No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 4 cut(s) | 1586, 1713, 2087, 2357 |
| AatII | GACGTC | 1 cut(s) | 705 |
| Acc16I | TGCGCA | 1 cut(s) | 1167 |
| AccI | GTMKAC | 2 cut(s) | 78, 2014 |
| AccIII | TCCGGA | 1 cut(s) | 735 |
| AciI | CCGC | 1 cut(s) | 1644 |
| AclWI | GGATC | 4 cut(s) | 1252, 1776, 2005, 2481 |
| AcoI | YGGCCR | 3 cut(s) | 969, 1654, 2467 |
| AcyI | GRCGYC | 1 cut(s) | 702 |
| AfaI | GTAC | 6 cut(s) | 321, 1389, 1865, 2313, 2408, 2517 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 429, 1398, 1736, 2486 |
| AflIII | ACRYGT | 5 cut(s) | 148, 672, 1384, 1860, 2065 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1192 |
| AhlI | ACTAGT | 2 cut(s) | 1462, 1649 |
| AjiI | CACGTC | 1 cut(s) | 1861 |
| AjnI | CCWGG | 4 cut(s) | 1813, 2338, 2363, 2469 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 538, 570, 1619, 1651, 1665, 1697 |
| AluBI | AGCT | 8 cut(s) | 1124, 1757, 1768, 2091, 2253, 2446, 2611, 2658 |
| AluI | AGCT | 8 cut(s) | 1124, 1757, 1768, 2091, 2253, 2446, 2611, 2658 |
| Alw21I | GWGCWC | 3 cut(s) | 1301, 1531, 1621 |
| Alw26I | GTCTC | 3 cut(s) | 101, 932, 1899 |
| AlwI | GGATC | 4 cut(s) | 1252, 1776, 2005, 2481 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1287 |
| Ama87I | CYCGRG | 1 cut(s) | 1842 |
| Aor13HI | TCCGGA | 1 cut(s) | 735 |
| AoxI | GGCC | 4 cut(s) | 477, 969, 1654, 2467 |
| ApeKI | GCWGC | 1 cut(s) | 1754 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1950, 1982 |
| AseI | ATTAAT | 1 cut(s) | 243 |
| AspLEI | GCGC | 2 cut(s) | 1168, 2246 |
| AspS9I | GGNCC | 8 cut(s) | 444, 462, 542, 626, 1278, 1309, 2287, 2296 |
| AsuC2I | CCSGG | 2 cut(s) | 109, 1737 |
| AsuHPI | GGTGA | 7 cut(s) | 193, 646, 874, 2468, 2642, 2824, 2848 |
| AsuNHI | GCTAGC | 1 cut(s) | 1757 |
| AvaI | CYCGRG | 1 cut(s) | 1842 |
| AvaII | GGWCC | 8 cut(s) | 444, 462, 542, 626, 1278, 1309, 2287, 2296 |
| BalI | TGGCCA | 2 cut(s) | 971, 2469 |
| BbsI | GAAGAC | 1 cut(s) | 2054 |
| Bbv12I | GWGCWC | 3 cut(s) | 1301, 1531, 1621 |
| BbvI | GCAGC | 1 cut(s) | 1766 |
| BccI | CCATC | 4 cut(s) | 896, 1785, 1988, 2750 |
| BceAI | ACGGC | 1 cut(s) | 2845 |
| BciT130I | CCWGG | 4 cut(s) | 1815, 2340, 2365, 2471 |
| BclI | TGATCA | 1 cut(s) | 1533 |
| BcnI | CCSGG | 2 cut(s) | 109, 1737 |
| BcoDI | GTCTC | 3 cut(s) | 101, 932, 1899 |
| BcuI | ACTAGT | 2 cut(s) | 1462, 1649 |
| BfaI | CTAG | 6 cut(s) | 980, 1463, 1650, 1758, 2256, 2441 |
| BfoI | RGCGCY | 1 cut(s) | 2247 |
| BglII | AGATCT | 1 cut(s) | 168 |
| BisI | GCNGC | 1 cut(s) | 1755 |
| BlsI | GCNGC | 1 cut(s) | 1756 |
| BmcAI | AGTACT | 1 cut(s) | 2313 |
| Bme1390I | CCNGG | 6 cut(s) | 109, 1737, 1815, 2340, 2365, 2471 |
| Bme18I | GGWCC | 8 cut(s) | 444, 462, 542, 626, 1278, 1309, 2287, 2296 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1192 |
| BmeT110I | CYCGRG | 1 cut(s) | 1842 |
| BmgBI | CACGTC | 1 cut(s) | 1861 |
| BmgT120I | GGNCC | 8 cut(s) | 444, 462, 542, 626, 1278, 1309, 2287, 2296 |
| BmiI | GGNNCC | 3 cut(s) | 543, 627, 1819 |
| BmrFI | CCNGG | 6 cut(s) | 109, 1737, 1815, 2340, 2365, 2471 |
| BmrI | ACTGGG | 1 cut(s) | 1012 |
| BmsI | GCATC | 3 cut(s) | 333, 2296, 2795 |
| BmtI | GCTAGC | 1 cut(s) | 1761 |
| BmuI | ACTGGG | 1 cut(s) | 1012 |
| BpiI | GAAGAC | 1 cut(s) | 2054 |
| BpmI | CTGGAG | 2 cut(s) | 196, 645 |
| BpuEI | CTTGAG | 2 cut(s) | 1354, 1947 |
| BpuMI | CCSGG | 2 cut(s) | 109, 1737 |
| Bsa29I | ATCGAT | 1 cut(s) | 1780 |
| BsaBI | GATNNNNATC | 2 cut(s) | 1786, 1952 |
| BsaHI | GRCGYC | 1 cut(s) | 702 |
| BsaJI | CCNNGG | 1 cut(s) | 629 |
| BsaWI | WCCGGW | 1 cut(s) | 735 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 429, 1398, 1736, 2486 |
| Bse1I | ACTGG | 1 cut(s) | 1018 |
| Bse3DI | GCAATG | 4 cut(s) | 1175, 1756, 2055, 2703 |
| Bse8I | GATNNNNATC | 2 cut(s) | 1786, 1952 |
| BseAI | TCCGGA | 1 cut(s) | 735 |
| BseBI | CCWGG | 4 cut(s) | 1815, 2340, 2365, 2471 |
| BseCI | ATCGAT | 1 cut(s) | 1780 |
| BseDI | CCNNGG | 1 cut(s) | 629 |
| BseGI | GGATG | 1 cut(s) | 2765 |
| BseJI | GATNNNNATC | 2 cut(s) | 1786, 1952 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 429, 1398, 1736, 2486 |
| BseMI | GCAATG | 4 cut(s) | 1175, 1756, 2055, 2703 |
| BseMII | CTCAG | 1 cut(s) | 1234 |
| BseNI | ACTGG | 1 cut(s) | 1018 |
| BseRI | GAGGAG | 1 cut(s) | 1813 |
| BseXI | GCAGC | 1 cut(s) | 1766 |
| BsgI | GTGCAG | 2 cut(s) | 1327, 1716 |
| BshFI | GGCC | 4 cut(s) | 479, 971, 1656, 2469 |
| BshVI | ATCGAT | 1 cut(s) | 1780 |
| BsiHKAI | GWGCWC | 3 cut(s) | 1301, 1531, 1621 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1842 |
| BsiSI | CCGG | 3 cut(s) | 109, 736, 1737 |
| BslFI | GGGAC | 2 cut(s) | 655, 2741 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 429, 1398, 1736, 2486 |
| BsmAI | GTCTC | 3 cut(s) | 101, 932, 1899 |
| BsmFI | GGGAC | 2 cut(s) | 655, 2741 |
| BsmI | GAATGC | 2 cut(s) | 1575, 2784 |
| BsnI | GGCC | 4 cut(s) | 479, 971, 1656, 2469 |
| BsoBI | CYCGRG | 1 cut(s) | 1842 |
| Bsp1286I | GDGCHC | 3 cut(s) | 1301, 1531, 1621 |
| Bsp13I | TCCGGA | 1 cut(s) | 735 |
| Bsp1407I | TGTACA | 2 cut(s) | 2406, 2515 |
| BspACI | CCGC | 1 cut(s) | 1644 |
| BspANI | GGCC | 4 cut(s) | 479, 971, 1656, 2469 |
| BspCNI | CTCAG | 1 cut(s) | 1233 |
| BspDI | ATCGAT | 1 cut(s) | 1780 |
| BspEI | TCCGGA | 1 cut(s) | 735 |
| BspHI | TCATGA | 1 cut(s) | 2637 |
| BspLI | GGNNCC | 3 cut(s) | 543, 627, 1819 |
| BspOI | GCTAGC | 1 cut(s) | 1761 |
| BspPI | GGATC | 4 cut(s) | 1252, 1776, 2005, 2481 |
| BsrDI | GCAATG | 4 cut(s) | 1175, 1756, 2055, 2703 |
| BsrGI | TGTACA | 2 cut(s) | 2406, 2515 |
| BsrI | ACTGG | 1 cut(s) | 1018 |
| BssECI | CCNNGG | 1 cut(s) | 629 |
| BssNAI | GTATAC | 2 cut(s) | 79, 2015 |
| BssNI | GRCGYC | 1 cut(s) | 702 |
| BssT1I | CCWWGG | 1 cut(s) | 629 |
| Bst1107I | GTATAC | 2 cut(s) | 79, 2015 |
| Bst2UI | CCWGG | 4 cut(s) | 1815, 2340, 2365, 2471 |
| Bst4CI | ACNGT | 6 cut(s) | 376, 490, 908, 2192, 2215, 2666 |
| Bst6I | CTCTTC | 1 cut(s) | 2254 |
| BstACI | GRCGYC | 1 cut(s) | 702 |
| BstAUI | TGTACA | 2 cut(s) | 2406, 2515 |
| BstC8I | GCNNGC | 2 cut(s) | 1759, 2460 |
| BstDEI | CTNAG | 7 cut(s) | 20, 219, 1220, 1262, 2149, 2483, 2648 |
| BstF5I | GGATG | 1 cut(s) | 2765 |
| BstH2I | RGCGCY | 1 cut(s) | 2247 |
| BstHHI | GCGC | 2 cut(s) | 1168, 2246 |
| BstMAI | GTCTC | 3 cut(s) | 101, 932, 1899 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 1296, 2250 |
| BstNI | CCWGG | 4 cut(s) | 1815, 2340, 2365, 2471 |
| BstNSI | RCATGY | 7 cut(s) | 152, 676, 1388, 1697, 2035, 2069, 2462 |
| BstSCI | CCNGG | 6 cut(s) | 107, 1735, 1813, 2338, 2363, 2469 |
| BstV1I | GCAGC | 1 cut(s) | 1766 |
| BstV2I | GAAGAC | 1 cut(s) | 2054 |
| BstX2I | RGATCY | 1 cut(s) | 168 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1792 |
| BstYI | RGATCY | 1 cut(s) | 168 |
| BstZ17I | GTATAC | 2 cut(s) | 79, 2015 |
| Bsu15I | ATCGAT | 1 cut(s) | 1780 |
| BsuRI | GGCC | 4 cut(s) | 479, 971, 1656, 2469 |
| BsuTUI | ATCGAT | 1 cut(s) | 1780 |
| BtrI | CACGTC | 1 cut(s) | 1861 |
| BtsCI | GGATG | 1 cut(s) | 2765 |
| BtsI | GCAGTG | 1 cut(s) | 1285 |
| BtsIMutI | CAGTG | 3 cut(s) | 1228, 1285, 1529 |
| Cac8I | GCNNGC | 2 cut(s) | 1759, 2460 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1287 |
| CciI | TCATGA | 1 cut(s) | 2637 |
| CfoI | GCGC | 2 cut(s) | 1168, 2246 |
| Cfr13I | GGNCC | 8 cut(s) | 444, 462, 542, 626, 1278, 1309, 2287, 2296 |
| ClaI | ATCGAT | 1 cut(s) | 1780 |
| Csp6I | GTAC | 6 cut(s) | 320, 1388, 1864, 2312, 2407, 2516 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2690, 2725 |
| CviQI | GTAC | 6 cut(s) | 320, 1388, 1864, 2312, 2407, 2516 |
| DdeI | CTNAG | 7 cut(s) | 20, 219, 1220, 1262, 2149, 2483, 2648 |
| DraI | TTTAAA | 3 cut(s) | 385, 412, 604 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1192 |
| EaeI | YGGCCR | 3 cut(s) | 969, 1654, 2467 |
| Eam1104I | CTCTTC | 1 cut(s) | 2254 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1192 |
| EarI | CTCTTC | 1 cut(s) | 2254 |
| EciI | GGCGGA | 1 cut(s) | 1633 |
| Eco130I | CCWWGG | 1 cut(s) | 629 |
| Eco47I | GGWCC | 8 cut(s) | 444, 462, 542, 626, 1278, 1309, 2287, 2296 |
| Eco88I | CYCGRG | 1 cut(s) | 1842 |
| EcoRI | GAATTC | 1 cut(s) | 1271 |
| EcoRII | CCWGG | 4 cut(s) | 1813, 2338, 2363, 2469 |
| EcoT14I | CCWWGG | 1 cut(s) | 629 |
| EcoT22I | ATGCAT | 2 cut(s) | 1695, 2847 |
| ErhI | CCWWGG | 1 cut(s) | 629 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1662, 1694 |
| FaqI | GGGAC | 2 cut(s) | 655, 2741 |
| FauNDI | CATATG | 2 cut(s) | 1097, 2292 |
| FbaI | TGATCA | 1 cut(s) | 1533 |
| FblI | GTMKAC | 2 cut(s) | 78, 2014 |
| Fnu4HI | GCNGC | 1 cut(s) | 1755 |
| FokI | GGATG | 1 cut(s) | 2772 |
| Fsp4HI | GCNGC | 1 cut(s) | 1755 |
| FspBI | CTAG | 6 cut(s) | 980, 1463, 1650, 1758, 2256, 2441 |
| FspI | TGCGCA | 1 cut(s) | 1167 |
| GlaI | GCGC | 2 cut(s) | 1167, 2245 |
| GluI | GCNGC | 1 cut(s) | 1755 |
| GsuI | CTGGAG | 2 cut(s) | 196, 645 |
| HaeII | RGCGCY | 1 cut(s) | 2247 |
| HaeIII | GGCC | 4 cut(s) | 479, 971, 1656, 2469 |
| HapII | CCGG | 3 cut(s) | 109, 736, 1737 |
| HhaI | GCGC | 2 cut(s) | 1168, 2246 |
| Hin1I | GRCGYC | 1 cut(s) | 702 |
| Hin6I | GCGC | 2 cut(s) | 1166, 2244 |
| HinP1I | GCGC | 2 cut(s) | 1166, 2244 |
| HincII | GTYRAC | 1 cut(s) | 1183 |
| HindII | GTYRAC | 1 cut(s) | 1183 |
| HindIII | AAGCTT | 1 cut(s) | 2089 |
| HinfI | GANTC | 9 cut(s) | 265, 502, 571, 1111, 1829, 1868, 1953, 2435, 2854 |
| HpaII | CCGG | 3 cut(s) | 109, 736, 1737 |
| HphI | GGTGA | 7 cut(s) | 193, 646, 874, 2468, 2642, 2824, 2848 |
| Hpy188I | TCNGA | 6 cut(s) | 228, 1257, 1568, 1828, 2179, 2506 |
| Hpy99I | CGWCG | 3 cut(s) | 1213, 1862, 2531 |
| HpyAV | CCTTC | 6 cut(s) | 720, 756, 777, 823, 2090, 2718 |
| HpyCH4III | ACNGT | 6 cut(s) | 376, 490, 908, 2192, 2215, 2666 |
| HpyCH4IV | ACGT | 8 cut(s) | 57, 198, 702, 896, 1037, 1119, 1541, 1860 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 1296, 2250 |
| HpyF3I | CTNAG | 7 cut(s) | 20, 219, 1220, 1262, 2149, 2483, 2648 |
| HpySE526I | ACGT | 8 cut(s) | 57, 198, 702, 896, 1037, 1119, 1541, 1860 |
| Hsp92I | GRCGYC | 1 cut(s) | 702 |
| HspAI | GCGC | 2 cut(s) | 1166, 2244 |
| Kpn2I | TCCGGA | 1 cut(s) | 735 |
| Ksp22I | TGATCA | 1 cut(s) | 1533 |
| LmnI | GCTCC | 2 cut(s) | 1019, 1526 |
| Lsp1109I | GCAGC | 1 cut(s) | 1766 |
| LweI | GCATC | 3 cut(s) | 333, 2296, 2795 |
| MaeI | CTAG | 6 cut(s) | 980, 1463, 1650, 1758, 2256, 2441 |
| MaeII | ACGT | 8 cut(s) | 57, 198, 702, 896, 1037, 1119, 1541, 1860 |
| MfeI | CAATTG | 2 cut(s) | 1451, 2817 |
| MflI | RGATCY | 1 cut(s) | 168 |
| MhlI | GDGCHC | 3 cut(s) | 1301, 1531, 1621 |
| MlsI | TGGCCA | 2 cut(s) | 971, 2469 |
| MluNI | TGGCCA | 2 cut(s) | 971, 2469 |
| MmeI | TCCRAC | 3 cut(s) | 472, 1128, 1857 |
| Mox20I | TGGCCA | 2 cut(s) | 971, 2469 |
| Mph1103I | ATGCAT | 2 cut(s) | 1695, 2847 |
| MroI | TCCGGA | 1 cut(s) | 735 |
| MscI | TGGCCA | 2 cut(s) | 971, 2469 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1505, 1790 |
| Msp20I | TGGCCA | 2 cut(s) | 971, 2469 |
| MspI | CCGG | 3 cut(s) | 109, 736, 1737 |
| MspR9I | CCNGG | 6 cut(s) | 109, 1737, 1815, 2340, 2365, 2471 |
| MssI | GTTTAAAC | 1 cut(s) | 604 |
| MunI | CAATTG | 2 cut(s) | 1451, 2817 |
| Mva1269I | GAATGC | 2 cut(s) | 1575, 2784 |
| MvaI | CCWGG | 4 cut(s) | 1815, 2340, 2365, 2471 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 1296, 2250 |
| NciI | CCSGG | 2 cut(s) | 109, 1737 |
| NdeI | CATATG | 2 cut(s) | 1097, 2292 |
| NheI | GCTAGC | 1 cut(s) | 1757 |
| NlaIV | GGNNCC | 3 cut(s) | 543, 627, 1819 |
| NmuCI | GTSAC | 6 cut(s) | 199, 880, 1064, 1554, 2812, 2858 |
| NsbI | TGCGCA | 1 cut(s) | 1167 |
| NsiI | ATGCAT | 2 cut(s) | 1695, 2847 |
| NspI | RCATGY | 7 cut(s) | 152, 676, 1388, 1697, 2035, 2069, 2462 |
| PaeI | GCATGC | 1 cut(s) | 2462 |
| PagI | TCATGA | 1 cut(s) | 2637 |
| PciI | ACATGT | 4 cut(s) | 148, 672, 1384, 2065 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1863 |
| PctI | GAATGC | 2 cut(s) | 1575, 2784 |
| PfeI | GAWTC | 9 cut(s) | 265, 502, 571, 1111, 1829, 1868, 1953, 2435, 2854 |
| PfoI | TCCNGGA | 2 cut(s) | 1813, 2338 |
| PkrI | GCNGC | 1 cut(s) | 1756 |
| PmeI | GTTTAAAC | 1 cut(s) | 604 |
| PscI | ACATGT | 4 cut(s) | 148, 672, 1384, 2065 |
| PshBI | ATTAAT | 1 cut(s) | 243 |
| PsiI | TTATAA | 4 cut(s) | 1586, 1713, 2087, 2357 |
| Psp6I | CCWGG | 4 cut(s) | 1813, 2338, 2363, 2469 |
| PspGI | CCWGG | 4 cut(s) | 1813, 2338, 2363, 2469 |
| PspN4I | GGNNCC | 3 cut(s) | 543, 627, 1819 |
| PspPI | GGNCC | 8 cut(s) | 444, 462, 542, 626, 1278, 1309, 2287, 2296 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1287 |
| PsuI | RGATCY | 1 cut(s) | 168 |
| RsaI | GTAC | 6 cut(s) | 321, 1389, 1865, 2313, 2408, 2517 |
| RsaNI | GTAC | 6 cut(s) | 320, 1388, 1864, 2312, 2407, 2516 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1505, 1790 |
| SatI | GCNGC | 1 cut(s) | 1755 |
| Sau96I | GGNCC | 8 cut(s) | 444, 462, 542, 626, 1278, 1309, 2287, 2296 |
| ScaI | AGTACT | 1 cut(s) | 2313 |
| ScrFI | CCNGG | 6 cut(s) | 109, 1737, 1815, 2340, 2365, 2471 |
| SduI | GDGCHC | 3 cut(s) | 1301, 1531, 1621 |
| SfaNI | GCATC | 3 cut(s) | 333, 2296, 2795 |
| SinI | GGWCC | 8 cut(s) | 444, 462, 542, 626, 1278, 1309, 2287, 2296 |
| SmiI | ATTTAAAT | 1 cut(s) | 385 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1505, 1790 |
| SmlI | CTYRAG | 2 cut(s) | 1369, 1962 |
| SmoI | CTYRAG | 2 cut(s) | 1369, 1962 |
| SpeI | ACTAGT | 2 cut(s) | 1462, 1649 |
| SphI | GCATGC | 1 cut(s) | 2462 |
| SsiI | CCGC | 1 cut(s) | 1644 |
| SspI | AATATT | 3 cut(s) | 395, 614, 2083 |
| SspMI | CTAG | 6 cut(s) | 980, 1463, 1650, 1758, 2256, 2441 |
| StyD4I | CCNGG | 6 cut(s) | 107, 1735, 1813, 2338, 2363, 2469 |
| StyI | CCWWGG | 1 cut(s) | 629 |
| SwaI | ATTTAAAT | 1 cut(s) | 385 |
| TaaI | ACNGT | 6 cut(s) | 376, 490, 908, 2192, 2215, 2666 |
| TaiI | ACGT | 8 cut(s) | 60, 201, 705, 899, 1040, 1122, 1544, 1863 |
| TaqI | TCGA | 7 cut(s) | 401, 472, 1208, 1780, 2137, 2686, 2754 |
| TatI | WGTACW | 3 cut(s) | 2311, 2406, 2515 |
| TfiI | GAWTC | 9 cut(s) | 265, 502, 571, 1111, 1829, 1868, 1953, 2435, 2854 |
| TscAI | CASTG | 3 cut(s) | 1228, 1292, 1536 |
| TseFI | GTSAC | 6 cut(s) | 199, 880, 1064, 1554, 2812, 2858 |
| TseI | GCWGC | 1 cut(s) | 1754 |
| Tsp45I | GTSAC | 6 cut(s) | 199, 880, 1064, 1554, 2812, 2858 |
| TspGWI | ACGGA | 1 cut(s) | 2544 |
| TspRI | CASTG | 3 cut(s) | 1228, 1292, 1536 |
| VpaK11BI | GGWCC | 8 cut(s) | 444, 462, 542, 626, 1278, 1309, 2287, 2296 |
| VspI | ATTAAT | 1 cut(s) | 243 |
| XbaI | TCTAGA | 2 cut(s) | 979, 2255 |
| XceI | RCATGY | 7 cut(s) | 152, 676, 1388, 1697, 2035, 2069, 2462 |
| XmiI | GTMKAC | 2 cut(s) | 78, 2014 |
| XspI | CTAG | 6 cut(s) | 980, 1463, 1650, 1758, 2256, 2441 |
| ZraI | GACGTC | 1 cut(s) | 703 |
| ZrmI | AGTACT | 1 cut(s) | 2313 |
| Zsp2I | ATGCAT | 2 cut(s) | 1695, 2847 |