TMV resistance protein N-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 2 cut(s) | 354, 942 |
| Acc16I | TGCGCA | 1 cut(s) | 575 |
| AccB1I | GGYRCC | 3 cut(s) | 15, 273, 372 |
| AccI | GTMKAC | 2 cut(s) | 670, 942 |
| AccII | CGCG | 2 cut(s) | 226, 260 |
| AccIII | TCCGGA | 1 cut(s) | 266 |
| AciI | CCGC | 3 cut(s) | 1188, 1518, 1549 |
| AclWI | GGATC | 4 cut(s) | 320, 350, 661, 1050 |
| AcsI | RAATTY | 8 cut(s) | 626, 719, 1212, 1354, 1718, 1754, 2175, 2351 |
| AcuI | CTGAAG | 1 cut(s) | 1096 |
| AcvI | CACGTG | 2 cut(s) | 1145, 2267 |
| AcyI | GRCGYC | 2 cut(s) | 351, 939 |
| AfaI | GTAC | 6 cut(s) | 515, 1856, 2277, 2544, 2600, 2610 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 369, 1568, 1579, 2228 |
| AflIII | ACRYGT | 2 cut(s) | 66, 258 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 259 |
| AjiI | CACGTC | 1 cut(s) | 67 |
| AjnI | CCWGG | 1 cut(s) | 994 |
| Alw21I | GWGCWC | 1 cut(s) | 1264 |
| Alw26I | GTCTC | 2 cut(s) | 153, 1825 |
| Alw44I | GTGCAC | 1 cut(s) | 1260 |
| AlwI | GGATC | 4 cut(s) | 320, 350, 661, 1050 |
| Ama87I | CYCGRG | 1 cut(s) | 618 |
| Aor13HI | TCCGGA | 1 cut(s) | 266 |
| AoxI | GGCC | 1 cut(s) | 1570 |
| ApaLI | GTGCAC | 1 cut(s) | 1260 |
| ApeKI | GCWGC | 3 cut(s) | 125, 455, 2103 |
| ApoI | RAATTY | 8 cut(s) | 626, 719, 1212, 1354, 1718, 1754, 2175, 2351 |
| AseI | ATTAAT | 2 cut(s) | 633, 681 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 613, 1719 |
| AspLEI | GCGC | 2 cut(s) | 576, 759 |
| AspS9I | GGNCC | 2 cut(s) | 1570, 1927 |
| AsuHPI | GGTGA | 3 cut(s) | 420, 824, 2671 |
| AvaI | CYCGRG | 1 cut(s) | 618 |
| AvaII | GGWCC | 1 cut(s) | 1927 |
| BaeGI | GKGCMC | 1 cut(s) | 1264 |
| BanI | GGYRCC | 3 cut(s) | 15, 273, 372 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 846, 878 |
| BbrPI | CACGTG | 2 cut(s) | 1145, 2267 |
| BbsI | GAAGAC | 4 cut(s) | 255, 283, 334, 1877 |
| Bbv12I | GWGCWC | 1 cut(s) | 1264 |
| BbvI | GCAGC | 3 cut(s) | 137, 467, 2090 |
| BceAI | ACGGC | 1 cut(s) | 770 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1109, 1143 |
| BciT130I | CCWGG | 1 cut(s) | 996 |
| BclI | TGATCA | 1 cut(s) | 1486 |
| BcoDI | GTCTC | 2 cut(s) | 153, 1825 |
| BfaI | CTAG | 7 cut(s) | 6, 1020, 1418, 1539, 1914, 2162, 2579 |
| BfmI | CTRYAG | 2 cut(s) | 739, 1242 |
| BfoI | RGCGCY | 1 cut(s) | 760 |
| BglII | AGATCT | 2 cut(s) | 475, 2359 |
| BisI | GCNGC | 3 cut(s) | 126, 456, 2104 |
| BlsI | GCNGC | 3 cut(s) | 127, 457, 2105 |
| Bme1390I | CCNGG | 1 cut(s) | 996 |
| Bme18I | GGWCC | 1 cut(s) | 1927 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 259 |
| BmeT110I | CYCGRG | 1 cut(s) | 618 |
| BmgBI | CACGTC | 1 cut(s) | 67 |
| BmgT120I | GGNCC | 2 cut(s) | 1570, 1927 |
| BmiI | GGNNCC | 5 cut(s) | 17, 275, 374, 1929, 2450 |
| BmrFI | CCNGG | 1 cut(s) | 996 |
| BmrI | ACTGGG | 1 cut(s) | 1770 |
| BmsI | GCATC | 8 cut(s) | 889, 952, 1175, 1315, 1460, 1554, 2406, 2617 |
| BmuI | ACTGGG | 1 cut(s) | 1770 |
| BpiI | GAAGAC | 4 cut(s) | 255, 283, 334, 1877 |
| BpmI | CTGGAG | 1 cut(s) | 1286 |
| Bpu10I | CCTNAGC | 1 cut(s) | 2408 |
| BpuEI | CTTGAG | 4 cut(s) | 94, 388, 1849, 2311 |
| BsaAI | YACGTR | 2 cut(s) | 1145, 2267 |
| BsaHI | GRCGYC | 2 cut(s) | 351, 939 |
| BsaJI | CCNNGG | 4 cut(s) | 1578, 1610, 2401, 2670 |
| BsaWI | WCCGGW | 1 cut(s) | 266 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 369, 1568, 1579, 2228 |
| Bse1I | ACTGG | 7 cut(s) | 338, 917, 1107, 1269, 1776, 1929, 2212 |
| Bse3DI | GCAATG | 3 cut(s) | 711, 1368, 1538 |
| BseAI | TCCGGA | 1 cut(s) | 266 |
| BseBI | CCWGG | 1 cut(s) | 996 |
| BseDI | CCNNGG | 4 cut(s) | 1578, 1610, 2401, 2670 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 369, 1568, 1579, 2228 |
| BseMI | GCAATG | 3 cut(s) | 711, 1368, 1538 |
| BseMII | CTCAG | 3 cut(s) | 333, 1324, 1635 |
| BseNI | ACTGG | 7 cut(s) | 338, 917, 1107, 1269, 1776, 1929, 2212 |
| BseRI | GAGGAG | 2 cut(s) | 19, 307 |
| BseSI | GKGCMC | 1 cut(s) | 1264 |
| BseXI | GCAGC | 3 cut(s) | 137, 467, 2090 |
| BsgI | GTGCAG | 1 cut(s) | 1047 |
| Bsh1236I | CGCG | 2 cut(s) | 226, 260 |
| BshFI | GGCC | 1 cut(s) | 1572 |
| BshNI | GGYRCC | 3 cut(s) | 15, 273, 372 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1264 |
| BsiHKCI | CYCGRG | 1 cut(s) | 618 |
| BsiSI | CCGG | 1 cut(s) | 267 |
| BslFI | GGGAC | 1 cut(s) | 1913 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 369, 1568, 1579, 2228 |
| BsmAI | GTCTC | 2 cut(s) | 153, 1825 |
| BsmFI | GGGAC | 1 cut(s) | 1913 |
| BsnI | GGCC | 1 cut(s) | 1572 |
| BsoBI | CYCGRG | 1 cut(s) | 618 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1264 |
| Bsp13I | TCCGGA | 1 cut(s) | 266 |
| Bsp68I | TCGCGA | 1 cut(s) | 226 |
| BspACI | CCGC | 3 cut(s) | 1188, 1518, 1549 |
| BspANI | GGCC | 1 cut(s) | 1572 |
| BspCNI | CTCAG | 3 cut(s) | 332, 1323, 1634 |
| BspEI | TCCGGA | 1 cut(s) | 266 |
| BspFNI | CGCG | 2 cut(s) | 226, 260 |
| BspHI | TCATGA | 2 cut(s) | 1045, 2196 |
| BspLI | GGNNCC | 5 cut(s) | 17, 275, 374, 1929, 2450 |
| BspPI | GGATC | 4 cut(s) | 320, 350, 661, 1050 |
| BspQI | GCTCTTC | 1 cut(s) | 1212 |
| BspT107I | GGYRCC | 3 cut(s) | 15, 273, 372 |
| BsrDI | GCAATG | 3 cut(s) | 711, 1368, 1538 |
| BsrI | ACTGG | 7 cut(s) | 338, 917, 1107, 1269, 1776, 1929, 2212 |
| BssECI | CCNNGG | 4 cut(s) | 1578, 1610, 2401, 2670 |
| BssNAI | GTATAC | 1 cut(s) | 671 |
| BssNI | GRCGYC | 2 cut(s) | 351, 939 |
| BssT1I | CCWWGG | 2 cut(s) | 1578, 1610 |
| Bst1107I | GTATAC | 1 cut(s) | 671 |
| Bst2UI | CCWGG | 1 cut(s) | 996 |
| Bst4CI | ACNGT | 6 cut(s) | 222, 589, 1441, 1483, 1823, 1876 |
| Bst6I | CTCTTC | 5 cut(s) | 37, 844, 1115, 1212, 1385 |
| BstACI | GRCGYC | 2 cut(s) | 351, 939 |
| BstBAI | YACGTR | 2 cut(s) | 1145, 2267 |
| BstC8I | GCNNGC | 3 cut(s) | 572, 1122, 1518 |
| BstEII | GGTNACC | 1 cut(s) | 2333 |
| BstFNI | CGCG | 2 cut(s) | 226, 260 |
| BstH2I | RGCGCY | 1 cut(s) | 760 |
| BstHHI | GCGC | 2 cut(s) | 576, 759 |
| BstMAI | GTCTC | 2 cut(s) | 153, 1825 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 202, 722, 1542, 2413 |
| BstNI | CCWGG | 1 cut(s) | 996 |
| BstNSI | RCATGY | 4 cut(s) | 574, 1124, 1377, 2566 |
| BstPI | GGTNACC | 1 cut(s) | 2333 |
| BstSCI | CCNGG | 1 cut(s) | 994 |
| BstSFI | CTRYAG | 2 cut(s) | 739, 1242 |
| BstSLI | GKGCMC | 1 cut(s) | 1264 |
| BstUI | CGCG | 2 cut(s) | 226, 260 |
| BstV1I | GCAGC | 3 cut(s) | 137, 467, 2090 |
| BstV2I | GAAGAC | 4 cut(s) | 255, 283, 334, 1877 |
| BstX2I | RGATCY | 3 cut(s) | 312, 475, 2359 |
| BstYI | RGATCY | 3 cut(s) | 312, 475, 2359 |
| BstZ17I | GTATAC | 1 cut(s) | 671 |
| BsuRI | GGCC | 1 cut(s) | 1572 |
| BtrI | CACGTC | 1 cut(s) | 67 |
| BtsIMutI | CAGTG | 5 cut(s) | 880, 1100, 1262, 1783, 2205 |
| BtuMI | TCGCGA | 1 cut(s) | 226 |
| Cac8I | GCNNGC | 3 cut(s) | 572, 1122, 1518 |
| CciI | TCATGA | 2 cut(s) | 1045, 2196 |
| CfoI | GCGC | 2 cut(s) | 576, 759 |
| Cfr13I | GGNCC | 2 cut(s) | 1570, 1927 |
| CseI | GACGC | 2 cut(s) | 249, 1551 |
| Csp6I | GTAC | 6 cut(s) | 514, 1855, 2276, 2543, 2599, 2609 |
| CviAII | CATG | 9 cut(s) | 326, 571, 639, 1046, 1121, 1374, 1982, 2197, 2563 |
| CviQI | GTAC | 6 cut(s) | 514, 1855, 2276, 2543, 2599, 2609 |
| DraI | TTTAAA | 2 cut(s) | 2154, 2283 |
| DriI | GACNNNNNGTC | 1 cut(s) | 259 |
| Eam1104I | CTCTTC | 5 cut(s) | 37, 844, 1115, 1212, 1385 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 259 |
| EarI | CTCTTC | 5 cut(s) | 37, 844, 1115, 1212, 1385 |
| EciI | GGCGGA | 1 cut(s) | 1538 |
| Eco130I | CCWWGG | 2 cut(s) | 1578, 1610 |
| Eco47I | GGWCC | 1 cut(s) | 1927 |
| Eco57I | CTGAAG | 1 cut(s) | 1096 |
| Eco72I | CACGTG | 2 cut(s) | 1145, 2267 |
| Eco88I | CYCGRG | 1 cut(s) | 618 |
| Eco91I | GGTNACC | 1 cut(s) | 2333 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1570 |
| EcoO65I | GGTNACC | 1 cut(s) | 2333 |
| EcoRII | CCWGG | 1 cut(s) | 994 |
| EcoT14I | CCWWGG | 2 cut(s) | 1578, 1610 |
| EcoT22I | ATGCAT | 3 cut(s) | 1590, 1651, 2399 |
| ErhI | CCWWGG | 2 cut(s) | 1578, 1610 |
| FaeI | CATG | 9 cut(s) | 329, 574, 642, 1049, 1124, 1377, 1985, 2200, 2566 |
| FaqI | GGGAC | 1 cut(s) | 1913 |
| FatI | CATG | 9 cut(s) | 325, 570, 638, 1045, 1120, 1373, 1981, 2196, 2562 |
| FauI | CCCGC | 1 cut(s) | 1525 |
| FauNDI | CATATG | 2 cut(s) | 948, 1590 |
| FbaI | TGATCA | 1 cut(s) | 1486 |
| FblI | GTMKAC | 2 cut(s) | 670, 942 |
| Fnu4HI | GCNGC | 3 cut(s) | 126, 456, 2104 |
| Fsp4HI | GCNGC | 3 cut(s) | 126, 456, 2104 |
| FspAI | RTGCGCAY | 1 cut(s) | 575 |
| FspBI | CTAG | 7 cut(s) | 6, 1020, 1418, 1539, 1914, 2162, 2579 |
| FspI | TGCGCA | 1 cut(s) | 575 |
| GlaI | GCGC | 2 cut(s) | 575, 758 |
| GluI | GCNGC | 3 cut(s) | 126, 456, 2104 |
| GsuI | CTGGAG | 1 cut(s) | 1286 |
| HaeII | RGCGCY | 1 cut(s) | 760 |
| HaeIII | GGCC | 1 cut(s) | 1572 |
| HapII | CCGG | 1 cut(s) | 267 |
| HgaI | GACGC | 2 cut(s) | 249, 1551 |
| HhaI | GCGC | 2 cut(s) | 576, 759 |
| Hin1I | GRCGYC | 2 cut(s) | 351, 939 |
| Hin1II | CATG | 9 cut(s) | 329, 574, 642, 1049, 1124, 1377, 1985, 2200, 2566 |
| Hin6I | GCGC | 2 cut(s) | 574, 757 |
| HinP1I | GCGC | 2 cut(s) | 574, 757 |
| HincII | GTYRAC | 3 cut(s) | 532, 943, 2218 |
| HindII | GTYRAC | 3 cut(s) | 532, 943, 2218 |
| HindIII | AAGCTT | 2 cut(s) | 2048, 2642 |
| HpaII | CCGG | 1 cut(s) | 267 |
| HphI | GGTGA | 3 cut(s) | 420, 824, 2671 |
| Hpy166II | GTNNAC | 7 cut(s) | 532, 671, 943, 1069, 1262, 1996, 2218 |
| Hpy8I | GTNNAC | 7 cut(s) | 532, 671, 943, 1069, 1262, 1996, 2218 |
| Hpy99I | CGWCG | 3 cut(s) | 353, 356, 944 |
| HpyAV | CCTTC | 8 cut(s) | 179, 369, 378, 839, 1373, 1561, 1868, 2456 |
| HpyCH4III | ACNGT | 6 cut(s) | 222, 589, 1441, 1483, 1823, 1876 |
| HpyCH4IV | ACGT | 7 cut(s) | 66, 152, 351, 939, 1144, 1692, 2266 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 202, 722, 1542, 2413 |
| HpySE526I | ACGT | 7 cut(s) | 66, 152, 351, 939, 1144, 1692, 2266 |
| Hsp92I | GRCGYC | 2 cut(s) | 351, 939 |
| Hsp92II | CATG | 9 cut(s) | 329, 574, 642, 1049, 1124, 1377, 1985, 2200, 2566 |
| HspAI | GCGC | 2 cut(s) | 574, 757 |
| Kpn2I | TCCGGA | 1 cut(s) | 266 |
| Ksp22I | TGATCA | 1 cut(s) | 1486 |
| LguI | GCTCTTC | 1 cut(s) | 1212 |
| LmnI | GCTCC | 2 cut(s) | 2076, 2454 |
| Lsp1109I | GCAGC | 3 cut(s) | 137, 467, 2090 |
| LweI | GCATC | 8 cut(s) | 889, 952, 1175, 1315, 1460, 1554, 2406, 2617 |
| MaeI | CTAG | 7 cut(s) | 6, 1020, 1418, 1539, 1914, 2162, 2579 |
| MaeII | ACGT | 7 cut(s) | 66, 152, 351, 939, 1144, 1692, 2266 |
| MaeIII | GTNAC | 6 cut(s) | 642, 1477, 1688, 1823, 2333, 2518 |
| MfeI | CAATTG | 1 cut(s) | 2437 |
| MflI | RGATCY | 3 cut(s) | 312, 475, 2359 |
| MhlI | GDGCHC | 1 cut(s) | 1264 |
| MluI | ACGCGT | 1 cut(s) | 258 |
| MlyI | GAGTC | 5 cut(s) | 527, 1302, 1994, 2156, 2418 |
| MmeI | TCCRAC | 3 cut(s) | 241, 370, 2490 |
| Mph1103I | ATGCAT | 3 cut(s) | 1590, 1651, 2399 |
| MroI | TCCGGA | 1 cut(s) | 266 |
| MroXI | GAANNNNTTC | 2 cut(s) | 613, 1719 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1143, 2687 |
| MspI | CCGG | 1 cut(s) | 267 |
| MspR9I | CCNGG | 1 cut(s) | 996 |
| MunI | CAATTG | 1 cut(s) | 2437 |
| MvaI | CCWGG | 1 cut(s) | 996 |
| MvnI | CGCG | 2 cut(s) | 226, 260 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 202, 722, 1542, 2413 |
| NdeI | CATATG | 2 cut(s) | 948, 1590 |
| NlaIII | CATG | 9 cut(s) | 329, 574, 642, 1049, 1124, 1377, 1985, 2200, 2566 |
| NlaIV | GGNNCC | 5 cut(s) | 17, 275, 374, 1929, 2450 |
| NmuCI | GTSAC | 1 cut(s) | 1688 |
| NruI | TCGCGA | 1 cut(s) | 226 |
| NsbI | TGCGCA | 1 cut(s) | 575 |
| NsiI | ATGCAT | 3 cut(s) | 1590, 1651, 2399 |
| NspI | RCATGY | 4 cut(s) | 574, 1124, 1377, 2566 |
| PacI | TTAATTAA | 1 cut(s) | 681 |
| PaeI | GCATGC | 2 cut(s) | 574, 1124 |
| PaeR7I | CTCGAG | 1 cut(s) | 618 |
| PagI | TCATGA | 2 cut(s) | 1045, 2196 |
| PciSI | GCTCTTC | 1 cut(s) | 1212 |
| PdmI | GAANNNNTTC | 2 cut(s) | 613, 1719 |
| PfeI | GAWTC | 9 cut(s) | 425, 614, 1097, 1698, 1848, 2005, 2020, 2059, 2676 |
| PfoI | TCCNGGA | 1 cut(s) | 994 |
| PkrI | GCNGC | 3 cut(s) | 127, 457, 2105 |
| PleI | GAGTC | 5 cut(s) | 526, 1302, 1993, 2155, 2418 |
| PmaCI | CACGTG | 2 cut(s) | 1145, 2267 |
| PmlI | CACGTG | 2 cut(s) | 1145, 2267 |
| PpsI | GAGTC | 5 cut(s) | 526, 1302, 1993, 2155, 2418 |
| Ppu21I | YACGTR | 2 cut(s) | 1145, 2267 |
| PshBI | ATTAAT | 2 cut(s) | 633, 681 |
| Psp6I | CCWGG | 1 cut(s) | 994 |
| PspCI | CACGTG | 2 cut(s) | 1145, 2267 |
| PspEI | GGTNACC | 1 cut(s) | 2333 |
| PspGI | CCWGG | 1 cut(s) | 994 |
| PspN4I | GGNNCC | 5 cut(s) | 17, 275, 374, 1929, 2450 |
| PspPI | GGNCC | 2 cut(s) | 1570, 1927 |
| PsuI | RGATCY | 3 cut(s) | 312, 475, 2359 |
| RruI | TCGCGA | 1 cut(s) | 226 |
| RsaI | GTAC | 6 cut(s) | 515, 1856, 2277, 2544, 2600, 2610 |
| RsaNI | GTAC | 6 cut(s) | 514, 1855, 2276, 2543, 2599, 2609 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1143, 2687 |
| SalI | GTCGAC | 1 cut(s) | 941 |
| SapI | GCTCTTC | 1 cut(s) | 1212 |
| SatI | GCNGC | 3 cut(s) | 126, 456, 2104 |
| Sau96I | GGNCC | 2 cut(s) | 1570, 1927 |
| SchI | GAGTC | 5 cut(s) | 527, 1302, 1994, 2156, 2418 |
| ScrFI | CCNGG | 1 cut(s) | 996 |
| SduI | GDGCHC | 1 cut(s) | 1264 |
| SfaNI | GCATC | 8 cut(s) | 889, 952, 1175, 1315, 1460, 1554, 2406, 2617 |
| SfcI | CTRYAG | 2 cut(s) | 739, 1242 |
| Sfr274I | CTCGAG | 1 cut(s) | 618 |
| SinI | GGWCC | 1 cut(s) | 1927 |
| SlaI | CTCGAG | 1 cut(s) | 618 |
| SmiI | ATTTAAAT | 1 cut(s) | 2283 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1143, 2687 |
| SmlI | CTYRAG | 5 cut(s) | 73, 367, 618, 1828, 2290 |
| SmoI | CTYRAG | 5 cut(s) | 73, 367, 618, 1828, 2290 |
| SphI | GCATGC | 2 cut(s) | 574, 1124 |
| SsiI | CCGC | 3 cut(s) | 1188, 1518, 1549 |
| SspI | AATATT | 1 cut(s) | 969 |
| SspMI | CTAG | 7 cut(s) | 6, 1020, 1418, 1539, 1914, 2162, 2579 |
| StyD4I | CCNGG | 1 cut(s) | 994 |
| StyI | CCWWGG | 2 cut(s) | 1578, 1610 |
| SwaI | ATTTAAAT | 1 cut(s) | 2283 |
| TaaI | ACNGT | 6 cut(s) | 222, 589, 1441, 1483, 1823, 1876 |
| TaiI | ACGT | 7 cut(s) | 69, 155, 354, 942, 1147, 1695, 2269 |
| TaqI | TCGA | 9 cut(s) | 52, 97, 354, 619, 942, 1129, 1696, 1953, 2422 |
| TaqII | GACCGA | 1 cut(s) | 1197 |
| TatI | WGTACW | 1 cut(s) | 2275 |
| TfiI | GAWTC | 9 cut(s) | 425, 614, 1097, 1698, 1848, 2005, 2020, 2059, 2676 |
| TscAI | CASTG | 5 cut(s) | 880, 1107, 1269, 1783, 2212 |
| TseFI | GTSAC | 1 cut(s) | 1688 |
| TseI | GCWGC | 3 cut(s) | 125, 455, 2103 |
| Tsp45I | GTSAC | 1 cut(s) | 1688 |
| TspDTI | ATGAA | 9 cut(s) | 283, 516, 627, 965, 1062, 1110, 1308, 2185, 2476 |
| TspGWI | ACGGA | 2 cut(s) | 1437, 2144 |
| TspRI | CASTG | 5 cut(s) | 880, 1107, 1269, 1783, 2212 |
| VneI | GTGCAC | 1 cut(s) | 1260 |
| VpaK11BI | GGWCC | 1 cut(s) | 1927 |
| VspI | ATTAAT | 2 cut(s) | 633, 681 |
| XapI | RAATTY | 8 cut(s) | 626, 719, 1212, 1354, 1718, 1754, 2175, 2351 |
| XceI | RCATGY | 4 cut(s) | 574, 1124, 1377, 2566 |
| XcmI | CCANNNNNNNNNTGG | 4 cut(s) | 842, 1099, 1149, 2247 |
| XhoI | CTCGAG | 1 cut(s) | 618 |
| XmiI | GTMKAC | 2 cut(s) | 670, 942 |
| XmnI | GAANNNNTTC | 2 cut(s) | 613, 1719 |
| XspI | CTAG | 7 cut(s) | 6, 1020, 1418, 1539, 1914, 2162, 2579 |
| ZraI | GACGTC | 2 cut(s) | 352, 940 |
| Zsp2I | ATGCAT | 3 cut(s) | 1590, 1651, 2399 |