Rh1DG208600

TMV resistance protein N-like

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1D
Physical Location & Seq
Forward (+)
40741817 .. 40746846
5030 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1DG208600.1

Sequence Viewer

Length: 2127 bp
ATGTACCGGTACCCTGTCGTCTTGGAAACCAATGCATTTGCAGGGATGCACAAACTGAGATTACTCCAACTTGGTTATGTAAAACTGACTGGAAGTTGTGAAGAACTTCCCAAGCGGTTGAAATGGTTGTGCTGGCTTCAGTTTCCTTTGGATTCTATACGCATCAGTTTTCCTTTGGAAAGCCTGGTCGTTCTAGAAATGTCTTGCAGTAGCTTGAGAAAACTCTGGCGGGGAACAAAGCATCTTCCATCTTTGAAGATCCTTGATCTCCGCCATTCCCATGACCTGATAAAAAGCGGTGACTTCTCATTGGTCCCCAATCTAGAGAGACTGATATTTGAAGATTGTTCAAGCTTGGTTGATGTCCATGAATCTGTTGGAAACTTAGAGAAGCTCGTATACTTGAACATGAGGGATTGCAAAAGTATTGGCAAACTTCCAAAGAACATTTGTATGCTGAAAGTACTAGAGACACTTATTATATCCGGTTGCTCAAATCTTTATGAGTTTCCAATGGAGGTTGGGAAGATGAAATTTCTGAAAGTTCTTGAAGCAGATGGAATTTCAATAAATCGATTAGTCACAACTTCTGGGGAAGCTGAATCATGGCCAAGAAAAAGTGTTGATAACTTTTGGGCTTGTTTGTCCTGCACTTTAGTTCATTTAAGTCTTCCACATTGCAATCTTTCTGATGATGCTTTTCCTTCTGATGCTGTTAACTTATACTCATTGAAGGGTTTGGATCTCAGCAATAATCCAATTTGTAGCTTACCAGATTTCGTCAGAGGCCTTAGAGGGCTCAATTCAATGTTACTTTGGGGGTGCAGAGATCTCAAATCACTTGTAAGGTTACCAAGAGTAAGAACTTTGGATGTCCACTTGTGTGAATCCTTGGAAAGTGTAACGTTTCAATCGATATCGTGCATACCAGAGTCAATAGCCTTGATTGCTTACAAGTCCCAACTAGTTGAGATTGAGTACTGGTTCAAGTTAGAAGCCATTGAAAAAGTGGATTTAGAAATGATCAAGCTTTTGTGTTTGTGCAACTTGGAATCCATGGAACGCATTTGGATGCACACCCCATATAACAACGCTGAAGTGACGATGCTTCCCATCCAGGGACTGTATGAATATGGTATATTTAGCACATTTCTTCCTACAAAGGGAAACGACGTTCCAGGGCAGTTCAGCCATACAAGTACAGGGTCATCACGTTCAATGTCCTTTACTGTGCCTGCACCTTTACTTCCTAATCAAAGGATCCGAGGCTTGAACATCTTCTGTGTATATGCAAACTACGATGTTGACGTCAGGTGCATTGATCCAATAATAATTAGAGTCAATAATAAGAGCAAAGGTCTGAAGTGGATCTATGGACCAACATGTTACGGCATTCCAAGCCATAATGAAAAAGATGTGGTATGGTTAAGCCATTGGAAGTTGGGAAATCGATTGGAAGCTGGCGATGAAGTTACTGTTACAGTATTTCCATTTGAACCATTCCAGATAAAAGAGTGGGGCTTCCAGGTTGTGCATGAGCAAGAAGGCAAAATAAGTAACCAACACAACACCACATATCCAGATGATAATGACGTTATTGGTAAATATTGTACAGATTTTTCCGAATTATACCAGGTGATGCCGGGAACATACTTCCTCTGCGGTGGACCTATGATATATGATAGACAGTCACATTTATTACAAAAAGGGTCAGTTTTGTTCAATCACATTATTGGAGATTCTGATGAAAGTGCAGGTGTGTTGTTACTGATAAATTGGCATTACAAGCTTATTTTATTGATGGTATATTTGTTTCTTGTCACCGAAATAATGTGGACGTTTGCAGCAACAAAAGAAGCAATGAGAGACCGAAAAAAGTTCTGCAGTAGGAGTGGGCTTGTTACCATTACTGGTGCTATGTCTTTGATTTGCAGTCCAGGCCGCATTTCAAAAGAAGGAAGGAAATCCAAGCCAAAAATTAAATACACTAGTTTAACCCAGCCAAAAGCTCAACCTTTACTAGTTCGCATTCTCTTTTGCTTTTTCCTTCTTTTGGTTCAACATGTTGCAGTTTCTTTTTTGATAAAGAAGTTTTTTATCTCCTATCAAGATCATTATTCCGAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

708

Amino Acids

80.78

Weight (kDa)

8.06

Isoelectric Point (pI)

37.23

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 111 - 186 4.7e-09 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000036)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G57630 AT1G72930 AT5G38344
fragaria_vesca FvH4_1g27020 FvH4_2g00931 FvH4_2g17330 FvH4_2g17330 FvH4_2g17340 FvH4_2g17350 FvH4_2g20690 FvH4_5g15301 FvH4_5g34194 FvH4_5g38530 FvH4_5g38740 FvH4_5g38740 FvH4_5g38740 FvH4_6g03800 FvH4_7g09791 FvH4_7g09800 FvH4_7g09800 FvH4_7g10510 FvH4_7g10520 FvH4_7g10520 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750
malus_domestica MD02G1217100.v1.1 MD02G1217200.v1.1 MD02G1217400.v1.1 MD02G1217600.v1.1 MD02G1264800.v1.1 MD02G1264900.v1.1 MD02G1302100.v1.1 MD04G1010700.v1.1 MD05G1006800.v1.1 MD05G1140100.v1.1 MD05G1140200.v1.1 MD05G1152200.v1.1 MD07G1073500.v1.1 MD07G1101700.v1.1 MD07G1102200.v1.1 MD07G1103200.v1.1 MD07G1112300.v1.1 MD08G1018200.v1.1 MD08G1018400.v1.1 MD08G1018800.v1.1 MD08G1019000.v1.1 MD08G1019100.v1.1 MD08G1019200.v1.1 MD08G1019300.v1.1 MD08G1019400.v1.1 MD08G1019600.v1.1 MD08G1019900.v1.1 MD08G1020000.v1.1 MD08G1020200.v1.1 MD08G1020500.v1.1 MD08G1020700.v1.1 MD08G1020800.v1.1 MD08G1040700.v1.1 MD11G1112400.v1.1 MD12G1068600.v1.1 MD12G1193200.v1.1 MD13G1050600.v1.1 MD15G1374900.v1.1 MD15G1375100.v1.1 MD15G1416500.v1.1 MD17G1072500.v1.1 MD17G1274200.v1.1 MD17G1274900.v1.1
prunus_persica Prupe.2G121000_v2.0.a1 Prupe.2G121000_v2.0.a1 Prupe.2G125800_v2.0.a1 Prupe.2G126000_v2.0.a1 Prupe.2G126100_v2.0.a1 Prupe.2G126200_v2.0.a1 Prupe.2G126300_v2.0.a1 Prupe.2G126400_v2.0.a1 Prupe.2G126500_v2.0.a1 Prupe.2G126600_v2.0.a1 Prupe.2G126700_v2.0.a1 Prupe.2G126700_v2.0.a1 Prupe.2G126800_v2.0.a1 Prupe.2G126900_v2.0.a1 Prupe.2G127000_v2.0.a1 Prupe.2G127000_v2.0.a1 Prupe.2G127000_v2.0.a1 Prupe.2G127000_v2.0.a1 Prupe.2G135500_v2.0.a1 Prupe.2G135600_v2.0.a1 Prupe.2G135700_v2.0.a1 Prupe.2G135700_v2.0.a1 Prupe.3G009800_v2.0.a1 Prupe.3G010200_v2.0.a1 Prupe.3G131000_v2.0.a1 Prupe.4G260800_v2.0.a1 Prupe.4G260900_v2.0.a1 Prupe.6G083100_v2.0.a1 Prupe.6G083200_v2.0.a1 Prupe.6G083400_v2.0.a1 Prupe.6G132100_v2.0.a1 Prupe.8G184900_v2.0.a1 Prupe.8G185200_v2.0.a1 Prupe.8G185300_v2.0.a1
pyrus_communis pycom02g17870 pycom02g17880 pycom02g19520 pycom02g22610 pycom02g22630 pycom02g22680 pycom05g13540 pycom05g14680 pycom07g04880 pycom07g04890 pycom07g05690 pycom07g05710 pycom07g05720 pycom07g05750 pycom07g05780 pycom07g06300 pycom07g08320 pycom07g08330 pycom07g08350 pycom07g08360 pycom07g08370 pycom07g08410 pycom07g08420 pycom07g08430 pycom07g08440 pycom07g08470 pycom07g08480 pycom07g08520 pycom07g08550 pycom07g08560 pycom07g08640 pycom07g08660 pycom07g08670 pycom07g08680 pycom07g08690 pycom07g08720 pycom07g08730 pycom07g08790 pycom07g08800 pycom07g08810 pycom07g08860 pycom07g08890 pycom07g09720 pycom08g01590 pycom08g01600 pycom08g01620 pycom08g01630 pycom08g01640 pycom10g12630 pycom15g16490 pycom17g07200 pycom17g07210 pycom17g07220 pycom17g11730 pycom17g11740 pycom17g27340 pycom17g27380
rosa_chinensis RchiOBHm_Chr1g0342571 RchiOBHm_Chr1g0346231 RchiOBHm_Chr1g0346831 RchiOBHm_Chr1g0346891 RchiOBHm_Chr1g0348311 RchiOBHm_Chr1g0348321 RchiOBHm_Chr1g0348331 RchiOBHm_Chr1g0348361 RchiOBHm_Chr1g0348371 RchiOBHm_Chr1g0348381 RchiOBHm_Chr1g0348401 RchiOBHm_Chr1g0348411 RchiOBHm_Chr1g0348421 RchiOBHm_Chr1g0348431 RchiOBHm_Chr2g0130881 RchiOBHm_Chr3g0487331 RchiOBHm_Chr5g0060371 RchiOBHm_Chr6g0246491 RchiOBHm_Chr6g0246871 RchiOBHm_Chr6g0250311 RchiOBHm_Chr6g0250781 RchiOBHm_Chr6g0251431 RchiOBHm_Chr6g0281871 RchiOBHm_Chr6g0281881 RchiOBHm_Chr6g0281931 RchiOBHm_Chr6g0281941 RchiOBHm_Chr6g0281951 RchiOBHm_Chr6g0281971 RchiOBHm_Chr6g0281981 RchiOBHm_Chr7g0240541 RchiOBHm_Chr7g0240631 RchiOBHm_Chr7g0240671
rosa_laevigata RLG00000000627 RLG00000000631 RLG00000000641 RLG00000000645 RLG00000000652 RLG00000000662 RLG00000000663 RLG00000000667 RLG00000000670 RLG00000000702 RLG00000001216 RLG00000001219 RLG00000007678 RLG00000012923 RLG00000012996 RLG00000013243 RLG00000017513 RLG00000017514 RLG00000020936 RLG00000022755 RLG00000023013 RLG00000028646 RLG00000028654 RLG00000028662 RLG00000028665 RLG00000028667 RLG00000028711 RLG00000028714 RLG00000028716 RLG00000028770 RLG00000028771 RLG00000028773 RLG00000028778 RLG00000028798 RLG00000028809 RLG00000028813 RLG00000029334 RLG00000030003 RLG00000033910 RLG00000034358 RLG00000035430
rosa_multiflora Rmu_co8031134.1_g000001 Rmu_co8092796.1_g000001 Rmu_co8130156.1_g000001 Rmu_co8325323.1_g000001 Rmu_co8424083.1_g000002 Rmu_sc0000008.1_g000003 Rmu_sc0000008.1_g000011 Rmu_sc0000008.1_g000015 Rmu_sc0000008.1_g000020 Rmu_sc0000091.1_g000015 Rmu_sc0000091.1_g000018 Rmu_sc0000091.1_g000029 Rmu_sc0000091.1_g000031 Rmu_sc0000391.1_g000004 Rmu_sc0001070.1_g000030 Rmu_sc0001293.1_g000016 Rmu_sc0001674.1_g000006 Rmu_sc0001731.1_g000002 Rmu_sc0001731.1_g000003 Rmu_sc0001731.1_g000005 Rmu_sc0001911.1_g000029 Rmu_sc0001913.1_g000038 Rmu_sc0001955.1_g000025 Rmu_sc0001992.1_g000022 Rmu_sc0001992.1_g000028 Rmu_sc0001992.1_g000031 Rmu_sc0002517.1_g000013 Rmu_sc0002517.1_g000017 Rmu_sc0002551.1_g000022 Rmu_sc0002551.1_g000029 Rmu_sc0002551.1_g000038 Rmu_sc0002705.1_g000015 Rmu_sc0002705.1_g000016 Rmu_sc0002882.1_g000055 Rmu_sc0003232.1_g000027 Rmu_sc0003363.1_g000037 Rmu_sc0003600.1_g000054 Rmu_sc0003918.1_g000011 Rmu_sc0004395.1_g000011 Rmu_sc0005071.1_g000004 Rmu_sc0005255.1_g000018 Rmu_sc0005327.1_g000004 Rmu_sc0005597.1_g000007 Rmu_sc0007060.1_g000007 Rmu_sc0007310.1_g000003 Rmu_sc0007383.1_g000014 Rmu_sc0007799.1_g000003 Rmu_sc0008477.1_g000016 Rmu_sc0010151.1_g000009 Rmu_sc0011217.1_g000005 Rmu_sc0016269.1_g000006 Rmu_sc0021495.1_g000001 Rmu_sc0027364.1_g000001 Rmu_sc0029432.1_g000001 Rmu_sc0041386.1_g000001 Rmu_ssc0000126.1_g000023 Rmu_ssc0000126.1_g000027
rosa_roxburghii Rroxscaffold_1G00006130 Rroxscaffold_1G00023320 Rroxscaffold_1G00038770 Rroxscaffold_2G00119800 Rroxscaffold_2G00121860 Rroxscaffold_3G00219780 Rroxscaffold_3G00219890 Rroxscaffold_4G00306740 Rroxscaffold_4G00306820 Rroxscaffold_4G00307000 Rroxscaffold_4G00307010 Rroxscaffold_4G00307020 Rroxscaffold_4G00308030 Rroxscaffold_4G00308070 Rroxscaffold_4G00308450 Rroxscaffold_4G00308460 Rroxscaffold_4G00315320 Rroxscaffold_5G00352470 Rroxscaffold_5G00371420 Rroxscaffold_6G00392300 Rroxscaffold_6G00394870 Rroxscaffold_6G00394890 Rroxscaffold_7G00186700 Rroxscaffold_7G00194980 Rroxscaffold_7G00216840
rosa_rugosa Rorug01G0076100 Rorug01G0128100 Rorug01G0149000.1 Rorug01G0149500.1 Rorug01G0180000 Rorug01G0180100 Rorug01G0182900 Rorug01G0184000 Rorug01G0184100 Rorug01G0184300 Rorug01G0184600 Rorug01G0184700 Rorug01G0184700 Rorug01G0184900 Rorug01G0185000 Rorug01G0185100 Rorug01G0189300 Rorug01G0194100 Rorug01G0194100 Rorug01G0194200 Rorug01G0194400 Rorug01G0194400 Rorug01G0194500 Rorug02G0090400 Rorug02G0090400 Rorug03G0233000 Rorug03G0233100 Rorug05G0178600 Rorug05G0178700 Rorug05G0579200 Rorug06G0144100 Rorug06G0144300 Rorug06G0144300 Rorug06G0179300 Rorug06G0208800 Rorug07G0323500 Rorug07G0337000
rosa_samantha Rh1AG046100 Rh1AG201400 Rh1AG201800 Rh1AG202100 Rh1AG202600 Rh1AG211500 Rh1AG211800 Rh1AG212200 Rh1AG212500 Rh1AG212600 Rh1AG214200 Rh1BG168000 Rh1BG168300 Rh1BG168500 Rh1BG177900 Rh1BG178200 Rh1BG178300 Rh1BG178800 Rh1BG178900 Rh1CG080900 Rh1CG183300 Rh1CG186300 Rh1CG186700 Rh1CG187000 Rh1CG187300 Rh1CG193400 Rh1CG195800 Rh1CG196000 Rh1CG196100 Rh1CG196400 Rh1CG196500 Rh1CG196800 Rh1CG198800 Rh1CG442600 Rh1DG086200 Rh1DG155400 Rh1DG156200 Rh1DG194000 Rh1DG194300 Rh1DG194900 Rh1DG197000 Rh1DG198800 Rh1DG199000 Rh1DG199200 Rh1DG202000 Rh1DG203900 Rh1DG207600 Rh1DG207900 Rh1DG208000 Rh1DG208500 Rh1DG208600 Rh1DG208700 Rh3CG339100 Rh5AG106500 Rh5AG264800 Rh5AG265300 Rh5CG302800 Rh5DG277900 Rh6AG257600 Rh6AG257700 Rh6BG260500 Rh6BG260700 Rh6CG259600 Rh6CG259700 Rh6DG252100 Rh7DG126900
rosa_wichuraiana Rw0G005780 Rw0G007540 Rw0G007550 Rw0G007560 Rw0G009390 Rw1G016900 Rw1G016930 Rw1G016940 Rw1G016970 Rw1G017860 Rw1G017890 Rw1G017900 Rw1G017910 Rw1G017920 Rw1G017960 Rw1G017970 Rw1G017980 Rw1G018150 Rw4G000830 Rw5G009290 Rw5G018950 Rw5G024850 Rw5G024870 Rw5G040460 Rw6G022290 Rw7G041020 Rw7G041200 Rw7G041360 Rw7G041450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1745
AatII GACGTC 1 cut(s) 1311
Acc36I ACCTGC 1 cut(s) 1745
Acc65I GGTACC 1 cut(s) 9
AccB1I GGYRCC 1 cut(s) 9
AccI GTMKAC 1 cut(s) 399
AciI CCGC 6 cut(s) 115, 229, 271, 297, 1662, 1942
AclI AACGTT 1 cut(s) 905
AclWI GGATC 6 cut(s) 253, 750, 1255, 1268, 1316, 1376
AcoI YGGCCR 1 cut(s) 608
AcsI RAATTY 2 cut(s) 533, 561
AcuI CTGAAG 3 cut(s) 122, 1116, 1382
AcyI GRCGYC 1 cut(s) 1308
AfaI GTAC 6 cut(s) 5, 11, 465, 980, 1201, 1612
AfiI CCNNNNNNNGG 3 cut(s) 1118, 1163, 2053
AflIII ACRYGT 2 cut(s) 1382, 2062
AgeI ACCGGT 1 cut(s) 6
AhlI ACTAGT 3 cut(s) 964, 1988, 2020
AjnI CCWGG 6 cut(s) 183, 1116, 1177, 1524, 1632, 1936
AleI CACNNNNGTG 1 cut(s) 882
AloI GAACNNNNNNTCC 2 cut(s) 1158, 1190
AluBI AGCT 9 cut(s) 213, 354, 394, 599, 768, 1030, 1460, 1789, 2009
AluI AGCT 9 cut(s) 213, 354, 394, 599, 768, 1030, 1460, 1789, 2009
Alw26I GTCTC 3 cut(s) 322, 464, 1860
AlwI GGATC 6 cut(s) 253, 750, 1255, 1268, 1316, 1376
AlwNI CAGNNNCTG 1 cut(s) 1123
AoxI GGCC 3 cut(s) 608, 787, 1939
ApeKI GCWGC 1 cut(s) 1844
ApoI RAATTY 2 cut(s) 533, 561
AsiGI ACCGGT 1 cut(s) 6
Asp700I GAANNNNTTC 2 cut(s) 105, 1277
Asp718I GGTACC 1 cut(s) 9
AspS9I GGNCC 3 cut(s) 313, 1376, 1667
AsuC2I CCSGG 1 cut(s) 1644
AsuHPI GGTGA 3 cut(s) 311, 1648, 1813
AvaII GGWCC 3 cut(s) 313, 1376, 1667
BalI TGGCCA 1 cut(s) 610
BamHI GGATCC 1 cut(s) 1260
BanI GGYRCC 1 cut(s) 9
BanII GRGCYC 1 cut(s) 801
BarI GAAGNNNNNNTAC 2 cut(s) 383, 415
BbsI GAAGAC 1 cut(s) 662
BbvI GCAGC 1 cut(s) 1856
BccI CCATC 4 cut(s) 256, 551, 1121, 1795
BceAI ACGGC 1 cut(s) 1405
BciT130I CCWGG 6 cut(s) 185, 1118, 1179, 1526, 1634, 1938
BclI TGATCA 1 cut(s) 1023
BcnI CCSGG 1 cut(s) 1644
BcoDI GTCTC 3 cut(s) 322, 464, 1860
BcuI ACTAGT 3 cut(s) 964, 1988, 2020
BfaI CTAG 6 cut(s) 194, 323, 467, 965, 1989, 2021
BfmI CTRYAG 1 cut(s) 1882
BfuAI ACCTGC 1 cut(s) 1745
BglII AGATCT 1 cut(s) 829
BisI GCNGC 2 cut(s) 1845, 1942
BlsI GCNGC 2 cut(s) 1846, 1943
BmcAI AGTACT 2 cut(s) 465, 980
Bme1390I CCNGG 7 cut(s) 185, 1118, 1179, 1526, 1634, 1644, 1938
Bme18I GGWCC 3 cut(s) 313, 1376, 1667
BmgT120I GGNCC 3 cut(s) 313, 1376, 1667
BmiI GGNNCC 3 cut(s) 11, 315, 1262
BmrFI CCNGG 7 cut(s) 185, 1118, 1179, 1526, 1634, 1644, 1938
BmsI GCATC 8 cut(s) 36, 171, 250, 685, 700, 1062, 1095, 1629
BpiI GAAGAC 1 cut(s) 662
BpuEI CTTGAG 1 cut(s) 235
BpuMI CCSGG 1 cut(s) 1644
Bsa29I ATCGAT 3 cut(s) 574, 914, 1450
BsaHI GRCGYC 1 cut(s) 1308
BsaI GGTCTC 1 cut(s) 1860
BsaJI CCNNGG 5 cut(s) 891, 1056, 1117, 1178, 1264
BsaWI WCCGGW 2 cut(s) 6, 485
Bsc4I CCNNNNNNNGG 3 cut(s) 1118, 1163, 2053
Bse118I RCCGGY 1 cut(s) 6
Bse1I ACTGG 3 cut(s) 94, 986, 1915
Bse3DI GCAATG 2 cut(s) 676, 1866
BseBI CCWGG 6 cut(s) 185, 1118, 1179, 1526, 1634, 1938
BseCI ATCGAT 3 cut(s) 574, 914, 1450
BseDI CCNNGG 5 cut(s) 891, 1056, 1117, 1178, 1264
BseGI GGATG 4 cut(s) 51, 877, 1077, 1113
BseLI CCNNNNNNNGG 3 cut(s) 1118, 1163, 2053
BseMI GCAATG 2 cut(s) 676, 1866
BseMII CTCAG 2 cut(s) 47, 760
BseNI ACTGG 3 cut(s) 94, 986, 1915
BseXI GCAGC 1 cut(s) 1856
BseYI CCCAGC 1 cut(s) 1998
BsgI GTGCAG 4 cut(s) 634, 844, 1221, 1773
BshFI GGCC 3 cut(s) 610, 789, 1941
BshNI GGYRCC 1 cut(s) 9
BshTI ACCGGT 1 cut(s) 6
BshVI ATCGAT 3 cut(s) 574, 914, 1450
BsiSI CCGG 3 cut(s) 7, 486, 1643
BslFI GGGAC 3 cut(s) 299, 943, 1134
BslI CCNNNNNNNGG 3 cut(s) 1118, 1163, 2053
BsmAI GTCTC 3 cut(s) 322, 464, 1860
BsmFI GGGAC 3 cut(s) 299, 943, 1134
BsmI GAATGC 2 cut(s) 1392, 2028
BsnI GGCC 3 cut(s) 610, 789, 1941
Bso31I GGTCTC 1 cut(s) 1860
Bsp1286I GDGCHC 1 cut(s) 801
Bsp1407I TGTACA 1 cut(s) 1610
Bsp143I GATC 9 cut(s) 258, 265, 742, 829, 1023, 1260, 1321, 1368, 2110
Bsp19I CCATGG 1 cut(s) 1056
BspACI CCGC 6 cut(s) 115, 229, 271, 297, 1662, 1942
BspANI GGCC 3 cut(s) 610, 789, 1941
BspCNI CTCAG 2 cut(s) 48, 759
BspDI ATCGAT 3 cut(s) 574, 914, 1450
BspLI GGNNCC 3 cut(s) 11, 315, 1262
BspMAI CTGCAG 1 cut(s) 1886
BspMI ACCTGC 1 cut(s) 1745
BspPI GGATC 6 cut(s) 253, 750, 1255, 1268, 1316, 1376
BspT107I GGYRCC 1 cut(s) 9
BspTNI GGTCTC 1 cut(s) 1860
BsrDI GCAATG 2 cut(s) 676, 1866
BsrFI RCCGGY 1 cut(s) 6
BsrGI TGTACA 1 cut(s) 1610
BsrI ACTGG 3 cut(s) 94, 986, 1915
BssAI RCCGGY 1 cut(s) 6
BssECI CCNNGG 5 cut(s) 891, 1056, 1117, 1178, 1264
BssMI GATC 9 cut(s) 258, 265, 742, 829, 1023, 1260, 1321, 1368, 2110
BssNAI GTATAC 1 cut(s) 400
BssNI GRCGYC 1 cut(s) 1308
BssT1I CCWWGG 2 cut(s) 891, 1056
Bst1107I GTATAC 1 cut(s) 400
Bst2UI CCWGG 6 cut(s) 185, 1118, 1179, 1526, 1634, 1938
Bst4CI ACNGT 5 cut(s) 1125, 1231, 1477, 1483, 1689
BstACI GRCGYC 1 cut(s) 1308
BstAUI TGTACA 1 cut(s) 1610
BstC8I GCNNGC 3 cut(s) 134, 1236, 1462
BstDEI CTNAG 4 cut(s) 56, 385, 746, 791
BstDSI CCRYGG 1 cut(s) 1056
BstEII GGTNACC 1 cut(s) 849
BstF5I GGATG 4 cut(s) 51, 877, 1077, 1113
BstKTI GATC 9 cut(s) 261, 268, 745, 832, 1026, 1263, 1324, 1371, 2113
BstMAI GTCTC 3 cut(s) 322, 464, 1860
BstMBI GATC 9 cut(s) 258, 265, 742, 829, 1023, 1260, 1321, 1368, 2110
BstMWI GCNNNNNNNGC 4 cut(s) 947, 1398, 1786, 1938
BstNI CCWGG 6 cut(s) 185, 1118, 1179, 1526, 1634, 1938
BstNSI RCATGY 2 cut(s) 1386, 2066
BstPI GGTNACC 1 cut(s) 849
BstSCI CCNGG 7 cut(s) 183, 1116, 1177, 1524, 1632, 1642, 1936
BstSFI CTRYAG 1 cut(s) 1882
BstV1I GCAGC 1 cut(s) 1856
BstV2I GAAGAC 1 cut(s) 662
BstX2I RGATCY 5 cut(s) 258, 742, 829, 1260, 1368
BstYI RGATCY 5 cut(s) 258, 742, 829, 1260, 1368
BstZ17I GTATAC 1 cut(s) 400
Bsu15I ATCGAT 3 cut(s) 574, 914, 1450
BsuRI GGCC 3 cut(s) 610, 789, 1941
BsuTUI ATCGAT 3 cut(s) 574, 914, 1450
BtgI CCRYGG 1 cut(s) 1056
BtgZI GCGATG 1 cut(s) 1479
BtsCI GGATG 4 cut(s) 51, 877, 1077, 1113
BveI ACCTGC 1 cut(s) 1745
Cac8I GCNNGC 3 cut(s) 134, 1236, 1462
CaiI CAGNNNCTG 1 cut(s) 1123
Cfr10I RCCGGY 1 cut(s) 6
Cfr13I GGNCC 3 cut(s) 313, 1376, 1667
ClaI ATCGAT 3 cut(s) 574, 914, 1450
CsiI ACCWGGT 1 cut(s) 1632
Csp6I GTAC 6 cut(s) 4, 10, 464, 979, 1200, 1611
CspAI ACCGGT 1 cut(s) 6
CviAII CATG 8 cut(s) 281, 368, 409, 606, 1057, 1383, 1535, 2063
CviQI GTAC 6 cut(s) 4, 10, 464, 979, 1200, 1611
DdeI CTNAG 4 cut(s) 56, 385, 746, 791
DpnI GATC 9 cut(s) 260, 267, 744, 831, 1025, 1262, 1323, 1370, 2112
DpnII GATC 9 cut(s) 258, 265, 742, 829, 1023, 1260, 1321, 1368, 2110
EaeI YGGCCR 1 cut(s) 608
EciI GGCGGA 1 cut(s) 260
Eco130I CCWWGG 2 cut(s) 891, 1056
Eco147I AGGCCT 1 cut(s) 789
Eco24I GRGCYC 1 cut(s) 801
Eco31I GGTCTC 1 cut(s) 1860
Eco32I GATATC 1 cut(s) 918
Eco47I GGWCC 3 cut(s) 313, 1376, 1667
Eco57I CTGAAG 3 cut(s) 122, 1116, 1382
Eco91I GGTNACC 1 cut(s) 849
EcoO65I GGTNACC 1 cut(s) 849
EcoRII CCWGG 6 cut(s) 183, 1116, 1177, 1524, 1632, 1936
EcoRV GATATC 1 cut(s) 918
EcoT14I CCWWGG 2 cut(s) 891, 1056
EcoT22I ATGCAT 1 cut(s) 37
EcoT38I GRGCYC 1 cut(s) 801
ErhI CCWWGG 2 cut(s) 891, 1056
FaeI CATG 8 cut(s) 284, 371, 412, 609, 1060, 1386, 1538, 2066
FaqI GGGAC 3 cut(s) 299, 943, 1134
FatI CATG 8 cut(s) 280, 367, 408, 605, 1056, 1382, 1534, 2062
FauI CCCGC 1 cut(s) 222
FbaI TGATCA 1 cut(s) 1023
FblI GTMKAC 1 cut(s) 399
Fnu4HI GCNGC 2 cut(s) 1845, 1942
FokI GGATG 4 cut(s) 58, 884, 1084, 1100
FriOI GRGCYC 1 cut(s) 801
Fsp4HI GCNGC 2 cut(s) 1845, 1942
FspBI CTAG 6 cut(s) 194, 323, 467, 965, 1989, 2021
GluI GCNGC 2 cut(s) 1845, 1942
GsaI CCCAGC 1 cut(s) 2002
HaeIII GGCC 3 cut(s) 610, 789, 1941
HapII CCGG 3 cut(s) 7, 486, 1643
Hin1I GRCGYC 1 cut(s) 1308
Hin1II CATG 8 cut(s) 284, 371, 412, 609, 1060, 1386, 1538, 2066
HincII GTYRAC 2 cut(s) 718, 1306
HindII GTYRAC 2 cut(s) 718, 1306
HindIII AAGCTT 3 cut(s) 352, 1028, 1787
HinfI GANTC 8 cut(s) 152, 371, 602, 887, 932, 1052, 1338, 1739
HpaI GTTAAC 1 cut(s) 718
HpaII CCGG 3 cut(s) 7, 486, 1643
HphI GGTGA 3 cut(s) 311, 1648, 1813
Hpy166II GTNNAC 6 cut(s) 400, 718, 877, 1306, 1667, 1836
Hpy188I TCNGA 9 cut(s) 540, 691, 709, 785, 1265, 1362, 1624, 1744, 2122
Hpy188III TCNNGA 6 cut(s) 194, 323, 548, 1504, 1580, 2108
Hpy8I GTNNAC 6 cut(s) 400, 718, 877, 1306, 1667, 1836
Hpy99I CGWCG 1 cut(s) 1175
HpyAV CCTTC 6 cut(s) 714, 727, 1538, 1949, 1953, 2057
HpyCH4III ACNGT 5 cut(s) 1125, 1231, 1477, 1483, 1689
HpyCH4IV ACGT 6 cut(s) 905, 1173, 1213, 1308, 1593, 1838
HpyF10VI GCNNNNNNNGC 4 cut(s) 947, 1398, 1786, 1938
HpyF3I CTNAG 4 cut(s) 56, 385, 746, 791
HpySE526I ACGT 6 cut(s) 905, 1173, 1213, 1308, 1593, 1838
Hsp92I GRCGYC 1 cut(s) 1308
Hsp92II CATG 8 cut(s) 284, 371, 412, 609, 1060, 1386, 1538, 2066
KpnI GGTACC 1 cut(s) 13
Ksp22I TGATCA 1 cut(s) 1023
KspAI GTTAAC 1 cut(s) 718
Kzo9I GATC 9 cut(s) 258, 265, 742, 829, 1023, 1260, 1321, 1368, 2110
Lsp1109I GCAGC 1 cut(s) 1856
LweI GCATC 8 cut(s) 36, 171, 250, 685, 700, 1062, 1095, 1629
MabI ACCWGGT 1 cut(s) 1632
MaeI CTAG 6 cut(s) 194, 323, 467, 965, 1989, 2021
MaeII ACGT 6 cut(s) 905, 1173, 1213, 1308, 1593, 1838
MalI GATC 9 cut(s) 260, 267, 744, 831, 1025, 1262, 1323, 1370, 2112
MboI GATC 9 cut(s) 258, 265, 742, 829, 1023, 1260, 1321, 1368, 2110
MboII GAAGA 8 cut(s) 113, 236, 268, 353, 538, 662, 1145, 1270
MflI RGATCY 5 cut(s) 258, 742, 829, 1260, 1368
MhlI GDGCHC 1 cut(s) 801
MlsI TGGCCA 1 cut(s) 610
MluCI AATT 8 cut(s) 533, 561, 759, 802, 1332, 1625, 1774, 1977
MluNI TGGCCA 1 cut(s) 610
MlyI GAGTC 2 cut(s) 941, 1347
MmeI TCCRAC 2 cut(s) 91, 358
MnlI CCTC 6 cut(s) 405, 511, 779, 788, 1259, 1667
Mox20I TGGCCA 1 cut(s) 610
Mph1103I ATGCAT 1 cut(s) 37
MroXI GAANNNNTTC 2 cut(s) 105, 1277
MscI TGGCCA 1 cut(s) 610
MseI TTAA 5 cut(s) 665, 717, 1427, 1980, 1994
MslI CAYNNNNRTG 4 cut(s) 279, 452, 882, 1070
Msp20I TGGCCA 1 cut(s) 610
MspI CCGG 3 cut(s) 7, 486, 1643
MspR9I CCNGG 7 cut(s) 185, 1118, 1179, 1526, 1634, 1644, 1938
Mva1269I GAATGC 2 cut(s) 1392, 2028
MvaI CCWGG 6 cut(s) 185, 1118, 1179, 1526, 1634, 1938
MwoI GCNNNNNNNGC 4 cut(s) 947, 1398, 1786, 1938
NciI CCSGG 1 cut(s) 1644
NcoI CCATGG 1 cut(s) 1056
NdeII GATC 9 cut(s) 258, 265, 742, 829, 1023, 1260, 1321, 1368, 2110
NlaIII CATG 8 cut(s) 284, 371, 412, 609, 1060, 1386, 1538, 2066
NlaIV GGNNCC 3 cut(s) 11, 315, 1262
NmuCI GTSAC 5 cut(s) 299, 580, 1099, 1689, 1819
NsiI ATGCAT 1 cut(s) 37
NspI RCATGY 2 cut(s) 1386, 2066
OliI CACNNNNGTG 1 cut(s) 882
PaqCI CACCTGC 1 cut(s) 1745
PceI AGGCCT 1 cut(s) 789
PciI ACATGT 2 cut(s) 1382, 2062
PcsI WCGNNNNNNNCGW 2 cut(s) 911, 1305
PctI GAATGC 2 cut(s) 1392, 2028
PdmI GAANNNNTTC 2 cut(s) 105, 1277
PfeI GAWTC 6 cut(s) 152, 371, 602, 887, 1052, 1739
PinAI ACCGGT 1 cut(s) 6
PkrI GCNGC 2 cut(s) 1846, 1943
PleI GAGTC 2 cut(s) 940, 1346
PpsI GAGTC 2 cut(s) 940, 1346
PscI ACATGT 2 cut(s) 1382, 2062
Psp1406I AACGTT 1 cut(s) 905
Psp6I CCWGG 6 cut(s) 183, 1116, 1177, 1524, 1632, 1936
PspEI GGTNACC 1 cut(s) 849
PspFI CCCAGC 1 cut(s) 1998
PspGI CCWGG 6 cut(s) 183, 1116, 1177, 1524, 1632, 1936
PspN4I GGNNCC 3 cut(s) 11, 315, 1262
PspPI GGNCC 3 cut(s) 313, 1376, 1667
PstI CTGCAG 1 cut(s) 1886
PstNI CAGNNNCTG 1 cut(s) 1123
PsuI RGATCY 5 cut(s) 258, 742, 829, 1260, 1368
RsaI GTAC 6 cut(s) 5, 11, 465, 980, 1201, 1612
RsaNI GTAC 6 cut(s) 4, 10, 464, 979, 1200, 1611
RseI CAYNNNNRTG 4 cut(s) 279, 452, 882, 1070
SaqAI TTAA 5 cut(s) 665, 717, 1427, 1980, 1994
SatI GCNGC 2 cut(s) 1845, 1942
Sau3AI GATC 9 cut(s) 258, 265, 742, 829, 1023, 1260, 1321, 1368, 2110
Sau96I GGNCC 3 cut(s) 313, 1376, 1667
ScaI AGTACT 2 cut(s) 465, 980
SchI GAGTC 2 cut(s) 941, 1347
ScrFI CCNGG 7 cut(s) 185, 1118, 1179, 1526, 1634, 1644, 1938
SduI GDGCHC 1 cut(s) 801
SexAI ACCWGGT 1 cut(s) 1632
SfaNI GCATC 8 cut(s) 36, 171, 250, 685, 700, 1062, 1095, 1629
SfcI CTRYAG 1 cut(s) 1882
SinI GGWCC 3 cut(s) 313, 1376, 1667
SmiMI CAYNNNNRTG 4 cut(s) 279, 452, 882, 1070
SmlI CTYRAG 1 cut(s) 214
SmoI CTYRAG 1 cut(s) 214
SpeI ACTAGT 3 cut(s) 964, 1988, 2020
Sse9I AATT 8 cut(s) 533, 561, 759, 802, 1332, 1625, 1774, 1977
SseBI AGGCCT 1 cut(s) 789
SsiI CCGC 6 cut(s) 115, 229, 271, 297, 1662, 1942
SspI AATATT 1 cut(s) 1607
SspMI CTAG 6 cut(s) 194, 323, 467, 965, 1989, 2021
StuI AGGCCT 1 cut(s) 789
StyD4I CCNGG 7 cut(s) 183, 1116, 1177, 1524, 1632, 1642, 1936
StyI CCWWGG 2 cut(s) 891, 1056
TaaI ACNGT 5 cut(s) 1125, 1231, 1477, 1483, 1689
TaiI ACGT 6 cut(s) 908, 1176, 1216, 1311, 1596, 1841
TaqI TCGA 3 cut(s) 574, 914, 1450
TaqII GACCGA 1 cut(s) 1884
TasI AATT 8 cut(s) 533, 561, 759, 802, 1332, 1625, 1774, 1977
TatI WGTACW 4 cut(s) 463, 978, 1199, 1610
TauI GCSGC 1 cut(s) 1944
TfiI GAWTC 6 cut(s) 152, 371, 602, 887, 1052, 1739
Tru1I TTAA 5 cut(s) 665, 717, 1427, 1980, 1994
Tru9I TTAA 5 cut(s) 665, 717, 1427, 1980, 1994
TseFI GTSAC 5 cut(s) 299, 580, 1099, 1689, 1819
TseI GCWGC 1 cut(s) 1844
Tsp45I GTSAC 5 cut(s) 299, 580, 1099, 1689, 1819
TspDTI ATGAA 7 cut(s) 384, 545, 650, 1143, 1422, 1482, 1761
VpaK11BI GGWCC 3 cut(s) 313, 1376, 1667
XapI RAATTY 2 cut(s) 533, 561
XbaI TCTAGA 2 cut(s) 193, 322
XceI RCATGY 2 cut(s) 1386, 2066
XcmI CCANNNNNNNNNTGG 2 cut(s) 374, 1006
XmiI GTMKAC 1 cut(s) 399
XmnI GAANNNNTTC 2 cut(s) 105, 1277
XspI CTAG 6 cut(s) 194, 323, 467, 965, 1989, 2021
ZraI GACGTC 1 cut(s) 1309
ZrmI AGTACT 2 cut(s) 465, 980
Zsp2I ATGCAT 1 cut(s) 37
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.