Prupe.2G126300_v2.0.a1

No description available

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Forward (+)
18343901 .. 18349522
5622 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G126300.1

Sequence Viewer

Length: 3225 bp
ATGGCTCTTGTGAGAGCATCCGATCCACAAACCTCCTCTGTTTCCAGTGCTTCTCGATATTGTCGTTATCACGTGTTCCTGAGTTTCAAAGGCCAAGACACTCGCAAGACTTTCACTGACCACCTCTACACGGCCCTTGTCAACGCTGGATTTCGCACTTTCCGAGACGACGACGAAGTCGAGAGAGGAGAAGCTATCAAGCCCGAACTGCAGAAAGCAATCAAACACTCACGAACTTCTGTTATTGTGTTCTCAAAAAACTACGCATCGTCCAGATGGTGTCTTGACGAGCTCGTCATGATCCTTGAACGGCTCTCAGCTGACCATGTCGTTTTACCTGTCTTCTACGACGTGGATCCATCCGATGTGCGGAACCAGACAGGAAGTCTTGCAAAGGCATTTGCTAGACACCAAAAAACCCAACCGTCGAACAAAGTGAAGGAATGGAGGGAGGCACTTGCAGAGGTTGCAGATCTGGCAGGGATGGTCTTACCAAATCAAGCTAATGGACGTGACTCAAAGTTTATCAATAAGATTGTTCAAGTGATAGGAGAAAAACTAAGGCGTAGACCCCTAAGTGTTCCCCACATCATGATCGGAATGCATTCTCGAGTCAACGAACTTAACTTATGGTTACAAGATGGATCAGATGATGTCGGTATACTTGTAATTTATGGCATGAGTGGAATAGGGAAGACAACCATTGCAAAGTCTCTTCATAATACAAACTTTGGAAGATTTGAAGGAAGTAGCTTCATCGAAAACATTAGAGAAATTTCACAACAACCCAATGGCTTAGTTCAAATACAAAAACAATTTCTTTCTGACATTTTGAATGGGAGAAAAATGAAAATAAGCAGTGTTAGTGAGGGATTAATTAAGATTGAAGATGCAATAAGCTCTAAAAGGGTTCTTCTTGTTCTCGATGATGTGGATCATATAGACCAATTAGATGCAGTATTTCAAAGGAAAGATCGATTTTATCCGAGAAGTAAAATCATCATAACAACTAGGCGTGCAAGATTGTTAAAGGCTCGTCAAGTTACTAAGGTGTATGCAGTTGGAACTTTGACTCAAAAAGAATCATTGGAGCTCTTCAGTTGGCACGCTTTTGGCCAAGACCATCCTATTGAAGATTACATAGAATATTCAGAGAAGCTAGTCGATCATTGCGGAGGACTTCCATTAGCTCTCAAAGTTTTAGGTTCTTCTTTGTTGGGGGAAAGTACATGTCTATGGAAAAGTGCATTGGAGAAGTTAGAAGCTATTCCAAATGGTGAAATAATAAATAAACTAAGAGTAAGCTATGACTCTTTGCAAGATGACCATGACCGAAATTTATTCCTCCACATTGCTTGTTTTTTTATCGGAATGGACAAAGATTATTCCTCCACCATGACCGAAAATACTGGATGGATATGTTTGGTGACAATAGTTGATGGATGGGACAAGGTACAGATGCACGACCTGATTCGTGGAATGGGAACAGAAATTGTTCGCCTAGAATCAAATGAGCCTTGGAAGCGTAGTAGAGTATTGCATCATAAGGACTCTTTCAAAATCTTGACGGAAAAGAATGGTACAGAAACAATTGAAGGTCTTGTCCTCGACATGCAAATGTGCCCTACTATAAACTCAAATGAGAAAGTCTTGGAAACCAATGCATTTTCAAGGATGCGGGAACTAAAACTACTCCATCTTAGTCATGTACAACTTAACGGATCTTATGCAGAATTTTGTACAGGACTAATATGGTTGTGTTGGACTAAGTTTCCTTTGGATTCTATACCCGTTGATTTTCCTTTGGAAAGCGTTATTATTCTTGAAATGCAATACAGCGGTCTGAGACAAGTATTCAAGGGAACAAAATATCTTCCATCCTTGAAGATCCTTGATCTCAACCATTCTCATTCCCTTACAGAAACCATTGACTTCTCATATTGCCCAAATCTAGAGAAATTGGTTCTAGTAGACTGTACAAGCCTGATTTATGTCCATGGATCCATTGGAAACCTAGAGAGACTTATTTACTTGAATATGAAAGATTGCAAAAACCTTAGGATGCTTCCCAAGAACATTTGTATGCTAAAATCACTTGAAACATTTATTATATCTGGTTGCTCAAATCTTAGTGAGTTATCAACTGAGATGTTGAGGAATATGGACGCGTTAAAAGTGCTTGAGACAGATGGAATTCCGATAAGTGAATTATGGCTAGAAAAAAGTTCGAGTATCTTGGGTTCTTTACCATGCGCTCTAATGGAATTAAGTCTTTGGGGTTGCAATCTTTCGGATGATGCACTTCCTATGGATTTTAGTAATTTGTCCTCATTGCAGAGACTAAATCTAGGGAATAATCCAATTAGTAGCCTACCAAATTGTATCAAAGGATTAACAAGGCTCCATACACTCTCTTTAAATGAGTGTACGATTCTCAAATCGCTTCTGGGGTTACCAAAACTAAAGGACTTGCATATCTTAAATTGCACATCATTGGAGAAAATAACATATCAATCTTCTTCGTCAGTGTCATGCACATATGGTTACAACCACAACCTAGTTGAGTGGCAGTACAAGTACAAGTTACAACCCATTGGAAGTGTAGATGTAGAAATGATCAACCTCTTGGGATTGTGCAACTTGTTGGAATCAATGGCACCAATTCGGATACACACACTGTACGGATATTTACAAAATGATGATCCAATTCCCGTCCAGGGACTGTACGAACATGGTATATTCAGCACAGTTTTTGGTGGGAATAAGGTTCCAGGCAAATTCAGCCATAAAAGCAGAGGGTCCTCAATATCTTTTACTGTGCCATTACTTGATAATCACAGAACTCGAGGCTTGATTGTCTTTGTTGTCTATGTGAATGCTGGCTATGATTCTCCTCCTATTATCCACCACAATTATTTGTCACAAATAATAGTAAAAAATAAGAGCAACGGTCTGAGGGGGCGGTATTGCCCATCACGCTACGGTATTCCAGGTGAAGGAGAAGACATGATATGGTTAAGCCACTGGAATTTGGAGGATGATCAGTTACAAGGTGGCGATGAAGTGGTTGTTTCTGTAATTATGAAATCTGGGCTTCTGGTAAAGGAGTTGGGCATCCGACTTGTGCAGATGCAACAAGAAGAGAATCATAATATGATGATTTTTACCCTTTTAAATATTGCTCCTCTCCTGAAAAATTCATGTTTAAGTTTCAAGCCCACTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1075

Amino Acids

121.35

Weight (kDa)

6.81

Isoelectric Point (pI)

42.2

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000036)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G57630 AT1G72930 AT5G38344
fragaria_vesca FvH4_1g27020 FvH4_2g00931 FvH4_2g17330 FvH4_2g17330 FvH4_2g17340 FvH4_2g17350 FvH4_2g20690 FvH4_5g15301 FvH4_5g34194 FvH4_5g38530 FvH4_5g38740 FvH4_5g38740 FvH4_5g38740 FvH4_6g03800 FvH4_7g09791 FvH4_7g09800 FvH4_7g09800 FvH4_7g10510 FvH4_7g10520 FvH4_7g10520 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750
malus_domestica MD02G1217100.v1.1 MD02G1217200.v1.1 MD02G1217400.v1.1 MD02G1217600.v1.1 MD02G1264800.v1.1 MD02G1264900.v1.1 MD02G1302100.v1.1 MD04G1010700.v1.1 MD05G1006800.v1.1 MD05G1140100.v1.1 MD05G1140200.v1.1 MD05G1152200.v1.1 MD07G1073500.v1.1 MD07G1101700.v1.1 MD07G1102200.v1.1 MD07G1103200.v1.1 MD07G1112300.v1.1 MD08G1018200.v1.1 MD08G1018400.v1.1 MD08G1018800.v1.1 MD08G1019000.v1.1 MD08G1019100.v1.1 MD08G1019200.v1.1 MD08G1019300.v1.1 MD08G1019400.v1.1 MD08G1019600.v1.1 MD08G1019900.v1.1 MD08G1020000.v1.1 MD08G1020200.v1.1 MD08G1020500.v1.1 MD08G1020700.v1.1 MD08G1020800.v1.1 MD08G1040700.v1.1 MD11G1112400.v1.1 MD12G1068600.v1.1 MD12G1193200.v1.1 MD13G1050600.v1.1 MD15G1374900.v1.1 MD15G1375100.v1.1 MD15G1416500.v1.1 MD17G1072500.v1.1 MD17G1274200.v1.1 MD17G1274900.v1.1
prunus_persica Prupe.2G121000_v2.0.a1 Prupe.2G121000_v2.0.a1 Prupe.2G125800_v2.0.a1 Prupe.2G126000_v2.0.a1 Prupe.2G126100_v2.0.a1 Prupe.2G126200_v2.0.a1 Prupe.2G126300_v2.0.a1 Prupe.2G126400_v2.0.a1 Prupe.2G126500_v2.0.a1 Prupe.2G126600_v2.0.a1 Prupe.2G126700_v2.0.a1 Prupe.2G126700_v2.0.a1 Prupe.2G126800_v2.0.a1 Prupe.2G126900_v2.0.a1 Prupe.2G127000_v2.0.a1 Prupe.2G127000_v2.0.a1 Prupe.2G127000_v2.0.a1 Prupe.2G127000_v2.0.a1 Prupe.2G135500_v2.0.a1 Prupe.2G135600_v2.0.a1 Prupe.2G135700_v2.0.a1 Prupe.2G135700_v2.0.a1 Prupe.3G009800_v2.0.a1 Prupe.3G010200_v2.0.a1 Prupe.3G131000_v2.0.a1 Prupe.4G260800_v2.0.a1 Prupe.4G260900_v2.0.a1 Prupe.6G083100_v2.0.a1 Prupe.6G083200_v2.0.a1 Prupe.6G083400_v2.0.a1 Prupe.6G132100_v2.0.a1 Prupe.8G184900_v2.0.a1 Prupe.8G185200_v2.0.a1 Prupe.8G185300_v2.0.a1
pyrus_communis pycom02g17870 pycom02g17880 pycom02g19520 pycom02g22610 pycom02g22630 pycom02g22680 pycom05g13540 pycom05g14680 pycom07g04880 pycom07g04890 pycom07g05690 pycom07g05710 pycom07g05720 pycom07g05750 pycom07g05780 pycom07g06300 pycom07g08320 pycom07g08330 pycom07g08350 pycom07g08360 pycom07g08370 pycom07g08410 pycom07g08420 pycom07g08430 pycom07g08440 pycom07g08470 pycom07g08480 pycom07g08520 pycom07g08550 pycom07g08560 pycom07g08640 pycom07g08660 pycom07g08670 pycom07g08680 pycom07g08690 pycom07g08720 pycom07g08730 pycom07g08790 pycom07g08800 pycom07g08810 pycom07g08860 pycom07g08890 pycom07g09720 pycom08g01590 pycom08g01600 pycom08g01620 pycom08g01630 pycom08g01640 pycom10g12630 pycom15g16490 pycom17g07200 pycom17g07210 pycom17g07220 pycom17g11730 pycom17g11740 pycom17g27340 pycom17g27380
rosa_chinensis RchiOBHm_Chr1g0342571 RchiOBHm_Chr1g0346231 RchiOBHm_Chr1g0346831 RchiOBHm_Chr1g0346891 RchiOBHm_Chr1g0348311 RchiOBHm_Chr1g0348321 RchiOBHm_Chr1g0348331 RchiOBHm_Chr1g0348361 RchiOBHm_Chr1g0348371 RchiOBHm_Chr1g0348381 RchiOBHm_Chr1g0348401 RchiOBHm_Chr1g0348411 RchiOBHm_Chr1g0348421 RchiOBHm_Chr1g0348431 RchiOBHm_Chr2g0130881 RchiOBHm_Chr3g0487331 RchiOBHm_Chr5g0060371 RchiOBHm_Chr6g0246491 RchiOBHm_Chr6g0246871 RchiOBHm_Chr6g0250311 RchiOBHm_Chr6g0250781 RchiOBHm_Chr6g0251431 RchiOBHm_Chr6g0281871 RchiOBHm_Chr6g0281881 RchiOBHm_Chr6g0281931 RchiOBHm_Chr6g0281941 RchiOBHm_Chr6g0281951 RchiOBHm_Chr6g0281971 RchiOBHm_Chr6g0281981 RchiOBHm_Chr7g0240541 RchiOBHm_Chr7g0240631 RchiOBHm_Chr7g0240671
rosa_laevigata RLG00000000627 RLG00000000631 RLG00000000641 RLG00000000645 RLG00000000652 RLG00000000662 RLG00000000663 RLG00000000667 RLG00000000670 RLG00000000702 RLG00000001216 RLG00000001219 RLG00000007678 RLG00000012923 RLG00000012996 RLG00000013243 RLG00000017513 RLG00000017514 RLG00000020936 RLG00000022755 RLG00000023013 RLG00000028646 RLG00000028654 RLG00000028662 RLG00000028665 RLG00000028667 RLG00000028711 RLG00000028714 RLG00000028716 RLG00000028770 RLG00000028771 RLG00000028773 RLG00000028778 RLG00000028798 RLG00000028809 RLG00000028813 RLG00000029334 RLG00000030003 RLG00000033910 RLG00000034358 RLG00000035430
rosa_multiflora Rmu_co8031134.1_g000001 Rmu_co8092796.1_g000001 Rmu_co8130156.1_g000001 Rmu_co8325323.1_g000001 Rmu_co8424083.1_g000002 Rmu_sc0000008.1_g000003 Rmu_sc0000008.1_g000011 Rmu_sc0000008.1_g000015 Rmu_sc0000008.1_g000020 Rmu_sc0000091.1_g000015 Rmu_sc0000091.1_g000018 Rmu_sc0000091.1_g000029 Rmu_sc0000091.1_g000031 Rmu_sc0000391.1_g000004 Rmu_sc0001070.1_g000030 Rmu_sc0001293.1_g000016 Rmu_sc0001674.1_g000006 Rmu_sc0001731.1_g000002 Rmu_sc0001731.1_g000003 Rmu_sc0001731.1_g000005 Rmu_sc0001911.1_g000029 Rmu_sc0001913.1_g000038 Rmu_sc0001955.1_g000025 Rmu_sc0001992.1_g000022 Rmu_sc0001992.1_g000028 Rmu_sc0001992.1_g000031 Rmu_sc0002517.1_g000013 Rmu_sc0002517.1_g000017 Rmu_sc0002551.1_g000022 Rmu_sc0002551.1_g000029 Rmu_sc0002551.1_g000038 Rmu_sc0002705.1_g000015 Rmu_sc0002705.1_g000016 Rmu_sc0002882.1_g000055 Rmu_sc0003232.1_g000027 Rmu_sc0003363.1_g000037 Rmu_sc0003600.1_g000054 Rmu_sc0003918.1_g000011 Rmu_sc0004395.1_g000011 Rmu_sc0005071.1_g000004 Rmu_sc0005255.1_g000018 Rmu_sc0005327.1_g000004 Rmu_sc0005597.1_g000007 Rmu_sc0007060.1_g000007 Rmu_sc0007310.1_g000003 Rmu_sc0007383.1_g000014 Rmu_sc0007799.1_g000003 Rmu_sc0008477.1_g000016 Rmu_sc0010151.1_g000009 Rmu_sc0011217.1_g000005 Rmu_sc0016269.1_g000006 Rmu_sc0021495.1_g000001 Rmu_sc0027364.1_g000001 Rmu_sc0029432.1_g000001 Rmu_sc0041386.1_g000001 Rmu_ssc0000126.1_g000023 Rmu_ssc0000126.1_g000027
rosa_roxburghii Rroxscaffold_1G00006130 Rroxscaffold_1G00023320 Rroxscaffold_1G00038770 Rroxscaffold_2G00119800 Rroxscaffold_2G00121860 Rroxscaffold_3G00219780 Rroxscaffold_3G00219890 Rroxscaffold_4G00306740 Rroxscaffold_4G00306820 Rroxscaffold_4G00307000 Rroxscaffold_4G00307010 Rroxscaffold_4G00307020 Rroxscaffold_4G00308030 Rroxscaffold_4G00308070 Rroxscaffold_4G00308450 Rroxscaffold_4G00308460 Rroxscaffold_4G00315320 Rroxscaffold_5G00352470 Rroxscaffold_5G00371420 Rroxscaffold_6G00392300 Rroxscaffold_6G00394870 Rroxscaffold_6G00394890 Rroxscaffold_7G00186700 Rroxscaffold_7G00194980 Rroxscaffold_7G00216840
rosa_rugosa Rorug01G0076100 Rorug01G0128100 Rorug01G0149000.1 Rorug01G0149500.1 Rorug01G0180000 Rorug01G0180100 Rorug01G0182900 Rorug01G0184000 Rorug01G0184100 Rorug01G0184300 Rorug01G0184600 Rorug01G0184700 Rorug01G0184700 Rorug01G0184900 Rorug01G0185000 Rorug01G0185100 Rorug01G0189300 Rorug01G0194100 Rorug01G0194100 Rorug01G0194200 Rorug01G0194400 Rorug01G0194400 Rorug01G0194500 Rorug02G0090400 Rorug02G0090400 Rorug03G0233000 Rorug03G0233100 Rorug05G0178600 Rorug05G0178700 Rorug05G0579200 Rorug06G0144100 Rorug06G0144300 Rorug06G0144300 Rorug06G0179300 Rorug06G0208800 Rorug07G0323500 Rorug07G0337000
rosa_samantha Rh1AG046100 Rh1AG201400 Rh1AG201800 Rh1AG202100 Rh1AG202600 Rh1AG211500 Rh1AG211800 Rh1AG212200 Rh1AG212500 Rh1AG212600 Rh1AG214200 Rh1BG168000 Rh1BG168300 Rh1BG168500 Rh1BG177900 Rh1BG178200 Rh1BG178300 Rh1BG178800 Rh1BG178900 Rh1CG080900 Rh1CG183300 Rh1CG186300 Rh1CG186700 Rh1CG187000 Rh1CG187300 Rh1CG193400 Rh1CG195800 Rh1CG196000 Rh1CG196100 Rh1CG196400 Rh1CG196500 Rh1CG196800 Rh1CG198800 Rh1CG442600 Rh1DG086200 Rh1DG155400 Rh1DG156200 Rh1DG194000 Rh1DG194300 Rh1DG194900 Rh1DG197000 Rh1DG198800 Rh1DG199000 Rh1DG199200 Rh1DG202000 Rh1DG203900 Rh1DG207600 Rh1DG207900 Rh1DG208000 Rh1DG208500 Rh1DG208600 Rh1DG208700 Rh3CG339100 Rh5AG106500 Rh5AG264800 Rh5AG265300 Rh5CG302800 Rh5DG277900 Rh6AG257600 Rh6AG257700 Rh6BG260500 Rh6BG260700 Rh6CG259600 Rh6CG259700 Rh6DG252100 Rh7DG126900
rosa_wichuraiana Rw0G005780 Rw0G007540 Rw0G007550 Rw0G007560 Rw0G009390 Rw1G016900 Rw1G016930 Rw1G016940 Rw1G016970 Rw1G017860 Rw1G017890 Rw1G017900 Rw1G017910 Rw1G017920 Rw1G017960 Rw1G017970 Rw1G017980 Rw1G018150 Rw4G000830 Rw5G009290 Rw5G018950 Rw5G024850 Rw5G024870 Rw5G040460 Rw6G022290 Rw7G041020 Rw7G041200 Rw7G041360 Rw7G041450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 176, 293
AccB1I GGYRCC 1 cut(s) 2656
AccI GTMKAC 3 cut(s) 568, 661, 1971
AccII CGCG 1 cut(s) 2168
AciI CCGC 5 cut(s) 370, 1173, 1678, 1839, 2962
AcoI YGGCCR 1 cut(s) 1114
AcsI RAATTY 7 cut(s) 774, 1336, 1733, 2193, 2777, 3028, 3196
AcuI CTGAAG 1 cut(s) 1081
AcvI CACGTG 1 cut(s) 73
AfiI CCNNNNNNNGG 4 cut(s) 130, 369, 2717, 2996
AflIII ACRYGT 3 cut(s) 72, 1229, 2166
AhdI GACNNNNNGTC 1 cut(s) 384
AjiI CACGTC 2 cut(s) 352, 512
AjnI CCWGG 3 cut(s) 2715, 2770, 2989
AjuI GAANNNNNNNTTGG 2 cut(s) 1232, 1264
Alw21I GWGCWC 2 cut(s) 294, 1095
Alw26I GTCTC 6 cut(s) 159, 717, 1840, 2014, 2177, 2332
AlwNI CAGNNNCTG 1 cut(s) 2722
Ama87I CYCGRG 2 cut(s) 609, 2844
AoxI GGCC 3 cut(s) 91, 132, 1114
ApoI RAATTY 7 cut(s) 774, 1336, 1733, 2193, 2777, 3028, 3196
AseI ATTAAT 1 cut(s) 875
Asp700I GAANNNNTTC 3 cut(s) 604, 1266, 1494
AspLEI GCGC 1 cut(s) 2255
AspS9I GGNCC 2 cut(s) 133, 2799
AsuHPI GGTGA 3 cut(s) 1289, 1438, 3005
AvaI CYCGRG 2 cut(s) 609, 2844
AvaII GGWCC 1 cut(s) 2799
AxyI CCTNAGG 1 cut(s) 2057
BaeGI GKGCMC 1 cut(s) 1625
BalI TGGCCA 1 cut(s) 1116
BamHI GGATCC 2 cut(s) 355, 2000
BanI GGYRCC 1 cut(s) 2656
BanII GRGCYC 2 cut(s) 294, 1095
BbrPI CACGTG 1 cut(s) 73
BbsI GAAGAC 3 cut(s) 334, 701, 3009
Bbv12I GWGCWC 2 cut(s) 294, 1095
BceAI ACGGC 2 cut(s) 147, 326
BciT130I CCWGG 3 cut(s) 2717, 2772, 2991
BciVI GTATCC 1 cut(s) 2661
BclI TGATCA 2 cut(s) 2616, 3040
BcoDI GTCTC 6 cut(s) 159, 717, 1840, 2014, 2177, 2332
BfmI CTRYAG 1 cut(s) 209
BfuI GTATCC 1 cut(s) 2661
BglII AGATCT 1 cut(s) 472
Bme1390I CCNGG 3 cut(s) 2717, 2772, 2991
Bme18I GGWCC 1 cut(s) 2799
BmeRI GACNNNNNGTC 1 cut(s) 384
BmeT110I CYCGRG 2 cut(s) 609, 2844
BmgBI CACGTC 2 cut(s) 352, 512
BmgT120I GGNCC 2 cut(s) 133, 2799
BmiI GGNNCC 7 cut(s) 357, 374, 2002, 2402, 2658, 2769, 2800
BmrFI CCNGG 3 cut(s) 2717, 2772, 2991
BpiI GAAGAC 3 cut(s) 334, 701, 3009
BpuEI CTTGAG 1 cut(s) 2201
Bsa29I ATCGAT 1 cut(s) 976
BsaAI YACGTR 1 cut(s) 73
BsaBI GATNNNNATC 1 cut(s) 933
BsaJI CCNNGG 3 cut(s) 1517, 1996, 2716
Bsc4I CCNNNNNNNGG 4 cut(s) 130, 369, 2717, 2996
Bse1I ACTGG 3 cut(s) 45, 1414, 3029
Bse21I CCTNAGG 1 cut(s) 2057
Bse3DI GCAATG 4 cut(s) 702, 1168, 1350, 2330
Bse8I GATNNNNATC 1 cut(s) 933
BseBI CCWGG 3 cut(s) 2717, 2772, 2991
BseCI ATCGAT 1 cut(s) 976
BseDI CCNNGG 3 cut(s) 1517, 1996, 2716
BseJI GATNNNNATC 1 cut(s) 933
BseLI CCNNNNNNNGG 4 cut(s) 130, 369, 2717, 2996
BseMI GCAATG 4 cut(s) 702, 1168, 1350, 2330
BseMII CTCAG 5 cut(s) 71, 330, 1835, 2136, 2945
BseNI ACTGG 3 cut(s) 45, 1414, 3029
BseRI GAGGAG 4 cut(s) 25, 201, 2883, 3174
BseSI GKGCMC 1 cut(s) 1625
BsgI GTGCAG 1 cut(s) 3146
Bsh1236I CGCG 1 cut(s) 2168
BshFI GGCC 3 cut(s) 93, 134, 1116
BshNI GGYRCC 1 cut(s) 2656
BshVI ATCGAT 1 cut(s) 976
BsiHKAI GWGCWC 2 cut(s) 294, 1095
BsiHKCI CYCGRG 2 cut(s) 609, 2844
BslFI GGGAC 2 cut(s) 1460, 2733
BslI CCNNNNNNNGG 4 cut(s) 130, 369, 2717, 2996
BsmAI GTCTC 6 cut(s) 159, 717, 1840, 2014, 2177, 2332
BsmBI CGTCTC 1 cut(s) 159
BsmFI GGGAC 2 cut(s) 1460, 2733
BsmI GAATGC 3 cut(s) 604, 606, 2881
BsnI GGCC 3 cut(s) 93, 134, 1116
BsoBI CYCGRG 2 cut(s) 609, 2844
Bsp1286I GDGCHC 3 cut(s) 294, 1095, 1625
Bsp1407I TGTACA 3 cut(s) 1708, 1739, 1976
Bsp19I CCATGG 1 cut(s) 1996
BspACI CCGC 5 cut(s) 370, 1173, 1678, 1839, 2962
BspANI GGCC 3 cut(s) 93, 134, 1116
BspCNI CTCAG 5 cut(s) 72, 329, 1836, 2137, 2946
BspDI ATCGAT 1 cut(s) 976
BspFNI CGCG 1 cut(s) 2168
BspHI TCATGA 2 cut(s) 297, 591
BspLI GGNNCC 7 cut(s) 357, 374, 2002, 2402, 2658, 2769, 2800
BspMAI CTGCAG 1 cut(s) 213
BspQI GCTCTTC 1 cut(s) 1100
BspT107I GGYRCC 1 cut(s) 2656
BsrDI GCAATG 4 cut(s) 702, 1168, 1350, 2330
BsrGI TGTACA 3 cut(s) 1708, 1739, 1976
BsrI ACTGG 3 cut(s) 45, 1414, 3029
BssECI CCNNGG 3 cut(s) 1517, 1996, 2716
BssNAI GTATAC 1 cut(s) 662
BssT1I CCWWGG 2 cut(s) 1517, 1996
Bst1107I GTATAC 1 cut(s) 662
Bst2UI CCWGG 3 cut(s) 2717, 2772, 2991
Bst4CI ACNGT 8 cut(s) 426, 1976, 2679, 2724, 2749, 2818, 2951, 2984
Bst6I CTCTTC 3 cut(s) 720, 1100, 3135
BstAPI GCANNNNNTGC 1 cut(s) 467
BstAUI TGTACA 3 cut(s) 1708, 1739, 1976
BstBAI YACGTR 1 cut(s) 73
BstC8I GCNNGC 3 cut(s) 1017, 1107, 2881
BstDSI CCRYGG 1 cut(s) 1996
BstEII GGTNACC 1 cut(s) 2451
BstFNI CGCG 1 cut(s) 2168
BstHHI GCGC 1 cut(s) 2255
BstMAI GTCTC 6 cut(s) 159, 717, 1840, 2014, 2177, 2332
BstMWI GCNNNNNNNGC 7 cut(s) 208, 467, 476, 1522, 2781, 2790, 2976
BstNI CCWGG 3 cut(s) 2717, 2772, 2991
BstNSI RCATGY 2 cut(s) 1233, 1615
BstPI GGTNACC 1 cut(s) 2451
BstSCI CCNGG 3 cut(s) 2715, 2770, 2989
BstSFI CTRYAG 1 cut(s) 209
BstSLI GKGCMC 1 cut(s) 1625
BstUI CGCG 1 cut(s) 2168
BstV2I GAAGAC 3 cut(s) 334, 701, 3009
BstX2I RGATCY 5 cut(s) 355, 472, 1721, 1887, 2000
BstYI RGATCY 5 cut(s) 355, 472, 1721, 1887, 2000
BstZ17I GTATAC 1 cut(s) 662
Bsu15I ATCGAT 1 cut(s) 976
Bsu36I CCTNAGG 1 cut(s) 2057
BsuI GTATCC 1 cut(s) 2661
BsuRI GGCC 3 cut(s) 93, 134, 1116
BsuTUI ATCGAT 1 cut(s) 976
BtgI CCRYGG 1 cut(s) 1996
BtgZI GCGATG 1 cut(s) 3072
BtrI CACGTC 2 cut(s) 352, 512
BtsI GCAGTG 1 cut(s) 865
BtsIMutI CAGTG 6 cut(s) 52, 114, 865, 2532, 2675, 3022
Cac8I GCNNGC 3 cut(s) 1017, 1107, 2881
CaiI CAGNNNCTG 1 cut(s) 2722
CciI TCATGA 2 cut(s) 297, 591
CfoI GCGC 1 cut(s) 2255
Cfr13I GGNCC 2 cut(s) 133, 2799
ClaI ATCGAT 1 cut(s) 976
CseI GACGC 1 cut(s) 2174
CspCI CAANNNNNGTGG 2 cut(s) 1337, 1372
DraI TTTAAA 2 cut(s) 2418, 3174
DrdI GACNNNNNNGTC 2 cut(s) 176, 293
DriI GACNNNNNGTC 1 cut(s) 384
DseDI GACNNNNNNGTC 2 cut(s) 176, 293
EaeI YGGCCR 1 cut(s) 1114
Eam1104I CTCTTC 3 cut(s) 720, 1100, 3135
Eam1105I GACNNNNNGTC 1 cut(s) 384
EarI CTCTTC 3 cut(s) 720, 1100, 3135
Ecl136II GAGCTC 2 cut(s) 292, 1093
Eco130I CCWWGG 2 cut(s) 1517, 1996
Eco24I GRGCYC 2 cut(s) 294, 1095
Eco47I GGWCC 1 cut(s) 2799
Eco53kI GAGCTC 2 cut(s) 292, 1093
Eco57I CTGAAG 1 cut(s) 1081
Eco72I CACGTG 1 cut(s) 73
Eco81I CCTNAGG 1 cut(s) 2057
Eco88I CYCGRG 2 cut(s) 609, 2844
Eco91I GGTNACC 1 cut(s) 2451
EcoICRI GAGCTC 2 cut(s) 292, 1093
EcoO109I RGGNCCY 1 cut(s) 2799
EcoO65I GGTNACC 1 cut(s) 2451
EcoRI GAATTC 1 cut(s) 2193
EcoRII CCWGG 3 cut(s) 2715, 2770, 2989
EcoT14I CCWWGG 2 cut(s) 1517, 1996
EcoT22I ATGCAT 2 cut(s) 606, 1666
EcoT38I GRGCYC 2 cut(s) 294, 1095
ErhI CCWWGG 2 cut(s) 1517, 1996
Esp3I CGTCTC 1 cut(s) 159
FaqI GGGAC 2 cut(s) 1460, 2733
FauI CCCGC 1 cut(s) 1671
FauNDI CATATG 1 cut(s) 2539
FbaI TGATCA 2 cut(s) 2616, 3040
FblI GTMKAC 3 cut(s) 568, 661, 1971
FriOI GRGCYC 2 cut(s) 294, 1095
GlaI GCGC 1 cut(s) 2254
HaeIII GGCC 3 cut(s) 93, 134, 1116
HgaI GACGC 1 cut(s) 2174
HhaI GCGC 1 cut(s) 2255
Hin6I GCGC 1 cut(s) 2253
HinP1I GCGC 1 cut(s) 2253
HincII GTYRAC 2 cut(s) 142, 616
HindII GTYRAC 2 cut(s) 142, 616
HphI GGTGA 3 cut(s) 1289, 1438, 3005
Hpy166II GTNNAC 6 cut(s) 142, 569, 616, 662, 1972, 2427
Hpy8I GTNNAC 6 cut(s) 142, 569, 616, 662, 1972, 2427
Hpy99I CGWCG 4 cut(s) 173, 176, 353, 430
HpyAV CCTTC 4 cut(s) 433, 737, 1589, 2990
HpyCH4III ACNGT 8 cut(s) 426, 1976, 2679, 2724, 2749, 2818, 2951, 2984
HpyCH4IV ACGT 3 cut(s) 72, 351, 511
HpyF10VI GCNNNNNNNGC 7 cut(s) 208, 467, 476, 1522, 2781, 2790, 2976
HpySE526I ACGT 3 cut(s) 72, 351, 511
HspAI GCGC 1 cut(s) 2253
Ksp22I TGATCA 2 cut(s) 2616, 3040
LguI GCTCTTC 1 cut(s) 1100
LmnI GCTCC 3 cut(s) 1090, 2406, 3187
MaeII ACGT 3 cut(s) 72, 351, 511
MaeIII GTNAC 9 cut(s) 512, 633, 1042, 1426, 2451, 2543, 2583, 2919, 3045
MfeI CAATTG 1 cut(s) 1590
MflI RGATCY 5 cut(s) 355, 472, 1721, 1887, 2000
MhlI GDGCHC 3 cut(s) 294, 1095, 1625
MlsI TGGCCA 1 cut(s) 1116
MluI ACGCGT 1 cut(s) 2166
MluNI TGGCCA 1 cut(s) 1116
MlyI GAGTC 5 cut(s) 509, 621, 1066, 1304, 1544
MmeI TCCRAC 4 cut(s) 1042, 1742, 2625, 3142
Mox20I TGGCCA 1 cut(s) 1116
Mph1103I ATGCAT 2 cut(s) 606, 1666
MroXI GAANNNNTTC 3 cut(s) 604, 1266, 1494
MscI TGGCCA 1 cut(s) 1116
MslI CAYNNNNRTG 3 cut(s) 1234, 1616, 2081
Msp20I TGGCCA 1 cut(s) 1116
MspA1I CMGCKG 2 cut(s) 320, 1839
MspR9I CCNGG 3 cut(s) 2717, 2772, 2991
MunI CAATTG 1 cut(s) 1590
Mva1269I GAATGC 3 cut(s) 604, 606, 2881
MvaI CCWGG 3 cut(s) 2717, 2772, 2991
MvnI CGCG 1 cut(s) 2168
MwoI GCNNNNNNNGC 7 cut(s) 208, 467, 476, 1522, 2781, 2790, 2976
NcoI CCATGG 1 cut(s) 1996
NdeI CATATG 1 cut(s) 2539
NlaIV GGNNCC 7 cut(s) 357, 374, 2002, 2402, 2658, 2769, 2800
NmuCI GTSAC 3 cut(s) 512, 1426, 2919
NsiI ATGCAT 2 cut(s) 606, 1666
NspI RCATGY 2 cut(s) 1233, 1615
PacI TTAATTAA 1 cut(s) 879
PaeR7I CTCGAG 2 cut(s) 609, 2844
PagI TCATGA 2 cut(s) 297, 591
PciI ACATGT 1 cut(s) 1229
PciSI GCTCTTC 1 cut(s) 1100
PcsI WCGNNNNNNNCGW 3 cut(s) 61, 160, 177
PctI GAATGC 3 cut(s) 604, 606, 2881
PdmI GAANNNNTTC 3 cut(s) 604, 1266, 1494
PfeI GAWTC 8 cut(s) 1082, 1471, 1505, 1781, 2431, 2648, 2888, 3145
PflFI GACNNNGTC 2 cut(s) 176, 326
PleI GAGTC 5 cut(s) 509, 620, 1066, 1304, 1544
PmaCI CACGTG 1 cut(s) 73
PmlI CACGTG 1 cut(s) 73
PpsI GAGTC 5 cut(s) 509, 620, 1066, 1304, 1544
Ppu21I YACGTR 1 cut(s) 73
PpuMI RGGWCCY 1 cut(s) 2799
PscI ACATGT 1 cut(s) 1229
PshBI ATTAAT 1 cut(s) 875
Psp124BI GAGCTC 2 cut(s) 294, 1095
Psp5II RGGWCCY 1 cut(s) 2799
Psp6I CCWGG 3 cut(s) 2715, 2770, 2989
PspCI CACGTG 1 cut(s) 73
PspEI GGTNACC 1 cut(s) 2451
PspGI CCWGG 3 cut(s) 2715, 2770, 2989
PspN4I GGNNCC 7 cut(s) 357, 374, 2002, 2402, 2658, 2769, 2800
PspPI GGNCC 2 cut(s) 133, 2799
PspPPI RGGWCCY 1 cut(s) 2799
PspXI VCTCGAGB 1 cut(s) 2844
PsrI GAACNNNNNNTAC 4 cut(s) 1674, 1706, 2224, 2256
PstI CTGCAG 1 cut(s) 213
PstNI CAGNNNCTG 1 cut(s) 2722
PsuI RGATCY 5 cut(s) 355, 472, 1721, 1887, 2000
PsyI GACNNNGTC 2 cut(s) 176, 326
PvuII CAGCTG 1 cut(s) 320
RseI CAYNNNNRTG 3 cut(s) 1234, 1616, 2081
SacI GAGCTC 2 cut(s) 294, 1095
SapI GCTCTTC 1 cut(s) 1100
Sau96I GGNCC 2 cut(s) 133, 2799
SchI GAGTC 5 cut(s) 509, 621, 1066, 1304, 1544
ScrFI CCNGG 3 cut(s) 2717, 2772, 2991
SduI GDGCHC 3 cut(s) 294, 1095, 1625
SfcI CTRYAG 1 cut(s) 209
Sfr274I CTCGAG 2 cut(s) 609, 2844
SinI GGWCC 1 cut(s) 2799
SlaI CTCGAG 2 cut(s) 609, 2844
SmiMI CAYNNNNRTG 3 cut(s) 1234, 1616, 2081
SmlI CTYRAG 3 cut(s) 609, 2180, 2844
SmoI CTYRAG 3 cut(s) 609, 2180, 2844
SsiI CCGC 5 cut(s) 370, 1173, 1678, 1839, 2962
SspI AATATT 2 cut(s) 1148, 3178
SstI GAGCTC 2 cut(s) 294, 1095
StyD4I CCNGG 3 cut(s) 2715, 2770, 2989
StyI CCWWGG 2 cut(s) 1517, 1996
TaaI ACNGT 8 cut(s) 426, 1976, 2679, 2724, 2749, 2818, 2951, 2984
TaiI ACGT 3 cut(s) 75, 354, 514
TaqII GACCGA 2 cut(s) 1347, 1415
TatI WGTACW 6 cut(s) 1226, 1708, 1739, 1976, 2571, 2577
TfiI GAWTC 8 cut(s) 1082, 1471, 1505, 1781, 2431, 2648, 2888, 3145
TscAI CASTG 6 cut(s) 52, 121, 865, 2532, 2682, 3029
TseFI GTSAC 3 cut(s) 512, 1426, 2919
Tsp45I GTSAC 3 cut(s) 512, 1426, 2919
TspDTI ATGAA 7 cut(s) 707, 745, 863, 2054, 3075, 3098, 3189
TspGWI ACGGA 3 cut(s) 1583, 1734, 2697
TspRI CASTG 6 cut(s) 52, 121, 865, 2532, 2682, 3029
Tth111I GACNNNGTC 2 cut(s) 176, 326
VpaK11BI GGWCC 1 cut(s) 2799
VspI ATTAAT 1 cut(s) 875
XapI RAATTY 7 cut(s) 774, 1336, 1733, 2193, 2777, 3028, 3196
XbaI TCTAGA 1 cut(s) 1951
XceI RCATGY 2 cut(s) 1233, 1615
XcmI CCANNNNNNNNNTGG 1 cut(s) 2003
XhoI CTCGAG 2 cut(s) 609, 2844
XmiI GTMKAC 3 cut(s) 568, 661, 1971
XmnI GAANNNNTTC 3 cut(s) 604, 1266, 1494
Zsp2I ATGCAT 2 cut(s) 606, 1666
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.