Prupe.2G135600_v2.0.a1

TMV resistance protein N-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
OG0000036
Physical Location & Seq
Reverse (-)
19325579 .. 19327406
1828 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G135600.1

Sequence Viewer

Length: 1278 bp
ATGGCCCTTGTAAGATCTCAAGAAGCCTCCTCTTCTGATACTAACTGTAGTTGTAGTTATCACGTGTTCTTGAGCTTCAGAGGTGAAGACACTCGCAGGACTTTTACTGACCACCTTTATACAGCCTTTGTCAATTCAGGGCTACAAACTTTCCGAGACGACGATGAACTTGAGAGAGGGGAAGGGATCAAAACAGAGCTGGAGAAAGCAATCCAACACTCACGAAGTTCTGTCATTGTGTTCGTGAAAAACTATGCGTCTTCCAAATGGTGCCTTGACGAACTAGTGAAGATCCTTGAACGCAAGAGGGCCTCTGATGATCATGTAATTTTACCAGTCTTCTATGACATTGACCCATCTGAGGTGAGGAAACAGACAGGAAGCTTGGCAAAAGCATTTGCTAGACACCGACAGAACCGATCTTTGAACAAGGACAGGATAAGTGGATGGAGAGCAGCACTTACAGAAGTTGCAGATCTGGCAGGGATGGTCTTACAAAATGAAGCTGATGGGCACGAGGCAAAGTTTATTAAGAAAATTGTTAAAGTGATTGAAGGCAAGCTAAGTCGCACGCCCTTAAGTGTTTCCCCTTACCTGATTGGAATCAATCATCGAGTGAAAGACATTAATTCATGGTTGCAAGATGGATCCTCCGATGTTGGCATATGTGCAATTTATGGGATTGGTGGAATAGGGAAGACAACCATTGCGCAAGTTGTTTACAATTCAAATTTTTCAAGATTTGAAGGAAGAAGTTTCCTTGAAAACATAAGGGAAATTTCTGAACAACCCAATGGATTAGTTCAAGTACAAATGCAACTTCTTTCTCATATTCTGAATGGGAGAAAAGTAAAAATACACAATATTAGTGAGGGGATCACTAAGATTAAAGATGTCATAAGCTGTAAAAAAGTACTTCTTATTCTCGATGATGTGGATCATATGCGCCAATTAGATGCGATACTTAGAATGAAAGATTGGTTTTGCCCAGGAAGTAAAATCATTATAACAACTAGGTCTGTGGGGTTGTTAAAGGCTCATCAAGATGTTAAGGTGCATAACATTGAAACTTTAAATCATGTTGAATCACTGGAGCTCTTTAGTTGGCATGTTTTCGGACAGGACTTTCCGATTGGAGGTTACATGGAACTTTCAGAAAGCATAGTAAAGCAGTGGAGGGCTTCCTTTAGCTCTTCAAACTTTGGGTTCTTCTCTATCAGGGCAAAGTATAGATGTATGGGGAAGTGCATTCAAGAAATTGGAAGTTATTCCAAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_8 NB-ARC TIR

Protein Analysis

426

Amino Acids

48.1

Weight (kDa)

8.86

Isoelectric Point (pI)

45.15

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000036)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G57630 AT1G72930 AT5G38344
fragaria_vesca FvH4_1g27020 FvH4_2g00931 FvH4_2g17330 FvH4_2g17330 FvH4_2g17340 FvH4_2g17350 FvH4_2g20690 FvH4_5g15301 FvH4_5g34194 FvH4_5g38530 FvH4_5g38740 FvH4_5g38740 FvH4_5g38740 FvH4_6g03800 FvH4_7g09791 FvH4_7g09800 FvH4_7g09800 FvH4_7g10510 FvH4_7g10520 FvH4_7g10520 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750
malus_domestica MD02G1217100.v1.1 MD02G1217200.v1.1 MD02G1217400.v1.1 MD02G1217600.v1.1 MD02G1264800.v1.1 MD02G1264900.v1.1 MD02G1302100.v1.1 MD04G1010700.v1.1 MD05G1006800.v1.1 MD05G1140100.v1.1 MD05G1140200.v1.1 MD05G1152200.v1.1 MD07G1073500.v1.1 MD07G1101700.v1.1 MD07G1102200.v1.1 MD07G1103200.v1.1 MD07G1112300.v1.1 MD08G1018200.v1.1 MD08G1018400.v1.1 MD08G1018800.v1.1 MD08G1019000.v1.1 MD08G1019100.v1.1 MD08G1019200.v1.1 MD08G1019300.v1.1 MD08G1019400.v1.1 MD08G1019600.v1.1 MD08G1019900.v1.1 MD08G1020000.v1.1 MD08G1020200.v1.1 MD08G1020500.v1.1 MD08G1020700.v1.1 MD08G1020800.v1.1 MD08G1040700.v1.1 MD11G1112400.v1.1 MD12G1068600.v1.1 MD12G1193200.v1.1 MD13G1050600.v1.1 MD15G1374900.v1.1 MD15G1375100.v1.1 MD15G1416500.v1.1 MD17G1072500.v1.1 MD17G1274200.v1.1 MD17G1274900.v1.1
prunus_persica Prupe.2G121000_v2.0.a1 Prupe.2G121000_v2.0.a1 Prupe.2G125800_v2.0.a1 Prupe.2G126000_v2.0.a1 Prupe.2G126100_v2.0.a1 Prupe.2G126200_v2.0.a1 Prupe.2G126300_v2.0.a1 Prupe.2G126400_v2.0.a1 Prupe.2G126500_v2.0.a1 Prupe.2G126600_v2.0.a1 Prupe.2G126700_v2.0.a1 Prupe.2G126700_v2.0.a1 Prupe.2G126800_v2.0.a1 Prupe.2G126900_v2.0.a1 Prupe.2G127000_v2.0.a1 Prupe.2G127000_v2.0.a1 Prupe.2G127000_v2.0.a1 Prupe.2G127000_v2.0.a1 Prupe.2G135500_v2.0.a1 Prupe.2G135600_v2.0.a1 Prupe.2G135700_v2.0.a1 Prupe.2G135700_v2.0.a1 Prupe.3G009800_v2.0.a1 Prupe.3G010200_v2.0.a1 Prupe.3G131000_v2.0.a1 Prupe.4G260800_v2.0.a1 Prupe.4G260900_v2.0.a1 Prupe.6G083100_v2.0.a1 Prupe.6G083200_v2.0.a1 Prupe.6G083400_v2.0.a1 Prupe.6G132100_v2.0.a1 Prupe.8G184900_v2.0.a1 Prupe.8G185200_v2.0.a1 Prupe.8G185300_v2.0.a1
pyrus_communis pycom02g17870 pycom02g17880 pycom02g19520 pycom02g22610 pycom02g22630 pycom02g22680 pycom05g13540 pycom05g14680 pycom07g04880 pycom07g04890 pycom07g05690 pycom07g05710 pycom07g05720 pycom07g05750 pycom07g05780 pycom07g06300 pycom07g08320 pycom07g08330 pycom07g08350 pycom07g08360 pycom07g08370 pycom07g08410 pycom07g08420 pycom07g08430 pycom07g08440 pycom07g08470 pycom07g08480 pycom07g08520 pycom07g08550 pycom07g08560 pycom07g08640 pycom07g08660 pycom07g08670 pycom07g08680 pycom07g08690 pycom07g08720 pycom07g08730 pycom07g08790 pycom07g08800 pycom07g08810 pycom07g08860 pycom07g08890 pycom07g09720 pycom08g01590 pycom08g01600 pycom08g01620 pycom08g01630 pycom08g01640 pycom10g12630 pycom15g16490 pycom17g07200 pycom17g07210 pycom17g07220 pycom17g11730 pycom17g11740 pycom17g27340 pycom17g27380
rosa_chinensis RchiOBHm_Chr1g0342571 RchiOBHm_Chr1g0346231 RchiOBHm_Chr1g0346831 RchiOBHm_Chr1g0346891 RchiOBHm_Chr1g0348311 RchiOBHm_Chr1g0348321 RchiOBHm_Chr1g0348331 RchiOBHm_Chr1g0348361 RchiOBHm_Chr1g0348371 RchiOBHm_Chr1g0348381 RchiOBHm_Chr1g0348401 RchiOBHm_Chr1g0348411 RchiOBHm_Chr1g0348421 RchiOBHm_Chr1g0348431 RchiOBHm_Chr2g0130881 RchiOBHm_Chr3g0487331 RchiOBHm_Chr5g0060371 RchiOBHm_Chr6g0246491 RchiOBHm_Chr6g0246871 RchiOBHm_Chr6g0250311 RchiOBHm_Chr6g0250781 RchiOBHm_Chr6g0251431 RchiOBHm_Chr6g0281871 RchiOBHm_Chr6g0281881 RchiOBHm_Chr6g0281931 RchiOBHm_Chr6g0281941 RchiOBHm_Chr6g0281951 RchiOBHm_Chr6g0281971 RchiOBHm_Chr6g0281981 RchiOBHm_Chr7g0240541 RchiOBHm_Chr7g0240631 RchiOBHm_Chr7g0240671
rosa_laevigata RLG00000000627 RLG00000000631 RLG00000000641 RLG00000000645 RLG00000000652 RLG00000000662 RLG00000000663 RLG00000000667 RLG00000000670 RLG00000000702 RLG00000001216 RLG00000001219 RLG00000007678 RLG00000012923 RLG00000012996 RLG00000013243 RLG00000017513 RLG00000017514 RLG00000020936 RLG00000022755 RLG00000023013 RLG00000028646 RLG00000028654 RLG00000028662 RLG00000028665 RLG00000028667 RLG00000028711 RLG00000028714 RLG00000028716 RLG00000028770 RLG00000028771 RLG00000028773 RLG00000028778 RLG00000028798 RLG00000028809 RLG00000028813 RLG00000029334 RLG00000030003 RLG00000033910 RLG00000034358 RLG00000035430
rosa_multiflora Rmu_co8031134.1_g000001 Rmu_co8092796.1_g000001 Rmu_co8130156.1_g000001 Rmu_co8325323.1_g000001 Rmu_co8424083.1_g000002 Rmu_sc0000008.1_g000003 Rmu_sc0000008.1_g000011 Rmu_sc0000008.1_g000015 Rmu_sc0000008.1_g000020 Rmu_sc0000091.1_g000015 Rmu_sc0000091.1_g000018 Rmu_sc0000091.1_g000029 Rmu_sc0000091.1_g000031 Rmu_sc0000391.1_g000004 Rmu_sc0001070.1_g000030 Rmu_sc0001293.1_g000016 Rmu_sc0001674.1_g000006 Rmu_sc0001731.1_g000002 Rmu_sc0001731.1_g000003 Rmu_sc0001731.1_g000005 Rmu_sc0001911.1_g000029 Rmu_sc0001913.1_g000038 Rmu_sc0001955.1_g000025 Rmu_sc0001992.1_g000022 Rmu_sc0001992.1_g000028 Rmu_sc0001992.1_g000031 Rmu_sc0002517.1_g000013 Rmu_sc0002517.1_g000017 Rmu_sc0002551.1_g000022 Rmu_sc0002551.1_g000029 Rmu_sc0002551.1_g000038 Rmu_sc0002705.1_g000015 Rmu_sc0002705.1_g000016 Rmu_sc0002882.1_g000055 Rmu_sc0003232.1_g000027 Rmu_sc0003363.1_g000037 Rmu_sc0003600.1_g000054 Rmu_sc0003918.1_g000011 Rmu_sc0004395.1_g000011 Rmu_sc0005071.1_g000004 Rmu_sc0005255.1_g000018 Rmu_sc0005327.1_g000004 Rmu_sc0005597.1_g000007 Rmu_sc0007060.1_g000007 Rmu_sc0007310.1_g000003 Rmu_sc0007383.1_g000014 Rmu_sc0007799.1_g000003 Rmu_sc0008477.1_g000016 Rmu_sc0010151.1_g000009 Rmu_sc0011217.1_g000005 Rmu_sc0016269.1_g000006 Rmu_sc0021495.1_g000001 Rmu_sc0027364.1_g000001 Rmu_sc0029432.1_g000001 Rmu_sc0041386.1_g000001 Rmu_ssc0000126.1_g000023 Rmu_ssc0000126.1_g000027
rosa_roxburghii Rroxscaffold_1G00006130 Rroxscaffold_1G00023320 Rroxscaffold_1G00038770 Rroxscaffold_2G00119800 Rroxscaffold_2G00121860 Rroxscaffold_3G00219780 Rroxscaffold_3G00219890 Rroxscaffold_4G00306740 Rroxscaffold_4G00306820 Rroxscaffold_4G00307000 Rroxscaffold_4G00307010 Rroxscaffold_4G00307020 Rroxscaffold_4G00308030 Rroxscaffold_4G00308070 Rroxscaffold_4G00308450 Rroxscaffold_4G00308460 Rroxscaffold_4G00315320 Rroxscaffold_5G00352470 Rroxscaffold_5G00371420 Rroxscaffold_6G00392300 Rroxscaffold_6G00394870 Rroxscaffold_6G00394890 Rroxscaffold_7G00186700 Rroxscaffold_7G00194980 Rroxscaffold_7G00216840
rosa_rugosa Rorug01G0076100 Rorug01G0128100 Rorug01G0149000.1 Rorug01G0149500.1 Rorug01G0180000 Rorug01G0180100 Rorug01G0182900 Rorug01G0184000 Rorug01G0184100 Rorug01G0184300 Rorug01G0184600 Rorug01G0184700 Rorug01G0184700 Rorug01G0184900 Rorug01G0185000 Rorug01G0185100 Rorug01G0189300 Rorug01G0194100 Rorug01G0194100 Rorug01G0194200 Rorug01G0194400 Rorug01G0194400 Rorug01G0194500 Rorug02G0090400 Rorug02G0090400 Rorug03G0233000 Rorug03G0233100 Rorug05G0178600 Rorug05G0178700 Rorug05G0579200 Rorug06G0144100 Rorug06G0144300 Rorug06G0144300 Rorug06G0179300 Rorug06G0208800 Rorug07G0323500 Rorug07G0337000
rosa_samantha Rh1AG046100 Rh1AG201400 Rh1AG201800 Rh1AG202100 Rh1AG202600 Rh1AG211500 Rh1AG211800 Rh1AG212200 Rh1AG212500 Rh1AG212600 Rh1AG214200 Rh1BG168000 Rh1BG168300 Rh1BG168500 Rh1BG177900 Rh1BG178200 Rh1BG178300 Rh1BG178800 Rh1BG178900 Rh1CG080900 Rh1CG183300 Rh1CG186300 Rh1CG186700 Rh1CG187000 Rh1CG187300 Rh1CG193400 Rh1CG195800 Rh1CG196000 Rh1CG196100 Rh1CG196400 Rh1CG196500 Rh1CG196800 Rh1CG198800 Rh1CG442600 Rh1DG086200 Rh1DG155400 Rh1DG156200 Rh1DG194000 Rh1DG194300 Rh1DG194900 Rh1DG197000 Rh1DG198800 Rh1DG199000 Rh1DG199200 Rh1DG202000 Rh1DG203900 Rh1DG207600 Rh1DG207900 Rh1DG208000 Rh1DG208500 Rh1DG208600 Rh1DG208700 Rh3CG339100 Rh5AG106500 Rh5AG264800 Rh5AG265300 Rh5CG302800 Rh5DG277900 Rh6AG257600 Rh6AG257700 Rh6BG260500 Rh6BG260700 Rh6CG259600 Rh6CG259700 Rh6DG252100 Rh7DG126900
rosa_wichuraiana Rw0G005780 Rw0G007540 Rw0G007550 Rw0G007560 Rw0G009390 Rw1G016900 Rw1G016930 Rw1G016940 Rw1G016970 Rw1G017860 Rw1G017890 Rw1G017900 Rw1G017910 Rw1G017920 Rw1G017960 Rw1G017970 Rw1G017980 Rw1G018150 Rw4G000830 Rw5G009290 Rw5G018950 Rw5G024850 Rw5G024870 Rw5G040460 Rw6G022290 Rw7G041020 Rw7G041200 Rw7G041360 Rw7G041450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1007
Acc16I TGCGCA 1 cut(s) 711
AccB1I GGYRCC 1 cut(s) 270
AclWI GGATC 6 cut(s) 194, 286, 642, 655, 884, 945
AcsI RAATTY 2 cut(s) 730, 777
AcuI CTGAAG 1 cut(s) 61
AcvI CACGTG 1 cut(s) 64
AfaI GTAC 2 cut(s) 810, 915
AfiI CCNNNNNNNGG 2 cut(s) 361, 1136
AflII CTTAAG 1 cut(s) 577
AflIII ACRYGT 1 cut(s) 63
AhlI ACTAGT 1 cut(s) 283
AjnI CCWGG 1 cut(s) 988
AjuI GAANNNNNNNTTGG 2 cut(s) 961, 993
AluBI AGCT 8 cut(s) 75, 199, 384, 506, 562, 903, 1096, 1191
AluI AGCT 8 cut(s) 75, 199, 384, 506, 562, 903, 1096, 1191
Alw21I GWGCWC 1 cut(s) 1098
Alw26I GTCTC 1 cut(s) 150
AlwI GGATC 6 cut(s) 194, 286, 642, 655, 884, 945
AoxI GGCC 2 cut(s) 3, 309
ApeKI GCWGC 1 cut(s) 455
ApoI RAATTY 2 cut(s) 730, 777
AseI ATTAAT 1 cut(s) 627
Asp700I GAANNNNTTC 1 cut(s) 1267
AspLEI GCGC 2 cut(s) 712, 948
AspS9I GGNCC 2 cut(s) 4, 309
AsuHPI GGTGA 2 cut(s) 95, 376
BaeGI GKGCMC 1 cut(s) 516
BamHI GGATCC 1 cut(s) 647
BanI GGYRCC 1 cut(s) 270
BanII GRGCYC 1 cut(s) 1098
BauI CACGAG 1 cut(s) 515
BbrPI CACGTG 1 cut(s) 64
BbsI GAAGAC 4 cut(s) 93, 252, 331, 704
Bbv12I GWGCWC 1 cut(s) 1098
BbvI GCAGC 1 cut(s) 467
BccI CCATC 5 cut(s) 364, 441, 481, 503, 638
BciT130I CCWGG 1 cut(s) 990
BclI TGATCA 1 cut(s) 319
BcoDI GTCTC 1 cut(s) 150
BcuI ACTAGT 1 cut(s) 283
BfaI CTAG 3 cut(s) 284, 402, 1014
BfmI CTRYAG 1 cut(s) 46
BfrI CTTAAG 1 cut(s) 577
BglII AGATCT 2 cut(s) 14, 475
BisI GCNGC 1 cut(s) 456
BlsI GCNGC 1 cut(s) 457
BmcAI AGTACT 1 cut(s) 915
Bme1390I CCNGG 1 cut(s) 990
BmgT120I GGNCC 2 cut(s) 4, 309
BmiI GGNNCC 2 cut(s) 272, 649
BmrFI CCNGG 1 cut(s) 990
BmsI GCATC 1 cut(s) 946
BpiI GAAGAC 4 cut(s) 93, 252, 331, 704
BpmI CTGGAG 2 cut(s) 221, 1112
BpuEI CTTGAG 2 cut(s) 91, 191
BsaAI YACGTR 1 cut(s) 64
BsaBI GATNNNNATC 2 cut(s) 602, 936
BsaJI CCNNGG 1 cut(s) 988
Bsc4I CCNNNNNNNGG 2 cut(s) 361, 1136
Bse1I ACTGG 2 cut(s) 335, 1095
Bse3DI GCAATG 1 cut(s) 705
Bse8I GATNNNNATC 2 cut(s) 602, 936
BseBI CCWGG 1 cut(s) 990
BseDI CCNNGG 1 cut(s) 988
BseGI GGATG 2 cut(s) 452, 492
BseJI GATNNNNATC 2 cut(s) 602, 936
BseLI CCNNNNNNNGG 2 cut(s) 361, 1136
BseMI GCAATG 1 cut(s) 705
BseMII CTCAG 1 cut(s) 351
BseNI ACTGG 2 cut(s) 335, 1095
BseRI GAGGAG 1 cut(s) 19
BseSI GKGCMC 1 cut(s) 516
BseXI GCAGC 1 cut(s) 467
BshFI GGCC 2 cut(s) 5, 311
BshNI GGYRCC 1 cut(s) 270
BsiHKAI GWGCWC 1 cut(s) 1098
BslI CCNNNNNNNGG 2 cut(s) 361, 1136
BsmAI GTCTC 1 cut(s) 150
BsmBI CGTCTC 1 cut(s) 150
BsmI GAATGC 1 cut(s) 1248
BsnI GGCC 2 cut(s) 5, 311
Bsp1286I GDGCHC 2 cut(s) 516, 1098
Bsp143I GATC 9 cut(s) 14, 186, 291, 319, 419, 475, 647, 876, 937
BspANI GGCC 2 cut(s) 5, 311
BspCNI CTCAG 1 cut(s) 352
BspLI GGNNCC 2 cut(s) 272, 649
BspPI GGATC 6 cut(s) 194, 286, 642, 655, 884, 945
BspQI GCTCTTC 1 cut(s) 1198
BspT107I GGYRCC 1 cut(s) 270
BspTI CTTAAG 1 cut(s) 577
BsrDI GCAATG 1 cut(s) 705
BsrI ACTGG 2 cut(s) 335, 1095
BssECI CCNNGG 1 cut(s) 988
BssMI GATC 9 cut(s) 14, 186, 291, 319, 419, 475, 647, 876, 937
BssSI CACGAG 1 cut(s) 515
Bst2BI CACGAG 1 cut(s) 515
Bst2UI CCWGG 1 cut(s) 990
Bst4CI ACNGT 1 cut(s) 47
Bst6I CTCTTC 2 cut(s) 37, 1198
BstAFI CTTAAG 1 cut(s) 577
BstBAI YACGTR 1 cut(s) 64
BstC8I GCNNGC 2 cut(s) 560, 572
BstDEI CTNAG 4 cut(s) 360, 563, 882, 965
BstF5I GGATG 2 cut(s) 452, 492
BstHHI GCGC 2 cut(s) 712, 948
BstKTI GATC 9 cut(s) 17, 189, 294, 322, 422, 478, 650, 879, 940
BstMAI GTCTC 1 cut(s) 150
BstMBI GATC 9 cut(s) 14, 186, 291, 319, 419, 475, 647, 876, 937
BstMWI GCNNNNNNNGC 1 cut(s) 479
BstNI CCWGG 1 cut(s) 990
BstNSI RCATGY 1 cut(s) 1112
BstSCI CCNGG 1 cut(s) 988
BstSFI CTRYAG 1 cut(s) 46
BstSLI GKGCMC 1 cut(s) 516
BstV1I GCAGC 1 cut(s) 467
BstV2I GAAGAC 4 cut(s) 93, 252, 331, 704
BstX2I RGATCY 4 cut(s) 14, 291, 475, 647
BstYI RGATCY 4 cut(s) 14, 291, 475, 647
BsuRI GGCC 2 cut(s) 5, 311
BtsCI GGATG 2 cut(s) 452, 492
BtsI GCAGTG 1 cut(s) 1178
BtsIMutI CAGTG 2 cut(s) 1088, 1178
Cac8I GCNNGC 2 cut(s) 560, 572
CfoI GCGC 2 cut(s) 712, 948
Cfr13I GGNCC 2 cut(s) 4, 309
CseI GACGC 1 cut(s) 246
Csp6I GTAC 2 cut(s) 809, 914
CviAII CATG 5 cut(s) 323, 633, 1079, 1109, 1144
CviQI GTAC 2 cut(s) 809, 914
DdeI CTNAG 4 cut(s) 360, 563, 882, 965
DpnI GATC 9 cut(s) 16, 188, 293, 321, 421, 477, 649, 878, 939
DpnII GATC 9 cut(s) 14, 186, 291, 319, 419, 475, 647, 876, 937
DraI TTTAAA 1 cut(s) 1074
Eam1104I CTCTTC 2 cut(s) 37, 1198
EarI CTCTTC 2 cut(s) 37, 1198
Ecl136II GAGCTC 1 cut(s) 1096
Eco24I GRGCYC 1 cut(s) 1098
Eco53kI GAGCTC 1 cut(s) 1096
Eco57I CTGAAG 1 cut(s) 61
Eco72I CACGTG 1 cut(s) 64
EcoICRI GAGCTC 1 cut(s) 1096
EcoO109I RGGNCCY 1 cut(s) 309
EcoRII CCWGG 1 cut(s) 988
EcoT38I GRGCYC 1 cut(s) 1098
Esp3I CGTCTC 1 cut(s) 150
FaeI CATG 5 cut(s) 326, 636, 1082, 1112, 1147
FalI AAGNNNNNCTT 2 cut(s) 903, 935
FatI CATG 5 cut(s) 322, 632, 1078, 1108, 1143
FauNDI CATATG 2 cut(s) 665, 942
FbaI TGATCA 1 cut(s) 319
Fnu4HI GCNGC 1 cut(s) 456
FokI GGATG 2 cut(s) 459, 499
FriOI GRGCYC 1 cut(s) 1098
Fsp4HI GCNGC 1 cut(s) 456
FspBI CTAG 3 cut(s) 284, 402, 1014
FspI TGCGCA 1 cut(s) 711
GlaI GCGC 2 cut(s) 711, 947
GluI GCNGC 1 cut(s) 456
GsuI CTGGAG 2 cut(s) 221, 1112
HaeIII GGCC 2 cut(s) 5, 311
HgaI GACGC 1 cut(s) 246
HhaI GCGC 2 cut(s) 712, 948
Hin1II CATG 5 cut(s) 326, 636, 1082, 1112, 1147
Hin6I GCGC 2 cut(s) 710, 946
HinP1I GCGC 2 cut(s) 710, 946
HindIII AAGCTT 1 cut(s) 382
HinfI GANTC 2 cut(s) 603, 1085
HphI GGTGA 2 cut(s) 95, 376
Hpy166II GTNNAC 1 cut(s) 721
Hpy188III TCNNGA 8 cut(s) 20, 70, 222, 244, 738, 926, 1043, 1253
Hpy8I GTNNAC 1 cut(s) 721
Hpy99I CGWCG 1 cut(s) 164
HpyAV CCTTC 3 cut(s) 176, 548, 740
HpyCH4III ACNGT 1 cut(s) 47
HpyCH4IV ACGT 1 cut(s) 63
HpyCH4V TGCA 6 cut(s) 473, 640, 671, 817, 1057, 1248
HpyF10VI GCNNNNNNNGC 1 cut(s) 479
HpyF3I CTNAG 4 cut(s) 360, 563, 882, 965
HpySE526I ACGT 1 cut(s) 63
Hsp92II CATG 5 cut(s) 326, 636, 1082, 1112, 1147
HspAI GCGC 2 cut(s) 710, 946
Ksp22I TGATCA 1 cut(s) 319
Kzo9I GATC 9 cut(s) 14, 186, 291, 319, 419, 475, 647, 876, 937
LguI GCTCTTC 1 cut(s) 1198
LmnI GCTCC 1 cut(s) 1093
Lsp1109I GCAGC 1 cut(s) 467
LweI GCATC 1 cut(s) 946
MaeI CTAG 3 cut(s) 284, 402, 1014
MaeII ACGT 1 cut(s) 63
MaeIII GTNAC 1 cut(s) 1139
MalI GATC 9 cut(s) 16, 188, 293, 321, 421, 477, 649, 878, 939
MboI GATC 9 cut(s) 14, 186, 291, 319, 419, 475, 647, 876, 937
MboII GAAGA 9 cut(s) 24, 98, 252, 301, 331, 709, 762, 1185, 1201
MflI RGATCY 4 cut(s) 14, 291, 475, 647
MhlI GDGCHC 2 cut(s) 516, 1098
MmeI TCCRAC 1 cut(s) 238
MroXI GAANNNNTTC 1 cut(s) 1267
MseI TTAA 8 cut(s) 531, 543, 578, 627, 888, 1031, 1050, 1073
MslI CAYNNNNRTG 1 cut(s) 1044
MspCI CTTAAG 1 cut(s) 577
MspR9I CCNGG 1 cut(s) 990
Mva1269I GAATGC 1 cut(s) 1248
MvaI CCWGG 1 cut(s) 990
MwoI GCNNNNNNNGC 1 cut(s) 479
NdeI CATATG 2 cut(s) 665, 942
NdeII GATC 9 cut(s) 14, 186, 291, 319, 419, 475, 647, 876, 937
NlaIII CATG 5 cut(s) 326, 636, 1082, 1112, 1147
NlaIV GGNNCC 2 cut(s) 272, 649
NsbI TGCGCA 1 cut(s) 711
NspI RCATGY 1 cut(s) 1112
PciSI GCTCTTC 1 cut(s) 1198
PctI GAATGC 1 cut(s) 1248
PdmI GAANNNNTTC 1 cut(s) 1267
PfeI GAWTC 2 cut(s) 603, 1085
PkrI GCNGC 1 cut(s) 457
PmaCI CACGTG 1 cut(s) 64
PmlI CACGTG 1 cut(s) 64
Ppu21I YACGTR 1 cut(s) 64
PshBI ATTAAT 1 cut(s) 627
PsiI TTATAA 1 cut(s) 1007
Psp124BI GAGCTC 1 cut(s) 1098
Psp6I CCWGG 1 cut(s) 988
PspCI CACGTG 1 cut(s) 64
PspGI CCWGG 1 cut(s) 988
PspN4I GGNNCC 2 cut(s) 272, 649
PspPI GGNCC 2 cut(s) 4, 309
PsuI RGATCY 4 cut(s) 14, 291, 475, 647
RsaI GTAC 2 cut(s) 810, 915
RsaNI GTAC 2 cut(s) 809, 914
RseI CAYNNNNRTG 1 cut(s) 1044
SacI GAGCTC 1 cut(s) 1098
SapI GCTCTTC 1 cut(s) 1198
SaqAI TTAA 8 cut(s) 531, 543, 578, 627, 888, 1031, 1050, 1073
SatI GCNGC 1 cut(s) 456
Sau3AI GATC 9 cut(s) 14, 186, 291, 319, 419, 475, 647, 876, 937
Sau96I GGNCC 2 cut(s) 4, 309
ScaI AGTACT 1 cut(s) 915
ScrFI CCNGG 1 cut(s) 990
SduI GDGCHC 2 cut(s) 516, 1098
SfaNI GCATC 1 cut(s) 946
SfcI CTRYAG 1 cut(s) 46
SmiMI CAYNNNNRTG 1 cut(s) 1044
SmlI CTYRAG 4 cut(s) 18, 70, 170, 577
SmoI CTYRAG 4 cut(s) 18, 70, 170, 577
SpeI ACTAGT 1 cut(s) 283
SspI AATATT 1 cut(s) 865
SspMI CTAG 3 cut(s) 284, 402, 1014
SstI GAGCTC 1 cut(s) 1098
StyD4I CCNGG 1 cut(s) 988
TaaI ACNGT 1 cut(s) 47
TaiI ACGT 1 cut(s) 66
TaqI TCGA 2 cut(s) 613, 927
TatI WGTACW 2 cut(s) 808, 913
TfiI GAWTC 2 cut(s) 603, 1085
Tru1I TTAA 8 cut(s) 531, 543, 578, 627, 888, 1031, 1050, 1073
Tru9I TTAA 8 cut(s) 531, 543, 578, 627, 888, 1031, 1050, 1073
TscAI CASTG 2 cut(s) 1095, 1178
TseI GCWGC 1 cut(s) 455
TspDTI ATGAA 4 cut(s) 180, 516, 621, 986
TspRI CASTG 2 cut(s) 1095, 1178
Vha464I CTTAAG 1 cut(s) 577
VspI ATTAAT 1 cut(s) 627
XapI RAATTY 2 cut(s) 730, 777
XceI RCATGY 1 cut(s) 1112
XmnI GAANNNNTTC 1 cut(s) 1267
XspI CTAG 3 cut(s) 284, 402, 1014
ZrmI AGTACT 1 cut(s) 915
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.