Rorug05G0178600

TMV resistance protein N-like

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Forward (+)
16823091 .. 16826975
3885 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0178600.1

Sequence Viewer

Length: 2013 bp
ATGGTTTCAAATGAGTATGAAGACTACCTCACTTACGCTGCTCTAGAGGATCAAACTAATGAACCAGAATGGATCCTAAGATTTCAGGGGAGACTTTATGATAATGATGACCAAGTCGGTATTGTAGAAGCAGACATGTGTGATTGGTATAACACTGATGGAGGGTGCAGAAGAAGGGACCGGACACCAGACTGTACATCAGGGTTTGAGTTTAGAAATAATTTTGAGCAAAAAAATGGTTCCTTCAAACCAAGTACCTCCTCGTCTAGTTCAAGATGCCCGTACTGGCTTAATTTTGCTTCAGATAAAAATTACAGCAGTAGTAGTACTGATTGTCAGGCTACATGTTGGCAAGATTGTGATTGCATTGGATATGACTTTCTATTTGATAATATGACTGGATGCCGATTTTGGAGTGTAGATTGTCACTTCTCTGAAGACCTTACTGGTTCGGCTACTACAACTGGTTTTGTAGTTATGACAAGACCAACAATGATAGAAACATCATCATCTCGCAAAAAGGGTAAGAACAGGACGAAGATTTATCAGAAAGAACTACTTAGCTTCATGAGATCTAATAGACCAACTGATGTGGATGGACTTCAAATTGACGGAAAGATAGGGCAGGATTTAAGTGTATTTAGCTATGCGTCTGTATTAGCTGCCACATGCAACTTCTCCGAAGAAAACACACTGGGACAAGGGGGCTTTGGACCGGTTTACAAGGGAAAACTGGTGACTGGGAGAAGAAATAGCTGTGAAGAAGCTTTCAAAATCTTCAGGGCAAGGCATTCAACAAGAGGCATGTTACTTGACTGGAAGAAGCGTTTTAATATAATTGAAGGAGTTGCTCAAGGATTAATTTACTTGCACAAATACTCAAGATTGAGGGTGATTCATAGAGATTTTAAAGCTAGTAATGTCCTACTTGATGACAATACGAATCCTAAAATTTCCGACTTTGGTCTGGCAAAAATCTTCACGAATAATGAAATGGAAGCAAATTGTAGTAGGATTGTGGGAACCCATGGGAGGAAAAGCAATAGCTTCTACAATGATGATCATGTGCACAATATAGTAGGATATCATACCCATCTCTCTTTGTCTCAAATCTCTGATTCATCATGGTTAAGATGCACATCCTCCTCACCTATCGGACTCCACTTCACCGATTGCTCCTTGGTCCATCGGAGCTCTGTCGTCGGCGTTGTTTGGATTGTCTGTTTTAACGGGTTTTTCCCGTCCCTGCGCGTGAACCCGTTGAATACGGTAGTGCAACAAGGGTCTGCACGGTCTTCGGCCGTCTGTCCCTTTGATCCCTCTGCGGATCAGTCTCCTTCTCCTTATCTTTTTTTCTTTTTTTCTTCTGCTTTGGTTACTGACTTTGTTTCTGAGGATGTTTTGTATGGTTTAGAGATTTGGGTTATGGAGATCTTTCTATGGGTTCTATGCTGCTGTACTTGCACGGGATTGTTTTGGTTGGACTCCAAGTCTTCGTCGGCAGATCTGGTGACGTTTCTGTGTCACCTTTGGGCTTGGCTGGTGGCGGCGACGTCACTACGCCATCTCTCTCCTGTTAGATCTGCACTGCGGCTAAATATTGCATGGAGATTATGGAACGAAGGTACATGGCTAGAACTAATGGATCCAACATTAGGCGATTCATGTAATAGGGATCAATTTCTAAGATGTGTCCATGTTGGTCTACTATGCGTTGAGGAAAATGGAGAGGATCGGCCGACCATGTTAGAAGTGATACAGGCATTGACGAACGAAACCATGGCACCACCAGCACGTACAAAGCCAGCATTTTGTATAGAAAGAACAGCGGTCATGACCAGTGGTATGGGAGGTGGTACAGGACAAGAAATCGAATCCCTGAATGGTTTGTCCATTTCAGAATTCACTGGACCTTCTGAAATTATTGTGGTCAGCCAGGTCAGGCTAATGGCTACGGTGGGTATAGCAGTGCTCAGGTACGGCAAGTCCAGCAGCAGTAATTTTGATGGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

670

Amino Acids

75.14

Weight (kDa)

5.61

Isoelectric Point (pI)

46.17

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 268 - 342 1.3e-13 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 271 - 332 2.2e-10 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000036)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G57630 AT1G72930 AT5G38344
fragaria_vesca FvH4_1g27020 FvH4_2g00931 FvH4_2g17330 FvH4_2g17330 FvH4_2g17340 FvH4_2g17350 FvH4_2g20690 FvH4_5g15301 FvH4_5g34194 FvH4_5g38530 FvH4_5g38740 FvH4_5g38740 FvH4_5g38740 FvH4_6g03800 FvH4_7g09791 FvH4_7g09800 FvH4_7g09800 FvH4_7g10510 FvH4_7g10520 FvH4_7g10520 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750
malus_domestica MD02G1217100.v1.1 MD02G1217200.v1.1 MD02G1217400.v1.1 MD02G1217600.v1.1 MD02G1264800.v1.1 MD02G1264900.v1.1 MD02G1302100.v1.1 MD04G1010700.v1.1 MD05G1006800.v1.1 MD05G1140100.v1.1 MD05G1140200.v1.1 MD05G1152200.v1.1 MD07G1073500.v1.1 MD07G1101700.v1.1 MD07G1102200.v1.1 MD07G1103200.v1.1 MD07G1112300.v1.1 MD08G1018200.v1.1 MD08G1018400.v1.1 MD08G1018800.v1.1 MD08G1019000.v1.1 MD08G1019100.v1.1 MD08G1019200.v1.1 MD08G1019300.v1.1 MD08G1019400.v1.1 MD08G1019600.v1.1 MD08G1019900.v1.1 MD08G1020000.v1.1 MD08G1020200.v1.1 MD08G1020500.v1.1 MD08G1020700.v1.1 MD08G1020800.v1.1 MD08G1040700.v1.1 MD11G1112400.v1.1 MD12G1068600.v1.1 MD12G1193200.v1.1 MD13G1050600.v1.1 MD15G1374900.v1.1 MD15G1375100.v1.1 MD15G1416500.v1.1 MD17G1072500.v1.1 MD17G1274200.v1.1 MD17G1274900.v1.1
prunus_persica Prupe.2G121000_v2.0.a1 Prupe.2G121000_v2.0.a1 Prupe.2G125800_v2.0.a1 Prupe.2G126000_v2.0.a1 Prupe.2G126100_v2.0.a1 Prupe.2G126200_v2.0.a1 Prupe.2G126300_v2.0.a1 Prupe.2G126400_v2.0.a1 Prupe.2G126500_v2.0.a1 Prupe.2G126600_v2.0.a1 Prupe.2G126700_v2.0.a1 Prupe.2G126700_v2.0.a1 Prupe.2G126800_v2.0.a1 Prupe.2G126900_v2.0.a1 Prupe.2G127000_v2.0.a1 Prupe.2G127000_v2.0.a1 Prupe.2G127000_v2.0.a1 Prupe.2G127000_v2.0.a1 Prupe.2G135500_v2.0.a1 Prupe.2G135600_v2.0.a1 Prupe.2G135700_v2.0.a1 Prupe.2G135700_v2.0.a1 Prupe.3G009800_v2.0.a1 Prupe.3G010200_v2.0.a1 Prupe.3G131000_v2.0.a1 Prupe.4G260800_v2.0.a1 Prupe.4G260900_v2.0.a1 Prupe.6G083100_v2.0.a1 Prupe.6G083200_v2.0.a1 Prupe.6G083400_v2.0.a1 Prupe.6G132100_v2.0.a1 Prupe.8G184900_v2.0.a1 Prupe.8G185200_v2.0.a1 Prupe.8G185300_v2.0.a1
pyrus_communis pycom02g17870 pycom02g17880 pycom02g19520 pycom02g22610 pycom02g22630 pycom02g22680 pycom05g13540 pycom05g14680 pycom07g04880 pycom07g04890 pycom07g05690 pycom07g05710 pycom07g05720 pycom07g05750 pycom07g05780 pycom07g06300 pycom07g08320 pycom07g08330 pycom07g08350 pycom07g08360 pycom07g08370 pycom07g08410 pycom07g08420 pycom07g08430 pycom07g08440 pycom07g08470 pycom07g08480 pycom07g08520 pycom07g08550 pycom07g08560 pycom07g08640 pycom07g08660 pycom07g08670 pycom07g08680 pycom07g08690 pycom07g08720 pycom07g08730 pycom07g08790 pycom07g08800 pycom07g08810 pycom07g08860 pycom07g08890 pycom07g09720 pycom08g01590 pycom08g01600 pycom08g01620 pycom08g01630 pycom08g01640 pycom10g12630 pycom15g16490 pycom17g07200 pycom17g07210 pycom17g07220 pycom17g11730 pycom17g11740 pycom17g27340 pycom17g27380
rosa_chinensis RchiOBHm_Chr1g0342571 RchiOBHm_Chr1g0346231 RchiOBHm_Chr1g0346831 RchiOBHm_Chr1g0346891 RchiOBHm_Chr1g0348311 RchiOBHm_Chr1g0348321 RchiOBHm_Chr1g0348331 RchiOBHm_Chr1g0348361 RchiOBHm_Chr1g0348371 RchiOBHm_Chr1g0348381 RchiOBHm_Chr1g0348401 RchiOBHm_Chr1g0348411 RchiOBHm_Chr1g0348421 RchiOBHm_Chr1g0348431 RchiOBHm_Chr2g0130881 RchiOBHm_Chr3g0487331 RchiOBHm_Chr5g0060371 RchiOBHm_Chr6g0246491 RchiOBHm_Chr6g0246871 RchiOBHm_Chr6g0250311 RchiOBHm_Chr6g0250781 RchiOBHm_Chr6g0251431 RchiOBHm_Chr6g0281871 RchiOBHm_Chr6g0281881 RchiOBHm_Chr6g0281931 RchiOBHm_Chr6g0281941 RchiOBHm_Chr6g0281951 RchiOBHm_Chr6g0281971 RchiOBHm_Chr6g0281981 RchiOBHm_Chr7g0240541 RchiOBHm_Chr7g0240631 RchiOBHm_Chr7g0240671
rosa_laevigata RLG00000000627 RLG00000000631 RLG00000000641 RLG00000000645 RLG00000000652 RLG00000000662 RLG00000000663 RLG00000000667 RLG00000000670 RLG00000000702 RLG00000001216 RLG00000001219 RLG00000007678 RLG00000012923 RLG00000012996 RLG00000013243 RLG00000017513 RLG00000017514 RLG00000020936 RLG00000022755 RLG00000023013 RLG00000028646 RLG00000028654 RLG00000028662 RLG00000028665 RLG00000028667 RLG00000028711 RLG00000028714 RLG00000028716 RLG00000028770 RLG00000028771 RLG00000028773 RLG00000028778 RLG00000028798 RLG00000028809 RLG00000028813 RLG00000029334 RLG00000030003 RLG00000033910 RLG00000034358 RLG00000035430
rosa_multiflora Rmu_co8031134.1_g000001 Rmu_co8092796.1_g000001 Rmu_co8130156.1_g000001 Rmu_co8325323.1_g000001 Rmu_co8424083.1_g000002 Rmu_sc0000008.1_g000003 Rmu_sc0000008.1_g000011 Rmu_sc0000008.1_g000015 Rmu_sc0000008.1_g000020 Rmu_sc0000091.1_g000015 Rmu_sc0000091.1_g000018 Rmu_sc0000091.1_g000029 Rmu_sc0000091.1_g000031 Rmu_sc0000391.1_g000004 Rmu_sc0001070.1_g000030 Rmu_sc0001293.1_g000016 Rmu_sc0001674.1_g000006 Rmu_sc0001731.1_g000002 Rmu_sc0001731.1_g000003 Rmu_sc0001731.1_g000005 Rmu_sc0001911.1_g000029 Rmu_sc0001913.1_g000038 Rmu_sc0001955.1_g000025 Rmu_sc0001992.1_g000022 Rmu_sc0001992.1_g000028 Rmu_sc0001992.1_g000031 Rmu_sc0002517.1_g000013 Rmu_sc0002517.1_g000017 Rmu_sc0002551.1_g000022 Rmu_sc0002551.1_g000029 Rmu_sc0002551.1_g000038 Rmu_sc0002705.1_g000015 Rmu_sc0002705.1_g000016 Rmu_sc0002882.1_g000055 Rmu_sc0003232.1_g000027 Rmu_sc0003363.1_g000037 Rmu_sc0003600.1_g000054 Rmu_sc0003918.1_g000011 Rmu_sc0004395.1_g000011 Rmu_sc0005071.1_g000004 Rmu_sc0005255.1_g000018 Rmu_sc0005327.1_g000004 Rmu_sc0005597.1_g000007 Rmu_sc0007060.1_g000007 Rmu_sc0007310.1_g000003 Rmu_sc0007383.1_g000014 Rmu_sc0007799.1_g000003 Rmu_sc0008477.1_g000016 Rmu_sc0010151.1_g000009 Rmu_sc0011217.1_g000005 Rmu_sc0016269.1_g000006 Rmu_sc0021495.1_g000001 Rmu_sc0027364.1_g000001 Rmu_sc0029432.1_g000001 Rmu_sc0041386.1_g000001 Rmu_ssc0000126.1_g000023 Rmu_ssc0000126.1_g000027
rosa_roxburghii Rroxscaffold_1G00006130 Rroxscaffold_1G00023320 Rroxscaffold_1G00038770 Rroxscaffold_2G00119800 Rroxscaffold_2G00121860 Rroxscaffold_3G00219780 Rroxscaffold_3G00219890 Rroxscaffold_4G00306740 Rroxscaffold_4G00306820 Rroxscaffold_4G00307000 Rroxscaffold_4G00307010 Rroxscaffold_4G00307020 Rroxscaffold_4G00308030 Rroxscaffold_4G00308070 Rroxscaffold_4G00308450 Rroxscaffold_4G00308460 Rroxscaffold_4G00315320 Rroxscaffold_5G00352470 Rroxscaffold_5G00371420 Rroxscaffold_6G00392300 Rroxscaffold_6G00394870 Rroxscaffold_6G00394890 Rroxscaffold_7G00186700 Rroxscaffold_7G00194980 Rroxscaffold_7G00216840
rosa_rugosa Rorug01G0076100 Rorug01G0128100 Rorug01G0149000.1 Rorug01G0149500.1 Rorug01G0180000 Rorug01G0180100 Rorug01G0182900 Rorug01G0184000 Rorug01G0184100 Rorug01G0184300 Rorug01G0184600 Rorug01G0184700 Rorug01G0184700 Rorug01G0184900 Rorug01G0185000 Rorug01G0185100 Rorug01G0189300 Rorug01G0194100 Rorug01G0194100 Rorug01G0194200 Rorug01G0194400 Rorug01G0194400 Rorug01G0194500 Rorug02G0090400 Rorug02G0090400 Rorug03G0233000 Rorug03G0233100 Rorug05G0178600 Rorug05G0178700 Rorug05G0579200 Rorug06G0144100 Rorug06G0144300 Rorug06G0144300 Rorug06G0179300 Rorug06G0208800 Rorug07G0323500 Rorug07G0337000
rosa_samantha Rh1AG046100 Rh1AG201400 Rh1AG201800 Rh1AG202100 Rh1AG202600 Rh1AG211500 Rh1AG211800 Rh1AG212200 Rh1AG212500 Rh1AG212600 Rh1AG214200 Rh1BG168000 Rh1BG168300 Rh1BG168500 Rh1BG177900 Rh1BG178200 Rh1BG178300 Rh1BG178800 Rh1BG178900 Rh1CG080900 Rh1CG183300 Rh1CG186300 Rh1CG186700 Rh1CG187000 Rh1CG187300 Rh1CG193400 Rh1CG195800 Rh1CG196000 Rh1CG196100 Rh1CG196400 Rh1CG196500 Rh1CG196800 Rh1CG198800 Rh1CG442600 Rh1DG086200 Rh1DG155400 Rh1DG156200 Rh1DG194000 Rh1DG194300 Rh1DG194900 Rh1DG197000 Rh1DG198800 Rh1DG199000 Rh1DG199200 Rh1DG202000 Rh1DG203900 Rh1DG207600 Rh1DG207900 Rh1DG208000 Rh1DG208500 Rh1DG208600 Rh1DG208700 Rh3CG339100 Rh5AG106500 Rh5AG264800 Rh5AG265300 Rh5CG302800 Rh5DG277900 Rh6AG257600 Rh6AG257700 Rh6BG260500 Rh6BG260700 Rh6CG259600 Rh6CG259700 Rh6DG252100 Rh7DG126900
rosa_wichuraiana Rw0G005780 Rw0G007540 Rw0G007550 Rw0G007560 Rw0G009390 Rw1G016900 Rw1G016930 Rw1G016940 Rw1G016970 Rw1G017860 Rw1G017890 Rw1G017900 Rw1G017910 Rw1G017920 Rw1G017960 Rw1G017970 Rw1G017980 Rw1G018150 Rw4G000830 Rw5G009290 Rw5G018950 Rw5G024850 Rw5G024870 Rw5G040460 Rw6G022290 Rw7G041020 Rw7G041200 Rw7G041360 Rw7G041450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1556
AccB1I GGYRCC 1 cut(s) 1783
AccI GTMKAC 1 cut(s) 1705
AccII CGCG 1 cut(s) 1251
AciI CCGC 4 cut(s) 1325, 1547, 1591, 1829
AclWI GGATC 9 cut(s) 57, 67, 80, 1310, 1335, 1640, 1653, 1683, 1740
AcoI YGGCCR 2 cut(s) 1299, 1736
AcsI RAATTY 2 cut(s) 951, 1901
AcuI CTGAAG 3 cut(s) 285, 456, 763
AcyI GRCGYC 1 cut(s) 1553
AfaI GTAC 9 cut(s) 196, 256, 284, 328, 1459, 1627, 1798, 1858, 1979
AfiI CCNNNNNNNGG 2 cut(s) 1032, 1655
AflIII ACRYGT 2 cut(s) 135, 344
AgeI ACCGGT 1 cut(s) 715
AgsI TTSAA 8 cut(s) 9, 247, 273, 605, 772, 795, 842, 1264
AhdI GACNNNNNGTC 1 cut(s) 1489
AjnI CCWGG 1 cut(s) 1935
AluBI AGCT 8 cut(s) 564, 645, 662, 756, 767, 914, 1047, 1194
AluI AGCT 8 cut(s) 564, 645, 662, 756, 767, 914, 1047, 1194
Alw21I GWGCWC 3 cut(s) 1071, 1196, 1974
Alw26I GTCTC 3 cut(s) 85, 1110, 1338
Alw44I GTGCAC 1 cut(s) 1067
AlwI GGATC 9 cut(s) 57, 67, 80, 1310, 1335, 1640, 1653, 1683, 1740
AoxI GGCC 2 cut(s) 1299, 1736
ApaLI GTGCAC 1 cut(s) 1067
ApeKI GCWGC 4 cut(s) 38, 662, 1452, 1992
ApoI RAATTY 2 cut(s) 951, 1901
ArsI GACNNNNNNTTYG 2 cut(s) 368, 400
AseI ATTAAT 1 cut(s) 860
AsiGI ACCGGT 1 cut(s) 715
AspLEI GCGC 1 cut(s) 1251
AspS9I GGNCC 4 cut(s) 178, 713, 1183, 1910
AsuHPI GGTGA 6 cut(s) 748, 904, 1140, 1159, 1517, 1522
AvaII GGWCC 4 cut(s) 178, 713, 1183, 1910
BaeGI GKGCMC 1 cut(s) 1071
BamHI GGATCC 2 cut(s) 72, 1645
BanI GGYRCC 1 cut(s) 1783
BanII GRGCYC 1 cut(s) 1196
BbsI GAAGAC 4 cut(s) 27, 444, 1287, 1485
Bbv12I GWGCWC 3 cut(s) 1071, 1196, 1974
BbvI GCAGC 4 cut(s) 25, 649, 1439, 2004
BccI CCATC 6 cut(s) 152, 590, 1101, 1194, 1572, 2000
BceAI ACGGC 2 cut(s) 1286, 1996
BcgI CGANNNNNNTGC 2 cut(s) 1278, 1312
BciT130I CCWGG 1 cut(s) 1937
BclI TGATCA 1 cut(s) 1060
BcoDI GTCTC 3 cut(s) 85, 1110, 1338
BfaI CTAG 4 cut(s) 44, 267, 915, 1634
BglII AGATCT 4 cut(s) 572, 1431, 1504, 1580
BisI GCNGC 6 cut(s) 39, 663, 1453, 1548, 1592, 1993
BlsI GCNGC 6 cut(s) 40, 664, 1454, 1549, 1593, 1994
BmcAI AGTACT 1 cut(s) 328
Bme1390I CCNGG 1 cut(s) 1937
Bme18I GGWCC 4 cut(s) 178, 713, 1183, 1910
BmeRI GACNNNNNGTC 1 cut(s) 1489
BmgT120I GGNCC 4 cut(s) 178, 713, 1183, 1910
BmiI GGNNCC 6 cut(s) 74, 179, 241, 1024, 1647, 1785
BmrFI CCNGG 1 cut(s) 1937
BmrI ACTGGG 2 cut(s) 704, 750
BmsI GCATC 3 cut(s) 266, 392, 1124
BmuI ACTGGG 2 cut(s) 704, 750
BoxI GACNNNNGTC 1 cut(s) 963
BpiI GAAGAC 4 cut(s) 27, 444, 1287, 1485
Bpu10I CCTNAGC 1 cut(s) 1973
BpuEI CTTGAG 2 cut(s) 837, 865
BsaAI YACGTR 1 cut(s) 1796
BsaBI GATNNNNATC 1 cut(s) 1138
BsaHI GRCGYC 1 cut(s) 1553
BsaJI CCNNGG 3 cut(s) 1027, 1179, 1779
BsaWI WCCGGW 2 cut(s) 180, 715
Bsc4I CCNNNNNNNGG 2 cut(s) 1032, 1655
Bse118I RCCGGY 1 cut(s) 715
Bse8I GATNNNNATC 1 cut(s) 1138
BseBI CCWGG 1 cut(s) 1937
BseDI CCNNGG 3 cut(s) 1027, 1179, 1779
BseGI GGATG 4 cut(s) 407, 601, 1139, 1402
BseJI GATNNNNATC 1 cut(s) 1138
BseLI CCNNNNNNNGG 2 cut(s) 1032, 1655
BseMII CTCAG 2 cut(s) 1383, 1987
BseRI GAGGAG 2 cut(s) 250, 1135
BseSI GKGCMC 1 cut(s) 1071
BseX3I CGGCCG 2 cut(s) 1299, 1736
BseXI GCAGC 4 cut(s) 25, 649, 1439, 2004
BsgI GTGCAG 3 cut(s) 187, 1272, 1569
Bsh1236I CGCG 1 cut(s) 1251
Bsh1285I CGRYCG 2 cut(s) 1302, 1739
BshFI GGCC 2 cut(s) 1301, 1738
BshNI GGYRCC 1 cut(s) 1783
BshTI ACCGGT 1 cut(s) 715
BsiEI CGRYCG 2 cut(s) 1302, 1739
BsiHKAI GWGCWC 3 cut(s) 1071, 1196, 1974
BsiSI CCGG 2 cut(s) 181, 716
BslFI GGGAC 4 cut(s) 191, 711, 1228, 1293
BslI CCNNNNNNNGG 2 cut(s) 1032, 1655
BsmAI GTCTC 3 cut(s) 85, 1110, 1338
BsmFI GGGAC 4 cut(s) 191, 711, 1228, 1293
BsmI GAATGC 1 cut(s) 790
BsnI GGCC 2 cut(s) 1301, 1738
Bsp1286I GDGCHC 3 cut(s) 1071, 1196, 1974
Bsp1407I TGTACA 1 cut(s) 194
Bsp19I CCATGG 2 cut(s) 1027, 1779
BspACI CCGC 4 cut(s) 1325, 1547, 1591, 1829
BspANI GGCC 2 cut(s) 1301, 1738
BspCNI CTCAG 2 cut(s) 1384, 1986
BspFNI CGCG 1 cut(s) 1251
BspHI TCATGA 2 cut(s) 567, 1833
BspLI GGNNCC 6 cut(s) 74, 179, 241, 1024, 1647, 1785
BspPI GGATC 9 cut(s) 57, 67, 80, 1310, 1335, 1640, 1653, 1683, 1740
BspT107I GGYRCC 1 cut(s) 1783
BsrFI RCCGGY 1 cut(s) 715
BsrGI TGTACA 1 cut(s) 194
BssAI RCCGGY 1 cut(s) 715
BssECI CCNNGG 3 cut(s) 1027, 1179, 1779
BssNI GRCGYC 1 cut(s) 1553
BssT1I CCWWGG 3 cut(s) 1027, 1179, 1779
Bst2UI CCWGG 1 cut(s) 1937
Bst4CI ACNGT 4 cut(s) 194, 1270, 1293, 1957
BstACI GRCGYC 1 cut(s) 1553
BstAUI TGTACA 1 cut(s) 194
BstBAI YACGTR 1 cut(s) 1796
BstC8I GCNNGC 1 cut(s) 1806
BstDEI CTNAG 5 cut(s) 77, 560, 1392, 1685, 1973
BstDSI CCRYGG 2 cut(s) 1027, 1779
BstF5I GGATG 4 cut(s) 407, 601, 1139, 1402
BstFNI CGCG 1 cut(s) 1251
BstHHI GCGC 1 cut(s) 1251
BstMAI GTCTC 3 cut(s) 85, 1110, 1338
BstMCI CGRYCG 2 cut(s) 1302, 1739
BstMWI GCNNNNNNNGC 3 cut(s) 1461, 1790, 1989
BstNI CCWGG 1 cut(s) 1937
BstNSI RCATGY 4 cut(s) 139, 348, 672, 808
BstPAI GACNNNNGTC 1 cut(s) 963
BstSCI CCNGG 1 cut(s) 1935
BstSLI GKGCMC 1 cut(s) 1071
BstUI CGCG 1 cut(s) 1251
BstV1I GCAGC 4 cut(s) 25, 649, 1439, 2004
BstV2I GAAGAC 4 cut(s) 27, 444, 1287, 1485
BstX2I RGATCY 6 cut(s) 72, 572, 1431, 1504, 1580, 1645
BstXI CCANNNNNNTGG 1 cut(s) 1846
BstYI RGATCY 6 cut(s) 72, 572, 1431, 1504, 1580, 1645
BstZI CGGCCG 2 cut(s) 1299, 1736
BsuRI GGCC 2 cut(s) 1301, 1738
BtgI CCRYGG 2 cut(s) 1027, 1779
BtsCI GGATG 4 cut(s) 407, 601, 1139, 1402
BtsI GCAGTG 2 cut(s) 1586, 1974
BtsIMutI CAGTG 6 cut(s) 153, 692, 1586, 1846, 1905, 1974
Cac8I GCNNGC 1 cut(s) 1806
CciI TCATGA 2 cut(s) 567, 1833
CfoI GCGC 1 cut(s) 1251
Cfr10I RCCGGY 1 cut(s) 715
Cfr13I GGNCC 4 cut(s) 178, 713, 1183, 1910
CseI GACGC 1 cut(s) 639
Csp6I GTAC 9 cut(s) 195, 255, 283, 327, 1458, 1626, 1797, 1857, 1978
CspAI ACCGGT 1 cut(s) 715
CspCI CAANNNNNGTGG 2 cut(s) 573, 608
CviQI GTAC 9 cut(s) 195, 255, 283, 327, 1458, 1626, 1797, 1857, 1978
DdeI CTNAG 5 cut(s) 77, 560, 1392, 1685, 1973
DraI TTTAAA 1 cut(s) 910
DriI GACNNNNNGTC 1 cut(s) 1489
EaeI YGGCCR 2 cut(s) 1299, 1736
EagI CGGCCG 2 cut(s) 1299, 1736
Eam1105I GACNNNNNGTC 1 cut(s) 1489
Ecl136II GAGCTC 1 cut(s) 1194
EclXI CGGCCG 2 cut(s) 1299, 1736
Eco130I CCWWGG 3 cut(s) 1027, 1179, 1779
Eco24I GRGCYC 1 cut(s) 1196
Eco32I GATATC 1 cut(s) 1085
Eco47I GGWCC 4 cut(s) 178, 713, 1183, 1910
Eco52I CGGCCG 2 cut(s) 1299, 1736
Eco53kI GAGCTC 1 cut(s) 1194
Eco57I CTGAAG 3 cut(s) 285, 456, 763
EcoICRI GAGCTC 1 cut(s) 1194
EcoRI GAATTC 1 cut(s) 1901
EcoRII CCWGG 1 cut(s) 1935
EcoRV GATATC 1 cut(s) 1085
EcoT14I CCWWGG 3 cut(s) 1027, 1179, 1779
EcoT38I GRGCYC 1 cut(s) 1196
ErhI CCWWGG 3 cut(s) 1027, 1179, 1779
FalI AAGNNNNNCTT 2 cut(s) 543, 575
FaqI GGGAC 4 cut(s) 191, 711, 1228, 1293
FbaI TGATCA 1 cut(s) 1060
FblI GTMKAC 1 cut(s) 1705
Fnu4HI GCNGC 6 cut(s) 39, 663, 1453, 1548, 1592, 1993
FokI GGATG 4 cut(s) 414, 608, 1126, 1409
FriOI GRGCYC 1 cut(s) 1196
Fsp4HI GCNGC 6 cut(s) 39, 663, 1453, 1548, 1592, 1993
FspBI CTAG 4 cut(s) 44, 267, 915, 1634
GlaI GCGC 1 cut(s) 1250
GluI GCNGC 6 cut(s) 39, 663, 1453, 1548, 1592, 1993
HaeIII GGCC 2 cut(s) 1301, 1738
HapII CCGG 2 cut(s) 181, 716
HgaI GACGC 1 cut(s) 639
HhaI GCGC 1 cut(s) 1251
Hin1I GRCGYC 1 cut(s) 1553
Hin6I GCGC 1 cut(s) 1249
HinP1I GCGC 1 cut(s) 1249
HindIII AAGCTT 1 cut(s) 765
HinfI GANTC 7 cut(s) 895, 943, 1118, 1158, 1484, 1661, 1874
HpaII CCGG 2 cut(s) 181, 716
HphI GGTGA 6 cut(s) 748, 904, 1140, 1159, 1517, 1522
Hpy166II GTNNAC 4 cut(s) 721, 1069, 1255, 1706
Hpy188III TCNNGA 6 cut(s) 44, 273, 568, 882, 982, 1834
Hpy8I GTNNAC 4 cut(s) 721, 1069, 1255, 1706
Hpy99I CGWCG 3 cut(s) 1205, 1501, 1555
HpyAV CCTTC 6 cut(s) 168, 253, 836, 1347, 1616, 1923
HpyCH4III ACNGT 4 cut(s) 194, 1270, 1293, 1957
HpyCH4IV ACGT 3 cut(s) 1514, 1553, 1795
HpyF10VI GCNNNNNNNGC 3 cut(s) 1461, 1790, 1989
HpyF3I CTNAG 5 cut(s) 77, 560, 1392, 1685, 1973
HpySE526I ACGT 3 cut(s) 1514, 1553, 1795
Hsp92I GRCGYC 1 cut(s) 1553
HspAI GCGC 1 cut(s) 1249
Ksp22I TGATCA 1 cut(s) 1060
LmnI GCTCC 2 cut(s) 1181, 1191
Lsp1109I GCAGC 4 cut(s) 25, 649, 1439, 2004
LweI GCATC 3 cut(s) 266, 392, 1124
MaeI CTAG 4 cut(s) 44, 267, 915, 1634
MaeII ACGT 3 cut(s) 1514, 1553, 1795
MaeIII GTNAC 7 cut(s) 425, 736, 807, 1375, 1510, 1523, 1554
MflI RGATCY 6 cut(s) 72, 572, 1431, 1504, 1580, 1645
MhlI GDGCHC 3 cut(s) 1071, 1196, 1974
MlyI GAGTC 2 cut(s) 1152, 1478
MmeI TCCRAC 3 cut(s) 981, 1461, 1673
MseI TTAA 7 cut(s) 291, 632, 831, 860, 909, 1130, 1227
MspA1I CMGCKG 1 cut(s) 1829
MspI CCGG 2 cut(s) 181, 716
MspR9I CCNGG 1 cut(s) 1937
Mva1269I GAATGC 1 cut(s) 790
MvaI CCWGG 1 cut(s) 1937
MvnI CGCG 1 cut(s) 1251
MwoI GCNNNNNNNGC 3 cut(s) 1461, 1790, 1989
NcoI CCATGG 2 cut(s) 1027, 1779
NlaIV GGNNCC 6 cut(s) 74, 179, 241, 1024, 1647, 1785
NmuCI GTSAC 5 cut(s) 425, 736, 1510, 1523, 1554
NspI RCATGY 4 cut(s) 139, 348, 672, 808
PagI TCATGA 2 cut(s) 567, 1833
PciI ACATGT 2 cut(s) 135, 344
PctI GAATGC 1 cut(s) 790
PfeI GAWTC 5 cut(s) 895, 943, 1118, 1661, 1874
PflFI GACNNNGTC 1 cut(s) 113
PinAI ACCGGT 1 cut(s) 715
PkrI GCNGC 6 cut(s) 40, 664, 1454, 1549, 1593, 1994
PleI GAGTC 2 cut(s) 1152, 1478
PpsI GAGTC 2 cut(s) 1152, 1478
Ppu21I YACGTR 1 cut(s) 1796
PscI ACATGT 2 cut(s) 135, 344
PshAI GACNNNNGTC 1 cut(s) 963
PshBI ATTAAT 1 cut(s) 860
Psp124BI GAGCTC 1 cut(s) 1196
Psp6I CCWGG 1 cut(s) 1935
PspGI CCWGG 1 cut(s) 1935
PspN4I GGNNCC 6 cut(s) 74, 179, 241, 1024, 1647, 1785
PspPI GGNCC 4 cut(s) 178, 713, 1183, 1910
PsuI RGATCY 6 cut(s) 72, 572, 1431, 1504, 1580, 1645
PsyI GACNNNGTC 1 cut(s) 113
RsaI GTAC 9 cut(s) 196, 256, 284, 328, 1459, 1627, 1798, 1858, 1979
RsaNI GTAC 9 cut(s) 195, 255, 283, 327, 1458, 1626, 1797, 1857, 1978
SacI GAGCTC 1 cut(s) 1196
SaqAI TTAA 7 cut(s) 291, 632, 831, 860, 909, 1130, 1227
SatI GCNGC 6 cut(s) 39, 663, 1453, 1548, 1592, 1993
Sau96I GGNCC 4 cut(s) 178, 713, 1183, 1910
ScaI AGTACT 1 cut(s) 328
SchI GAGTC 2 cut(s) 1152, 1478
ScrFI CCNGG 1 cut(s) 1937
SduI GDGCHC 3 cut(s) 1071, 1196, 1974
SfaNI GCATC 3 cut(s) 266, 392, 1124
SinI GGWCC 4 cut(s) 178, 713, 1183, 1910
SmlI CTYRAG 2 cut(s) 852, 880
SmoI CTYRAG 2 cut(s) 852, 880
SsiI CCGC 4 cut(s) 1325, 1547, 1591, 1829
SspI AATATT 1 cut(s) 1600
SspMI CTAG 4 cut(s) 44, 267, 915, 1634
SstI GAGCTC 1 cut(s) 1196
StyD4I CCNGG 1 cut(s) 1935
StyI CCWWGG 3 cut(s) 1027, 1179, 1779
TaaI ACNGT 4 cut(s) 194, 1270, 1293, 1957
TaiI ACGT 3 cut(s) 1517, 1556, 1798
TaqI TCGA 1 cut(s) 1872
TatI WGTACW 3 cut(s) 194, 326, 1457
TauI GCSGC 2 cut(s) 1550, 1594
TfiI GAWTC 5 cut(s) 895, 943, 1118, 1661, 1874
Tru1I TTAA 7 cut(s) 291, 632, 831, 860, 909, 1130, 1227
Tru9I TTAA 7 cut(s) 291, 632, 831, 860, 909, 1130, 1227
TscAI CASTG 6 cut(s) 160, 699, 1593, 1846, 1912, 1974
TseFI GTSAC 5 cut(s) 425, 736, 1510, 1523, 1554
TseI GCWGC 4 cut(s) 38, 662, 1452, 1992
Tsp45I GTSAC 5 cut(s) 425, 736, 1510, 1523, 1554
TspDTI ATGAA 7 cut(s) 33, 75, 556, 887, 1005, 1110, 1653
TspGWI ACGGA 1 cut(s) 627
TspRI CASTG 6 cut(s) 160, 699, 1593, 1846, 1912, 1974
Tth111I GACNNNGTC 1 cut(s) 113
VneI GTGCAC 1 cut(s) 1067
VpaK11BI GGWCC 4 cut(s) 178, 713, 1183, 1910
VspI ATTAAT 1 cut(s) 860
XapI RAATTY 2 cut(s) 951, 1901
XbaI TCTAGA 1 cut(s) 43
XceI RCATGY 4 cut(s) 139, 348, 672, 808
XmiI GTMKAC 1 cut(s) 1705
XspI CTAG 4 cut(s) 44, 267, 915, 1634
ZraI GACGTC 1 cut(s) 1554
ZrmI AGTACT 1 cut(s) 328
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.