No description available
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| WHD_ROQ1 | PF23282 | 130 - 200 | 3.8e-20 | Disease resistance protein Roq1-like, winged-helix domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 999 |
| AclWI | GGATC | 3 cut(s) | 189, 982, 1792 |
| AcoI | YGGCCR | 1 cut(s) | 175 |
| AcsI | RAATTY | 2 cut(s) | 869, 1290 |
| AcuI | CTGAAG | 1 cut(s) | 1382 |
| AcyI | GRCGYC | 1 cut(s) | 996 |
| AfaI | GTAC | 8 cut(s) | 21, 225, 307, 673, 810, 1130, 1551, 1631 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 194 |
| AflII | CTTAAG | 1 cut(s) | 157 |
| AflIII | ACRYGT | 3 cut(s) | 292, 805, 1176 |
| AgeI | ACCGGT | 1 cut(s) | 1804 |
| AgsI | TTSAA | 7 cut(s) | 194, 497, 686, 885, 926, 985, 1135 |
| AjnI | CCWGG | 5 cut(s) | 46, 177, 1113, 1506, 1809 |
| AluBI | AGCT | 5 cut(s) | 154, 251, 366, 633, 1754 |
| AluI | AGCT | 5 cut(s) | 154, 251, 366, 633, 1754 |
| Alw21I | GWGCWC | 2 cut(s) | 156, 635 |
| Alw26I | GTCTC | 3 cut(s) | 473, 940, 1114 |
| AlwI | GGATC | 3 cut(s) | 189, 982, 1792 |
| AoxI | GGCC | 4 cut(s) | 175, 1012, 1081, 1301 |
| ApoI | RAATTY | 2 cut(s) | 869, 1290 |
| AsiGI | ACCGGT | 1 cut(s) | 1804 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 401, 585, 1062 |
| AspLEI | GCGC | 1 cut(s) | 1818 |
| AspS9I | GGNCC | 3 cut(s) | 4, 125, 1807 |
| AsuHPI | GGTGA | 3 cut(s) | 152, 350, 532 |
| AsuII | TTCGAA | 2 cut(s) | 648, 1759 |
| AvaII | GGWCC | 3 cut(s) | 4, 125, 1807 |
| BalI | TGGCCA | 1 cut(s) | 177 |
| BanII | GRGCYC | 2 cut(s) | 156, 635 |
| BbsI | GAAGAC | 1 cut(s) | 244 |
| Bbv12I | GWGCWC | 2 cut(s) | 156, 635 |
| BccI | CCATC | 5 cut(s) | 458, 846, 1255, 1280, 1433 |
| BciT130I | CCWGG | 5 cut(s) | 48, 179, 1115, 1508, 1811 |
| BcoDI | GTCTC | 3 cut(s) | 473, 940, 1114 |
| BfaI | CTAG | 5 cut(s) | 72, 461, 1052, 1623, 1655 |
| BfrI | CTTAAG | 1 cut(s) | 157 |
| BglII | AGATCT | 1 cut(s) | 1619 |
| BmcAI | AGTACT | 1 cut(s) | 21 |
| Bme1390I | CCNGG | 5 cut(s) | 48, 179, 1115, 1508, 1811 |
| Bme18I | GGWCC | 3 cut(s) | 4, 125, 1807 |
| BmgT120I | GGNCC | 3 cut(s) | 4, 125, 1807 |
| BmiI | GGNNCC | 1 cut(s) | 285 |
| BmrFI | CCNGG | 5 cut(s) | 48, 179, 1115, 1508, 1811 |
| BmsI | GCATC | 3 cut(s) | 4, 765, 1152 |
| BpiI | GAAGAC | 1 cut(s) | 244 |
| BpmI | CTGGAG | 1 cut(s) | 1136 |
| Bpu14I | TTCGAA | 2 cut(s) | 648, 1759 |
| BpuEI | CTTGAG | 2 cut(s) | 964, 1345 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1443 |
| BsaHI | GRCGYC | 1 cut(s) | 996 |
| BsaJI | CCNNGG | 1 cut(s) | 1009 |
| BsaWI | WCCGGW | 1 cut(s) | 1804 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1250, 1280 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 194 |
| Bse118I | RCCGGY | 2 cut(s) | 1079, 1804 |
| Bse1I | ACTGG | 3 cut(s) | 819, 1241, 1463 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1443 |
| BseBI | CCWGG | 5 cut(s) | 48, 179, 1115, 1508, 1811 |
| BseDI | CCNNGG | 1 cut(s) | 1009 |
| BseGI | GGATG | 6 cut(s) | 184, 473, 780, 827, 1167, 1768 |
| BseJI | GATNNNNATC | 1 cut(s) | 1443 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 194 |
| BseMII | CTCAG | 3 cut(s) | 14, 204, 600 |
| BseNI | ACTGG | 3 cut(s) | 819, 1241, 1463 |
| BshFI | GGCC | 4 cut(s) | 177, 1014, 1083, 1303 |
| BshTI | ACCGGT | 1 cut(s) | 1804 |
| BsiHKAI | GWGCWC | 2 cut(s) | 156, 635 |
| BsiSI | CCGG | 2 cut(s) | 1080, 1805 |
| BslFI | GGGAC | 2 cut(s) | 548, 588 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 194 |
| BsmAI | GTCTC | 3 cut(s) | 473, 940, 1114 |
| BsmFI | GGGAC | 2 cut(s) | 548, 588 |
| BsmI | GAATGC | 1 cut(s) | 492 |
| BsnI | GGCC | 4 cut(s) | 177, 1014, 1083, 1303 |
| Bsp119I | TTCGAA | 2 cut(s) | 648, 1759 |
| Bsp1286I | GDGCHC | 2 cut(s) | 156, 635 |
| Bsp143I | GATC | 8 cut(s) | 34, 181, 508, 987, 1492, 1619, 1680, 1797 |
| Bsp19I | CCATGG | 1 cut(s) | 1009 |
| BspANI | GGCC | 4 cut(s) | 177, 1014, 1083, 1303 |
| BspCNI | CTCAG | 3 cut(s) | 15, 205, 601 |
| BspHI | TCATGA | 2 cut(s) | 345, 1096 |
| BspLI | GGNNCC | 1 cut(s) | 285 |
| BspPI | GGATC | 3 cut(s) | 189, 982, 1792 |
| BspT104I | TTCGAA | 2 cut(s) | 648, 1759 |
| BspTI | CTTAAG | 1 cut(s) | 157 |
| BsrFI | RCCGGY | 2 cut(s) | 1079, 1804 |
| BsrI | ACTGG | 3 cut(s) | 819, 1241, 1463 |
| BssAI | RCCGGY | 2 cut(s) | 1079, 1804 |
| BssECI | CCNNGG | 1 cut(s) | 1009 |
| BssMI | GATC | 8 cut(s) | 34, 181, 508, 987, 1492, 1619, 1680, 1797 |
| BssNI | GRCGYC | 1 cut(s) | 996 |
| BssT1I | CCWWGG | 1 cut(s) | 1009 |
| Bst2UI | CCWGG | 5 cut(s) | 48, 179, 1115, 1508, 1811 |
| Bst4CI | ACNGT | 3 cut(s) | 112, 233, 310 |
| BstACI | GRCGYC | 1 cut(s) | 996 |
| BstAFI | CTTAAG | 1 cut(s) | 157 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 712 |
| BstBI | TTCGAA | 2 cut(s) | 648, 1759 |
| BstC8I | GCNNGC | 5 cut(s) | 678, 704, 863, 1184, 1752 |
| BstDEI | CTNAG | 6 cut(s) | 23, 213, 609, 636, 800, 1157 |
| BstDSI | CCRYGG | 1 cut(s) | 1009 |
| BstF5I | GGATG | 6 cut(s) | 184, 473, 780, 827, 1167, 1768 |
| BstHHI | GCGC | 1 cut(s) | 1818 |
| BstKTI | GATC | 8 cut(s) | 37, 184, 511, 990, 1495, 1622, 1683, 1800 |
| BstMAI | GTCTC | 3 cut(s) | 473, 940, 1114 |
| BstMBI | GATC | 8 cut(s) | 34, 181, 508, 987, 1492, 1619, 1680, 1797 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 712, 1528 |
| BstNI | CCWGG | 5 cut(s) | 48, 179, 1115, 1508, 1811 |
| BstNSI | RCATGY | 5 cut(s) | 170, 706, 809, 1180, 1186 |
| BstSCI | CCNGG | 5 cut(s) | 46, 177, 1113, 1506, 1809 |
| BstV2I | GAAGAC | 1 cut(s) | 244 |
| BstX2I | RGATCY | 3 cut(s) | 987, 1619, 1797 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1010 |
| BstYI | RGATCY | 3 cut(s) | 987, 1619, 1797 |
| BsuRI | GGCC | 4 cut(s) | 177, 1014, 1083, 1303 |
| BtgI | CCRYGG | 1 cut(s) | 1009 |
| BtsCI | GGATG | 6 cut(s) | 184, 473, 780, 827, 1167, 1768 |
| BtsIMutI | CAGTG | 3 cut(s) | 238, 315, 1248 |
| Cac8I | GCNNGC | 5 cut(s) | 678, 704, 863, 1184, 1752 |
| CciI | TCATGA | 2 cut(s) | 345, 1096 |
| CfoI | GCGC | 1 cut(s) | 1818 |
| Cfr10I | RCCGGY | 2 cut(s) | 1079, 1804 |
| Cfr13I | GGNCC | 3 cut(s) | 4, 125, 1807 |
| Csp6I | GTAC | 8 cut(s) | 20, 224, 306, 672, 809, 1129, 1550, 1630 |
| CspAI | ACCGGT | 1 cut(s) | 1804 |
| CviQI | GTAC | 8 cut(s) | 20, 224, 306, 672, 809, 1129, 1550, 1630 |
| DdeI | CTNAG | 6 cut(s) | 23, 213, 609, 636, 800, 1157 |
| DpnI | GATC | 8 cut(s) | 36, 183, 510, 989, 1494, 1621, 1682, 1799 |
| DpnII | GATC | 8 cut(s) | 34, 181, 508, 987, 1492, 1619, 1680, 1797 |
| EaeI | YGGCCR | 1 cut(s) | 175 |
| Ecl136II | GAGCTC | 2 cut(s) | 154, 633 |
| Eco130I | CCWWGG | 1 cut(s) | 1009 |
| Eco24I | GRGCYC | 2 cut(s) | 156, 635 |
| Eco47I | GGWCC | 3 cut(s) | 4, 125, 1807 |
| Eco53kI | GAGCTC | 2 cut(s) | 154, 633 |
| Eco57I | CTGAAG | 1 cut(s) | 1382 |
| EcoICRI | GAGCTC | 2 cut(s) | 154, 633 |
| EcoRI | GAATTC | 1 cut(s) | 1290 |
| EcoRII | CCWGG | 5 cut(s) | 46, 177, 1113, 1506, 1809 |
| EcoT14I | CCWWGG | 1 cut(s) | 1009 |
| EcoT22I | ATGCAT | 3 cut(s) | 555, 708, 1580 |
| EcoT38I | GRGCYC | 2 cut(s) | 156, 635 |
| ErhI | CCWWGG | 1 cut(s) | 1009 |
| FaqI | GGGAC | 2 cut(s) | 548, 588 |
| FauNDI | CATATG | 1 cut(s) | 601 |
| FokI | GGATG | 6 cut(s) | 171, 480, 787, 834, 1174, 1755 |
| FriOI | GRGCYC | 2 cut(s) | 156, 635 |
| FspBI | CTAG | 5 cut(s) | 72, 461, 1052, 1623, 1655 |
| GlaI | GCGC | 1 cut(s) | 1817 |
| GsuI | CTGGAG | 1 cut(s) | 1136 |
| HaeIII | GGCC | 4 cut(s) | 177, 1014, 1083, 1303 |
| HapII | CCGG | 2 cut(s) | 1080, 1805 |
| HhaI | GCGC | 1 cut(s) | 1818 |
| Hin1I | GRCGYC | 1 cut(s) | 996 |
| Hin6I | GCGC | 1 cut(s) | 1816 |
| HinP1I | GCGC | 1 cut(s) | 1816 |
| HpaII | CCGG | 2 cut(s) | 1080, 1805 |
| HphI | GGTGA | 3 cut(s) | 152, 350, 532 |
| Hpy166II | GTNNAC | 1 cut(s) | 1552 |
| Hpy188I | TCNGA | 5 cut(s) | 214, 455, 840, 1170, 1381 |
| Hpy188III | TCNNGA | 9 cut(s) | 346, 478, 566, 923, 1097, 1229, 1324, 1623, 1783 |
| Hpy8I | GTNNAC | 1 cut(s) | 1552 |
| HpyAV | CCTTC | 8 cut(s) | 95, 188, 680, 987, 1135, 1249, 1357, 1479 |
| HpyCH4III | ACNGT | 3 cut(s) | 112, 233, 310 |
| HpyCH4IV | ACGT | 3 cut(s) | 292, 996, 1628 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 712, 1528 |
| HpyF3I | CTNAG | 6 cut(s) | 23, 213, 609, 636, 800, 1157 |
| HpySE526I | ACGT | 3 cut(s) | 292, 996, 1628 |
| Hsp92I | GRCGYC | 1 cut(s) | 996 |
| HspAI | GCGC | 1 cut(s) | 1816 |
| Kzo9I | GATC | 8 cut(s) | 34, 181, 508, 987, 1492, 1619, 1680, 1797 |
| LmnI | GCTCC | 3 cut(s) | 151, 630, 1666 |
| LweI | GCATC | 3 cut(s) | 4, 765, 1152 |
| MaeI | CTAG | 5 cut(s) | 72, 461, 1052, 1623, 1655 |
| MaeII | ACGT | 3 cut(s) | 292, 996, 1628 |
| MaeIII | GTNAC | 3 cut(s) | 520, 566, 1640 |
| MalI | GATC | 8 cut(s) | 36, 183, 510, 989, 1494, 1621, 1682, 1799 |
| MboI | GATC | 8 cut(s) | 34, 181, 508, 987, 1492, 1619, 1680, 1797 |
| MboII | GAAGA | 8 cut(s) | 249, 261, 452, 965, 997, 1183, 1595, 1629 |
| MfeI | CAATTG | 2 cut(s) | 525, 681 |
| MflI | RGATCY | 3 cut(s) | 987, 1619, 1797 |
| MhlI | GDGCHC | 2 cut(s) | 156, 635 |
| MlsI | TGGCCA | 1 cut(s) | 177 |
| MluNI | TGGCCA | 1 cut(s) | 177 |
| MlyI | GAGTC | 2 cut(s) | 365, 1116 |
| MmeI | TCCRAC | 3 cut(s) | 103, 863, 1825 |
| MnlI | CCTC | 4 cut(s) | 208, 416, 1048, 1829 |
| Mox20I | TGGCCA | 1 cut(s) | 177 |
| Mph1103I | ATGCAT | 3 cut(s) | 555, 708, 1580 |
| MroXI | GAANNNNTTC | 3 cut(s) | 401, 585, 1062 |
| MscI | TGGCCA | 1 cut(s) | 177 |
| MslI | CAYNNNNRTG | 3 cut(s) | 1008, 1181, 1437 |
| Msp20I | TGGCCA | 1 cut(s) | 177 |
| MspA1I | CMGCKG | 1 cut(s) | 1754 |
| MspCI | CTTAAG | 1 cut(s) | 157 |
| MspI | CCGG | 2 cut(s) | 1080, 1805 |
| MspR9I | CCNGG | 5 cut(s) | 48, 179, 1115, 1508, 1811 |
| MunI | CAATTG | 2 cut(s) | 525, 681 |
| Mva1269I | GAATGC | 1 cut(s) | 492 |
| MvaI | CCWGG | 5 cut(s) | 48, 179, 1115, 1508, 1811 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 712, 1528 |
| NcoI | CCATGG | 1 cut(s) | 1009 |
| NdeI | CATATG | 1 cut(s) | 601 |
| NdeII | GATC | 8 cut(s) | 34, 181, 508, 987, 1492, 1619, 1680, 1797 |
| NlaIV | GGNNCC | 1 cut(s) | 285 |
| NmuCI | GTSAC | 2 cut(s) | 520, 566 |
| NsiI | ATGCAT | 3 cut(s) | 555, 708, 1580 |
| NspI | RCATGY | 5 cut(s) | 170, 706, 809, 1180, 1186 |
| NspV | TTCGAA | 2 cut(s) | 648, 1759 |
| PaeI | GCATGC | 2 cut(s) | 706, 1186 |
| PagI | TCATGA | 2 cut(s) | 345, 1096 |
| PciI | ACATGT | 2 cut(s) | 805, 1176 |
| PctI | GAATGC | 1 cut(s) | 492 |
| PdmI | GAANNNNTTC | 3 cut(s) | 401, 585, 1062 |
| PfoI | TCCNGGA | 2 cut(s) | 46, 1506 |
| PinAI | ACCGGT | 1 cut(s) | 1804 |
| PleI | GAGTC | 2 cut(s) | 365, 1116 |
| PpsI | GAGTC | 2 cut(s) | 365, 1116 |
| PscI | ACATGT | 2 cut(s) | 805, 1176 |
| Psp124BI | GAGCTC | 2 cut(s) | 156, 635 |
| Psp6I | CCWGG | 5 cut(s) | 46, 177, 1113, 1506, 1809 |
| PspGI | CCWGG | 5 cut(s) | 46, 177, 1113, 1506, 1809 |
| PspN4I | GGNNCC | 1 cut(s) | 285 |
| PspPI | GGNCC | 3 cut(s) | 4, 125, 1807 |
| PsuI | RGATCY | 3 cut(s) | 987, 1619, 1797 |
| PvuII | CAGCTG | 1 cut(s) | 1754 |
| RsaI | GTAC | 8 cut(s) | 21, 225, 307, 673, 810, 1130, 1551, 1631 |
| RsaNI | GTAC | 8 cut(s) | 20, 224, 306, 672, 809, 1129, 1550, 1630 |
| RseI | CAYNNNNRTG | 3 cut(s) | 1008, 1181, 1437 |
| SacI | GAGCTC | 2 cut(s) | 156, 635 |
| Sau3AI | GATC | 8 cut(s) | 34, 181, 508, 987, 1492, 1619, 1680, 1797 |
| Sau96I | GGNCC | 3 cut(s) | 4, 125, 1807 |
| ScaI | AGTACT | 1 cut(s) | 21 |
| SchI | GAGTC | 2 cut(s) | 365, 1116 |
| ScrFI | CCNGG | 5 cut(s) | 48, 179, 1115, 1508, 1811 |
| SduI | GDGCHC | 2 cut(s) | 156, 635 |
| SfaNI | GCATC | 3 cut(s) | 4, 765, 1152 |
| SfuI | TTCGAA | 2 cut(s) | 648, 1759 |
| SinI | GGWCC | 3 cut(s) | 4, 125, 1807 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 1008, 1181, 1437 |
| SmlI | CTYRAG | 3 cut(s) | 157, 943, 1324 |
| SmoI | CTYRAG | 3 cut(s) | 157, 943, 1324 |
| SphI | GCATGC | 2 cut(s) | 706, 1186 |
| SspI | AATATT | 1 cut(s) | 209 |
| SspMI | CTAG | 5 cut(s) | 72, 461, 1052, 1623, 1655 |
| SstI | GAGCTC | 2 cut(s) | 156, 635 |
| StyD4I | CCNGG | 5 cut(s) | 46, 177, 1113, 1506, 1809 |
| StyI | CCWWGG | 1 cut(s) | 1009 |
| TaaI | ACNGT | 3 cut(s) | 112, 233, 310 |
| TaiI | ACGT | 3 cut(s) | 295, 999, 1631 |
| TaqI | TCGA | 6 cut(s) | 477, 648, 1491, 1524, 1683, 1759 |
| TatI | WGTACW | 4 cut(s) | 19, 305, 1128, 1549 |
| TscAI | CASTG | 3 cut(s) | 238, 315, 1248 |
| TseFI | GTSAC | 2 cut(s) | 520, 566 |
| Tsp45I | GTSAC | 2 cut(s) | 520, 566 |
| TspGWI | ACGGA | 2 cut(s) | 834, 1412 |
| TspRI | CASTG | 3 cut(s) | 238, 315, 1248 |
| Vha464I | CTTAAG | 1 cut(s) | 157 |
| VpaK11BI | GGWCC | 3 cut(s) | 4, 125, 1807 |
| XapI | RAATTY | 2 cut(s) | 869, 1290 |
| XbaI | TCTAGA | 1 cut(s) | 1622 |
| XceI | RCATGY | 5 cut(s) | 170, 706, 809, 1180, 1186 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 170, 1111 |
| XmnI | GAANNNNTTC | 3 cut(s) | 401, 585, 1062 |
| XspI | CTAG | 5 cut(s) | 72, 461, 1052, 1623, 1655 |
| ZraI | GACGTC | 1 cut(s) | 997 |
| ZrmI | AGTACT | 1 cut(s) | 21 |
| Zsp2I | ATGCAT | 3 cut(s) | 555, 708, 1580 |