 1754
BstMAI GTCTC 3 cut(s) 13, 348, 936
BstMBI GATC 7 cut(s) 60, 67, 834, 1408, 1543, 1645, 1751
BstMWI GCNNNNNNNGC 6 cut(s) 607, 1060, 1106, 1991, 2057, 2103
BstNI CCWGG 6 cut(s) 944, 984, 999, 1222, 1317, 1990
BstNSI RCATGY 2 cut(s) 680, 1927
BstSCI CCNGG 6 cut(s) 942, 982, 997, 1220, 1315, 1988
BstSFI CTRYAG 2 cut(s) 557, 1637
BstUI CGCG 1 cut(s) 2121
BstV1I GCAGC 6 cut(s) 379, 783, 1676, 1771, 1994, 2044
BstV2I GAAGAC 3 cut(s) 306, 1239, 2122
BstX2I RGATCY 3 cut(s) 60, 1408, 1751
BstYI RGATCY 3 cut(s) 60, 1408, 1751
BstZ17I GTATAC 1 cut(s) 792
BsuRI GGCC 3 cut(s) 421, 1011, 2001
BtrI CACGTC 1 cut(s) 892
BtsCI GGATG 4 cut(s) 243, 731, 939, 1648
BtsI GCAGTG 1 cut(s) 1058
BtsIMutI CAGTG 5 cut(s) 317, 381, 1058, 1308, 1566
BveI ACCTGC 1 cut(s) 1985
Cac8I GCNNGC 4 cut(s) 423, 488, 1925, 2088
CaiI CAGNNNCTG 1 cut(s) 949
CciI TCATGA 2 cut(s) 82, 1546
CfoI GCGC 2 cut(s) 492, 855
Cfr13I GGNCC 1 cut(s) 447
CseI GACGC 3 cut(s) 1333, 1573, 2110
CsiI ACCWGGT 1 cut(s) 1315
Csp6I GTAC 3 cut(s) 386, 1380, 1386
CviQI GTAC 3 cut(s) 386, 1380, 1386
DdeI CTNAG 7 cut(s) 71, 89, 482, 1684, 2024, 2093, 2102
DpnI GATC 7 cut(s) 62, 69, 836, 1410, 1545, 1647, 1753
DpnII GATC 7 cut(s) 60, 67, 834, 1408, 1543, 1645, 1751
DraI TTTAAA 1 cut(s) 57
DriI GACNNNNNGTC 1 cut(s) 928
EaeI YGGCCR 2 cut(s) 1009, 1999
Eam1104I CTCTTC 7 cut(s) 1572, 1578, 1599, 1605, 1611, 1623, 2075
Eam1105I GACNNNNNGTC 1 cut(s) 928
EarI CTCTTC 7 cut(s) 1572, 1578, 1599, 1605, 1611, 1623, 2075
EciI GGCGGA 1 cut(s) 800
Eco130I CCWWGG 1 cut(s) 540
Eco47I GGWCC 1 cut(s) 447
Eco57I CTGAAG 2 cut(s) 552, 1521
Eco72I CACGTG 3 cut(s) 1401, 1424, 1451
Eco88I CYCGRG 1 cut(s) 1955
EcoNI CCTNNNNNAGG 1 cut(s) 779
EcoRII CCWGG 6 cut(s) 942, 982, 997, 1220, 1315, 1988
EcoT14I CCWWGG 1 cut(s) 540
ErhI CCWWGG 1 cut(s) 540
FaqI GGGAC 4 cut(s) 878, 921, 960, 1547
FauI CCCGC 2 cut(s) 479, 623
FauNDI CATATG 2 cut(s) 718, 904
FbaI TGATCA 2 cut(s) 834, 1543
FblI GTMKAC 1 cut(s) 791
Fnu4HI GCNGC 7 cut(s) 13, 393, 772, 1665, 1785, 1983, 2058
FokI GGATG 4 cut(s) 250, 718, 926, 1655
Fsp4HI GCNGC 7 cut(s) 13, 393, 772, 1665, 1785, 1983, 2058
FspBI CTAG 3 cut(s) 191, 776, 803
FspI TGCGCA 1 cut(s) 854
GlaI GCGC 2 cut(s) 491, 854
GluI GCNGC 7 cut(s) 13, 393, 772, 1665, 1785, 1983, 2058
GsuI CTGGAG 1 cut(s) 1504
HaeIII GGCC 3 cut(s) 421, 1011, 2001
HgaI GACGC 3 cut(s) 1333, 1573, 2110
HhaI GCGC 2 cut(s) 492, 855
Hin1I GRCGYC 1 cut(s) 1344
Hin6I GCGC 2 cut(s) 490, 853
HinP1I GCGC 2 cut(s) 490, 853
HindIII AAGCTT 3 cut(s) 608, 1872, 1880
HphI GGTGA 2 cut(s) 1280, 1488
Hpy166II GTNNAC 6 cut(s) 205, 564, 617, 792, 1404, 1967
Hpy188III TCNNGA 3 cut(s) 83, 499, 1547
Hpy8I GTNNAC 6 cut(s) 205, 564, 617, 792, 1404, 1967
Hpy99I CGWCG 1 cut(s) 1895
HpyAV CCTTC 8 cut(s) 25, 56, 211, 1065, 1259, 1327, 1741, 2071
HpyCH4III ACNGT 3 cut(s) 561, 951, 1561
HpyCH4IV ACGT 7 cut(s) 794, 891, 1400, 1423, 1450, 1469, 1969
HpyF10VI GCNNNNNNNGC 6 cut(s) 607, 1060, 1106, 1991, 2057, 2103
HpyF3I CTNAG 7 cut(s) 71, 89, 482, 1684, 2024, 2093, 2102
HpySE526I ACGT 7 cut(s) 794, 891, 1400, 1423, 1450, 1469, 1969
Hsp92I GRCGYC 1 cut(s) 1344
HspAI GCGC 2 cut(s) 490, 853
Ksp22I TGATCA 2 cut(s) 834, 1543
Kzo9I GATC 7 cut(s) 60, 67, 834, 1408, 1543, 1645, 1751
LguI GCTCTTC 1 cut(s) 1623
Lsp1109I GCAGC 6 cut(s) 379, 783, 1676, 1771, 1994, 2044
LweI GCATC 5 cut(s) 600, 876, 1015, 1803, 1885
MabI ACCWGGT 1 cut(s) 1315
MaeI CTAG 3 cut(s) 191, 776, 803
MaeII ACGT 7 cut(s) 794, 891, 1400, 1423, 1450, 1469, 1969
MaeIII GTNAC 5 cut(s) 267, 685, 712, 761, 1561
MalI GATC 7 cut(s) 62, 69, 836, 1410, 1545, 1647, 1753
MboI GATC 7 cut(s) 60, 67, 834, 1408, 1543, 1645, 1751
MflI RGATCY 3 cut(s) 60, 1408, 1751
MhlI GDGCHC 1 cut(s) 1492
MlsI TGGCCA 1 cut(s) 1011
MluI ACGCGT 1 cut(s) 2119
MluNI TGGCCA 1 cut(s) 1011
MlyI GAGTC 5 cut(s) 320, 350, 649, 938, 1189
MmeI TCCRAC 3 cut(s) 134, 825, 1242
Mox20I TGGCCA 1 cut(s) 1011
MroXI GAANNNNTTC 4 cut(s) 510, 913, 1883, 2039
MscI TGGCCA 1 cut(s) 1011
MseI TTAA 8 cut(s) 56, 306, 476, 551, 645, 882, 1155, 1247
MslI CAYNNNNRTG 3 cut(s) 81, 884, 1893
Msp20I TGGCCA 1 cut(s) 1011
MspA1I CMGCKG 1 cut(s) 1784
MspR9I CCNGG 6 cut(s) 944, 984, 999, 1222, 1317, 1990
MvaI CCWGG 6 cut(s) 944, 984, 999, 1222, 1317, 1990
MvnI CGCG 1 cut(s) 2121
MwoI GCNNNNNNNGC 6 cut(s) 607, 1060, 1106, 1991, 2057, 2103
NdeI CATATG 2 cut(s) 718, 904
NdeII GATC 7 cut(s) 60, 67, 834, 1408, 1543, 1645, 1751
NlaIV GGNNCC 3 cut(s) 996, 1033, 1410
NmuCI GTSAC 3 cut(s) 685, 761, 1561
NsbI TGCGCA 1 cut(s) 854
NspI RCATGY 2 cut(s) 680, 1927
NspV TTCGAA 1 cut(s) 299
PaeI GCATGC 1 cut(s) 1927
PagI TCATGA 2 cut(s) 82, 1546
PaqCI CACCTGC 1 cut(s) 1985
PasI CCCWGGG 1 cut(s) 1221
PciSI GCTCTTC 1 cut(s) 1623
PcsI WCGNNNNNNNCGW 1 cut(s) 1524
PdmI GAANNNNTTC 4 cut(s) 510, 913, 1883, 2039
PkrI GCNGC 7 cut(s) 14, 394, 773, 1666, 1786, 1984, 2059
PleI GAGTC 5 cut(s) 319, 349, 648, 937, 1188
PmaCI CACGTG 3 cut(s) 1401, 1424, 1451
PmlI CACGTG 3 cut(s) 1401, 1424, 1451
PpsI GAGTC 5 cut(s) 319, 349, 648, 937, 1188
Ppu21I YACGTR 4 cut(s) 1401, 1424, 1451, 1970
PsiI TTATAA 1 cut(s) 1197
Psp6I CCWGG 6 cut(s) 942, 982, 997, 1220, 1315, 1988
PspCI CACGTG 3 cut(s) 1401, 1424, 1451
PspGI CCWGG 6 cut(s) 942, 982, 997, 1220, 1315, 1988
PspN4I GGNNCC 3 cut(s) 996, 1033, 1410
PspPI GGNCC 1 cut(s) 447
PstI CTGCAG 1 cut(s) 1641
PstNI CAGNNNCTG 1 cut(s) 949
PsuI RGATCY 3 cut(s) 60, 1408, 1751
PvuII CAGCTG 1 cut(s) 1784
RsaI GTAC 3 cut(s) 387, 1381, 1387
RsaNI GTAC 3 cut(s) 386, 1380, 1386
RseI CAYNNNNRTG 3 cut(s) 81, 884, 1893
SapI GCTCTTC 1 cut(s) 1623
SaqAI TTAA 8 cut(s) 56, 306, 476, 551, 645, 882, 1155, 1247
SatI GCNGC 7 cut(s) 13, 393, 772, 1665, 1785, 1983, 2058
Sau3AI GATC 7 cut(s) 60, 67, 834, 1408, 1543, 1645, 1751
Sau96I GGNCC 1 cut(s) 447
ScaI AGTACT 1 cut(s) 387
SchI GAGTC 5 cut(s) 320, 350, 649, 938, 1189
ScrFI CCNGG 6 cut(s) 944, 984, 999, 1222, 1317, 1990
SduI GDGCHC 1 cut(s) 1492
SexAI ACCWGGT 1 cut(s) 1315
SfaNI GCATC 5 cut(s) 600, 876, 1015, 1803, 1885
SfcI CTRYAG 2 cut(s) 557, 1637
SfuI TTCGAA 1 cut(s) 299
SinI GGWCC 1 cut(s) 447
SmiMI CAYNNNNRTG 3 cut(s) 81, 884, 1893
SmlI CTYRAG 3 cut(s) 16, 263, 1755
SmoI CTYRAG 3 cut(s) 16, 263, 1755
SphI GCATGC 1 cut(s) 1927
SsiI CCGC 4 cut(s) 486, 630, 769, 785
SspMI CTAG 3 cut(s) 191, 776, 803
StyD4I CCNGG 6 cut(s) 942, 982, 997, 1220, 1315, 1988
StyI CCWWGG 1 cut(s) 540
TaaI ACNGT 3 cut(s) 561, 951, 1561
TaiI ACGT 7 cut(s) 797, 894, 1403, 1426, 1453, 1472, 1972
TaqI TCGA 6 cut(s) 299, 500, 1003, 1140, 1518, 1527
TatI WGTACW 1 cut(s) 385
Tru1I TTAA 8 cut(s) 56, 306, 476, 551, 645, 882, 1155, 1247
Tru9I TTAA 8 cut(s) 56, 306, 476, 551, 645, 882, 1155, 1247
TscAI CASTG 5 cut(s) 324, 381, 1065, 1308, 1566
TseFI GTSAC 3 cut(s) 685, 761, 1561
TseI GCWGC 7 cut(s) 12, 392, 771, 1664, 1784, 1982, 2057
Tsp45I GTSAC 3 cut(s) 685, 761, 1561
TspGWI ACGGA 1 cut(s) 1421
TspRI CASTG 5 cut(s) 324, 381, 1065, 1308, 1566
VpaK11BI GGWCC 1 cut(s) 447
XagI CCTNNNNNAGG 1 cut(s) 779
XapI RAATTY 2 cut(s) 369, 1827
XceI RCATGY 2 cut(s) 680, 1927
XmiI GTMKAC 1 cut(s) 791
XmnI GAANNNNTTC 4 cut(s) 510, 913, 1883, 2039
XspI CTAG 3 cut(s) 191, 776, 803
ZrmI AGTACT 1 cut(s) 387
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.