FvH4_7g10510

TMV resistance protein N-like

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
Physical Location & Seq
Forward (+)
9907943 .. 9910202
2260 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g10510.t1

Sequence Viewer

Length: 1890 bp
ATGCGCAAATTAAGATTACTCGACCTTTGTAATGTACAACTGAATGGAAGTTATGAAGAGTTTCCTCAAGGACTAAGATGGTTGTGCTGGGTTGAATTCCCCTTGGACTCTGTTCCGAGTGATTTTCGTTTTGAGAGTCTTGTTGTTCTTGAAATGCCTAGTAGTAACTTGAGACAGGTGTGGAAGGGAATGAAGAACCAGCTTCCATCATTGAAGATGCTTGATCTCAGCAATTCCCTTTACCTTACTGAAGTTAGTGATTTCTCGTTAGTGCCCAATCTAGAGAAATTGATTCTTGAACATTGTCCAAGATTGGTTGAAATCCATGAGTCCATTGGAATCCTAGAGAGTCTTGTTTATATGAGTATGAAAGATTGCAAAACTATTACCAAGCTTCCTGAGAATTTTTCTGTTCTAAAATCACTGGAGACGCTTGTCATATCTGGTTGCTCAAATCTGAATGAGTTTCCAGTGCAGATGAGAAAGATGAAATCTCTGAAAGTGCTTGAAGTAGATGAAGTTCCCATAAACCAATTTCTCACTACCACAGGGGAGGTCATATCATGGCCAAGGAAAAGTATAGATAATTTTTGGGCTTCATTCCCCTCAACTCTAGTTGACTTGAGTCTTAGAAACTGCGGACTTTTTGATGATGCTTTTCCTATGAGTTTTAGTAACTTGTGTTCACTGCAGACATTGGATCTAAGCATGAATCCAATTGCTGGCTTACCGGATTGCATCAGAGGCCTCAGAGGGATTGATCTCCTTAAGTTTCAAAAGTGTACAGGTCTTAAATCTCTTGTAAGACTACCAAAAGTGAAAGTACTGGATATGTGGGATTGTGAGTCAGTGGAAAAAATAACATTTCAGTCAATATCATGCATACCAAATAAAATAGAGATATATCTGGCTACACGCTCCAAACTGTCTGAGATTGAGCACTGGTTCAAGTTGGAACCTATTGAGAAGGTTGATGTAAAATTGATCAACGTTTTAGGCTTGCACAACTTGAATCCTAGGGAACTTATTAACATGTACAATGCCTGTCTTTATCTATCAAACAAAATGCATCCCATTCAGGGAGTGTCTGAATATGGTATATTCAACACATTTCTTCTTGGAAATGAGGTTCCGGGGGAGTTCAACCGTAGAAGTAGTGGTGCCTCCTCAATGTCTTTTACTGTGCCTTTACTTCCTCCTAACCTCAGGATTCGAGGCTTCAACTTTTTCTCTGTCTATGCGGACTCCGAAGGTGTTCGTTCTGGTCTTCTACCTAATCATCCTGTAATGATAAGATTCATTAATAAGAGCAAGTCCCTGAAGTGGATCTATGGGCCGTCATTCTATGGCATTCCAAGTAAGGAGAAAAACATAATATGGTTGAGCCATTGGAAGTTGGGGAATCGATTGGAAGGTGGCGATGAAGTCTCTATTTCAGTGTATACACCCCAGCAACATTTCCAAGTTAAAGAATGGGGCATCCAAATTGTGGAAGAACAAGAAGACCAGATTATCAGTACCCCCGATAGCAGCAGCAACATAAATTCATGTTATTCAGATCAAGATGTCAATGATGTCATTGGTGGAGATTTGTTAGAGTATCAGGTGATGCCAGGAACATACTTGCTTAGCGGTGGACCTGTAGAAGAAAATAGAGAACTGTATAATAGTTGGATCGATAAGTCTGTTTGGTTGAATAACATGATTGAAGACTCTGCTGAAGAAACAGAAGAAAGGCAGCAAGAGCAGCATTATGGTGAGTCTGACATGATGCCTGCATCAGAAGTAGATGCAGGGAGGGTTTGCATCGGCTGCAAGTTTTTCATTATAGCCATTATCGAATGGTCAGTTGCTCTATTCTCTCCATGTGAAGGAAATGACAGGTCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

630

Amino Acids

71.64

Weight (kDa)

5.04

Isoelectric Point (pI)

49.45

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 94 - 173 4.9e-06 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000036)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G57630 AT1G72930 AT5G38344
fragaria_vesca FvH4_1g27020 FvH4_2g00931 FvH4_2g17330 FvH4_2g17330 FvH4_2g17340 FvH4_2g17350 FvH4_2g20690 FvH4_5g15301 FvH4_5g34194 FvH4_5g38530 FvH4_5g38740 FvH4_5g38740 FvH4_5g38740 FvH4_6g03800 FvH4_7g09791 FvH4_7g09800 FvH4_7g09800 FvH4_7g10510 FvH4_7g10520 FvH4_7g10520 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750
malus_domestica MD02G1217100.v1.1 MD02G1217200.v1.1 MD02G1217400.v1.1 MD02G1217600.v1.1 MD02G1264800.v1.1 MD02G1264900.v1.1 MD02G1302100.v1.1 MD04G1010700.v1.1 MD05G1006800.v1.1 MD05G1140100.v1.1 MD05G1140200.v1.1 MD05G1152200.v1.1 MD07G1073500.v1.1 MD07G1101700.v1.1 MD07G1102200.v1.1 MD07G1103200.v1.1 MD07G1112300.v1.1 MD08G1018200.v1.1 MD08G1018400.v1.1 MD08G1018800.v1.1 MD08G1019000.v1.1 MD08G1019100.v1.1 MD08G1019200.v1.1 MD08G1019300.v1.1 MD08G1019400.v1.1 MD08G1019600.v1.1 MD08G1019900.v1.1 MD08G1020000.v1.1 MD08G1020200.v1.1 MD08G1020500.v1.1 MD08G1020700.v1.1 MD08G1020800.v1.1 MD08G1040700.v1.1 MD11G1112400.v1.1 MD12G1068600.v1.1 MD12G1193200.v1.1 MD13G1050600.v1.1 MD15G1374900.v1.1 MD15G1375100.v1.1 MD15G1416500.v1.1 MD17G1072500.v1.1 MD17G1274200.v1.1 MD17G1274900.v1.1
prunus_persica Prupe.2G121000_v2.0.a1 Prupe.2G121000_v2.0.a1 Prupe.2G125800_v2.0.a1 Prupe.2G126000_v2.0.a1 Prupe.2G126100_v2.0.a1 Prupe.2G126200_v2.0.a1 Prupe.2G126300_v2.0.a1 Prupe.2G126400_v2.0.a1 Prupe.2G126500_v2.0.a1 Prupe.2G126600_v2.0.a1 Prupe.2G126700_v2.0.a1 Prupe.2G126700_v2.0.a1 Prupe.2G126800_v2.0.a1 Prupe.2G126900_v2.0.a1 Prupe.2G127000_v2.0.a1 Prupe.2G127000_v2.0.a1 Prupe.2G127000_v2.0.a1 Prupe.2G127000_v2.0.a1 Prupe.2G135500_v2.0.a1 Prupe.2G135600_v2.0.a1 Prupe.2G135700_v2.0.a1 Prupe.2G135700_v2.0.a1 Prupe.3G009800_v2.0.a1 Prupe.3G010200_v2.0.a1 Prupe.3G131000_v2.0.a1 Prupe.4G260800_v2.0.a1 Prupe.4G260900_v2.0.a1 Prupe.6G083100_v2.0.a1 Prupe.6G083200_v2.0.a1 Prupe.6G083400_v2.0.a1 Prupe.6G132100_v2.0.a1 Prupe.8G184900_v2.0.a1 Prupe.8G185200_v2.0.a1 Prupe.8G185300_v2.0.a1
pyrus_communis pycom02g17870 pycom02g17880 pycom02g19520 pycom02g22610 pycom02g22630 pycom02g22680 pycom05g13540 pycom05g14680 pycom07g04880 pycom07g04890 pycom07g05690 pycom07g05710 pycom07g05720 pycom07g05750 pycom07g05780 pycom07g06300 pycom07g08320 pycom07g08330 pycom07g08350 pycom07g08360 pycom07g08370 pycom07g08410 pycom07g08420 pycom07g08430 pycom07g08440 pycom07g08470 pycom07g08480 pycom07g08520 pycom07g08550 pycom07g08560 pycom07g08640 pycom07g08660 pycom07g08670 pycom07g08680 pycom07g08690 pycom07g08720 pycom07g08730 pycom07g08790 pycom07g08800 pycom07g08810 pycom07g08860 pycom07g08890 pycom07g09720 pycom08g01590 pycom08g01600 pycom08g01620 pycom08g01630 pycom08g01640 pycom10g12630 pycom15g16490 pycom17g07200 pycom17g07210 pycom17g07220 pycom17g11730 pycom17g11740 pycom17g27340 pycom17g27380
rosa_chinensis RchiOBHm_Chr1g0342571 RchiOBHm_Chr1g0346231 RchiOBHm_Chr1g0346831 RchiOBHm_Chr1g0346891 RchiOBHm_Chr1g0348311 RchiOBHm_Chr1g0348321 RchiOBHm_Chr1g0348331 RchiOBHm_Chr1g0348361 RchiOBHm_Chr1g0348371 RchiOBHm_Chr1g0348381 RchiOBHm_Chr1g0348401 RchiOBHm_Chr1g0348411 RchiOBHm_Chr1g0348421 RchiOBHm_Chr1g0348431 RchiOBHm_Chr2g0130881 RchiOBHm_Chr3g0487331 RchiOBHm_Chr5g0060371 RchiOBHm_Chr6g0246491 RchiOBHm_Chr6g0246871 RchiOBHm_Chr6g0250311 RchiOBHm_Chr6g0250781 RchiOBHm_Chr6g0251431 RchiOBHm_Chr6g0281871 RchiOBHm_Chr6g0281881 RchiOBHm_Chr6g0281931 RchiOBHm_Chr6g0281941 RchiOBHm_Chr6g0281951 RchiOBHm_Chr6g0281971 RchiOBHm_Chr6g0281981 RchiOBHm_Chr7g0240541 RchiOBHm_Chr7g0240631 RchiOBHm_Chr7g0240671
rosa_laevigata RLG00000000627 RLG00000000631 RLG00000000641 RLG00000000645 RLG00000000652 RLG00000000662 RLG00000000663 RLG00000000667 RLG00000000670 RLG00000000702 RLG00000001216 RLG00000001219 RLG00000007678 RLG00000012923 RLG00000012996 RLG00000013243 RLG00000017513 RLG00000017514 RLG00000020936 RLG00000022755 RLG00000023013 RLG00000028646 RLG00000028654 RLG00000028662 RLG00000028665 RLG00000028667 RLG00000028711 RLG00000028714 RLG00000028716 RLG00000028770 RLG00000028771 RLG00000028773 RLG00000028778 RLG00000028798 RLG00000028809 RLG00000028813 RLG00000029334 RLG00000030003 RLG00000033910 RLG00000034358 RLG00000035430
rosa_multiflora Rmu_co8031134.1_g000001 Rmu_co8092796.1_g000001 Rmu_co8130156.1_g000001 Rmu_co8325323.1_g000001 Rmu_co8424083.1_g000002 Rmu_sc0000008.1_g000003 Rmu_sc0000008.1_g000011 Rmu_sc0000008.1_g000015 Rmu_sc0000008.1_g000020 Rmu_sc0000091.1_g000015 Rmu_sc0000091.1_g000018 Rmu_sc0000091.1_g000029 Rmu_sc0000091.1_g000031 Rmu_sc0000391.1_g000004 Rmu_sc0001070.1_g000030 Rmu_sc0001293.1_g000016 Rmu_sc0001674.1_g000006 Rmu_sc0001731.1_g000002 Rmu_sc0001731.1_g000003 Rmu_sc0001731.1_g000005 Rmu_sc0001911.1_g000029 Rmu_sc0001913.1_g000038 Rmu_sc0001955.1_g000025 Rmu_sc0001992.1_g000022 Rmu_sc0001992.1_g000028 Rmu_sc0001992.1_g000031 Rmu_sc0002517.1_g000013 Rmu_sc0002517.1_g000017 Rmu_sc0002551.1_g000022 Rmu_sc0002551.1_g000029 Rmu_sc0002551.1_g000038 Rmu_sc0002705.1_g000015 Rmu_sc0002705.1_g000016 Rmu_sc0002882.1_g000055 Rmu_sc0003232.1_g000027 Rmu_sc0003363.1_g000037 Rmu_sc0003600.1_g000054 Rmu_sc0003918.1_g000011 Rmu_sc0004395.1_g000011 Rmu_sc0005071.1_g000004 Rmu_sc0005255.1_g000018 Rmu_sc0005327.1_g000004 Rmu_sc0005597.1_g000007 Rmu_sc0007060.1_g000007 Rmu_sc0007310.1_g000003 Rmu_sc0007383.1_g000014 Rmu_sc0007799.1_g000003 Rmu_sc0008477.1_g000016 Rmu_sc0010151.1_g000009 Rmu_sc0011217.1_g000005 Rmu_sc0016269.1_g000006 Rmu_sc0021495.1_g000001 Rmu_sc0027364.1_g000001 Rmu_sc0029432.1_g000001 Rmu_sc0041386.1_g000001 Rmu_ssc0000126.1_g000023 Rmu_ssc0000126.1_g000027
rosa_roxburghii Rroxscaffold_1G00006130 Rroxscaffold_1G00023320 Rroxscaffold_1G00038770 Rroxscaffold_2G00119800 Rroxscaffold_2G00121860 Rroxscaffold_3G00219780 Rroxscaffold_3G00219890 Rroxscaffold_4G00306740 Rroxscaffold_4G00306820 Rroxscaffold_4G00307000 Rroxscaffold_4G00307010 Rroxscaffold_4G00307020 Rroxscaffold_4G00308030 Rroxscaffold_4G00308070 Rroxscaffold_4G00308450 Rroxscaffold_4G00308460 Rroxscaffold_4G00315320 Rroxscaffold_5G00352470 Rroxscaffold_5G00371420 Rroxscaffold_6G00392300 Rroxscaffold_6G00394870 Rroxscaffold_6G00394890 Rroxscaffold_7G00186700 Rroxscaffold_7G00194980 Rroxscaffold_7G00216840
rosa_rugosa Rorug01G0076100 Rorug01G0128100 Rorug01G0149000.1 Rorug01G0149500.1 Rorug01G0180000 Rorug01G0180100 Rorug01G0182900 Rorug01G0184000 Rorug01G0184100 Rorug01G0184300 Rorug01G0184600 Rorug01G0184700 Rorug01G0184700 Rorug01G0184900 Rorug01G0185000 Rorug01G0185100 Rorug01G0189300 Rorug01G0194100 Rorug01G0194100 Rorug01G0194200 Rorug01G0194400 Rorug01G0194400 Rorug01G0194500 Rorug02G0090400 Rorug02G0090400 Rorug03G0233000 Rorug03G0233100 Rorug05G0178600 Rorug05G0178700 Rorug05G0579200 Rorug06G0144100 Rorug06G0144300 Rorug06G0144300 Rorug06G0179300 Rorug06G0208800 Rorug07G0323500 Rorug07G0337000
rosa_samantha Rh1AG046100 Rh1AG201400 Rh1AG201800 Rh1AG202100 Rh1AG202600 Rh1AG211500 Rh1AG211800 Rh1AG212200 Rh1AG212500 Rh1AG212600 Rh1AG214200 Rh1BG168000 Rh1BG168300 Rh1BG168500 Rh1BG177900 Rh1BG178200 Rh1BG178300 Rh1BG178800 Rh1BG178900 Rh1CG080900 Rh1CG183300 Rh1CG186300 Rh1CG186700 Rh1CG187000 Rh1CG187300 Rh1CG193400 Rh1CG195800 Rh1CG196000 Rh1CG196100 Rh1CG196400 Rh1CG196500 Rh1CG196800 Rh1CG198800 Rh1CG442600 Rh1DG086200 Rh1DG155400 Rh1DG156200 Rh1DG194000 Rh1DG194300 Rh1DG194900 Rh1DG197000 Rh1DG198800 Rh1DG199000 Rh1DG199200 Rh1DG202000 Rh1DG203900 Rh1DG207600 Rh1DG207900 Rh1DG208000 Rh1DG208500 Rh1DG208600 Rh1DG208700 Rh3CG339100 Rh5AG106500 Rh5AG264800 Rh5AG265300 Rh5CG302800 Rh5DG277900 Rh6AG257600 Rh6AG257700 Rh6BG260500 Rh6BG260700 Rh6CG259600 Rh6CG259700 Rh6DG252100 Rh7DG126900
rosa_wichuraiana Rw0G005780 Rw0G007540 Rw0G007550 Rw0G007560 Rw0G009390 Rw1G016900 Rw1G016930 Rw1G016940 Rw1G016970 Rw1G017860 Rw1G017890 Rw1G017900 Rw1G017910 Rw1G017920 Rw1G017960 Rw1G017970 Rw1G017980 Rw1G018150 Rw4G000830 Rw5G009290 Rw5G018950 Rw5G024850 Rw5G024870 Rw5G040460 Rw6G022290 Rw7G041020 Rw7G041200 Rw7G041360 Rw7G041450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 5
AccB1I GGYRCC 1 cut(s) 1160
AccB7I CCANNNNNTGG 2 cut(s) 722, 1489
AccI GTMKAC 1 cut(s) 1442
AciI CCGC 3 cut(s) 639, 1241, 1632
AclI AACGTT 1 cut(s) 990
AclWI GGATC 3 cut(s) 708, 1334, 1682
AcoI YGGCCR 1 cut(s) 566
AcsI RAATTY 3 cut(s) 95, 403, 1543
AcuI CTGAAG 3 cut(s) 270, 1340, 1740
AfaI GTAC 5 cut(s) 36, 784, 825, 1037, 1519
AfiI CCNNNNNNNGG 5 cut(s) 722, 1079, 1323, 1489, 1871
AflII CTTAAG 1 cut(s) 767
AflIII ACRYGT 1 cut(s) 1032
AjnI CCWGG 1 cut(s) 1612
AloI GAACNNNNNNTCC 2 cut(s) 1113, 1145
AluBI AGCT 2 cut(s) 202, 394
AluI AGCT 2 cut(s) 202, 394
Alw21I GWGCWC 1 cut(s) 942
Alw26I GTCTC 3 cut(s) 166, 422, 1432
AlwI GGATC 3 cut(s) 708, 1334, 1682
AoxI GGCC 3 cut(s) 566, 745, 1334
ApeKI GCWGC 5 cut(s) 1530, 1533, 1738, 1747, 1812
ApoI RAATTY 3 cut(s) 95, 403, 1543
AseI ATTAAT 1 cut(s) 1302
Asp700I GAANNNNTTC 2 cut(s) 60, 1254
AspA2I CCTAGG 1 cut(s) 1016
AspLEI GCGC 1 cut(s) 6
AspS9I GGNCC 2 cut(s) 1334, 1637
AsuC2I CCSGG 1 cut(s) 1134
AsuHPI GGTGA 2 cut(s) 1618, 1769
AvaII GGWCC 1 cut(s) 1637
AvrII CCTAGG 1 cut(s) 1016
AxyI CCTNAGG 1 cut(s) 1205
BaeGI GKGCMC 1 cut(s) 276
BalI TGGCCA 1 cut(s) 568
BanI GGYRCC 1 cut(s) 1160
BbsI GAAGAC 3 cut(s) 1259, 1509, 1716
Bbv12I GWGCWC 1 cut(s) 942
BbvI GCAGC 5 cut(s) 1542, 1545, 1750, 1759, 1799
BccI CCATC 2 cut(s) 72, 214
BceAI ACGGC 1 cut(s) 1321
BciT130I CCWGG 1 cut(s) 1614
BclI TGATCA 1 cut(s) 984
BcnI CCSGG 1 cut(s) 1134
BcoDI GTCTC 3 cut(s) 166, 422, 1432
BfaI CTAG 5 cut(s) 159, 281, 344, 614, 1017
BfmI CTRYAG 2 cut(s) 689, 1641
BfrI CTTAAG 1 cut(s) 767
BisI GCNGC 5 cut(s) 1531, 1534, 1739, 1748, 1813
BlnI CCTAGG 1 cut(s) 1016
BlpI GCTNAGC 1 cut(s) 1628
BlsI GCNGC 5 cut(s) 1532, 1535, 1740, 1749, 1814
BmcAI AGTACT 1 cut(s) 825
Bme1390I CCNGG 2 cut(s) 1134, 1614
Bme18I GGWCC 1 cut(s) 1637
BmgT120I GGNCC 2 cut(s) 1334, 1637
BmiI GGNNCC 3 cut(s) 957, 1131, 1162
BmrFI CCNGG 2 cut(s) 1134, 1614
BoxI GACNNNNGTC 2 cut(s) 434, 624
BpiI GAAGAC 3 cut(s) 1259, 1509, 1716
BpmI CTGGAG 1 cut(s) 446
Bpu1102I GCTNAGC 1 cut(s) 1628
BpuEI CTTGAG 3 cut(s) 51, 190, 643
BpuMI CCSGG 1 cut(s) 1134
Bsa29I ATCGAT 2 cut(s) 1405, 1677
BsaJI CCNNGG 4 cut(s) 102, 569, 1016, 1133
BsaWI WCCGGW 1 cut(s) 730
Bsc4I CCNNNNNNNGG 5 cut(s) 722, 1079, 1323, 1489, 1871
Bse1I ACTGG 4 cut(s) 429, 470, 831, 947
Bse21I CCTNAGG 1 cut(s) 1205
BseBI CCWGG 1 cut(s) 1614
BseCI ATCGAT 2 cut(s) 1405, 1677
BseDI CCNNGG 4 cut(s) 102, 569, 1016, 1133
BseGI GGATG 3 cut(s) 1069, 1279, 1479
BseLI CCNNNNNNNGG 5 cut(s) 722, 1079, 1323, 1489, 1871
BseMII CTCAG 5 cut(s) 241, 390, 763, 921, 1219
BseNI ACTGG 4 cut(s) 429, 470, 831, 947
BseRI GAGGAG 1 cut(s) 1156
BseSI GKGCMC 1 cut(s) 276
BseXI GCAGC 5 cut(s) 1542, 1545, 1750, 1759, 1799
BseYI CCCAGC 2 cut(s) 87, 1449
BsgI GTGCAG 1 cut(s) 494
BshFI GGCC 3 cut(s) 568, 747, 1336
BshNI GGYRCC 1 cut(s) 1160
BshVI ATCGAT 2 cut(s) 1405, 1677
BsiHKAI GWGCWC 1 cut(s) 942
BsiSI CCGG 2 cut(s) 731, 1133
BslFI GGGAC 1 cut(s) 1300
BslI CCNNNNNNNGG 5 cut(s) 722, 1079, 1323, 1489, 1871
BsmAI GTCTC 3 cut(s) 166, 422, 1432
BsmBI CGTCTC 1 cut(s) 422
BsmFI GGGAC 1 cut(s) 1300
BsmI GAATGC 1 cut(s) 1350
BsnI GGCC 3 cut(s) 568, 747, 1336
Bsp1286I GDGCHC 2 cut(s) 276, 942
Bsp1407I TGTACA 3 cut(s) 34, 782, 1035
Bsp143I GATC 7 cut(s) 223, 700, 760, 984, 1326, 1558, 1674
Bsp1720I GCTNAGC 1 cut(s) 1628
BspACI CCGC 3 cut(s) 639, 1241, 1632
BspANI GGCC 3 cut(s) 568, 747, 1336
BspCNI CTCAG 5 cut(s) 240, 391, 762, 922, 1218
BspDI ATCGAT 2 cut(s) 1405, 1677
BspLI GGNNCC 3 cut(s) 957, 1131, 1162
BspMAI CTGCAG 1 cut(s) 693
BspPI GGATC 3 cut(s) 708, 1334, 1682
BspT107I GGYRCC 1 cut(s) 1160
BspTI CTTAAG 1 cut(s) 767
BsrGI TGTACA 3 cut(s) 34, 782, 1035
BsrI ACTGG 4 cut(s) 429, 470, 831, 947
BssECI CCNNGG 4 cut(s) 102, 569, 1016, 1133
BssMI GATC 7 cut(s) 223, 700, 760, 984, 1326, 1558, 1674
BssNAI GTATAC 1 cut(s) 1443
BssT1I CCWWGG 3 cut(s) 102, 569, 1016
Bst1107I GTATAC 1 cut(s) 1443
Bst2UI CCWGG 1 cut(s) 1614
Bst4CI ACNGT 4 cut(s) 927, 1148, 1183, 1662
Bst6I CTCTTC 1 cut(s) 51
BstAFI CTTAAG 1 cut(s) 767
BstAPI GCANNNNNTGC 1 cut(s) 1812
BstAUI TGTACA 3 cut(s) 34, 782, 1035
BstC8I GCNNGC 3 cut(s) 724, 1001, 1776
BstDEI CTNAG 9 cut(s) 74, 227, 399, 629, 704, 749, 930, 1205, 1628
BstF5I GGATG 3 cut(s) 1069, 1279, 1479
BstHHI GCGC 1 cut(s) 6
BstKTI GATC 7 cut(s) 226, 703, 763, 987, 1329, 1561, 1677
BstMAI GTCTC 3 cut(s) 166, 422, 1432
BstMBI GATC 7 cut(s) 223, 700, 760, 984, 1326, 1558, 1674
BstMWI GCNNNNNNNGC 4 cut(s) 744, 1744, 1747, 1812
BstNI CCWGG 1 cut(s) 1614
BstNSI RCATGY 1 cut(s) 1036
BstPAI GACNNNNGTC 2 cut(s) 434, 624
BstSCI CCNGG 2 cut(s) 1132, 1612
BstSFI CTRYAG 2 cut(s) 689, 1641
BstSLI GKGCMC 1 cut(s) 276
BstV1I GCAGC 5 cut(s) 1542, 1545, 1750, 1759, 1799
BstV2I GAAGAC 3 cut(s) 1259, 1509, 1716
BstX2I RGATCY 2 cut(s) 700, 1326
BstYI RGATCY 2 cut(s) 700, 1326
BstZ17I GTATAC 1 cut(s) 1443
Bsu15I ATCGAT 2 cut(s) 1405, 1677
Bsu36I CCTNAGG 1 cut(s) 1205
BsuRI GGCC 3 cut(s) 568, 747, 1336
BsuTUI ATCGAT 2 cut(s) 1405, 1677
BtgZI GCGATG 1 cut(s) 1434
BtsCI GGATG 3 cut(s) 1069, 1279, 1479
BtsI GCAGTG 1 cut(s) 686
BtsIMutI CAGTG 6 cut(s) 422, 477, 686, 855, 940, 1443
Cac8I GCNNGC 3 cut(s) 724, 1001, 1776
CfoI GCGC 1 cut(s) 6
Cfr13I GGNCC 2 cut(s) 1334, 1637
ClaI ATCGAT 2 cut(s) 1405, 1677
CseI GACGC 1 cut(s) 439
Csp6I GTAC 5 cut(s) 35, 783, 824, 1036, 1518
CviAII CATG 9 cut(s) 326, 564, 709, 879, 1033, 1548, 1702, 1768, 1866
CviQI GTAC 5 cut(s) 35, 783, 824, 1036, 1518
DdeI CTNAG 9 cut(s) 74, 227, 399, 629, 704, 749, 930, 1205, 1628
DpnI GATC 7 cut(s) 225, 702, 762, 986, 1328, 1560, 1676
DpnII GATC 7 cut(s) 223, 700, 760, 984, 1326, 1558, 1674
EaeI YGGCCR 1 cut(s) 566
Eam1104I CTCTTC 1 cut(s) 51
EarI CTCTTC 1 cut(s) 51
Eco130I CCWWGG 3 cut(s) 102, 569, 1016
Eco147I AGGCCT 1 cut(s) 747
Eco47I GGWCC 1 cut(s) 1637
Eco57I CTGAAG 3 cut(s) 270, 1340, 1740
Eco81I CCTNAGG 1 cut(s) 1205
EcoRI GAATTC 1 cut(s) 95
EcoRII CCWGG 1 cut(s) 1612
EcoT14I CCWWGG 3 cut(s) 102, 569, 1016
EcoT22I ATGCAT 2 cut(s) 884, 1071
ErhI CCWWGG 3 cut(s) 102, 569, 1016
Esp3I CGTCTC 1 cut(s) 422
FaeI CATG 9 cut(s) 329, 567, 712, 882, 1036, 1551, 1705, 1771, 1869
FaqI GGGAC 1 cut(s) 1300
FatI CATG 9 cut(s) 325, 563, 708, 878, 1032, 1547, 1701, 1767, 1865
FbaI TGATCA 1 cut(s) 984
FblI GTMKAC 1 cut(s) 1442
Fnu4HI GCNGC 5 cut(s) 1531, 1534, 1739, 1748, 1813
FokI GGATG 3 cut(s) 1056, 1266, 1466
Fsp4HI GCNGC 5 cut(s) 1531, 1534, 1739, 1748, 1813
FspBI CTAG 5 cut(s) 159, 281, 344, 614, 1017
FspI TGCGCA 1 cut(s) 5
GlaI GCGC 1 cut(s) 5
GluI GCNGC 5 cut(s) 1531, 1534, 1739, 1748, 1813
GsaI CCCAGC 2 cut(s) 91, 1453
GsuI CTGGAG 1 cut(s) 446
HaeIII GGCC 3 cut(s) 568, 747, 1336
HapII CCGG 2 cut(s) 731, 1133
HgaI GACGC 1 cut(s) 439
HhaI GCGC 1 cut(s) 6
Hin1II CATG 9 cut(s) 329, 567, 712, 882, 1036, 1551, 1705, 1771, 1869
Hin6I GCGC 1 cut(s) 4
HinP1I GCGC 1 cut(s) 4
HincII GTYRAC 1 cut(s) 619
HindII GTYRAC 1 cut(s) 619
HindIII AAGCTT 1 cut(s) 392
HpaII CCGG 2 cut(s) 731, 1133
HphI GGTGA 2 cut(s) 1618, 1769
Hpy166II GTNNAC 5 cut(s) 619, 686, 783, 1443, 1637
Hpy188III TCNNGA 7 cut(s) 149, 281, 296, 398, 1207, 1562, 1887
Hpy8I GTNNAC 5 cut(s) 619, 686, 783, 1443, 1637
HpyAV CCTTC 5 cut(s) 178, 961, 1244, 1406, 1865
HpyCH4III ACNGT 4 cut(s) 927, 1148, 1183, 1662
HpyCH4IV ACGT 1 cut(s) 990
HpyF10VI GCNNNNNNNGC 4 cut(s) 744, 1744, 1747, 1812
HpyF3I CTNAG 9 cut(s) 74, 227, 399, 629, 704, 749, 930, 1205, 1628
HpySE526I ACGT 1 cut(s) 990
Hsp92II CATG 9 cut(s) 329, 567, 712, 882, 1036, 1551, 1705, 1771, 1869
HspAI GCGC 1 cut(s) 4
Ksp22I TGATCA 1 cut(s) 984
Kzo9I GATC 7 cut(s) 223, 700, 760, 984, 1326, 1558, 1674
LmnI GCTCC 1 cut(s) 923
Lsp1109I GCAGC 5 cut(s) 1542, 1545, 1750, 1759, 1799
MaeI CTAG 5 cut(s) 159, 281, 344, 614, 1017
MaeII ACGT 1 cut(s) 990
MaeIII GTNAC 2 cut(s) 164, 674
MalI GATC 7 cut(s) 225, 702, 762, 986, 1328, 1560, 1676
MboI GATC 7 cut(s) 223, 700, 760, 984, 1326, 1558, 1674
MfeI CAATTG 1 cut(s) 717
MflI RGATCY 2 cut(s) 700, 1326
MhlI GDGCHC 2 cut(s) 276, 942
MlsI TGGCCA 1 cut(s) 568
MluNI TGGCCA 1 cut(s) 568
MlyI GAGTC 9 cut(s) 101, 145, 338, 358, 634, 854, 1238, 1706, 1769
MmeI TCCRAC 2 cut(s) 933, 1652
Mox20I TGGCCA 1 cut(s) 568
Mph1103I ATGCAT 2 cut(s) 884, 1071
MroXI GAANNNNTTC 2 cut(s) 60, 1254
MscI TGGCCA 1 cut(s) 568
MseI TTAA 6 cut(s) 11, 768, 792, 1029, 1302, 1467
MslI CAYNNNNRTG 1 cut(s) 1755
Msp20I TGGCCA 1 cut(s) 568
MspCI CTTAAG 1 cut(s) 767
MspI CCGG 2 cut(s) 731, 1133
MspR9I CCNGG 2 cut(s) 1134, 1614
MunI CAATTG 1 cut(s) 717
Mva1269I GAATGC 1 cut(s) 1350
MvaI CCWGG 1 cut(s) 1614
MwoI GCNNNNNNNGC 4 cut(s) 744, 1744, 1747, 1812
NciI CCSGG 1 cut(s) 1134
NdeII GATC 7 cut(s) 223, 700, 760, 984, 1326, 1558, 1674
NlaIII CATG 9 cut(s) 329, 567, 712, 882, 1036, 1551, 1705, 1771, 1869
NlaIV GGNNCC 3 cut(s) 957, 1131, 1162
NsbI TGCGCA 1 cut(s) 5
NsiI ATGCAT 2 cut(s) 884, 1071
NspI RCATGY 1 cut(s) 1036
PceI AGGCCT 1 cut(s) 747
PciI ACATGT 1 cut(s) 1032
PctI GAATGC 1 cut(s) 1350
PdmI GAANNNNTTC 2 cut(s) 60, 1254
PfeI GAWTC 7 cut(s) 292, 339, 712, 1012, 1210, 1296, 1402
PflMI CCANNNNNTGG 2 cut(s) 722, 1489
PkrI GCNGC 5 cut(s) 1532, 1535, 1740, 1749, 1814
PleI GAGTC 9 cut(s) 101, 144, 337, 357, 633, 853, 1238, 1706, 1768
PpsI GAGTC 9 cut(s) 101, 144, 337, 357, 633, 853, 1238, 1706, 1768
PscI ACATGT 1 cut(s) 1032
PshAI GACNNNNGTC 2 cut(s) 434, 624
PshBI ATTAAT 1 cut(s) 1302
Psp1406I AACGTT 1 cut(s) 990
Psp6I CCWGG 1 cut(s) 1612
PspFI CCCAGC 2 cut(s) 87, 1449
PspGI CCWGG 1 cut(s) 1612
PspN4I GGNNCC 3 cut(s) 957, 1131, 1162
PspPI GGNCC 2 cut(s) 1334, 1637
PsrI GAACNNNNNNTAC 4 cut(s) 504, 536, 667, 699
PstI CTGCAG 1 cut(s) 693
PsuI RGATCY 2 cut(s) 700, 1326
RsaI GTAC 5 cut(s) 36, 784, 825, 1037, 1519
RsaNI GTAC 5 cut(s) 35, 783, 824, 1036, 1518
RseI CAYNNNNRTG 1 cut(s) 1755
SaqAI TTAA 6 cut(s) 11, 768, 792, 1029, 1302, 1467
SatI GCNGC 5 cut(s) 1531, 1534, 1739, 1748, 1813
Sau3AI GATC 7 cut(s) 223, 700, 760, 984, 1326, 1558, 1674
Sau96I GGNCC 2 cut(s) 1334, 1637
ScaI AGTACT 1 cut(s) 825
SchI GAGTC 9 cut(s) 101, 145, 338, 358, 634, 854, 1238, 1706, 1769
ScrFI CCNGG 2 cut(s) 1134, 1614
SduI GDGCHC 2 cut(s) 276, 942
SfcI CTRYAG 2 cut(s) 689, 1641
SinI GGWCC 1 cut(s) 1637
SmiMI CAYNNNNRTG 1 cut(s) 1755
SmlI CTYRAG 4 cut(s) 66, 169, 622, 767
SmoI CTYRAG 4 cut(s) 66, 169, 622, 767
SseBI AGGCCT 1 cut(s) 747
SsiI CCGC 3 cut(s) 639, 1241, 1632
SspMI CTAG 5 cut(s) 159, 281, 344, 614, 1017
StuI AGGCCT 1 cut(s) 747
StyD4I CCNGG 2 cut(s) 1132, 1612
StyI CCWWGG 3 cut(s) 102, 569, 1016
TaaI ACNGT 4 cut(s) 927, 1148, 1183, 1662
TaiI ACGT 1 cut(s) 993
TaqI TCGA 5 cut(s) 21, 1213, 1405, 1677, 1839
TatI WGTACW 4 cut(s) 34, 782, 823, 1035
TfiI GAWTC 7 cut(s) 292, 339, 712, 1012, 1210, 1296, 1402
Tru1I TTAA 6 cut(s) 11, 768, 792, 1029, 1302, 1467
Tru9I TTAA 6 cut(s) 11, 768, 792, 1029, 1302, 1467
TscAI CASTG 6 cut(s) 429, 477, 693, 855, 947, 1443
TseI GCWGC 5 cut(s) 1530, 1533, 1738, 1747, 1812
TspRI CASTG 6 cut(s) 429, 477, 693, 855, 947, 1443
Van91I CCANNNNNTGG 2 cut(s) 722, 1489
Vha464I CTTAAG 1 cut(s) 767
VpaK11BI GGWCC 1 cut(s) 1637
VspI ATTAAT 1 cut(s) 1302
XapI RAATTY 3 cut(s) 95, 403, 1543
XbaI TCTAGA 1 cut(s) 280
XceI RCATGY 1 cut(s) 1036
XcmI CCANNNNNNNNNTGG 1 cut(s) 332
XmaJI CCTAGG 1 cut(s) 1016
XmiI GTMKAC 1 cut(s) 1442
XmnI GAANNNNTTC 2 cut(s) 60, 1254
XspI CTAG 5 cut(s) 159, 281, 344, 614, 1017
ZrmI AGTACT 1 cut(s) 825
Zsp2I ATGCAT 2 cut(s) 884, 1071
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.