TMV resistance protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 326 |
| AccB1I | GGYRCC | 2 cut(s) | 212, 891 |
| AccI | GTMKAC | 4 cut(s) | 1732, 1932, 2307, 2388 |
| AciI | CCGC | 2 cut(s) | 498, 1238 |
| AclWI | GGATC | 5 cut(s) | 1243, 1890, 2173, 2378, 2591 |
| AcoI | YGGCCR | 2 cut(s) | 436, 1574 |
| AcsI | RAATTY | 4 cut(s) | 1094, 1554, 1907, 2144 |
| AcuI | CTGAAG | 2 cut(s) | 1243, 2384 |
| AcyI | GRCGYC | 1 cut(s) | 213 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 1668, 1896, 2057, 2096, 2405 |
| AflII | CTTAAG | 1 cut(s) | 1597 |
| AflIII | ACRYGT | 2 cut(s) | 34, 1437 |
| AjnI | CCWGG | 6 cut(s) | 438, 1374, 2031, 2094, 2167, 2398 |
| AleI | CACNNNNGTG | 1 cut(s) | 2187 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1215, 1247 |
| Alw21I | GWGCWC | 4 cut(s) | 378, 571, 2553, 2850 |
| Alw26I | GTCTC | 5 cut(s) | 1533, 1846, 1905, 2091, 2834 |
| Alw44I | GTGCAC | 2 cut(s) | 374, 567 |
| AlwI | GGATC | 5 cut(s) | 1243, 1890, 2173, 2378, 2591 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2101 |
| Ama87I | CYCGRG | 1 cut(s) | 1796 |
| AoxI | GGCC | 3 cut(s) | 436, 1574, 2170 |
| ApaLI | GTGCAC | 2 cut(s) | 374, 567 |
| ApeKI | GCWGC | 1 cut(s) | 2810 |
| ApoI | RAATTY | 4 cut(s) | 1094, 1554, 1907, 2144 |
| AseI | ATTAAT | 1 cut(s) | 2718 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 662, 846, 1323, 2148 |
| AspLEI | GCGC | 1 cut(s) | 215 |
| AspS9I | GGNCC | 4 cut(s) | 256, 265, 442, 2895 |
| AsuC2I | CCSGG | 3 cut(s) | 309, 1846, 2136 |
| AsuHPI | GGTGA | 4 cut(s) | 611, 793, 817, 2353 |
| AsuII | TTCGAA | 1 cut(s) | 909 |
| AsuNHI | GCTAGC | 1 cut(s) | 2861 |
| AvaI | CYCGRG | 1 cut(s) | 1796 |
| AvaII | GGWCC | 4 cut(s) | 256, 265, 442, 2895 |
| BaeGI | GKGCMC | 2 cut(s) | 378, 571 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 2052, 2085 |
| BalI | TGGCCA | 2 cut(s) | 438, 1576 |
| BanI | GGYRCC | 2 cut(s) | 212, 891 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 159, 191 |
| BauI | CACGAG | 1 cut(s) | 1385 |
| BbsI | GAAGAC | 4 cut(s) | 23, 1705, 2190, 2754 |
| Bbv12I | GWGCWC | 4 cut(s) | 378, 571, 2553, 2850 |
| BbvI | GCAGC | 1 cut(s) | 2797 |
| BccI | CCATC | 8 cut(s) | 453, 719, 1065, 1073, 1107, 1544, 1982, 2909 |
| BceAI | ACGGC | 1 cut(s) | 1225 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 90, 124 |
| BciT130I | CCWGG | 6 cut(s) | 440, 1376, 2033, 2096, 2169, 2400 |
| BciVI | GTATCC | 1 cut(s) | 1817 |
| BclI | TGATCA | 1 cut(s) | 2233 |
| BcnI | CCSGG | 3 cut(s) | 309, 1846, 2136 |
| BcoDI | GTCTC | 5 cut(s) | 1533, 1846, 1905, 2091, 2834 |
| BfmI | CTRYAG | 1 cut(s) | 1877 |
| BfoI | RGCGCY | 1 cut(s) | 216 |
| BfrI | CTTAAG | 1 cut(s) | 1597 |
| BfuI | GTATCC | 1 cut(s) | 1817 |
| BglII | AGATCT | 3 cut(s) | 1853, 2626, 2705 |
| BisI | GCNGC | 1 cut(s) | 2811 |
| BlsI | GCNGC | 1 cut(s) | 2812 |
| BmcAI | AGTACT | 2 cut(s) | 282, 2889 |
| Bme1390I | CCNGG | 9 cut(s) | 309, 440, 1376, 1846, 2033, 2096, 2136, 2169, 2400 |
| Bme18I | GGWCC | 4 cut(s) | 256, 265, 442, 2895 |
| BmeT110I | CYCGRG | 1 cut(s) | 1796 |
| BmgT120I | GGNCC | 4 cut(s) | 256, 265, 442, 2895 |
| BmiI | GGNNCC | 2 cut(s) | 214, 893 |
| BmrFI | CCNGG | 9 cut(s) | 309, 440, 1376, 1846, 2033, 2096, 2136, 2169, 2400 |
| BmrI | ACTGGG | 1 cut(s) | 1496 |
| BmsI | GCATC | 6 cut(s) | 265, 764, 1026, 1413, 1648, 2037 |
| BmtI | GCTAGC | 1 cut(s) | 2865 |
| BmuI | ACTGGG | 1 cut(s) | 1496 |
| BpiI | GAAGAC | 4 cut(s) | 23, 1705, 2190, 2754 |
| BpmI | CTGGAG | 1 cut(s) | 593 |
| Bpu14I | TTCGAA | 1 cut(s) | 909 |
| BpuEI | CTTGAG | 3 cut(s) | 208, 1468, 2504 |
| BpuMI | CCSGG | 3 cut(s) | 309, 1846, 2136 |
| Bsa29I | ATCGAT | 1 cut(s) | 106 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1716 |
| BsaHI | GRCGYC | 1 cut(s) | 213 |
| BsaI | GGTCTC | 3 cut(s) | 1905, 2091, 2834 |
| BsaJI | CCNNGG | 7 cut(s) | 1667, 2031, 2095, 2135, 2153, 2507, 2665 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 2463, 2493 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 1668, 1896, 2057, 2096, 2405 |
| Bse118I | RCCGGY | 1 cut(s) | 2172 |
| Bse1I | ACTGG | 2 cut(s) | 576, 1502 |
| Bse3DI | GCAATG | 2 cut(s) | 24, 672 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1716 |
| BseBI | CCWGG | 6 cut(s) | 440, 1376, 2033, 2096, 2169, 2400 |
| BseCI | ATCGAT | 1 cut(s) | 106 |
| BseDI | CCNNGG | 7 cut(s) | 1667, 2031, 2095, 2135, 2153, 2507, 2665 |
| BseGI | GGATG | 8 cut(s) | 445, 734, 1041, 1088, 1428, 2052, 2334, 2782 |
| BseJI | GATNNNNATC | 1 cut(s) | 1716 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 1668, 1896, 2057, 2096, 2405 |
| BseMI | GCAATG | 2 cut(s) | 24, 672 |
| BseMII | CTCAG | 2 cut(s) | 861, 1648 |
| BseNI | ACTGG | 2 cut(s) | 576, 1502 |
| BseRI | GAGGAG | 2 cut(s) | 1771, 2840 |
| BseSI | GKGCMC | 2 cut(s) | 378, 571 |
| BseXI | GCAGC | 1 cut(s) | 2797 |
| BsgI | GTGCAG | 1 cut(s) | 1870 |
| Bsh1285I | CGRYCG | 1 cut(s) | 110 |
| BshFI | GGCC | 3 cut(s) | 438, 1576, 2172 |
| BshNI | GGYRCC | 2 cut(s) | 212, 891 |
| BshVI | ATCGAT | 1 cut(s) | 106 |
| BsiEI | CGRYCG | 1 cut(s) | 110 |
| BsiHKAI | GWGCWC | 4 cut(s) | 378, 571, 2553, 2850 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1796 |
| BsiSI | CCGG | 4 cut(s) | 309, 1846, 2135, 2173 |
| BslFI | GGGAC | 5 cut(s) | 710, 935, 1221, 2112, 2363 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 1668, 1896, 2057, 2096, 2405 |
| BsmAI | GTCTC | 5 cut(s) | 1533, 1846, 1905, 2091, 2834 |
| BsmBI | CGTCTC | 1 cut(s) | 1846 |
| BsmFI | GGGAC | 5 cut(s) | 710, 935, 1221, 2112, 2363 |
| BsmI | GAATGC | 2 cut(s) | 469, 753 |
| BsnI | GGCC | 3 cut(s) | 438, 1576, 2172 |
| Bso31I | GGTCTC | 3 cut(s) | 1905, 2091, 2834 |
| BsoBI | CYCGRG | 1 cut(s) | 1796 |
| Bsp119I | TTCGAA | 1 cut(s) | 909 |
| Bsp1286I | GDGCHC | 4 cut(s) | 378, 571, 2553, 2850 |
| Bsp1407I | TGTACA | 2 cut(s) | 39, 1069 |
| BspACI | CCGC | 2 cut(s) | 498, 1238 |
| BspANI | GGCC | 3 cut(s) | 438, 1576, 2172 |
| BspCNI | CTCAG | 2 cut(s) | 862, 1647 |
| BspDI | ATCGAT | 1 cut(s) | 106 |
| BspHI | TCATGA | 3 cut(s) | 1270, 1357, 2496 |
| BspLI | GGNNCC | 2 cut(s) | 214, 893 |
| BspOI | GCTAGC | 1 cut(s) | 2865 |
| BspPI | GGATC | 5 cut(s) | 1243, 1890, 2173, 2378, 2591 |
| BspQI | GCTCTTC | 2 cut(s) | 519, 858 |
| BspT104I | TTCGAA | 1 cut(s) | 909 |
| BspT107I | GGYRCC | 2 cut(s) | 212, 891 |
| BspTI | CTTAAG | 1 cut(s) | 1597 |
| BspTNI | GGTCTC | 3 cut(s) | 1905, 2091, 2834 |
| BsrDI | GCAATG | 2 cut(s) | 24, 672 |
| BsrFI | RCCGGY | 1 cut(s) | 2172 |
| BsrGI | TGTACA | 2 cut(s) | 39, 1069 |
| BsrI | ACTGG | 2 cut(s) | 576, 1502 |
| BssAI | RCCGGY | 1 cut(s) | 2172 |
| BssECI | CCNNGG | 7 cut(s) | 1667, 2031, 2095, 2135, 2153, 2507, 2665 |
| BssNI | GRCGYC | 1 cut(s) | 213 |
| BssSI | CACGAG | 1 cut(s) | 1385 |
| BssT1I | CCWWGG | 3 cut(s) | 1667, 2507, 2665 |
| Bst2BI | CACGAG | 1 cut(s) | 1385 |
| Bst2UI | CCWGG | 6 cut(s) | 440, 1376, 2033, 2096, 2169, 2400 |
| Bst4CI | ACNGT | 8 cut(s) | 182, 635, 986, 1199, 2103, 2218, 2393, 2828 |
| Bst6I | CTCTTC | 4 cut(s) | 519, 858, 1343, 1975 |
| BstACI | GRCGYC | 1 cut(s) | 213 |
| BstAFI | CTTAAG | 1 cut(s) | 1597 |
| BstAUI | TGTACA | 2 cut(s) | 39, 1069 |
| BstBI | TTCGAA | 1 cut(s) | 909 |
| BstC8I | GCNNGC | 8 cut(s) | 425, 429, 679, 1445, 2699, 2815, 2863, 2880 |
| BstDEI | CTNAG | 7 cut(s) | 118, 617, 870, 1012, 1061, 1418, 1634 |
| BstF5I | GGATG | 8 cut(s) | 445, 734, 1041, 1088, 1428, 2052, 2334, 2782 |
| BstH2I | RGCGCY | 1 cut(s) | 216 |
| BstHHI | GCGC | 1 cut(s) | 215 |
| BstMAI | GTCTC | 5 cut(s) | 1533, 1846, 1905, 2091, 2834 |
| BstMCI | CGRYCG | 1 cut(s) | 110 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 219 |
| BstNI | CCWGG | 6 cut(s) | 440, 1376, 2033, 2096, 2169, 2400 |
| BstNSI | RCATGY | 5 cut(s) | 38, 431, 1441, 1447, 2701 |
| BstSCI | CCNGG | 9 cut(s) | 307, 438, 1374, 1844, 2031, 2094, 2134, 2167, 2398 |
| BstSFI | CTRYAG | 1 cut(s) | 1877 |
| BstSLI | GKGCMC | 2 cut(s) | 378, 571 |
| BstV1I | GCAGC | 1 cut(s) | 2797 |
| BstV2I | GAAGAC | 4 cut(s) | 23, 1705, 2190, 2754 |
| BstX2I | RGATCY | 6 cut(s) | 1248, 1853, 2370, 2596, 2626, 2705 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 1919, 2189 |
| BstYI | RGATCY | 6 cut(s) | 1248, 1853, 2370, 2596, 2626, 2705 |
| Bsu15I | ATCGAT | 1 cut(s) | 106 |
| BsuI | GTATCC | 1 cut(s) | 1817 |
| BsuRI | GGCC | 3 cut(s) | 438, 1576, 2172 |
| BsuTUI | ATCGAT | 1 cut(s) | 106 |
| BtsCI | GGATG | 8 cut(s) | 445, 734, 1041, 1088, 1428, 2052, 2334, 2782 |
| BtsIMutI | CAGTG | 5 cut(s) | 187, 569, 1278, 1509, 2626 |
| Cac8I | GCNNGC | 8 cut(s) | 425, 429, 679, 1445, 2699, 2815, 2863, 2880 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2101 |
| CciI | TCATGA | 3 cut(s) | 1270, 1357, 2496 |
| CfoI | GCGC | 1 cut(s) | 215 |
| Cfr10I | RCCGGY | 1 cut(s) | 2172 |
| Cfr13I | GGNCC | 4 cut(s) | 256, 265, 442, 2895 |
| ClaI | ATCGAT | 1 cut(s) | 106 |
| CseI | GACGC | 1 cut(s) | 1918 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 659, 694 |
| DdeI | CTNAG | 7 cut(s) | 118, 617, 870, 1012, 1061, 1418, 1634 |
| DinI | GGCGCC | 1 cut(s) | 214 |
| EaeI | YGGCCR | 2 cut(s) | 436, 1574 |
| Eam1104I | CTCTTC | 4 cut(s) | 519, 858, 1343, 1975 |
| EarI | CTCTTC | 4 cut(s) | 519, 858, 1343, 1975 |
| EciI | GGCGGA | 2 cut(s) | 513, 1227 |
| Eco130I | CCWWGG | 3 cut(s) | 1667, 2507, 2665 |
| Eco31I | GGTCTC | 3 cut(s) | 1905, 2091, 2834 |
| Eco32I | GATATC | 1 cut(s) | 2504 |
| Eco47I | GGWCC | 4 cut(s) | 256, 265, 442, 2895 |
| Eco57I | CTGAAG | 2 cut(s) | 1243, 2384 |
| Eco88I | CYCGRG | 1 cut(s) | 1796 |
| EcoRI | GAATTC | 2 cut(s) | 1554, 1907 |
| EcoRII | CCWGG | 6 cut(s) | 438, 1374, 2031, 2094, 2167, 2398 |
| EcoRV | GATATC | 1 cut(s) | 2504 |
| EcoT14I | CCWWGG | 3 cut(s) | 1667, 2507, 2665 |
| EcoT22I | ATGCAT | 4 cut(s) | 433, 779, 816, 1027 |
| EgeI | GGCGCC | 1 cut(s) | 214 |
| EheI | GGCGCC | 1 cut(s) | 214 |
| ErhI | CCWWGG | 3 cut(s) | 1667, 2507, 2665 |
| Esp3I | CGTCTC | 1 cut(s) | 1846 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 222, 254 |
| FaqI | GGGAC | 5 cut(s) | 710, 935, 1221, 2112, 2363 |
| FauNDI | CATATG | 1 cut(s) | 261 |
| FbaI | TGATCA | 1 cut(s) | 2233 |
| FblI | GTMKAC | 4 cut(s) | 1732, 1932, 2307, 2388 |
| Fnu4HI | GCNGC | 1 cut(s) | 2811 |
| FokI | GGATG | 8 cut(s) | 432, 741, 1048, 1095, 1435, 2059, 2341, 2789 |
| Fsp4HI | GCNGC | 1 cut(s) | 2811 |
| GlaI | GCGC | 1 cut(s) | 214 |
| GluI | GCNGC | 1 cut(s) | 2811 |
| GsuI | CTGGAG | 1 cut(s) | 593 |
| HaeII | RGCGCY | 1 cut(s) | 216 |
| HaeIII | GGCC | 3 cut(s) | 438, 1576, 2172 |
| HapII | CCGG | 4 cut(s) | 309, 1846, 2135, 2173 |
| HgaI | GACGC | 1 cut(s) | 1918 |
| HhaI | GCGC | 1 cut(s) | 215 |
| Hin1I | GRCGYC | 1 cut(s) | 213 |
| Hin6I | GCGC | 1 cut(s) | 213 |
| HinP1I | GCGC | 1 cut(s) | 213 |
| HincII | GTYRAC | 1 cut(s) | 1933 |
| HindII | GTYRAC | 1 cut(s) | 1933 |
| HindIII | AAGCTT | 1 cut(s) | 1342 |
| HpaII | CCGG | 4 cut(s) | 309, 1846, 2135, 2173 |
| HphI | GGTGA | 4 cut(s) | 611, 793, 817, 2353 |
| Hpy99I | CGWCG | 1 cut(s) | 1934 |
| HpyAV | CCTTC | 5 cut(s) | 59, 203, 687, 2759, 2836 |
| HpyCH4III | ACNGT | 8 cut(s) | 182, 635, 986, 1199, 2103, 2218, 2393, 2828 |
| HpyCH4IV | ACGT | 3 cut(s) | 877, 1173, 1839 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 219 |
| HpyF3I | CTNAG | 7 cut(s) | 118, 617, 870, 1012, 1061, 1418, 1634 |
| HpySE526I | ACGT | 3 cut(s) | 877, 1173, 1839 |
| Hsp92I | GRCGYC | 1 cut(s) | 213 |
| HspAI | GCGC | 1 cut(s) | 213 |
| KasI | GGCGCC | 1 cut(s) | 212 |
| Ksp22I | TGATCA | 1 cut(s) | 2233 |
| LguI | GCTCTTC | 2 cut(s) | 519, 858 |
| LmnI | GCTCC | 4 cut(s) | 57, 466, 2641, 2853 |
| Lsp1109I | GCAGC | 1 cut(s) | 2797 |
| LweI | GCATC | 6 cut(s) | 265, 764, 1026, 1413, 1648, 2037 |
| MaeII | ACGT | 3 cut(s) | 877, 1173, 1839 |
| MaeIII | GTNAC | 4 cut(s) | 364, 781, 827, 1800 |
| MfeI | CAATTG | 2 cut(s) | 786, 2793 |
| MflI | RGATCY | 6 cut(s) | 1248, 1853, 2370, 2596, 2626, 2705 |
| MhlI | GDGCHC | 4 cut(s) | 378, 571, 2553, 2850 |
| MlsI | TGGCCA | 2 cut(s) | 438, 1576 |
| MluNI | TGGCCA | 2 cut(s) | 438, 1576 |
| Mly113I | GGCGCC | 1 cut(s) | 213 |
| MlyI | GAGTC | 4 cut(s) | 1377, 1535, 1808, 2729 |
| Mox20I | TGGCCA | 2 cut(s) | 438, 1576 |
| Mph1103I | ATGCAT | 4 cut(s) | 433, 779, 816, 1027 |
| MroXI | GAANNNNTTC | 4 cut(s) | 662, 846, 1323, 2148 |
| MscI | TGGCCA | 2 cut(s) | 438, 1576 |
| MslI | CAYNNNNRTG | 5 cut(s) | 1269, 1442, 2045, 2187, 2464 |
| Msp20I | TGGCCA | 2 cut(s) | 438, 1576 |
| MspA1I | CMGCKG | 1 cut(s) | 423 |
| MspCI | CTTAAG | 1 cut(s) | 1597 |
| MspI | CCGG | 4 cut(s) | 309, 1846, 2135, 2173 |
| MspR9I | CCNGG | 9 cut(s) | 309, 440, 1376, 1846, 2033, 2096, 2136, 2169, 2400 |
| MunI | CAATTG | 2 cut(s) | 786, 2793 |
| Mva1269I | GAATGC | 2 cut(s) | 469, 753 |
| MvaI | CCWGG | 6 cut(s) | 440, 1376, 2033, 2096, 2169, 2400 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 219 |
| NarI | GGCGCC | 1 cut(s) | 213 |
| NciI | CCSGG | 3 cut(s) | 309, 1846, 2136 |
| NdeI | CATATG | 1 cut(s) | 261 |
| NheI | GCTAGC | 1 cut(s) | 2861 |
| NlaIV | GGNNCC | 2 cut(s) | 214, 893 |
| NmuCI | GTSAC | 3 cut(s) | 781, 827, 1800 |
| NsiI | ATGCAT | 4 cut(s) | 433, 779, 816, 1027 |
| NspI | RCATGY | 5 cut(s) | 38, 431, 1441, 1447, 2701 |
| NspV | TTCGAA | 1 cut(s) | 909 |
| OliI | CACNNNNGTG | 1 cut(s) | 2187 |
| PaeI | GCATGC | 3 cut(s) | 431, 1447, 2701 |
| PaeR7I | CTCGAG | 1 cut(s) | 1796 |
| PagI | TCATGA | 3 cut(s) | 1270, 1357, 2496 |
| PciI | ACATGT | 2 cut(s) | 34, 1437 |
| PciSI | GCTCTTC | 2 cut(s) | 519, 858 |
| PctI | GAATGC | 2 cut(s) | 469, 753 |
| PdmI | GAANNNNTTC | 4 cut(s) | 662, 846, 1323, 2148 |
| PfeI | GAWTC | 9 cut(s) | 404, 823, 857, 902, 1324, 1361, 1414, 1717, 2027 |
| PfoI | TCCNGGA | 2 cut(s) | 307, 2398 |
| PkrI | GCNGC | 1 cut(s) | 2812 |
| Ple19I | CGATCG | 1 cut(s) | 110 |
| PleI | GAGTC | 4 cut(s) | 1377, 1534, 1807, 2729 |
| PluTI | GGCGCC | 1 cut(s) | 216 |
| PpsI | GAGTC | 4 cut(s) | 1377, 1534, 1807, 2729 |
| PscI | ACATGT | 2 cut(s) | 34, 1437 |
| PshBI | ATTAAT | 1 cut(s) | 2718 |
| PsiI | TTATAA | 1 cut(s) | 326 |
| Psp6I | CCWGG | 6 cut(s) | 438, 1374, 2031, 2094, 2167, 2398 |
| PspGI | CCWGG | 6 cut(s) | 438, 1374, 2031, 2094, 2167, 2398 |
| PspN4I | GGNNCC | 2 cut(s) | 214, 893 |
| PspPI | GGNCC | 4 cut(s) | 256, 265, 442, 2895 |
| PspXI | VCTCGAGB | 1 cut(s) | 1796 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1585, 1617 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2101 |
| PsuI | RGATCY | 6 cut(s) | 1248, 1853, 2370, 2596, 2626, 2705 |
| PvuI | CGATCG | 1 cut(s) | 110 |
| PvuII | CAGCTG | 1 cut(s) | 423 |
| RseI | CAYNNNNRTG | 5 cut(s) | 1269, 1442, 2045, 2187, 2464 |
| SalI | GTCGAC | 1 cut(s) | 1931 |
| SapI | GCTCTTC | 2 cut(s) | 519, 858 |
| SatI | GCNGC | 1 cut(s) | 2811 |
| Sau96I | GGNCC | 4 cut(s) | 256, 265, 442, 2895 |
| ScaI | AGTACT | 2 cut(s) | 282, 2889 |
| SchI | GAGTC | 4 cut(s) | 1377, 1535, 1808, 2729 |
| ScrFI | CCNGG | 9 cut(s) | 309, 440, 1376, 1846, 2033, 2096, 2136, 2169, 2400 |
| SduI | GDGCHC | 4 cut(s) | 378, 571, 2553, 2850 |
| SfaNI | GCATC | 6 cut(s) | 265, 764, 1026, 1413, 1648, 2037 |
| SfcI | CTRYAG | 1 cut(s) | 1877 |
| SfoI | GGCGCC | 1 cut(s) | 214 |
| Sfr274I | CTCGAG | 1 cut(s) | 1796 |
| SfuI | TTCGAA | 1 cut(s) | 909 |
| SinI | GGWCC | 4 cut(s) | 256, 265, 442, 2895 |
| SlaI | CTCGAG | 1 cut(s) | 1796 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 1269, 1442, 2045, 2187, 2464 |
| SmlI | CTYRAG | 5 cut(s) | 223, 1483, 1597, 1796, 2519 |
| SmoI | CTYRAG | 5 cut(s) | 223, 1483, 1597, 1796, 2519 |
| SphI | GCATGC | 3 cut(s) | 431, 1447, 2701 |
| SsiI | CCGC | 2 cut(s) | 498, 1238 |
| SspDI | GGCGCC | 1 cut(s) | 212 |
| SspI | AATATT | 2 cut(s) | 88, 151 |
| StyD4I | CCNGG | 9 cut(s) | 307, 438, 1374, 1844, 2031, 2094, 2134, 2167, 2398 |
| StyI | CCWWGG | 3 cut(s) | 1667, 2507, 2665 |
| TaaI | ACNGT | 8 cut(s) | 182, 635, 986, 1199, 2103, 2218, 2393, 2828 |
| TaiI | ACGT | 3 cut(s) | 880, 1176, 1842 |
| TatI | WGTACW | 5 cut(s) | 39, 280, 1069, 1389, 2887 |
| TfiI | GAWTC | 9 cut(s) | 404, 823, 857, 902, 1324, 1361, 1414, 1717, 2027 |
| TscAI | CASTG | 5 cut(s) | 187, 576, 1285, 1509, 2626 |
| TseFI | GTSAC | 3 cut(s) | 781, 827, 1800 |
| TseI | GCWGC | 1 cut(s) | 2810 |
| Tsp45I | GTSAC | 3 cut(s) | 781, 827, 1800 |
| TspGWI | ACGGA | 1 cut(s) | 1236 |
| TspRI | CASTG | 5 cut(s) | 187, 576, 1285, 1509, 2626 |
| Vha464I | CTTAAG | 1 cut(s) | 1597 |
| VneI | GTGCAC | 2 cut(s) | 374, 567 |
| VpaK11BI | GGWCC | 4 cut(s) | 256, 265, 442, 2895 |
| VspI | ATTAAT | 1 cut(s) | 2718 |
| XapI | RAATTY | 4 cut(s) | 1094, 1554, 1907, 2144 |
| XbaI | TCTAGA | 2 cut(s) | 1312, 1489 |
| XceI | RCATGY | 5 cut(s) | 38, 431, 1441, 1447, 2701 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1372 |
| XhoI | CTCGAG | 1 cut(s) | 1796 |
| XmiI | GTMKAC | 4 cut(s) | 1732, 1932, 2307, 2388 |
| XmnI | GAANNNNTTC | 4 cut(s) | 662, 846, 1323, 2148 |
| ZrmI | AGTACT | 2 cut(s) | 282, 2889 |
| Zsp2I | ATGCAT | 4 cut(s) | 433, 779, 816, 1027 |