TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Dimer_Tnp_hAT | PF05699 | 243 - 305 | 1.4e-12 | hAT family C-terminal dimerisation region |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 807 |
| AclWI | GGATC | 2 cut(s) | 220, 461 |
| AcsI | RAATTY | 2 cut(s) | 271, 297 |
| AgeI | ACCGGT | 1 cut(s) | 790 |
| AjnI | CCWGG | 1 cut(s) | 30 |
| AluBI | AGCT | 3 cut(s) | 118, 449, 655 |
| AluI | AGCT | 3 cut(s) | 118, 449, 655 |
| Alw26I | GTCTC | 1 cut(s) | 498 |
| AlwI | GGATC | 2 cut(s) | 220, 461 |
| AoxI | GGCC | 1 cut(s) | 698 |
| ApoI | RAATTY | 2 cut(s) | 271, 297 |
| AsiGI | ACCGGT | 1 cut(s) | 790 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 195, 820 |
| AspS9I | GGNCC | 1 cut(s) | 524 |
| AsuHPI | GGTGA | 3 cut(s) | 371, 626, 805 |
| AsuII | TTCGAA | 1 cut(s) | 598 |
| AvaII | GGWCC | 1 cut(s) | 524 |
| AxyI | CCTNAGG | 1 cut(s) | 555 |
| BciT130I | CCWGG | 1 cut(s) | 32 |
| BcoDI | GTCTC | 1 cut(s) | 498 |
| BfaI | CTAG | 3 cut(s) | 119, 471, 488 |
| BfmI | CTRYAG | 2 cut(s) | 769, 798 |
| Bme1390I | CCNGG | 1 cut(s) | 32 |
| Bme18I | GGWCC | 1 cut(s) | 524 |
| BmgT120I | GGNCC | 1 cut(s) | 524 |
| BmrFI | CCNGG | 1 cut(s) | 32 |
| BmsI | GCATC | 1 cut(s) | 812 |
| Bpu14I | TTCGAA | 1 cut(s) | 598 |
| BpuEI | CTTGAG | 2 cut(s) | 449, 852 |
| BsaJI | CCNNGG | 1 cut(s) | 701 |
| BsaWI | WCCGGW | 1 cut(s) | 790 |
| Bse118I | RCCGGY | 1 cut(s) | 790 |
| Bse21I | CCTNAGG | 1 cut(s) | 555 |
| BseBI | CCWGG | 1 cut(s) | 32 |
| BseDI | CCNNGG | 1 cut(s) | 701 |
| BseGI | GGATG | 3 cut(s) | 565, 707, 803 |
| BseMII | CTCAG | 2 cut(s) | 165, 576 |
| BshFI | GGCC | 1 cut(s) | 700 |
| BshTI | ACCGGT | 1 cut(s) | 790 |
| BsiSI | CCGG | 1 cut(s) | 791 |
| BsmAI | GTCTC | 1 cut(s) | 498 |
| BsnI | GGCC | 1 cut(s) | 700 |
| Bsp119I | TTCGAA | 1 cut(s) | 598 |
| Bsp143I | GATC | 3 cut(s) | 68, 212, 466 |
| BspACI | CCGC | 1 cut(s) | 807 |
| BspANI | GGCC | 1 cut(s) | 700 |
| BspCNI | CTCAG | 2 cut(s) | 164, 577 |
| BspPI | GGATC | 2 cut(s) | 220, 461 |
| BspT104I | TTCGAA | 1 cut(s) | 598 |
| BsrFI | RCCGGY | 1 cut(s) | 790 |
| BssAI | RCCGGY | 1 cut(s) | 790 |
| BssECI | CCNNGG | 1 cut(s) | 701 |
| BssMI | GATC | 3 cut(s) | 68, 212, 466 |
| BssT1I | CCWWGG | 1 cut(s) | 701 |
| Bst2UI | CCWGG | 1 cut(s) | 32 |
| Bst4CI | ACNGT | 1 cut(s) | 799 |
| BstBI | TTCGAA | 1 cut(s) | 598 |
| BstDEI | CTNAG | 3 cut(s) | 151, 555, 585 |
| BstF5I | GGATG | 3 cut(s) | 565, 707, 803 |
| BstKTI | GATC | 3 cut(s) | 71, 215, 469 |
| BstMAI | GTCTC | 1 cut(s) | 498 |
| BstMBI | GATC | 3 cut(s) | 68, 212, 466 |
| BstNI | CCWGG | 1 cut(s) | 32 |
| BstSCI | CCNGG | 1 cut(s) | 30 |
| BstSFI | CTRYAG | 2 cut(s) | 769, 798 |
| BstX2I | RGATCY | 1 cut(s) | 212 |
| BstYI | RGATCY | 1 cut(s) | 212 |
| Bsu36I | CCTNAGG | 1 cut(s) | 555 |
| BsuRI | GGCC | 1 cut(s) | 700 |
| BtsCI | GGATG | 3 cut(s) | 565, 707, 803 |
| Cfr10I | RCCGGY | 1 cut(s) | 790 |
| Cfr13I | GGNCC | 1 cut(s) | 524 |
| CspAI | ACCGGT | 1 cut(s) | 790 |
| CviAII | CATG | 3 cut(s) | 263, 404, 862 |
| CviJI | RGCY | 4 cut(s) | 118, 449, 655, 700 |
| CviKI_1 | RGCY | 4 cut(s) | 118, 449, 655, 700 |
| DdeI | CTNAG | 3 cut(s) | 151, 555, 585 |
| DpnI | GATC | 3 cut(s) | 70, 214, 468 |
| DpnII | GATC | 3 cut(s) | 68, 212, 466 |
| Eco130I | CCWWGG | 1 cut(s) | 701 |
| Eco147I | AGGCCT | 1 cut(s) | 700 |
| Eco47I | GGWCC | 1 cut(s) | 524 |
| Eco81I | CCTNAGG | 1 cut(s) | 555 |
| EcoO109I | RGGNCCY | 1 cut(s) | 524 |
| EcoRII | CCWGG | 1 cut(s) | 30 |
| EcoT14I | CCWWGG | 1 cut(s) | 701 |
| ErhI | CCWWGG | 1 cut(s) | 701 |
| FaeI | CATG | 3 cut(s) | 266, 407, 865 |
| FatI | CATG | 3 cut(s) | 262, 403, 861 |
| FauNDI | CATATG | 1 cut(s) | 685 |
| FokI | GGATG | 3 cut(s) | 572, 694, 790 |
| FspBI | CTAG | 3 cut(s) | 119, 471, 488 |
| HaeIII | GGCC | 1 cut(s) | 700 |
| HapII | CCGG | 1 cut(s) | 791 |
| Hin1II | CATG | 3 cut(s) | 266, 407, 865 |
| HincII | GTYRAC | 1 cut(s) | 928 |
| HindII | GTYRAC | 1 cut(s) | 928 |
| HinfI | GANTC | 6 cut(s) | 103, 248, 377, 491, 617, 865 |
| HpaII | CCGG | 1 cut(s) | 791 |
| HphI | GGTGA | 3 cut(s) | 371, 626, 805 |
| Hpy166II | GTNNAC | 2 cut(s) | 337, 928 |
| Hpy188I | TCNGA | 6 cut(s) | 73, 141, 327, 382, 586, 855 |
| Hpy188III | TCNNGA | 7 cut(s) | 16, 66, 107, 488, 623, 869, 960 |
| Hpy8I | GTNNAC | 2 cut(s) | 337, 928 |
| HpyAV | CCTTC | 1 cut(s) | 83 |
| HpyCH4III | ACNGT | 1 cut(s) | 799 |
| HpyCH4V | TGCA | 4 cut(s) | 37, 56, 731, 968 |
| HpyF3I | CTNAG | 3 cut(s) | 151, 555, 585 |
| Hsp92II | CATG | 3 cut(s) | 266, 407, 865 |
| Kzo9I | GATC | 3 cut(s) | 68, 212, 466 |
| LpnPI | CCDG | 9 cut(s) | 17, 29, 44, 120, 128, 138, 641, 757, 804 |
| LweI | GCATC | 1 cut(s) | 812 |
| MaeI | CTAG | 3 cut(s) | 119, 471, 488 |
| MaeIII | GTNAC | 3 cut(s) | 232, 371, 793 |
| MalI | GATC | 3 cut(s) | 70, 214, 468 |
| MboI | GATC | 3 cut(s) | 68, 212, 466 |
| MboII | GAAGA | 4 cut(s) | 197, 200, 353, 842 |
| MflI | RGATCY | 1 cut(s) | 212 |
| MlyI | GAGTC | 1 cut(s) | 859 |
| MmeI | TCCRAC | 1 cut(s) | 28 |
| MnlI | CCTC | 4 cut(s) | 147, 325, 592, 673 |
| MroXI | GAANNNNTTC | 2 cut(s) | 195, 820 |
| MseI | TTAA | 1 cut(s) | 896 |
| MslI | CAYNNNNRTG | 1 cut(s) | 306 |
| MspA1I | CMGCKG | 2 cut(s) | 449, 809 |
| MspI | CCGG | 1 cut(s) | 791 |
| MspR9I | CCNGG | 1 cut(s) | 32 |
| MvaI | CCWGG | 1 cut(s) | 32 |
| NdeI | CATATG | 1 cut(s) | 685 |
| NdeII | GATC | 3 cut(s) | 68, 212, 466 |
| NlaIII | CATG | 3 cut(s) | 266, 407, 865 |
| NmuCI | GTSAC | 2 cut(s) | 371, 793 |
| NspV | TTCGAA | 1 cut(s) | 598 |
| PceI | AGGCCT | 1 cut(s) | 700 |
| PdmI | GAANNNNTTC | 2 cut(s) | 195, 820 |
| PfeI | GAWTC | 5 cut(s) | 103, 248, 377, 491, 617 |
| PinAI | ACCGGT | 1 cut(s) | 790 |
| PleI | GAGTC | 1 cut(s) | 859 |
| PpsI | GAGTC | 1 cut(s) | 859 |
| PpuMI | RGGWCCY | 1 cut(s) | 524 |
| Psp5II | RGGWCCY | 1 cut(s) | 524 |
| Psp6I | CCWGG | 1 cut(s) | 30 |
| PspGI | CCWGG | 1 cut(s) | 30 |
| PspPI | GGNCC | 1 cut(s) | 524 |
| PspPPI | RGGWCCY | 1 cut(s) | 524 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 276, 308 |
| PsuI | RGATCY | 1 cut(s) | 212 |
| PvuII | CAGCTG | 1 cut(s) | 449 |
| RseI | CAYNNNNRTG | 1 cut(s) | 306 |
| SaqAI | TTAA | 1 cut(s) | 896 |
| Sau3AI | GATC | 3 cut(s) | 68, 212, 466 |
| Sau96I | GGNCC | 1 cut(s) | 524 |
| SchI | GAGTC | 1 cut(s) | 859 |
| ScrFI | CCNGG | 1 cut(s) | 32 |
| SfaNI | GCATC | 1 cut(s) | 812 |
| SfcI | CTRYAG | 2 cut(s) | 769, 798 |
| SfuI | TTCGAA | 1 cut(s) | 598 |
| SinI | GGWCC | 1 cut(s) | 524 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 306 |
| SmlI | CTYRAG | 2 cut(s) | 428, 867 |
| SmoI | CTYRAG | 2 cut(s) | 428, 867 |
| SseBI | AGGCCT | 1 cut(s) | 700 |
| SsiI | CCGC | 1 cut(s) | 807 |
| SspI | AATATT | 2 cut(s) | 227, 460 |
| SspMI | CTAG | 3 cut(s) | 119, 471, 488 |
| StuI | AGGCCT | 1 cut(s) | 700 |
| StyD4I | CCNGG | 1 cut(s) | 30 |
| StyI | CCWWGG | 1 cut(s) | 701 |
| TaaI | ACNGT | 1 cut(s) | 799 |
| TaqI | TCGA | 2 cut(s) | 67, 598 |
| TfiI | GAWTC | 5 cut(s) | 103, 248, 377, 491, 617 |
| Tru1I | TTAA | 1 cut(s) | 896 |
| Tru9I | TTAA | 1 cut(s) | 896 |
| TseFI | GTSAC | 2 cut(s) | 371, 793 |
| Tsp45I | GTSAC | 2 cut(s) | 371, 793 |
| TspDTI | ATGAA | 7 cut(s) | 297, 381, 405, 423, 438, 576, 702 |
| VpaK11BI | GGWCC | 1 cut(s) | 524 |
| XapI | RAATTY | 2 cut(s) | 271, 297 |
| XbaI | TCTAGA | 1 cut(s) | 487 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 718 |
| XmnI | GAANNNNTTC | 2 cut(s) | 195, 820 |
| XspI | CTAG | 3 cut(s) | 119, 471, 488 |