pycom07g08470

TMV resistance protein

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
Physical Location & Seq
Forward (+)
7811980 .. 7815141
3162 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom07g08470.3

Sequence Viewer

Length: 2502 bp
ATGATATATATGAATTCTTACTCTTCAACTCAATGTCATTGTTTATTTTGTTATCTTACACTATTATTTGGCTCATTGATGTATTTCTTCATTTATTCTTTACTAACCTCTTCGAATGACGTTTTCGAGCGTGCAAGGACCCTTTCTTTTTGGGGTGTGCTATCTACACACACCAAATTACTTCTCACATACCTCTTGTTAATTTATGTCCTAAAATTGGATGTCAGATATCACACATTTTCTTTTATCACGCATTTTATACAGAACTTAATTATGTTTTATTTCCTTTTTATTTGCAACTATAGGTGCAATTTTATTTTTACGACTCTGCCACTAGCAGCCAGCCATGCCTTAAAAGAAATTTGGGGCAATGCATGGGAACACGACCCATTTTATAATTCTCTGCCACTAGCGGTCGGCCATGATTTAAAGAAAGACTTTGGGTCAATAGATAGGAATAACCCAATTAAATATCCCCTGCAAAGAGACATTTGCATTGCATCTAGCAAAGACCAGTTTTTGTGGTTTGAACATCAATCCACATCAATGGCTCTCGTGACAACATCTCAAGGAACCTCCTCTGATTCCAAAAAATTTCGGGGTTACCGATACGACGTCTTCTTGAGCTTCAGAGGCGAAGACACTCGCAAGACTTTTACCGACCACCTCTACACAGCCTTGAACAACGCAGGATTTCTCACGTTTCGAGACGACGATGAACTTGAGAGAGGAGAAGATATAAAGCCAGGACTGCTGAAAGCGATCCAGCTGTCACGAACTTCTGTTGTCGTGTTTTCGAAAGATTACGCGTCATCCAGGTGGTGTCTTGATGAGCTTGTGCTGATCCTTGAACGGAAGAAGACCACCTCGGACCATGTAGTTTTACCAGTCTTCTACGATGTTGATCCGTCCCACGTGAGGAAGCAGACAGGAAGTGTTGGAAAAGCATTTGCTAGACGCCAGAAAAATCAGTCGCCGGAAAAGGTGGAGGGATGGAGGAAGGCACTTGCAGAGATTGCAGACCTAGCAGGCATGGTCTTACAAAATCAAGCTGATGGGTATGAGTCAAAGTTTATTGAAAAAATTGTTAGAGTGATTGGAGGCAAGTTAAGTCGCACACCATTGAGCGTTGTACCAAAATTGATTGGAGTCGAATCTCAAGTCAAAGACATCAATTTGTGGTTACAAGATCGATCAACCTATGTCGGTATACTGGTTGTGTATGGCATGTCTGGAATAGGGAAGACAGCCATTGCAAAACATGTTTACAATTCAAACTTTAGAAGCTTTGAAGGAAGTAGTTTCATTGAAAATATCAGCGAAACAGCAAATCGACCAAATGGCTTAGTTCAAATACAAAAGCAACTTCTTTATGATATTTTGAACGACAGAGAAGTGAAAATACATGGTGTTAGTGAGGGACTAAGAAAGATTGAAAGAGCCATAAGCTCTAGAAGAGTGCTTCTTGTTCTTGATGATGTGGACCATATGGACCAATTAGATGCAGTACTAGAGATGAAAGATCGGTTTTATCCGGGAAGTAAGATACTTATAACAACTAGGCGTGAAAGGTTGCTAAAGGAACATCAAGTTACAAAGGTGCACAAAGTTGGAACTTTGTATTACAATGAGTCTTTAGAGCTTTTCAGTTGGCATGCTTTTCGCCAGGATCATCCCCTTAGAGGTTACATGGAATATTCAAAAAAGGTTGTACACTACTGCGACGGACTTCCATTAGCTCTAAAAGTTTTGGGGTCTTCTTTATCAGGGGAAAGTATAGATGTATGGGAAAGTGCATTGGAGAAGCTAAAAGTTATCCCTAATGGTGAAATCATGAATAAACTAAGAATAAGCTATGACAATTTACAAGATGACCATGACCGGGAATTATTCCTCCACATTGCTTGTTTCCTAATAGGAAGGAACAAAAGCCACATTGTTAGAATACTCGATGGATGTGATTTCTATACAATTGTTGGCATTCAAAATCTCATCGATAAATGCTTGGTGACAGTTGATGGATGCAACAATGTGAAAATGCATGACATGATCCGTGACATGGGAAGAGAAATTGTTTGCCACGAATCAAAAGAGTCTGGAAAACGTAGTAGATTATGGCGCCATAAGGATTCTTTCGAAGTACTGAAGGAAAAGAATGGTACACAAACAATTCAAGGTCTTGCCCTGGATATGCGTATGCATCTTGCAAACAGACCAATAAACACAAATGAGACCGTCTTGGAAACCAATGCATTTGAAAGGATGCGTAATTTACAACTACTCCATCTTAGTCATGTACGACTGGATGGATGTTATGCAAATTTCCCTACAAGATTAAGATGGTTGTGTTGGCTTCAATTTCCATTGGATTCTATACCTGTTGATCTTCCTTTGGATTGTCTAATTGCTCTTGAAATGCAACATAGTAGCTTAAGACAAGTCTGGAAAGGAACAAAAGTATGTTACTCTAGGCATTTCAATTCATTTTCCTTATTTTGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

834

Amino Acids

96.24

Weight (kDa)

8.65

Isoelectric Point (pI)

40.75

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000036)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G57630 AT1G72930 AT5G38344
fragaria_vesca FvH4_1g27020 FvH4_2g00931 FvH4_2g17330 FvH4_2g17330 FvH4_2g17340 FvH4_2g17350 FvH4_2g20690 FvH4_5g15301 FvH4_5g34194 FvH4_5g38530 FvH4_5g38740 FvH4_5g38740 FvH4_5g38740 FvH4_6g03800 FvH4_7g09791 FvH4_7g09800 FvH4_7g09800 FvH4_7g10510 FvH4_7g10520 FvH4_7g10520 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750
malus_domestica MD02G1217100.v1.1 MD02G1217200.v1.1 MD02G1217400.v1.1 MD02G1217600.v1.1 MD02G1264800.v1.1 MD02G1264900.v1.1 MD02G1302100.v1.1 MD04G1010700.v1.1 MD05G1006800.v1.1 MD05G1140100.v1.1 MD05G1140200.v1.1 MD05G1152200.v1.1 MD07G1073500.v1.1 MD07G1101700.v1.1 MD07G1102200.v1.1 MD07G1103200.v1.1 MD07G1112300.v1.1 MD08G1018200.v1.1 MD08G1018400.v1.1 MD08G1018800.v1.1 MD08G1019000.v1.1 MD08G1019100.v1.1 MD08G1019200.v1.1 MD08G1019300.v1.1 MD08G1019400.v1.1 MD08G1019600.v1.1 MD08G1019900.v1.1 MD08G1020000.v1.1 MD08G1020200.v1.1 MD08G1020500.v1.1 MD08G1020700.v1.1 MD08G1020800.v1.1 MD08G1040700.v1.1 MD11G1112400.v1.1 MD12G1068600.v1.1 MD12G1193200.v1.1 MD13G1050600.v1.1 MD15G1374900.v1.1 MD15G1375100.v1.1 MD15G1416500.v1.1 MD17G1072500.v1.1 MD17G1274200.v1.1 MD17G1274900.v1.1
prunus_persica Prupe.2G121000_v2.0.a1 Prupe.2G121000_v2.0.a1 Prupe.2G125800_v2.0.a1 Prupe.2G126000_v2.0.a1 Prupe.2G126100_v2.0.a1 Prupe.2G126200_v2.0.a1 Prupe.2G126300_v2.0.a1 Prupe.2G126400_v2.0.a1 Prupe.2G126500_v2.0.a1 Prupe.2G126600_v2.0.a1 Prupe.2G126700_v2.0.a1 Prupe.2G126700_v2.0.a1 Prupe.2G126800_v2.0.a1 Prupe.2G126900_v2.0.a1 Prupe.2G127000_v2.0.a1 Prupe.2G127000_v2.0.a1 Prupe.2G127000_v2.0.a1 Prupe.2G127000_v2.0.a1 Prupe.2G135500_v2.0.a1 Prupe.2G135600_v2.0.a1 Prupe.2G135700_v2.0.a1 Prupe.2G135700_v2.0.a1 Prupe.3G009800_v2.0.a1 Prupe.3G010200_v2.0.a1 Prupe.3G131000_v2.0.a1 Prupe.4G260800_v2.0.a1 Prupe.4G260900_v2.0.a1 Prupe.6G083100_v2.0.a1 Prupe.6G083200_v2.0.a1 Prupe.6G083400_v2.0.a1 Prupe.6G132100_v2.0.a1 Prupe.8G184900_v2.0.a1 Prupe.8G185200_v2.0.a1 Prupe.8G185300_v2.0.a1
pyrus_communis pycom02g17870 pycom02g17880 pycom02g19520 pycom02g22610 pycom02g22630 pycom02g22680 pycom05g13540 pycom05g14680 pycom07g04880 pycom07g04890 pycom07g05690 pycom07g05710 pycom07g05720 pycom07g05750 pycom07g05780 pycom07g06300 pycom07g08320 pycom07g08330 pycom07g08350 pycom07g08360 pycom07g08370 pycom07g08410 pycom07g08420 pycom07g08430 pycom07g08440 pycom07g08470 pycom07g08480 pycom07g08520 pycom07g08550 pycom07g08560 pycom07g08640 pycom07g08660 pycom07g08670 pycom07g08680 pycom07g08690 pycom07g08720 pycom07g08730 pycom07g08790 pycom07g08800 pycom07g08810 pycom07g08860 pycom07g08890 pycom07g09720 pycom08g01590 pycom08g01600 pycom08g01620 pycom08g01630 pycom08g01640 pycom10g12630 pycom15g16490 pycom17g07200 pycom17g07210 pycom17g07220 pycom17g11730 pycom17g11740 pycom17g27340 pycom17g27380
rosa_chinensis RchiOBHm_Chr1g0342571 RchiOBHm_Chr1g0346231 RchiOBHm_Chr1g0346831 RchiOBHm_Chr1g0346891 RchiOBHm_Chr1g0348311 RchiOBHm_Chr1g0348321 RchiOBHm_Chr1g0348331 RchiOBHm_Chr1g0348361 RchiOBHm_Chr1g0348371 RchiOBHm_Chr1g0348381 RchiOBHm_Chr1g0348401 RchiOBHm_Chr1g0348411 RchiOBHm_Chr1g0348421 RchiOBHm_Chr1g0348431 RchiOBHm_Chr2g0130881 RchiOBHm_Chr3g0487331 RchiOBHm_Chr5g0060371 RchiOBHm_Chr6g0246491 RchiOBHm_Chr6g0246871 RchiOBHm_Chr6g0250311 RchiOBHm_Chr6g0250781 RchiOBHm_Chr6g0251431 RchiOBHm_Chr6g0281871 RchiOBHm_Chr6g0281881 RchiOBHm_Chr6g0281931 RchiOBHm_Chr6g0281941 RchiOBHm_Chr6g0281951 RchiOBHm_Chr6g0281971 RchiOBHm_Chr6g0281981 RchiOBHm_Chr7g0240541 RchiOBHm_Chr7g0240631 RchiOBHm_Chr7g0240671
rosa_laevigata RLG00000000627 RLG00000000631 RLG00000000641 RLG00000000645 RLG00000000652 RLG00000000662 RLG00000000663 RLG00000000667 RLG00000000670 RLG00000000702 RLG00000001216 RLG00000001219 RLG00000007678 RLG00000012923 RLG00000012996 RLG00000013243 RLG00000017513 RLG00000017514 RLG00000020936 RLG00000022755 RLG00000023013 RLG00000028646 RLG00000028654 RLG00000028662 RLG00000028665 RLG00000028667 RLG00000028711 RLG00000028714 RLG00000028716 RLG00000028770 RLG00000028771 RLG00000028773 RLG00000028778 RLG00000028798 RLG00000028809 RLG00000028813 RLG00000029334 RLG00000030003 RLG00000033910 RLG00000034358 RLG00000035430
rosa_multiflora Rmu_co8031134.1_g000001 Rmu_co8092796.1_g000001 Rmu_co8130156.1_g000001 Rmu_co8325323.1_g000001 Rmu_co8424083.1_g000002 Rmu_sc0000008.1_g000003 Rmu_sc0000008.1_g000011 Rmu_sc0000008.1_g000015 Rmu_sc0000008.1_g000020 Rmu_sc0000091.1_g000015 Rmu_sc0000091.1_g000018 Rmu_sc0000091.1_g000029 Rmu_sc0000091.1_g000031 Rmu_sc0000391.1_g000004 Rmu_sc0001070.1_g000030 Rmu_sc0001293.1_g000016 Rmu_sc0001674.1_g000006 Rmu_sc0001731.1_g000002 Rmu_sc0001731.1_g000003 Rmu_sc0001731.1_g000005 Rmu_sc0001911.1_g000029 Rmu_sc0001913.1_g000038 Rmu_sc0001955.1_g000025 Rmu_sc0001992.1_g000022 Rmu_sc0001992.1_g000028 Rmu_sc0001992.1_g000031 Rmu_sc0002517.1_g000013 Rmu_sc0002517.1_g000017 Rmu_sc0002551.1_g000022 Rmu_sc0002551.1_g000029 Rmu_sc0002551.1_g000038 Rmu_sc0002705.1_g000015 Rmu_sc0002705.1_g000016 Rmu_sc0002882.1_g000055 Rmu_sc0003232.1_g000027 Rmu_sc0003363.1_g000037 Rmu_sc0003600.1_g000054 Rmu_sc0003918.1_g000011 Rmu_sc0004395.1_g000011 Rmu_sc0005071.1_g000004 Rmu_sc0005255.1_g000018 Rmu_sc0005327.1_g000004 Rmu_sc0005597.1_g000007 Rmu_sc0007060.1_g000007 Rmu_sc0007310.1_g000003 Rmu_sc0007383.1_g000014 Rmu_sc0007799.1_g000003 Rmu_sc0008477.1_g000016 Rmu_sc0010151.1_g000009 Rmu_sc0011217.1_g000005 Rmu_sc0016269.1_g000006 Rmu_sc0021495.1_g000001 Rmu_sc0027364.1_g000001 Rmu_sc0029432.1_g000001 Rmu_sc0041386.1_g000001 Rmu_ssc0000126.1_g000023 Rmu_ssc0000126.1_g000027
rosa_roxburghii Rroxscaffold_1G00006130 Rroxscaffold_1G00023320 Rroxscaffold_1G00038770 Rroxscaffold_2G00119800 Rroxscaffold_2G00121860 Rroxscaffold_3G00219780 Rroxscaffold_3G00219890 Rroxscaffold_4G00306740 Rroxscaffold_4G00306820 Rroxscaffold_4G00307000 Rroxscaffold_4G00307010 Rroxscaffold_4G00307020 Rroxscaffold_4G00308030 Rroxscaffold_4G00308070 Rroxscaffold_4G00308450 Rroxscaffold_4G00308460 Rroxscaffold_4G00315320 Rroxscaffold_5G00352470 Rroxscaffold_5G00371420 Rroxscaffold_6G00392300 Rroxscaffold_6G00394870 Rroxscaffold_6G00394890 Rroxscaffold_7G00186700 Rroxscaffold_7G00194980 Rroxscaffold_7G00216840
rosa_rugosa Rorug01G0076100 Rorug01G0128100 Rorug01G0149000.1 Rorug01G0149500.1 Rorug01G0180000 Rorug01G0180100 Rorug01G0182900 Rorug01G0184000 Rorug01G0184100 Rorug01G0184300 Rorug01G0184600 Rorug01G0184700 Rorug01G0184700 Rorug01G0184900 Rorug01G0185000 Rorug01G0185100 Rorug01G0189300 Rorug01G0194100 Rorug01G0194100 Rorug01G0194200 Rorug01G0194400 Rorug01G0194400 Rorug01G0194500 Rorug02G0090400 Rorug02G0090400 Rorug03G0233000 Rorug03G0233100 Rorug05G0178600 Rorug05G0178700 Rorug05G0579200 Rorug06G0144100 Rorug06G0144300 Rorug06G0144300 Rorug06G0179300 Rorug06G0208800 Rorug07G0323500 Rorug07G0337000
rosa_samantha Rh1AG046100 Rh1AG201400 Rh1AG201800 Rh1AG202100 Rh1AG202600 Rh1AG211500 Rh1AG211800 Rh1AG212200 Rh1AG212500 Rh1AG212600 Rh1AG214200 Rh1BG168000 Rh1BG168300 Rh1BG168500 Rh1BG177900 Rh1BG178200 Rh1BG178300 Rh1BG178800 Rh1BG178900 Rh1CG080900 Rh1CG183300 Rh1CG186300 Rh1CG186700 Rh1CG187000 Rh1CG187300 Rh1CG193400 Rh1CG195800 Rh1CG196000 Rh1CG196100 Rh1CG196400 Rh1CG196500 Rh1CG196800 Rh1CG198800 Rh1CG442600 Rh1DG086200 Rh1DG155400 Rh1DG156200 Rh1DG194000 Rh1DG194300 Rh1DG194900 Rh1DG197000 Rh1DG198800 Rh1DG199000 Rh1DG199200 Rh1DG202000 Rh1DG203900 Rh1DG207600 Rh1DG207900 Rh1DG208000 Rh1DG208500 Rh1DG208600 Rh1DG208700 Rh3CG339100 Rh5AG106500 Rh5AG264800 Rh5AG265300 Rh5CG302800 Rh5DG277900 Rh6AG257600 Rh6AG257700 Rh6BG260500 Rh6BG260700 Rh6CG259600 Rh6CG259700 Rh6DG252100 Rh7DG126900
rosa_wichuraiana Rw0G005780 Rw0G007540 Rw0G007550 Rw0G007560 Rw0G009390 Rw1G016900 Rw1G016930 Rw1G016940 Rw1G016970 Rw1G017860 Rw1G017890 Rw1G017900 Rw1G017910 Rw1G017920 Rw1G017960 Rw1G017970 Rw1G017980 Rw1G018150 Rw4G000830 Rw5G009290 Rw5G018950 Rw5G024850 Rw5G024870 Rw5G040460 Rw6G022290 Rw7G041020 Rw7G041200 Rw7G041360 Rw7G041450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 396, 1553
AatII GACGTC 1 cut(s) 618
AccB1I GGYRCC 1 cut(s) 2118
AccI GTMKAC 1 cut(s) 1210
AccII CGCG 1 cut(s) 809
AciI CCGC 1 cut(s) 413
AclWI GGATC 5 cut(s) 757, 838, 899, 1677, 2044
AcoI YGGCCR 1 cut(s) 418
AcsI RAATTY 4 cut(s) 13, 360, 593, 2320
AcuI CTGAAG 2 cut(s) 613, 2165
AcvI CACGTG 1 cut(s) 916
AcyI GRCGYC 3 cut(s) 615, 958, 2119
AfaI GTAC 6 cut(s) 1134, 1509, 1713, 2142, 2161, 2298
AfiI CCNNNNNNNGG 5 cut(s) 217, 918, 1682, 1882, 2059
AflII CTTAAG 1 cut(s) 2431
AflIII ACRYGT 2 cut(s) 807, 1261
AhdI GACNNNNNGTC 1 cut(s) 442
AjnI CCWGG 4 cut(s) 745, 815, 1665, 2184
Alw21I GWGCWC 1 cut(s) 1605
Alw26I GTCTC 3 cut(s) 480, 702, 2225
Alw44I GTGCAC 1 cut(s) 1601
AlwI GGATC 5 cut(s) 757, 838, 899, 1677, 2044
AoxI GGCC 1 cut(s) 418
ApaLI GTGCAC 1 cut(s) 1601
ApeKI GCWGC 1 cut(s) 338
ApoI RAATTY 4 cut(s) 13, 360, 593, 2320
ArsI GACNNNNNNTTYG 2 cut(s) 1146, 1178
AspLEI GCGC 1 cut(s) 2121
AspS9I GGNCC 4 cut(s) 138, 871, 1483, 1492
AsuC2I CCSGG 2 cut(s) 1536, 1883
AsuHPI GGTGA 2 cut(s) 1838, 2020
AsuII TTCGAA 3 cut(s) 113, 797, 2136
AvaII GGWCC 4 cut(s) 138, 871, 1483, 1492
BaeGI GKGCMC 1 cut(s) 1605
BanI GGYRCC 1 cut(s) 2118
BarI GAAGNNNNNNTAC 2 cut(s) 1386, 1418
BauI CACGAG 1 cut(s) 554
BbrPI CACGTG 1 cut(s) 916
BbsI GAAGAC 6 cut(s) 610, 645, 866, 883, 1250, 1749
Bbv12I GWGCWC 1 cut(s) 1605
BbvI GCAGC 1 cut(s) 350
BccI CCATC 7 cut(s) 987, 1049, 1946, 2012, 2292, 2300, 2334
BcgI CGANNNNNNTGC 2 cut(s) 1643, 1677
BciT130I CCWGG 4 cut(s) 747, 817, 1667, 2186
BcnI CCSGG 2 cut(s) 1536, 1883
BcoDI GTCTC 3 cut(s) 480, 702, 2225
BfaI CTAG 9 cut(s) 335, 410, 504, 954, 1025, 1452, 1511, 1560, 2469
BfmI CTRYAG 1 cut(s) 301
BfoI RGCGCY 1 cut(s) 2122
BfrI CTTAAG 1 cut(s) 2431
BisI GCNGC 1 cut(s) 339
BlsI GCNGC 1 cut(s) 340
BmcAI AGTACT 2 cut(s) 1509, 2142
Bme1390I CCNGG 6 cut(s) 747, 817, 1536, 1667, 1883, 2186
Bme18I GGWCC 4 cut(s) 138, 871, 1483, 1492
BmeRI GACNNNNNGTC 1 cut(s) 442
BmgT120I GGNCC 4 cut(s) 138, 871, 1483, 1492
BmiI GGNNCC 3 cut(s) 140, 574, 2120
BmrFI CCNGG 6 cut(s) 747, 817, 1536, 1667, 1883, 2186
BmsI GCATC 5 cut(s) 509, 1492, 2012, 2209, 2253
BpiI GAAGAC 6 cut(s) 610, 645, 866, 883, 1250, 1749
Bpu14I TTCGAA 3 cut(s) 113, 797, 2136
BpuEI CTTGAG 4 cut(s) 552, 643, 743, 1143
BpuMI CCSGG 2 cut(s) 1536, 1883
Bsa29I ATCGAT 2 cut(s) 1192, 1995
BsaAI YACGTR 1 cut(s) 916
BsaBI GATNNNNATC 1 cut(s) 903
BsaHI GRCGYC 3 cut(s) 615, 958, 2119
BsaI GGTCTC 1 cut(s) 2225
BsaJI CCNNGG 2 cut(s) 867, 2184
BsaXI ACNNNNNCTCC 2 cut(s) 2265, 2295
Bsc4I CCNNNNNNNGG 5 cut(s) 217, 918, 1682, 1882, 2059
Bse1I ACTGG 4 cut(s) 514, 887, 1218, 2307
Bse3DI GCAATG 4 cut(s) 376, 495, 1251, 1899
Bse8I GATNNNNATC 1 cut(s) 903
BseBI CCWGG 4 cut(s) 747, 817, 1667, 2186
BseCI ATCGAT 2 cut(s) 1192, 1995
BseDI CCNNGG 2 cut(s) 867, 2184
BseGI GGATG 9 cut(s) 226, 812, 998, 1672, 1961, 2027, 2268, 2311, 2315
BseJI GATNNNNATC 1 cut(s) 903
BseLI CCNNNNNNNGG 5 cut(s) 217, 918, 1682, 1882, 2059
BseMI GCAATG 4 cut(s) 376, 495, 1251, 1899
BseNI ACTGG 4 cut(s) 514, 887, 1218, 2307
BseRI GAGGAG 2 cut(s) 568, 744
BseSI GKGCMC 1 cut(s) 1605
BseXI GCAGC 1 cut(s) 350
Bsh1236I CGCG 1 cut(s) 809
Bsh1285I CGRYCG 1 cut(s) 417
BshFI GGCC 1 cut(s) 420
BshNI GGYRCC 1 cut(s) 2118
BshVI ATCGAT 2 cut(s) 1192, 1995
BsiEI CGRYCG 1 cut(s) 417
BsiHKAI GWGCWC 1 cut(s) 1605
BsiSI CCGG 3 cut(s) 977, 1535, 1882
BslFI GGGAC 2 cut(s) 895, 1434
BslI CCNNNNNNNGG 5 cut(s) 217, 918, 1682, 1882, 2059
BsmAI GTCTC 3 cut(s) 480, 702, 2225
BsmBI CGTCTC 1 cut(s) 702
BsmFI GGGAC 2 cut(s) 895, 1434
BsmI GAATGC 1 cut(s) 1980
BsnI GGCC 1 cut(s) 420
Bso31I GGTCTC 1 cut(s) 2225
Bsp119I TTCGAA 3 cut(s) 113, 797, 2136
Bsp1286I GDGCHC 1 cut(s) 1605
Bsp1407I TGTACA 1 cut(s) 1711
Bsp143I GATC 9 cut(s) 762, 843, 904, 1189, 1193, 1522, 1669, 2049, 2383
BspACI CCGC 1 cut(s) 413
BspANI GGCC 1 cut(s) 420
BspDI ATCGAT 2 cut(s) 1192, 1995
BspFNI CGCG 1 cut(s) 809
BspHI TCATGA 1 cut(s) 1833
BspLI GGNNCC 3 cut(s) 140, 574, 2120
BspPI GGATC 5 cut(s) 757, 838, 899, 1677, 2044
BspT104I TTCGAA 3 cut(s) 113, 797, 2136
BspT107I GGYRCC 1 cut(s) 2118
BspTI CTTAAG 1 cut(s) 2431
BspTNI GGTCTC 1 cut(s) 2225
BsrDI GCAATG 4 cut(s) 376, 495, 1251, 1899
BsrGI TGTACA 1 cut(s) 1711
BsrI ACTGG 4 cut(s) 514, 887, 1218, 2307
BssECI CCNNGG 2 cut(s) 867, 2184
BssMI GATC 9 cut(s) 762, 843, 904, 1189, 1193, 1522, 1669, 2049, 2383
BssNAI GTATAC 1 cut(s) 1211
BssNI GRCGYC 3 cut(s) 615, 958, 2119
BssSI CACGAG 1 cut(s) 554
Bst1107I GTATAC 1 cut(s) 1211
Bst2BI CACGAG 1 cut(s) 554
Bst2UI CCWGG 4 cut(s) 747, 817, 1667, 2186
Bst4CI ACNGT 2 cut(s) 2014, 2236
Bst6I CTCTTC 4 cut(s) 28, 115, 1450, 2059
BstACI GRCGYC 3 cut(s) 615, 958, 2119
BstAFI CTTAAG 1 cut(s) 2431
BstAPI GCANNNNNTGC 1 cut(s) 1016
BstAUI TGTACA 1 cut(s) 1711
BstBAI YACGTR 1 cut(s) 916
BstBI TTCGAA 3 cut(s) 113, 797, 2136
BstC8I GCNNGC 4 cut(s) 132, 343, 1030, 1656
BstDEI CTNAG 5 cut(s) 1345, 1424, 1679, 1844, 2288
BstEII GGTNACC 1 cut(s) 602
BstF5I GGATG 9 cut(s) 226, 812, 998, 1672, 1961, 2027, 2268, 2311, 2315
BstFNI CGCG 1 cut(s) 809
BstH2I RGCGCY 1 cut(s) 2122
BstHHI GCGC 1 cut(s) 2121
BstKTI GATC 9 cut(s) 765, 846, 907, 1192, 1196, 1525, 1672, 2052, 2386
BstMAI GTCTC 3 cut(s) 480, 702, 2225
BstMBI GATC 9 cut(s) 762, 843, 904, 1189, 1193, 1522, 1669, 2049, 2383
BstMCI CGRYCG 1 cut(s) 417
BstMWI GCNNNNNNNGC 5 cut(s) 347, 633, 751, 1016, 1025
BstNI CCWGG 4 cut(s) 747, 817, 1667, 2186
BstNSI RCATGY 3 cut(s) 1231, 1265, 1658
BstPI GGTNACC 1 cut(s) 602
BstSCI CCNGG 6 cut(s) 745, 815, 1534, 1665, 1881, 2184
BstSFI CTRYAG 1 cut(s) 301
BstSLI GKGCMC 1 cut(s) 1605
BstUI CGCG 1 cut(s) 809
BstV1I GCAGC 1 cut(s) 350
BstV2I GAAGAC 6 cut(s) 610, 645, 866, 883, 1250, 1749
BstXI CCANNNNNNTGG 1 cut(s) 547
BstZ17I GTATAC 1 cut(s) 1211
Bsu15I ATCGAT 2 cut(s) 1192, 1995
BsuRI GGCC 1 cut(s) 420
BsuTUI ATCGAT 2 cut(s) 1192, 1995
BtsCI GGATG 9 cut(s) 226, 812, 998, 1672, 1961, 2027, 2268, 2311, 2315
Cac8I GCNNGC 4 cut(s) 132, 343, 1030, 1656
CciI TCATGA 1 cut(s) 1833
CfoI GCGC 1 cut(s) 2121
Cfr13I GGNCC 4 cut(s) 138, 871, 1483, 1492
ClaI ATCGAT 2 cut(s) 1192, 1995
CseI GACGC 2 cut(s) 798, 966
Csp6I GTAC 6 cut(s) 1133, 1508, 1712, 2141, 2160, 2297
CspCI CAANNNNNGTGG 2 cut(s) 1886, 1921
CviQI GTAC 6 cut(s) 1133, 1508, 1712, 2141, 2160, 2297
DdeI CTNAG 5 cut(s) 1345, 1424, 1679, 1844, 2288
DinI GGCGCC 1 cut(s) 2120
DpnI GATC 9 cut(s) 764, 845, 906, 1191, 1195, 1524, 1671, 2051, 2385
DpnII GATC 9 cut(s) 762, 843, 904, 1189, 1193, 1522, 1669, 2049, 2383
DraI TTTAAA 1 cut(s) 429
DriI GACNNNNNGTC 1 cut(s) 442
EaeI YGGCCR 1 cut(s) 418
Eam1104I CTCTTC 4 cut(s) 28, 115, 1450, 2059
Eam1105I GACNNNNNGTC 1 cut(s) 442
EarI CTCTTC 4 cut(s) 28, 115, 1450, 2059
Eco31I GGTCTC 1 cut(s) 2225
Eco32I GATATC 1 cut(s) 230
Eco47I GGWCC 4 cut(s) 138, 871, 1483, 1492
Eco57I CTGAAG 2 cut(s) 613, 2165
Eco72I CACGTG 1 cut(s) 916
Eco91I GGTNACC 1 cut(s) 602
EcoO109I RGGNCCY 1 cut(s) 138
EcoO65I GGTNACC 1 cut(s) 602
EcoRI GAATTC 1 cut(s) 13
EcoRII CCWGG 4 cut(s) 745, 815, 1665, 2184
EcoRV GATATC 1 cut(s) 230
EcoT22I ATGCAT 4 cut(s) 376, 2043, 2202, 2254
EgeI GGCGCC 1 cut(s) 2120
EheI GGCGCC 1 cut(s) 2120
Esp3I CGTCTC 1 cut(s) 702
FalI AAGNNNNNCTT 2 cut(s) 422, 454
FaqI GGGAC 2 cut(s) 895, 1434
FauNDI CATATG 1 cut(s) 1488
FblI GTMKAC 1 cut(s) 1210
Fnu4HI GCNGC 1 cut(s) 339
FokI GGATG 9 cut(s) 233, 799, 1005, 1659, 1968, 2034, 2275, 2318, 2322
Fsp4HI GCNGC 1 cut(s) 339
FspBI CTAG 9 cut(s) 335, 410, 504, 954, 1025, 1452, 1511, 1560, 2469
GlaI GCGC 1 cut(s) 2120
GluI GCNGC 1 cut(s) 339
HaeII RGCGCY 1 cut(s) 2122
HaeIII GGCC 1 cut(s) 420
HapII CCGG 3 cut(s) 977, 1535, 1882
HgaI GACGC 2 cut(s) 798, 966
HhaI GCGC 1 cut(s) 2121
Hin1I GRCGYC 3 cut(s) 615, 958, 2119
Hin6I GCGC 1 cut(s) 2119
HinP1I GCGC 1 cut(s) 2119
HindIII AAGCTT 1 cut(s) 1285
HpaII CCGG 3 cut(s) 977, 1535, 1882
HphI GGTGA 2 cut(s) 1838, 2020
Hpy166II GTNNAC 6 cut(s) 1211, 1267, 1483, 1603, 1714, 2162
Hpy188I TCNGA 4 cut(s) 227, 583, 632, 871
Hpy8I GTNNAC 6 cut(s) 1211, 1267, 1483, 1603, 1714, 2162
Hpy99I CGWCG 3 cut(s) 617, 716, 1727
HpyAV CCTTC 4 cut(s) 994, 1286, 1914, 2140
HpyCH4III ACNGT 2 cut(s) 2014, 2236
HpyCH4IV ACGT 5 cut(s) 120, 615, 701, 915, 2104
HpyF10VI GCNNNNNNNGC 5 cut(s) 347, 633, 751, 1016, 1025
HpyF3I CTNAG 5 cut(s) 1345, 1424, 1679, 1844, 2288
HpySE526I ACGT 5 cut(s) 120, 615, 701, 915, 2104
Hsp92I GRCGYC 3 cut(s) 615, 958, 2119
HspAI GCGC 1 cut(s) 2119
KasI GGCGCC 1 cut(s) 2118
Kzo9I GATC 9 cut(s) 762, 843, 904, 1189, 1193, 1522, 1669, 2049, 2383
Lsp1109I GCAGC 1 cut(s) 350
LweI GCATC 5 cut(s) 509, 1492, 2012, 2209, 2253
MaeI CTAG 9 cut(s) 335, 410, 504, 954, 1025, 1452, 1511, 1560, 2469
MaeII ACGT 5 cut(s) 120, 615, 701, 915, 2104
MaeIII GTNAC 9 cut(s) 556, 602, 771, 1182, 1591, 1685, 2008, 2054, 2462
MalI GATC 9 cut(s) 764, 845, 906, 1191, 1195, 1524, 1671, 2051, 2385
MboI GATC 9 cut(s) 762, 843, 904, 1189, 1193, 1522, 1669, 2049, 2383
MfeI CAATTG 1 cut(s) 1971
MhlI GDGCHC 1 cut(s) 1605
MluI ACGCGT 1 cut(s) 807
Mly113I GGCGCC 1 cut(s) 2119
MlyI GAGTC 5 cut(s) 319, 1073, 1158, 1640, 2102
MmeI TCCRAC 2 cut(s) 919, 1591
Mph1103I ATGCAT 4 cut(s) 376, 2043, 2202, 2254
MseI TTAA 8 cut(s) 200, 269, 353, 428, 468, 1109, 2336, 2432
MslI CAYNNNNRTG 2 cut(s) 545, 817
MspA1I CMGCKG 1 cut(s) 769
MspCI CTTAAG 1 cut(s) 2431
MspI CCGG 3 cut(s) 977, 1535, 1882
MspR9I CCNGG 6 cut(s) 747, 817, 1536, 1667, 1883, 2186
MunI CAATTG 1 cut(s) 1971
Mva1269I GAATGC 1 cut(s) 1980
MvaI CCWGG 4 cut(s) 747, 817, 1667, 2186
MvnI CGCG 1 cut(s) 809
MwoI GCNNNNNNNGC 5 cut(s) 347, 633, 751, 1016, 1025
NarI GGCGCC 1 cut(s) 2119
NciI CCSGG 2 cut(s) 1536, 1883
NdeI CATATG 1 cut(s) 1488
NdeII GATC 9 cut(s) 762, 843, 904, 1189, 1193, 1522, 1669, 2049, 2383
NlaIV GGNNCC 3 cut(s) 140, 574, 2120
NmuCI GTSAC 4 cut(s) 556, 771, 2008, 2054
NsiI ATGCAT 4 cut(s) 376, 2043, 2202, 2254
NspI RCATGY 3 cut(s) 1231, 1265, 1658
NspV TTCGAA 3 cut(s) 113, 797, 2136
PaeI GCATGC 1 cut(s) 1658
PagI TCATGA 1 cut(s) 1833
PciI ACATGT 1 cut(s) 1261
PcsI WCGNNNNNNNCGW 1 cut(s) 604
PctI GAATGC 1 cut(s) 1980
PfeI GAWTC 5 cut(s) 584, 1154, 2084, 2129, 2369
PfoI TCCNGGA 1 cut(s) 1534
PkrI GCNGC 1 cut(s) 340
PleI GAGTC 5 cut(s) 319, 1072, 1157, 1639, 2101
PluTI GGCGCC 1 cut(s) 2122
PmaCI CACGTG 1 cut(s) 916
PmlI CACGTG 1 cut(s) 916
PpsI GAGTC 5 cut(s) 319, 1072, 1157, 1639, 2101
Ppu21I YACGTR 1 cut(s) 916
PpuMI RGGWCCY 1 cut(s) 138
PscI ACATGT 1 cut(s) 1261
PsiI TTATAA 2 cut(s) 396, 1553
Psp5II RGGWCCY 1 cut(s) 138
Psp6I CCWGG 4 cut(s) 745, 815, 1665, 2184
PspCI CACGTG 1 cut(s) 916
PspEI GGTNACC 1 cut(s) 602
PspGI CCWGG 4 cut(s) 745, 815, 1665, 2184
PspN4I GGNNCC 3 cut(s) 140, 574, 2120
PspPI GGNCC 4 cut(s) 138, 871, 1483, 1492
PspPPI RGGWCCY 1 cut(s) 138
PvuII CAGCTG 1 cut(s) 769
RsaI GTAC 6 cut(s) 1134, 1509, 1713, 2142, 2161, 2298
RsaNI GTAC 6 cut(s) 1133, 1508, 1712, 2141, 2160, 2297
RseI CAYNNNNRTG 2 cut(s) 545, 817
SaqAI TTAA 8 cut(s) 200, 269, 353, 428, 468, 1109, 2336, 2432
SatI GCNGC 1 cut(s) 339
Sau3AI GATC 9 cut(s) 762, 843, 904, 1189, 1193, 1522, 1669, 2049, 2383
Sau96I GGNCC 4 cut(s) 138, 871, 1483, 1492
ScaI AGTACT 2 cut(s) 1509, 2142
SchI GAGTC 5 cut(s) 319, 1073, 1158, 1640, 2102
ScrFI CCNGG 6 cut(s) 747, 817, 1536, 1667, 1883, 2186
SduI GDGCHC 1 cut(s) 1605
SfaNI GCATC 5 cut(s) 509, 1492, 2012, 2209, 2253
SfcI CTRYAG 1 cut(s) 301
SfoI GGCGCC 1 cut(s) 2120
SfuI TTCGAA 3 cut(s) 113, 797, 2136
SinI GGWCC 4 cut(s) 138, 871, 1483, 1492
SmiMI CAYNNNNRTG 2 cut(s) 545, 817
SmlI CTYRAG 5 cut(s) 567, 622, 722, 1158, 2431
SmoI CTYRAG 5 cut(s) 567, 622, 722, 1158, 2431
SphI GCATGC 1 cut(s) 1658
SsiI CCGC 1 cut(s) 413
SspDI GGCGCC 1 cut(s) 2118
SspI AATATT 1 cut(s) 1697
SspMI CTAG 9 cut(s) 335, 410, 504, 954, 1025, 1452, 1511, 1560, 2469
StyD4I CCNGG 6 cut(s) 745, 815, 1534, 1665, 1881, 2184
TaaI ACNGT 2 cut(s) 2014, 2236
TaiI ACGT 5 cut(s) 123, 618, 704, 918, 2107
TatI WGTACW 3 cut(s) 1507, 1711, 2140
TfiI GAWTC 5 cut(s) 584, 1154, 2084, 2129, 2369
Tru1I TTAA 8 cut(s) 200, 269, 353, 428, 468, 1109, 2336, 2432
Tru9I TTAA 8 cut(s) 200, 269, 353, 428, 468, 1109, 2336, 2432
TseFI GTSAC 4 cut(s) 556, 771, 2008, 2054
TseI GCWGC 1 cut(s) 338
Tsp45I GTSAC 4 cut(s) 556, 771, 2008, 2054
TspDTI ATGAA 7 cut(s) 26, 79, 732, 1294, 1532, 1850, 2472
TspGWI ACGGA 4 cut(s) 868, 897, 1740, 2042
Vha464I CTTAAG 1 cut(s) 2431
VneI GTGCAC 1 cut(s) 1601
VpaK11BI GGWCC 4 cut(s) 138, 871, 1483, 1492
XapI RAATTY 4 cut(s) 13, 360, 593, 2320
XbaI TCTAGA 1 cut(s) 1451
XceI RCATGY 3 cut(s) 1231, 1265, 1658
XmiI GTMKAC 1 cut(s) 1210
XspI CTAG 9 cut(s) 335, 410, 504, 954, 1025, 1452, 1511, 1560, 2469
ZraI GACGTC 1 cut(s) 616
ZrmI AGTACT 2 cut(s) 1509, 2142
Zsp2I ATGCAT 4 cut(s) 376, 2043, 2202, 2254
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.