Rh1AG202600

TMV resistance protein N-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1A
OG0000036
Physical Location & Seq
Forward (+)
38407941 .. 38415978
8038 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1AG202600.1

Sequence Viewer

Length: 1455 bp
ATGGCGGTAGGTACAACCGTTTGGCAGTTGAAATTCAGCAACGGGGAGAGAGACGAGCAGGCCGACGGTGCCAGACTTAAACTTAAAGAGCGAGGGGTTGCGTCAAGGTTTGGCACACCATACCAATGGGATAAGAACCACAGCCTAGTTGACTGGGAATACAAATATAAGTTAGAACCCATTGGAAGAGTTGATGTAGAAATGCTTAACCTTTTGGGCTTGAGAAACTTGGACTTCGAAATCATGCCAACCATTCGGATATGTAAACCATTTCAAGGTTATGAAATATTTCATCATGGTGGAATCCAGGGACTGCATGAGTATGATTGTACAAACTCTCACTTCAAAGGAAATGCAAGAAAGATAGATATGTTCAGCACATTTCTTCCTGGGAATGTGGTTCCAGGCCATTTCACCCATAAAAGTAAAGAACCCTCCTCAATATCATTTATAGTGCCTTTGCCTTCACTTCCCGGTCTTAGAATTCGAGGCTTTAACATCTTCATTGTCTATGCAATTTCTGATGATGTCGATGACAAAAATTATTACTGGCCTAGTAATGAACGTGACAAGGGTGCAGTATCTATTAAAGTCGAAAATGAGAGCAACGATGACAACTGGGATTATAGTCCAGTATTCCATGCTATTCCAGGGAAGGGAGAAGACATGACATGGTTAAGCCATTGGAATATGAAAAATCAAGTCAAAGGTGGGGATCAAATGGCTGTTTCATTCCGGGTACAATTTAGTACATTTTTGTTTCTGGTAAAAGAGTGGGGAATCCAGGTTGTACAGGAGAAGCAAGAGGATAAGACGTATACCGACCTCAACAGTACCACCAATGCTAATTGTAATCCGTGTGCCACTGGCGGAGATATGTCAAGCTCTGATGAGCCATTGCCAGGACCATACTTGCTCTCCTATGAACCTCATACAGTGGAAGCAGATAATTGTAATCCCTGTGGCACTGATGGAGATATGTCAAGCTCTGATGAACCATTGCCAGGACCATACTTGCTCTCCTATGAACCTCATACAGTGGAAGCAGATAAAGATAAAAAAGGAGATGAAGAAGAGGCAGAGGGTGATCTTTTTCCTGCATCAGCAATGAGGACTGGCAGCAACAGCCGCGAGCGGGGTTTCAGAAAGTGGAAGGTGCTTATCATTACCGCTGTCATCCTTGCTGCTGCCATCAGTGCCGCTCATCATTTTGAGGACCCTGATCTCGACACAAATCTATCTAAAACTGTCACTAATCCAGAAGAAGAGGATGAAGATCAAACACTTGGAGCAGCAGCTAGCACTGATGGCAGTAACAACGGCACGCAGGGACTCAGAATGCGGAAGATGCTCATCATTGCCGCTGTCTTCTTTATTCTCTCTTTATCTGTTCACTGGCTCTTCTCTTTCTCCGGTAGAGAGAGATCCATGTCGTCCATTTTGGTACCTACATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_8 NB-ARC TIR

Protein Analysis

484

Amino Acids

54.22

Weight (kDa)

5.03

Isoelectric Point (pI)

26.5

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000036)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G57630 AT1G72930 AT5G38344
fragaria_vesca FvH4_1g27020 FvH4_2g00931 FvH4_2g17330 FvH4_2g17330 FvH4_2g17340 FvH4_2g17350 FvH4_2g20690 FvH4_5g15301 FvH4_5g34194 FvH4_5g38530 FvH4_5g38740 FvH4_5g38740 FvH4_5g38740 FvH4_6g03800 FvH4_7g09791 FvH4_7g09800 FvH4_7g09800 FvH4_7g10510 FvH4_7g10520 FvH4_7g10520 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750
malus_domestica MD02G1217100.v1.1 MD02G1217200.v1.1 MD02G1217400.v1.1 MD02G1217600.v1.1 MD02G1264800.v1.1 MD02G1264900.v1.1 MD02G1302100.v1.1 MD04G1010700.v1.1 MD05G1006800.v1.1 MD05G1140100.v1.1 MD05G1140200.v1.1 MD05G1152200.v1.1 MD07G1073500.v1.1 MD07G1101700.v1.1 MD07G1102200.v1.1 MD07G1103200.v1.1 MD07G1112300.v1.1 MD08G1018200.v1.1 MD08G1018400.v1.1 MD08G1018800.v1.1 MD08G1019000.v1.1 MD08G1019100.v1.1 MD08G1019200.v1.1 MD08G1019300.v1.1 MD08G1019400.v1.1 MD08G1019600.v1.1 MD08G1019900.v1.1 MD08G1020000.v1.1 MD08G1020200.v1.1 MD08G1020500.v1.1 MD08G1020700.v1.1 MD08G1020800.v1.1 MD08G1040700.v1.1 MD11G1112400.v1.1 MD12G1068600.v1.1 MD12G1193200.v1.1 MD13G1050600.v1.1 MD15G1374900.v1.1 MD15G1375100.v1.1 MD15G1416500.v1.1 MD17G1072500.v1.1 MD17G1274200.v1.1 MD17G1274900.v1.1
prunus_persica Prupe.2G121000_v2.0.a1 Prupe.2G121000_v2.0.a1 Prupe.2G125800_v2.0.a1 Prupe.2G126000_v2.0.a1 Prupe.2G126100_v2.0.a1 Prupe.2G126200_v2.0.a1 Prupe.2G126300_v2.0.a1 Prupe.2G126400_v2.0.a1 Prupe.2G126500_v2.0.a1 Prupe.2G126600_v2.0.a1 Prupe.2G126700_v2.0.a1 Prupe.2G126700_v2.0.a1 Prupe.2G126800_v2.0.a1 Prupe.2G126900_v2.0.a1 Prupe.2G127000_v2.0.a1 Prupe.2G127000_v2.0.a1 Prupe.2G127000_v2.0.a1 Prupe.2G127000_v2.0.a1 Prupe.2G135500_v2.0.a1 Prupe.2G135600_v2.0.a1 Prupe.2G135700_v2.0.a1 Prupe.2G135700_v2.0.a1 Prupe.3G009800_v2.0.a1 Prupe.3G010200_v2.0.a1 Prupe.3G131000_v2.0.a1 Prupe.4G260800_v2.0.a1 Prupe.4G260900_v2.0.a1 Prupe.6G083100_v2.0.a1 Prupe.6G083200_v2.0.a1 Prupe.6G083400_v2.0.a1 Prupe.6G132100_v2.0.a1 Prupe.8G184900_v2.0.a1 Prupe.8G185200_v2.0.a1 Prupe.8G185300_v2.0.a1
pyrus_communis pycom02g17870 pycom02g17880 pycom02g19520 pycom02g22610 pycom02g22630 pycom02g22680 pycom05g13540 pycom05g14680 pycom07g04880 pycom07g04890 pycom07g05690 pycom07g05710 pycom07g05720 pycom07g05750 pycom07g05780 pycom07g06300 pycom07g08320 pycom07g08330 pycom07g08350 pycom07g08360 pycom07g08370 pycom07g08410 pycom07g08420 pycom07g08430 pycom07g08440 pycom07g08470 pycom07g08480 pycom07g08520 pycom07g08550 pycom07g08560 pycom07g08640 pycom07g08660 pycom07g08670 pycom07g08680 pycom07g08690 pycom07g08720 pycom07g08730 pycom07g08790 pycom07g08800 pycom07g08810 pycom07g08860 pycom07g08890 pycom07g09720 pycom08g01590 pycom08g01600 pycom08g01620 pycom08g01630 pycom08g01640 pycom10g12630 pycom15g16490 pycom17g07200 pycom17g07210 pycom17g07220 pycom17g11730 pycom17g11740 pycom17g27340 pycom17g27380
rosa_chinensis RchiOBHm_Chr1g0342571 RchiOBHm_Chr1g0346231 RchiOBHm_Chr1g0346831 RchiOBHm_Chr1g0346891 RchiOBHm_Chr1g0348311 RchiOBHm_Chr1g0348321 RchiOBHm_Chr1g0348331 RchiOBHm_Chr1g0348361 RchiOBHm_Chr1g0348371 RchiOBHm_Chr1g0348381 RchiOBHm_Chr1g0348401 RchiOBHm_Chr1g0348411 RchiOBHm_Chr1g0348421 RchiOBHm_Chr1g0348431 RchiOBHm_Chr2g0130881 RchiOBHm_Chr3g0487331 RchiOBHm_Chr5g0060371 RchiOBHm_Chr6g0246491 RchiOBHm_Chr6g0246871 RchiOBHm_Chr6g0250311 RchiOBHm_Chr6g0250781 RchiOBHm_Chr6g0251431 RchiOBHm_Chr6g0281871 RchiOBHm_Chr6g0281881 RchiOBHm_Chr6g0281931 RchiOBHm_Chr6g0281941 RchiOBHm_Chr6g0281951 RchiOBHm_Chr6g0281971 RchiOBHm_Chr6g0281981 RchiOBHm_Chr7g0240541 RchiOBHm_Chr7g0240631 RchiOBHm_Chr7g0240671
rosa_laevigata RLG00000000627 RLG00000000631 RLG00000000641 RLG00000000645 RLG00000000652 RLG00000000662 RLG00000000663 RLG00000000667 RLG00000000670 RLG00000000702 RLG00000001216 RLG00000001219 RLG00000007678 RLG00000012923 RLG00000012996 RLG00000013243 RLG00000017513 RLG00000017514 RLG00000020936 RLG00000022755 RLG00000023013 RLG00000028646 RLG00000028654 RLG00000028662 RLG00000028665 RLG00000028667 RLG00000028711 RLG00000028714 RLG00000028716 RLG00000028770 RLG00000028771 RLG00000028773 RLG00000028778 RLG00000028798 RLG00000028809 RLG00000028813 RLG00000029334 RLG00000030003 RLG00000033910 RLG00000034358 RLG00000035430
rosa_multiflora Rmu_co8031134.1_g000001 Rmu_co8092796.1_g000001 Rmu_co8130156.1_g000001 Rmu_co8325323.1_g000001 Rmu_co8424083.1_g000002 Rmu_sc0000008.1_g000003 Rmu_sc0000008.1_g000011 Rmu_sc0000008.1_g000015 Rmu_sc0000008.1_g000020 Rmu_sc0000091.1_g000015 Rmu_sc0000091.1_g000018 Rmu_sc0000091.1_g000029 Rmu_sc0000091.1_g000031 Rmu_sc0000391.1_g000004 Rmu_sc0001070.1_g000030 Rmu_sc0001293.1_g000016 Rmu_sc0001674.1_g000006 Rmu_sc0001731.1_g000002 Rmu_sc0001731.1_g000003 Rmu_sc0001731.1_g000005 Rmu_sc0001911.1_g000029 Rmu_sc0001913.1_g000038 Rmu_sc0001955.1_g000025 Rmu_sc0001992.1_g000022 Rmu_sc0001992.1_g000028 Rmu_sc0001992.1_g000031 Rmu_sc0002517.1_g000013 Rmu_sc0002517.1_g000017 Rmu_sc0002551.1_g000022 Rmu_sc0002551.1_g000029 Rmu_sc0002551.1_g000038 Rmu_sc0002705.1_g000015 Rmu_sc0002705.1_g000016 Rmu_sc0002882.1_g000055 Rmu_sc0003232.1_g000027 Rmu_sc0003363.1_g000037 Rmu_sc0003600.1_g000054 Rmu_sc0003918.1_g000011 Rmu_sc0004395.1_g000011 Rmu_sc0005071.1_g000004 Rmu_sc0005255.1_g000018 Rmu_sc0005327.1_g000004 Rmu_sc0005597.1_g000007 Rmu_sc0007060.1_g000007 Rmu_sc0007310.1_g000003 Rmu_sc0007383.1_g000014 Rmu_sc0007799.1_g000003 Rmu_sc0008477.1_g000016 Rmu_sc0010151.1_g000009 Rmu_sc0011217.1_g000005 Rmu_sc0016269.1_g000006 Rmu_sc0021495.1_g000001 Rmu_sc0027364.1_g000001 Rmu_sc0029432.1_g000001 Rmu_sc0041386.1_g000001 Rmu_ssc0000126.1_g000023 Rmu_ssc0000126.1_g000027
rosa_roxburghii Rroxscaffold_1G00006130 Rroxscaffold_1G00023320 Rroxscaffold_1G00038770 Rroxscaffold_2G00119800 Rroxscaffold_2G00121860 Rroxscaffold_3G00219780 Rroxscaffold_3G00219890 Rroxscaffold_4G00306740 Rroxscaffold_4G00306820 Rroxscaffold_4G00307000 Rroxscaffold_4G00307010 Rroxscaffold_4G00307020 Rroxscaffold_4G00308030 Rroxscaffold_4G00308070 Rroxscaffold_4G00308450 Rroxscaffold_4G00308460 Rroxscaffold_4G00315320 Rroxscaffold_5G00352470 Rroxscaffold_5G00371420 Rroxscaffold_6G00392300 Rroxscaffold_6G00394870 Rroxscaffold_6G00394890 Rroxscaffold_7G00186700 Rroxscaffold_7G00194980 Rroxscaffold_7G00216840
rosa_rugosa Rorug01G0076100 Rorug01G0128100 Rorug01G0149000.1 Rorug01G0149500.1 Rorug01G0180000 Rorug01G0180100 Rorug01G0182900 Rorug01G0184000 Rorug01G0184100 Rorug01G0184300 Rorug01G0184600 Rorug01G0184700 Rorug01G0184700 Rorug01G0184900 Rorug01G0185000 Rorug01G0185100 Rorug01G0189300 Rorug01G0194100 Rorug01G0194100 Rorug01G0194200 Rorug01G0194400 Rorug01G0194400 Rorug01G0194500 Rorug02G0090400 Rorug02G0090400 Rorug03G0233000 Rorug03G0233100 Rorug05G0178600 Rorug05G0178700 Rorug05G0579200 Rorug06G0144100 Rorug06G0144300 Rorug06G0144300 Rorug06G0179300 Rorug06G0208800 Rorug07G0323500 Rorug07G0337000
rosa_samantha Rh1AG046100 Rh1AG201400 Rh1AG201800 Rh1AG202100 Rh1AG202600 Rh1AG211500 Rh1AG211800 Rh1AG212200 Rh1AG212500 Rh1AG212600 Rh1AG214200 Rh1BG168000 Rh1BG168300 Rh1BG168500 Rh1BG177900 Rh1BG178200 Rh1BG178300 Rh1BG178800 Rh1BG178900 Rh1CG080900 Rh1CG183300 Rh1CG186300 Rh1CG186700 Rh1CG187000 Rh1CG187300 Rh1CG193400 Rh1CG195800 Rh1CG196000 Rh1CG196100 Rh1CG196400 Rh1CG196500 Rh1CG196800 Rh1CG198800 Rh1CG442600 Rh1DG086200 Rh1DG155400 Rh1DG156200 Rh1DG194000 Rh1DG194300 Rh1DG194900 Rh1DG197000 Rh1DG198800 Rh1DG199000 Rh1DG199200 Rh1DG202000 Rh1DG203900 Rh1DG207600 Rh1DG207900 Rh1DG208000 Rh1DG208500 Rh1DG208600 Rh1DG208700 Rh3CG339100 Rh5AG106500 Rh5AG264800 Rh5AG265300 Rh5CG302800 Rh5DG277900 Rh6AG257600 Rh6AG257700 Rh6BG260500 Rh6BG260700 Rh6CG259600 Rh6CG259700 Rh6DG252100 Rh7DG126900
rosa_wichuraiana Rw0G005780 Rw0G007540 Rw0G007550 Rw0G007560 Rw0G009390 Rw1G016900 Rw1G016930 Rw1G016940 Rw1G016970 Rw1G017860 Rw1G017890 Rw1G017900 Rw1G017910 Rw1G017920 Rw1G017960 Rw1G017970 Rw1G017980 Rw1G018150 Rw4G000830 Rw5G009290 Rw5G018950 Rw5G024850 Rw5G024870 Rw5G040460 Rw6G022290 Rw7G041020 Rw7G041200 Rw7G041360 Rw7G041450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1444
AccB1I GGYRCC 2 cut(s) 68, 1444
AccBSI CCGCTC 2 cut(s) 1135, 1202
AccI GTMKAC 1 cut(s) 818
AccII CGCG 1 cut(s) 1131
AciI CCGC 8 cut(s) 5, 870, 1129, 1135, 1170, 1200, 1342, 1362
AclWI GGATC 2 cut(s) 723, 1419
AcsI RAATTY 2 cut(s) 32, 483
AfaI GTAC 7 cut(s) 13, 331, 741, 751, 792, 835, 1446
AfiI CCNNNNNNNGG 5 cut(s) 275, 656, 902, 1004, 1135
AgsI TTSAA 3 cut(s) 31, 275, 346
AjnI CCWGG 7 cut(s) 306, 388, 403, 649, 783, 901, 1003
AluBI AGCT 3 cut(s) 885, 987, 1298
AluI AGCT 3 cut(s) 885, 987, 1298
Alw26I GTCTC 1 cut(s) 45
AlwI GGATC 2 cut(s) 723, 1419
AlwNI CAGNNNCTG 1 cut(s) 313
AoxI GGCC 3 cut(s) 60, 406, 551
ApeKI GCWGC 5 cut(s) 1119, 1184, 1187, 1292, 1295
ApoI RAATTY 2 cut(s) 32, 483
Asp700I GAANNNNTTC 1 cut(s) 288
Asp718I GGTACC 1 cut(s) 1444
AspS9I GGNCC 3 cut(s) 905, 1007, 1216
AsuC2I CCSGG 2 cut(s) 474, 737
AsuHPI GGTGA 2 cut(s) 406, 1097
AsuII TTCGAA 1 cut(s) 237
AsuNHI GCTAGC 1 cut(s) 1298
AvaII GGWCC 3 cut(s) 905, 1007, 1216
BaeI ACNNNNGTAYC 1 cut(s) 36
BanI GGYRCC 2 cut(s) 68, 1444
BbsI GAAGAC 2 cut(s) 669, 1360
BbvI GCAGC 5 cut(s) 1131, 1171, 1174, 1304, 1307
BccI CCATC 3 cut(s) 965, 1199, 1301
BceAI ACGGC 1 cut(s) 1336
BciT130I CCWGG 7 cut(s) 308, 390, 405, 651, 785, 903, 1005
BcnI CCSGG 2 cut(s) 474, 737
BcoDI GTCTC 1 cut(s) 45
BfaI CTAG 3 cut(s) 146, 555, 1299
BisI GCNGC 8 cut(s) 1120, 1129, 1185, 1188, 1200, 1293, 1296, 1362
BlsI GCNGC 8 cut(s) 1121, 1130, 1186, 1189, 1201, 1294, 1297, 1363
Bme1390I CCNGG 9 cut(s) 308, 390, 405, 474, 651, 737, 785, 903, 1005
Bme18I GGWCC 3 cut(s) 905, 1007, 1216
BmgT120I GGNCC 3 cut(s) 905, 1007, 1216
BmiI GGNNCC 4 cut(s) 70, 402, 1218, 1446
BmrFI CCNGG 9 cut(s) 308, 390, 405, 474, 651, 737, 785, 903, 1005
BmrI ACTGGG 2 cut(s) 163, 628
BmsI GCATC 2 cut(s) 1109, 1338
BmtI GCTAGC 1 cut(s) 1302
BmuI ACTGGG 2 cut(s) 163, 628
BpiI GAAGAC 2 cut(s) 669, 1360
Bpu14I TTCGAA 1 cut(s) 237
BpuEI CTTGAG 1 cut(s) 241
BpuMI CCSGG 2 cut(s) 474, 737
BsaBI GATNNNNATC 2 cut(s) 1275, 1352
BsaJI CCNNGG 3 cut(s) 307, 389, 650
BsaWI WCCGGW 1 cut(s) 1412
BsaXI ACNNNNNCTCC 4 cut(s) 902, 932, 1004, 1034
Bsc4I CCNNNNNNNGG 5 cut(s) 275, 656, 902, 1004, 1135
Bse1I ACTGG 7 cut(s) 158, 554, 623, 632, 871, 1120, 1400
Bse3DI GCAATG 4 cut(s) 896, 998, 1113, 1356
Bse8I GATNNNNATC 2 cut(s) 1275, 1352
BseBI CCWGG 7 cut(s) 308, 390, 405, 651, 785, 903, 1005
BseDI CCNNGG 3 cut(s) 307, 389, 650
BseGI GGATG 2 cut(s) 1176, 1276
BseJI GATNNNNATC 2 cut(s) 1275, 1352
BseLI CCNNNNNNNGG 5 cut(s) 275, 656, 902, 1004, 1135
BseMI GCAATG 4 cut(s) 896, 998, 1113, 1356
BseMII CTCAG 1 cut(s) 1348
BseNI ACTGG 7 cut(s) 158, 554, 623, 632, 871, 1120, 1400
BseRI GAGGAG 1 cut(s) 427
BseXI GCAGC 5 cut(s) 1131, 1171, 1174, 1304, 1307
BsgI GTGCAG 1 cut(s) 597
Bsh1236I CGCG 1 cut(s) 1131
BshFI GGCC 3 cut(s) 62, 408, 553
BshNI GGYRCC 2 cut(s) 68, 1444
BsiSI CCGG 3 cut(s) 474, 736, 1413
BslFI GGGAC 2 cut(s) 324, 1344
BslI CCNNNNNNNGG 5 cut(s) 275, 656, 902, 1004, 1135
BsmAI GTCTC 1 cut(s) 45
BsmBI CGTCTC 1 cut(s) 45
BsmFI GGGAC 2 cut(s) 324, 1344
BsmI GAATGC 1 cut(s) 1344
BsnI GGCC 3 cut(s) 62, 408, 553
Bsp119I TTCGAA 1 cut(s) 237
Bsp1407I TGTACA 2 cut(s) 329, 790
Bsp143I GATC 5 cut(s) 715, 1087, 1222, 1276, 1424
BspACI CCGC 8 cut(s) 5, 870, 1129, 1135, 1170, 1200, 1342, 1362
BspANI GGCC 3 cut(s) 62, 408, 553
BspCNI CTCAG 1 cut(s) 1347
BspFNI CGCG 1 cut(s) 1131
BspLI GGNNCC 4 cut(s) 70, 402, 1218, 1446
BspOI GCTAGC 1 cut(s) 1302
BspPI GGATC 2 cut(s) 723, 1419
BspQI GCTCTTC 1 cut(s) 1406
BspT104I TTCGAA 1 cut(s) 237
BspT107I GGYRCC 2 cut(s) 68, 1444
BsrBI CCGCTC 2 cut(s) 1135, 1202
BsrDI GCAATG 4 cut(s) 896, 998, 1113, 1356
BsrGI TGTACA 2 cut(s) 329, 790
BsrI ACTGG 7 cut(s) 158, 554, 623, 632, 871, 1120, 1400
BssECI CCNNGG 3 cut(s) 307, 389, 650
BssMI GATC 5 cut(s) 715, 1087, 1222, 1276, 1424
BssNAI GTATAC 1 cut(s) 819
Bst1107I GTATAC 1 cut(s) 819
Bst2UI CCWGG 7 cut(s) 308, 390, 405, 651, 785, 903, 1005
Bst4CI ACNGT 6 cut(s) 19, 68, 833, 937, 1039, 1249
Bst6I CTCTTC 4 cut(s) 181, 1068, 1260, 1406
BstAUI TGTACA 2 cut(s) 329, 790
BstBI TTCGAA 1 cut(s) 237
BstC8I GCNNGC 4 cut(s) 60, 1133, 1300, 1325
BstDEI CTNAG 2 cut(s) 479, 1334
BstF5I GGATG 2 cut(s) 1176, 1276
BstFNI CGCG 1 cut(s) 1131
BstKTI GATC 5 cut(s) 718, 1090, 1225, 1279, 1427
BstMAI GTCTC 1 cut(s) 45
BstMBI GATC 5 cut(s) 715, 1087, 1222, 1276, 1424
BstMWI GCNNNNNNNGC 6 cut(s) 68, 1125, 1128, 1196, 1308, 1348
BstNI CCWGG 7 cut(s) 308, 390, 405, 651, 785, 903, 1005
BstSCI CCNGG 9 cut(s) 306, 388, 403, 472, 649, 735, 783, 901, 1003
BstUI CGCG 1 cut(s) 1131
BstV1I GCAGC 5 cut(s) 1131, 1171, 1174, 1304, 1307
BstV2I GAAGAC 2 cut(s) 669, 1360
BstX2I RGATCY 1 cut(s) 1424
BstXI CCANNNNNNTGG 1 cut(s) 126
BstYI RGATCY 1 cut(s) 1424
BstZ17I GTATAC 1 cut(s) 819
BsuRI GGCC 3 cut(s) 62, 408, 553
BtsCI GGATG 2 cut(s) 1176, 1276
BtsIMutI CAGTG 7 cut(s) 864, 942, 966, 1044, 1201, 1302, 1393
Cac8I GCNNGC 4 cut(s) 60, 1133, 1300, 1325
CaiI CAGNNNCTG 1 cut(s) 313
Cfr13I GGNCC 3 cut(s) 905, 1007, 1216
CseI GACGC 1 cut(s) 90
Csp6I GTAC 7 cut(s) 12, 330, 740, 750, 791, 834, 1445
CviAII CATG 8 cut(s) 244, 296, 317, 641, 667, 672, 1429, 1452
CviQI GTAC 7 cut(s) 12, 330, 740, 750, 791, 834, 1445
DdeI CTNAG 2 cut(s) 479, 1334
DpnI GATC 5 cut(s) 717, 1089, 1224, 1278, 1426
DpnII GATC 5 cut(s) 715, 1087, 1222, 1276, 1424
Eam1104I CTCTTC 4 cut(s) 181, 1068, 1260, 1406
EarI CTCTTC 4 cut(s) 181, 1068, 1260, 1406
EciI GGCGGA 1 cut(s) 885
Eco47I GGWCC 3 cut(s) 905, 1007, 1216
EcoO109I RGGNCCY 1 cut(s) 1216
EcoRI GAATTC 1 cut(s) 483
EcoRII CCWGG 7 cut(s) 306, 388, 403, 649, 783, 901, 1003
Esp3I CGTCTC 1 cut(s) 45
FaeI CATG 8 cut(s) 247, 299, 320, 644, 670, 675, 1432, 1455
FaqI GGGAC 2 cut(s) 324, 1344
FatI CATG 8 cut(s) 243, 295, 316, 640, 666, 671, 1428, 1451
FauI CCCGC 1 cut(s) 1128
FblI GTMKAC 1 cut(s) 818
Fnu4HI GCNGC 8 cut(s) 1120, 1129, 1185, 1188, 1200, 1293, 1296, 1362
FokI GGATG 2 cut(s) 1163, 1283
Fsp4HI GCNGC 8 cut(s) 1120, 1129, 1185, 1188, 1200, 1293, 1296, 1362
FspBI CTAG 3 cut(s) 146, 555, 1299
GluI GCNGC 8 cut(s) 1120, 1129, 1185, 1188, 1200, 1293, 1296, 1362
HaeIII GGCC 3 cut(s) 62, 408, 553
HapII CCGG 3 cut(s) 474, 736, 1413
HgaI GACGC 1 cut(s) 90
Hin1II CATG 8 cut(s) 247, 299, 320, 644, 670, 675, 1432, 1455
HincII GTYRAC 1 cut(s) 151
HindII GTYRAC 1 cut(s) 151
HinfI GANTC 3 cut(s) 303, 780, 1332
HpaII CCGG 3 cut(s) 474, 736, 1413
HphI GGTGA 2 cut(s) 406, 1097
Hpy166II GTNNAC 4 cut(s) 151, 266, 819, 1393
Hpy188I TCNGA 6 cut(s) 258, 523, 889, 991, 1145, 1337
Hpy188III TCNNGA 2 cut(s) 1226, 1259
Hpy8I GTNNAC 4 cut(s) 151, 266, 819, 1393
Hpy99I CGWCG 1 cut(s) 68
HpyAV CCTTC 3 cut(s) 474, 649, 1147
HpyCH4III ACNGT 6 cut(s) 19, 68, 833, 937, 1039, 1249
HpyCH4IV ACGT 2 cut(s) 565, 815
HpyCH4V TGCA 5 cut(s) 316, 356, 515, 578, 1100
HpyF10VI GCNNNNNNNGC 6 cut(s) 68, 1125, 1128, 1196, 1308, 1348
HpyF3I CTNAG 2 cut(s) 479, 1334
HpySE526I ACGT 2 cut(s) 565, 815
Hsp92II CATG 8 cut(s) 247, 299, 320, 644, 670, 675, 1432, 1455
KpnI GGTACC 1 cut(s) 1448
Kzo9I GATC 5 cut(s) 715, 1087, 1222, 1276, 1424
LguI GCTCTTC 1 cut(s) 1406
LmnI GCTCC 1 cut(s) 1289
Lsp1109I GCAGC 5 cut(s) 1131, 1171, 1174, 1304, 1307
LweI GCATC 2 cut(s) 1109, 1338
MaeI CTAG 3 cut(s) 146, 555, 1299
MaeII ACGT 2 cut(s) 565, 815
MaeIII GTNAC 3 cut(s) 566, 1249, 1313
MalI GATC 5 cut(s) 717, 1089, 1224, 1278, 1426
MbiI CCGCTC 2 cut(s) 1135, 1202
MboI GATC 5 cut(s) 715, 1087, 1222, 1276, 1424
MflI RGATCY 1 cut(s) 1424
MluCI AATT 7 cut(s) 32, 483, 516, 541, 743, 847, 949
MlyI GAGTC 1 cut(s) 1326
MroXI GAANNNNTTC 1 cut(s) 288
MseI TTAA 6 cut(s) 78, 84, 207, 495, 588, 677
MslI CAYNNNNRTG 3 cut(s) 124, 297, 321
MspA1I CMGCKG 2 cut(s) 1172, 1364
MspI CCGG 3 cut(s) 474, 736, 1413
MspR9I CCNGG 9 cut(s) 308, 390, 405, 474, 651, 737, 785, 903, 1005
Mva1269I GAATGC 1 cut(s) 1344
MvaI CCWGG 7 cut(s) 308, 390, 405, 651, 785, 903, 1005
MvnI CGCG 1 cut(s) 1131
MwoI GCNNNNNNNGC 6 cut(s) 68, 1125, 1128, 1196, 1308, 1348
NciI CCSGG 2 cut(s) 474, 737
NdeII GATC 5 cut(s) 715, 1087, 1222, 1276, 1424
NheI GCTAGC 1 cut(s) 1298
NlaIII CATG 8 cut(s) 247, 299, 320, 644, 670, 675, 1432, 1455
NlaIV GGNNCC 4 cut(s) 70, 402, 1218, 1446
NmuCI GTSAC 2 cut(s) 566, 1249
NspV TTCGAA 1 cut(s) 237
PciSI GCTCTTC 1 cut(s) 1406
PcsI WCGNNNNNNNCGW 1 cut(s) 60
PctI GAATGC 1 cut(s) 1344
PdmI GAANNNNTTC 1 cut(s) 288
PfeI GAWTC 2 cut(s) 303, 780
PkrI GCNGC 8 cut(s) 1121, 1130, 1186, 1189, 1201, 1294, 1297, 1363
PleI GAGTC 1 cut(s) 1326
PpsI GAGTC 1 cut(s) 1326
PpuMI RGGWCCY 1 cut(s) 1216
Psp5II RGGWCCY 1 cut(s) 1216
Psp6I CCWGG 7 cut(s) 306, 388, 403, 649, 783, 901, 1003
PspGI CCWGG 7 cut(s) 306, 388, 403, 649, 783, 901, 1003
PspN4I GGNNCC 4 cut(s) 70, 402, 1218, 1446
PspPI GGNCC 3 cut(s) 905, 1007, 1216
PspPPI RGGWCCY 1 cut(s) 1216
PstNI CAGNNNCTG 1 cut(s) 313
PsuI RGATCY 1 cut(s) 1424
RsaI GTAC 7 cut(s) 13, 331, 741, 751, 792, 835, 1446
RsaNI GTAC 7 cut(s) 12, 330, 740, 750, 791, 834, 1445
RseI CAYNNNNRTG 3 cut(s) 124, 297, 321
SapI GCTCTTC 1 cut(s) 1406
SaqAI TTAA 6 cut(s) 78, 84, 207, 495, 588, 677
SatI GCNGC 8 cut(s) 1120, 1129, 1185, 1188, 1200, 1293, 1296, 1362
Sau3AI GATC 5 cut(s) 715, 1087, 1222, 1276, 1424
Sau96I GGNCC 3 cut(s) 905, 1007, 1216
SchI GAGTC 1 cut(s) 1326
ScrFI CCNGG 9 cut(s) 308, 390, 405, 474, 651, 737, 785, 903, 1005
SfaNI GCATC 2 cut(s) 1109, 1338
SfuI TTCGAA 1 cut(s) 237
SinI GGWCC 3 cut(s) 905, 1007, 1216
SmiMI CAYNNNNRTG 3 cut(s) 124, 297, 321
SmlI CTYRAG 1 cut(s) 220
SmoI CTYRAG 1 cut(s) 220
Sse9I AATT 7 cut(s) 32, 483, 516, 541, 743, 847, 949
SsiI CCGC 8 cut(s) 5, 870, 1129, 1135, 1170, 1200, 1342, 1362
SspI AATATT 1 cut(s) 288
SspMI CTAG 3 cut(s) 146, 555, 1299
StyD4I CCNGG 9 cut(s) 306, 388, 403, 472, 649, 735, 783, 901, 1003
TaaI ACNGT 6 cut(s) 19, 68, 833, 937, 1039, 1249
TaiI ACGT 2 cut(s) 568, 818
TaqI TCGA 5 cut(s) 237, 487, 531, 594, 1227
TasI AATT 7 cut(s) 32, 483, 516, 541, 743, 847, 949
TatI WGTACW 3 cut(s) 329, 749, 790
TauI GCSGC 3 cut(s) 1131, 1202, 1364
TfiI GAWTC 2 cut(s) 303, 780
Tru1I TTAA 6 cut(s) 78, 84, 207, 495, 588, 677
Tru9I TTAA 6 cut(s) 78, 84, 207, 495, 588, 677
TscAI CASTG 7 cut(s) 871, 942, 973, 1044, 1201, 1309, 1400
TseFI GTSAC 2 cut(s) 566, 1249
TseI GCWGC 5 cut(s) 1119, 1184, 1187, 1292, 1295
Tsp45I GTSAC 2 cut(s) 566, 1249
TspGWI ACGGA 1 cut(s) 846
TspRI CASTG 7 cut(s) 871, 942, 973, 1044, 1201, 1309, 1400
VpaK11BI GGWCC 3 cut(s) 905, 1007, 1216
XapI RAATTY 2 cut(s) 32, 483
XmiI GTMKAC 1 cut(s) 818
XmnI GAANNNNTTC 1 cut(s) 288
XspI CTAG 3 cut(s) 146, 555, 1299
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.