Rw1G016940

TMV resistance protein N-like

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr1
Physical Location & Seq
Forward (+)
37619557 .. 37634066
14510 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw1G016940.1

Sequence Viewer

Length: 4155 bp
ATGTACCGTGCAAACACTCCTTCAGTAAACGCAAATGAGACAATCTTGGAAACCAATGCATTTGCAAGGATGTGTAAACTGAGACTACTCCATCTTAGTAATGTACAACTCAATGGATGTTATAAAGAACTTCCCACAAAATTGAGATGGTTGTGTTGGCATGCATTTCCTCTGGATTGTATACCCACTGATTTTCCTATGGCGAACCTGGTTGTTCTTAAAATGCATAATAGCAGCTTGACACAAATCTGGAAAGGGACCAAATATCTTCCATCATTGAAGGTCCTTGATCTCAGCTATTCTCATGGCCTTACCGAAACTGCCAGTTTCTCTCCTTGTCCCAATCTAGAGAAACTGGTTCTTGTAGATTGTGCAAGCCTGATTAATGTTCATGAATCAATTGGAGGCCTTGAGAGACTTGTTTACTTGAATATGAAAAATTGCAAAAATATTAGGATGCTTCCGAAGAATATTTGTATGCTGAAGTTACTTGAAACACTTATTATATCTGGTTGCTCAAATCTGAATATGTTTCCAATGGAGATGAAGAACATGGAATCTCTTAAAGTGCTGGAAACAAATGAAATTCCAACAAATCAATTACGCTCTACTGGTGGTGACATCAACTCATCGCTAGGAAGAAGTATTTGTATTTTTTGGACTTGCTTACCTCACTCTTTGGTAGAATTAAGTTTAAGTGGGTGCAATCTCTTGGATGATGCTTTTCCTGGGAATTTTGGTAACCTATCCTCATTGAAGAGATTAGACTTACAAAATAACCCAATTTGTAGCCTACCAAATTGTGTCAGAGATATGAATAGGCTTGATAAACTCTCCTATTGCTTTTGTAAAAGGCTGAAATCACTTTTAGGACTACCAAAATTAGAACCCATTGGAAGTGTTGATGTAGAAATGATCAATGTTTTGGGGTTGTGCAACTTGGAACCTGTGAGAACTGTTCAGCTGATGCAACCACAAGCCTCAGATCATTATCTGTGTCCGATCCAGGGACTGCATGAAGGTGGCATATTCAGCACATTCCTGTCTGGAAATGAGGTTCCAGGCCTGTACGAGTCAAAGTTTATAAAAGGTGTCGTTAAAGAGATAGGAAACAAGCTTAGTCGTACACCATTGAGTGTTGGCTTCAACCTGATTGGAATCCATTCTGGAGCTAACAAAATTAATCTATGGATACAAGATGGATCAACTGATGTAGGTATCCTTGTAATTTTTGGGATGTCGGGAATAGGGAAGACAACAATCGCAAAATATGTCTATAATTTGAACTTCAGAGAATTTGAAGGAAGCAGTTTCATTGAAAATATTAGAGAAACTTCAGAACAAACCAATGGCCTAGTTCAACTACAAAAACAGCTCCTTTCTGATATTTTAAATGGAAGAGAAGTGAAAGTACATAATGCTAGCCAGGGAAAAATTAAGATTGAGGATGCCATAAGCTGTAAAAGAGTTCTTCTTGTTCTCGATGACGTGGATCATATCGACCAATTTGATGCATTACTGACAATGCGAGAGCGATTTTATCCGGGAAGTAAAATTGTCATAACAACTAGGCGAGCAAGGCTGTTAAAGGCACGGGGAGTTACTATGGTGCATTCTGTTCGAGCTTTGAAATACAATGAATCATTGAAGCTCTTCAGTTGGCATGCTTTTCGACGAGATCATCCAATTGAAGGTTACGAGAAACATACTGAAAAGTTTGTACGCCATGGCGCAGGGCTTCCATTAGCTCTTCAAGTTTTAGGTTCTTCTCTATTTGGGGAAAGTACAGTTTTATGGGAAAGTGCATTGAAGAAACTAGAAGCTATTCCCAATAGTGAAATCATGAATAAACTCAAAATGAGTTATGATGTACTCGATAAACATGATCAGGAAGTGTTCCTCCACATTGCTTGTTGCTTCATTGGAAATGACAAGGATTACACTGTTGCAATACTAGATGGATGTAATTTGTACACTACTGTTGCCATTATGAATCTCATTGATAGATGCCTAGTAACAATTGGCCCCACGAACAAGGTGGTGATGCATGACATGATTCGTGATATGGGAAGAGAAATTGTTCGCCTAGAAGCAGAGGAGCCTCGGAAACGTAGTAGATTATGGCATTACAAGGACTCCTTCGAAGTACTGAGAGAAAAGAATGGTACAAAAACAATTGAAAGTCTTGAATTAAACATGCAAAGGCATCTTGAAGTCACTAACTCAAGATATCCCAACGAGATTGTCTTGGAAACCAATGCATTTGCAAAGATGCACAAACTAAAACTACTCCGGTTAAGTCAAGTAAATCTCACTGGAAGCTTTGAAAAATTTCCGACTGGATTGAGATTGTTGTGTTGGATTGCATTTCCTTTGGATTCTATACCGATTGATTTTCATTTGGAGAACCTGGTTGTTCTTGAAATGCAGTACAGCAGCTTGAGACAAATATTGAGTGGAACAAAGTGTTTTCCATCCTTGAAGATGCTTGATCTCAGCCATTCCCATGCCCTTATTGCTACCCTTGACTTTTCTCTTTGTCCCAATTTAGAGAAACTCATGCTTATAGATTGTAAAGGCTTGATTGATGTCCATGAGTCCATTGGAATTCTAGACAGACTTGTTTACTTGAACATGAAAGATTGCAAAACTCTTAGCATGCTTCCAAAGAATATTGGTAAGCTAAAGCTACTTGACACACTTATTGTATCTGGTTGTTCAAATCTTAGCAACTCTTCAATAGAGATGATTAGGAGCATGGAGTCTCTGAAAGTGCTTGAACTAGATAGAATTCCAATAAGTCAATTATTCACTCTCTGTGGGAAGGTCAAGTCGGGGAGTTATTTACCAGGCTCTTTACTATCATTAAGTCTGAGTGGGTGTAATCTTTCTGATGATGCTTTTCCTGTGGATTTCACTAGCCTTTTCTCTCTGAGAAGTTTAAATCTAAGTGATAATCCAATAACTGGCCTACCCAATTGCGTCAAGGGTCTGACAAGTCTAGATGAACTCTCCTTTTACAACTGTTTGAGCCTCGAATCCCTTGTAGAGCTACCAAAAGTAGGTTTCAAGTTGAATGTATCCGGTTGCGAAGCATTGGTAAGAATAACATATCAGTCAAAATCCTGTGCTCAATTTCCACGCCTGAGTGGTAAGAACTACAGCCTAGTTGAGTGGGAATATGAATACAAGTTAGAACCCATTGGAAAAGTTGATGTAGAATTGCTCAAACTTTTGGGCTTGAGCAACTTGGACTTTGAATGCAGGCCAACCATTCGGTTGTGCGCAAAATATACTGGTTACGACATAATTCATCATGGTGGAATACAGGGACTGCATGAGTATGGTTGTACAAACTCTTACTTCCGAGGAAATGCAAGAAAGATAGACATGTTTAGTACATTTCTTCCCGGGAATGAGGTTCCAGGCCAATTCAGCCATAGAACTAAAGGCTCTTCCTCAATATCATTAACTGTGCCTTTGCCTTCAGCTCATGATCTCAGAATCCGAGGCTTTAACATCTTCATTGTCTATGCAATTTCAGACAATGACGATGAAAGATATTCTTCATGTACTGACCAGGGTTCAATAACTATCAAAGTCATAAATGAGAGCGACGACAGCAACTGGCATTATGAGCCAATATATCACGGTATTCCGGGTAAGGGAGAACACATGATATGGTTAACCCATTGGAATATGGAGAATCAAGTAAAAGGTAGGGATCAAGTGGCTGTTTCACTCTCGGTAAAACATGCAAGGTTTCGGTATCAGGTAAAGGAGTGGGGGATCCAGGTTGTACAGGAGAAGCAAGAAGGTAAGATGTGTACCGACCACTACACCACAAATCCCATTTGTTTTCCATGTGCCACTGGTGGAGATTTGTTAACATCTGATGAGCCGTTGAGGGGAACATACTTGCTGTCCTATGAACCTGATTCAACGGTAGATAAAGAAGAACAACGGGATGAAGATGACAAGCTTGCAACAGCGACCAATACTGACGGCAGTAACAACCGTGCGCGGGATCCCAGAAAGTGGAAGGTGCTCATCAGTGCTGCTGTCATGTTAATTCTCTGTTTATCTGTTCGCTGGTTCTTCTTTTTCTCCGCCAGAGACAGATACATGGAGTCCAATATTTTGGTTCCTACATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1384

Amino Acids

156.05

Weight (kDa)

7.31

Isoelectric Point (pI)

34.98

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 93 - 196 1.6e-06 Leucine-rich repeat region
LRR_8 PF13855 226 - 278 8.7e-06 Leucine rich repeat
NB-ARC PF00931 402 - 559 6.7e-19 NB-ARC domain
WHD_ROQ1 PF23282 627 - 695 2e-17 Disease resistance protein Roq1-like, winged-helix domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000036)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G57630 AT1G72930 AT5G38344
fragaria_vesca FvH4_1g27020 FvH4_2g00931 FvH4_2g17330 FvH4_2g17330 FvH4_2g17340 FvH4_2g17350 FvH4_2g20690 FvH4_5g15301 FvH4_5g34194 FvH4_5g38530 FvH4_5g38740 FvH4_5g38740 FvH4_5g38740 FvH4_6g03800 FvH4_7g09791 FvH4_7g09800 FvH4_7g09800 FvH4_7g10510 FvH4_7g10520 FvH4_7g10520 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750
malus_domestica MD02G1217100.v1.1 MD02G1217200.v1.1 MD02G1217400.v1.1 MD02G1217600.v1.1 MD02G1264800.v1.1 MD02G1264900.v1.1 MD02G1302100.v1.1 MD04G1010700.v1.1 MD05G1006800.v1.1 MD05G1140100.v1.1 MD05G1140200.v1.1 MD05G1152200.v1.1 MD07G1073500.v1.1 MD07G1101700.v1.1 MD07G1102200.v1.1 MD07G1103200.v1.1 MD07G1112300.v1.1 MD08G1018200.v1.1 MD08G1018400.v1.1 MD08G1018800.v1.1 MD08G1019000.v1.1 MD08G1019100.v1.1 MD08G1019200.v1.1 MD08G1019300.v1.1 MD08G1019400.v1.1 MD08G1019600.v1.1 MD08G1019900.v1.1 MD08G1020000.v1.1 MD08G1020200.v1.1 MD08G1020500.v1.1 MD08G1020700.v1.1 MD08G1020800.v1.1 MD08G1040700.v1.1 MD11G1112400.v1.1 MD12G1068600.v1.1 MD12G1193200.v1.1 MD13G1050600.v1.1 MD15G1374900.v1.1 MD15G1375100.v1.1 MD15G1416500.v1.1 MD17G1072500.v1.1 MD17G1274200.v1.1 MD17G1274900.v1.1
prunus_persica Prupe.2G121000_v2.0.a1 Prupe.2G121000_v2.0.a1 Prupe.2G125800_v2.0.a1 Prupe.2G126000_v2.0.a1 Prupe.2G126100_v2.0.a1 Prupe.2G126200_v2.0.a1 Prupe.2G126300_v2.0.a1 Prupe.2G126400_v2.0.a1 Prupe.2G126500_v2.0.a1 Prupe.2G126600_v2.0.a1 Prupe.2G126700_v2.0.a1 Prupe.2G126700_v2.0.a1 Prupe.2G126800_v2.0.a1 Prupe.2G126900_v2.0.a1 Prupe.2G127000_v2.0.a1 Prupe.2G127000_v2.0.a1 Prupe.2G127000_v2.0.a1 Prupe.2G127000_v2.0.a1 Prupe.2G135500_v2.0.a1 Prupe.2G135600_v2.0.a1 Prupe.2G135700_v2.0.a1 Prupe.2G135700_v2.0.a1 Prupe.3G009800_v2.0.a1 Prupe.3G010200_v2.0.a1 Prupe.3G131000_v2.0.a1 Prupe.4G260800_v2.0.a1 Prupe.4G260900_v2.0.a1 Prupe.6G083100_v2.0.a1 Prupe.6G083200_v2.0.a1 Prupe.6G083400_v2.0.a1 Prupe.6G132100_v2.0.a1 Prupe.8G184900_v2.0.a1 Prupe.8G185200_v2.0.a1 Prupe.8G185300_v2.0.a1
pyrus_communis pycom02g17870 pycom02g17880 pycom02g19520 pycom02g22610 pycom02g22630 pycom02g22680 pycom05g13540 pycom05g14680 pycom07g04880 pycom07g04890 pycom07g05690 pycom07g05710 pycom07g05720 pycom07g05750 pycom07g05780 pycom07g06300 pycom07g08320 pycom07g08330 pycom07g08350 pycom07g08360 pycom07g08370 pycom07g08410 pycom07g08420 pycom07g08430 pycom07g08440 pycom07g08470 pycom07g08480 pycom07g08520 pycom07g08550 pycom07g08560 pycom07g08640 pycom07g08660 pycom07g08670 pycom07g08680 pycom07g08690 pycom07g08720 pycom07g08730 pycom07g08790 pycom07g08800 pycom07g08810 pycom07g08860 pycom07g08890 pycom07g09720 pycom08g01590 pycom08g01600 pycom08g01620 pycom08g01630 pycom08g01640 pycom10g12630 pycom15g16490 pycom17g07200 pycom17g07210 pycom17g07220 pycom17g11730 pycom17g11740 pycom17g27340 pycom17g27380
rosa_chinensis RchiOBHm_Chr1g0342571 RchiOBHm_Chr1g0346231 RchiOBHm_Chr1g0346831 RchiOBHm_Chr1g0346891 RchiOBHm_Chr1g0348311 RchiOBHm_Chr1g0348321 RchiOBHm_Chr1g0348331 RchiOBHm_Chr1g0348361 RchiOBHm_Chr1g0348371 RchiOBHm_Chr1g0348381 RchiOBHm_Chr1g0348401 RchiOBHm_Chr1g0348411 RchiOBHm_Chr1g0348421 RchiOBHm_Chr1g0348431 RchiOBHm_Chr2g0130881 RchiOBHm_Chr3g0487331 RchiOBHm_Chr5g0060371 RchiOBHm_Chr6g0246491 RchiOBHm_Chr6g0246871 RchiOBHm_Chr6g0250311 RchiOBHm_Chr6g0250781 RchiOBHm_Chr6g0251431 RchiOBHm_Chr6g0281871 RchiOBHm_Chr6g0281881 RchiOBHm_Chr6g0281931 RchiOBHm_Chr6g0281941 RchiOBHm_Chr6g0281951 RchiOBHm_Chr6g0281971 RchiOBHm_Chr6g0281981 RchiOBHm_Chr7g0240541 RchiOBHm_Chr7g0240631 RchiOBHm_Chr7g0240671
rosa_laevigata RLG00000000627 RLG00000000631 RLG00000000641 RLG00000000645 RLG00000000652 RLG00000000662 RLG00000000663 RLG00000000667 RLG00000000670 RLG00000000702 RLG00000001216 RLG00000001219 RLG00000007678 RLG00000012923 RLG00000012996 RLG00000013243 RLG00000017513 RLG00000017514 RLG00000020936 RLG00000022755 RLG00000023013 RLG00000028646 RLG00000028654 RLG00000028662 RLG00000028665 RLG00000028667 RLG00000028711 RLG00000028714 RLG00000028716 RLG00000028770 RLG00000028771 RLG00000028773 RLG00000028778 RLG00000028798 RLG00000028809 RLG00000028813 RLG00000029334 RLG00000030003 RLG00000033910 RLG00000034358 RLG00000035430
rosa_multiflora Rmu_co8031134.1_g000001 Rmu_co8092796.1_g000001 Rmu_co8130156.1_g000001 Rmu_co8325323.1_g000001 Rmu_co8424083.1_g000002 Rmu_sc0000008.1_g000003 Rmu_sc0000008.1_g000011 Rmu_sc0000008.1_g000015 Rmu_sc0000008.1_g000020 Rmu_sc0000091.1_g000015 Rmu_sc0000091.1_g000018 Rmu_sc0000091.1_g000029 Rmu_sc0000091.1_g000031 Rmu_sc0000391.1_g000004 Rmu_sc0001070.1_g000030 Rmu_sc0001293.1_g000016 Rmu_sc0001674.1_g000006 Rmu_sc0001731.1_g000002 Rmu_sc0001731.1_g000003 Rmu_sc0001731.1_g000005 Rmu_sc0001911.1_g000029 Rmu_sc0001913.1_g000038 Rmu_sc0001955.1_g000025 Rmu_sc0001992.1_g000022 Rmu_sc0001992.1_g000028 Rmu_sc0001992.1_g000031 Rmu_sc0002517.1_g000013 Rmu_sc0002517.1_g000017 Rmu_sc0002551.1_g000022 Rmu_sc0002551.1_g000029 Rmu_sc0002551.1_g000038 Rmu_sc0002705.1_g000015 Rmu_sc0002705.1_g000016 Rmu_sc0002882.1_g000055 Rmu_sc0003232.1_g000027 Rmu_sc0003363.1_g000037 Rmu_sc0003600.1_g000054 Rmu_sc0003918.1_g000011 Rmu_sc0004395.1_g000011 Rmu_sc0005071.1_g000004 Rmu_sc0005255.1_g000018 Rmu_sc0005327.1_g000004 Rmu_sc0005597.1_g000007 Rmu_sc0007060.1_g000007 Rmu_sc0007310.1_g000003 Rmu_sc0007383.1_g000014 Rmu_sc0007799.1_g000003 Rmu_sc0008477.1_g000016 Rmu_sc0010151.1_g000009 Rmu_sc0011217.1_g000005 Rmu_sc0016269.1_g000006 Rmu_sc0021495.1_g000001 Rmu_sc0027364.1_g000001 Rmu_sc0029432.1_g000001 Rmu_sc0041386.1_g000001 Rmu_ssc0000126.1_g000023 Rmu_ssc0000126.1_g000027
rosa_roxburghii Rroxscaffold_1G00006130 Rroxscaffold_1G00023320 Rroxscaffold_1G00038770 Rroxscaffold_2G00119800 Rroxscaffold_2G00121860 Rroxscaffold_3G00219780 Rroxscaffold_3G00219890 Rroxscaffold_4G00306740 Rroxscaffold_4G00306820 Rroxscaffold_4G00307000 Rroxscaffold_4G00307010 Rroxscaffold_4G00307020 Rroxscaffold_4G00308030 Rroxscaffold_4G00308070 Rroxscaffold_4G00308450 Rroxscaffold_4G00308460 Rroxscaffold_4G00315320 Rroxscaffold_5G00352470 Rroxscaffold_5G00371420 Rroxscaffold_6G00392300 Rroxscaffold_6G00394870 Rroxscaffold_6G00394890 Rroxscaffold_7G00186700 Rroxscaffold_7G00194980 Rroxscaffold_7G00216840
rosa_rugosa Rorug01G0076100 Rorug01G0128100 Rorug01G0149000.1 Rorug01G0149500.1 Rorug01G0180000 Rorug01G0180100 Rorug01G0182900 Rorug01G0184000 Rorug01G0184100 Rorug01G0184300 Rorug01G0184600 Rorug01G0184700 Rorug01G0184700 Rorug01G0184900 Rorug01G0185000 Rorug01G0185100 Rorug01G0189300 Rorug01G0194100 Rorug01G0194100 Rorug01G0194200 Rorug01G0194400 Rorug01G0194400 Rorug01G0194500 Rorug02G0090400 Rorug02G0090400 Rorug03G0233000 Rorug03G0233100 Rorug05G0178600 Rorug05G0178700 Rorug05G0579200 Rorug06G0144100 Rorug06G0144300 Rorug06G0144300 Rorug06G0179300 Rorug06G0208800 Rorug07G0323500 Rorug07G0337000
rosa_samantha Rh1AG046100 Rh1AG201400 Rh1AG201800 Rh1AG202100 Rh1AG202600 Rh1AG211500 Rh1AG211800 Rh1AG212200 Rh1AG212500 Rh1AG212600 Rh1AG214200 Rh1BG168000 Rh1BG168300 Rh1BG168500 Rh1BG177900 Rh1BG178200 Rh1BG178300 Rh1BG178800 Rh1BG178900 Rh1CG080900 Rh1CG183300 Rh1CG186300 Rh1CG186700 Rh1CG187000 Rh1CG187300 Rh1CG193400 Rh1CG195800 Rh1CG196000 Rh1CG196100 Rh1CG196400 Rh1CG196500 Rh1CG196800 Rh1CG198800 Rh1CG442600 Rh1DG086200 Rh1DG155400 Rh1DG156200 Rh1DG194000 Rh1DG194300 Rh1DG194900 Rh1DG197000 Rh1DG198800 Rh1DG199000 Rh1DG199200 Rh1DG202000 Rh1DG203900 Rh1DG207600 Rh1DG207900 Rh1DG208000 Rh1DG208500 Rh1DG208600 Rh1DG208700 Rh3CG339100 Rh5AG106500 Rh5AG264800 Rh5AG265300 Rh5CG302800 Rh5DG277900 Rh6AG257600 Rh6AG257700 Rh6BG260500 Rh6BG260700 Rh6CG259600 Rh6CG259700 Rh6DG252100 Rh7DG126900
rosa_wichuraiana Rw0G005780 Rw0G007540 Rw0G007550 Rw0G007560 Rw0G009390 Rw1G016900 Rw1G016930 Rw1G016940 Rw1G016970 Rw1G017860 Rw1G017890 Rw1G017900 Rw1G017910 Rw1G017920 Rw1G017960 Rw1G017970 Rw1G017980 Rw1G018150 Rw4G000830 Rw5G009290 Rw5G018950 Rw5G024850 Rw5G024870 Rw5G040460 Rw6G022290 Rw7G041020 Rw7G041200 Rw7G041360 Rw7G041450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 123, 1085
Acc16I TGCGCA 1 cut(s) 3286
AccB7I CCANNNNNTGG 2 cut(s) 2966, 4038
AccI GTMKAC 1 cut(s) 181
AccII CGCG 1 cut(s) 4024
AciI CCGC 2 cut(s) 4024, 4110
AclWI GGATC 8 cut(s) 997, 1210, 1500, 3732, 3784, 3797, 4022, 4035
AcsI RAATTY 6 cut(s) 585, 733, 1295, 2330, 2607, 2790
AcuI CTGAAG 6 cut(s) 6, 503, 1273, 1320, 1639, 3471
AfiI CCNNNNNNNGG 8 cut(s) 1007, 1691, 2966, 3062, 3665, 3908, 4024, 4038
AflIII ACRYGT 1 cut(s) 3390
AjiI CACGTC 1 cut(s) 1489
AloI GAACNNNNNNTCC 2 cut(s) 1041, 1073
Alw21I GWGCWC 2 cut(s) 3133, 4050
Alw26I GTCTC 6 cut(s) 32, 76, 409, 2437, 2769, 4110
AlwI GGATC 8 cut(s) 997, 1210, 1500, 3732, 3784, 3797, 4022, 4035
AlwNI CAGNNNCTG 3 cut(s) 1012, 3334, 3627
Ama87I CYCGRG 1 cut(s) 3410
AoxI GGCC 8 cut(s) 307, 406, 1063, 1351, 2023, 2968, 3266, 3427
ApeKI GCWGC 3 cut(s) 234, 2436, 4058
ApoI RAATTY 6 cut(s) 585, 733, 1295, 2330, 2607, 2790
AseI ATTAAT 2 cut(s) 384, 1182
Asp700I GAANNNNTTC 5 cut(s) 1162, 1652, 1824, 2079, 2331
AspLEI GCGC 3 cut(s) 1733, 3287, 4024
AspS9I GGNCC 3 cut(s) 258, 283, 2024
AsuC2I CCSGG 4 cut(s) 1545, 3411, 3412, 3660
AsuHPI GGTGA 2 cut(s) 629, 2053
AsuII TTCGAA 1 cut(s) 2142
AsuNHI GCTAGC 1 cut(s) 1421
AvaI CYCGRG 1 cut(s) 3410
AvaII GGWCC 2 cut(s) 258, 283
BamHI GGATCC 2 cut(s) 3789, 4027
BarI GAAGNNNNNNTAC 2 cut(s) 1395, 1427
BbsI GAAGAC 1 cut(s) 1259
Bbv12I GWGCWC 2 cut(s) 3133, 4050
BbvI GCAGC 3 cut(s) 246, 2448, 4045
BccI CCATC 6 cut(s) 99, 141, 280, 1193, 1952, 2482
BceAI ACGGC 2 cut(s) 3886, 4021
BcgI CGANNNNNNTGC 4 cut(s) 1601, 1635, 1652, 1686
BciVI GTATCC 3 cut(s) 1185, 1229, 3091
BclI TGATCA 2 cut(s) 915, 1885
BcnI CCSGG 4 cut(s) 1545, 3411, 3412, 3660
BcoDI GTCTC 6 cut(s) 32, 76, 409, 2437, 2769, 4110
BfmI CTRYAG 1 cut(s) 3160
BfuI GTATCC 3 cut(s) 1185, 1229, 3091
BisI GCNGC 3 cut(s) 235, 2437, 4059
BlsI GCNGC 3 cut(s) 236, 2438, 4060
BmcAI AGTACT 1 cut(s) 2148
Bme18I GGWCC 2 cut(s) 258, 283
BmeT110I CYCGRG 1 cut(s) 3410
BmgBI CACGTC 1 cut(s) 1489
BmgT120I GGNCC 3 cut(s) 258, 283, 2024
BmiI GGNNCC 9 cut(s) 259, 945, 1059, 2026, 2100, 3423, 3791, 4029, 4146
BmtI GCTAGC 1 cut(s) 1425
BpiI GAAGAC 1 cut(s) 1259
BpmI CTGGAG 1 cut(s) 1188
Bpu14I TTCGAA 1 cut(s) 2142
BpuEI CTTGAG 4 cut(s) 431, 2209, 2461, 3262
BpuMI CCSGG 4 cut(s) 1545, 3411, 3412, 3660
BsaBI GATNNNNATC 2 cut(s) 990, 1157
BsaJI CCNNGG 9 cut(s) 728, 1006, 1426, 1726, 2102, 3367, 3410, 3508, 3580
BsaWI WCCGGW 2 cut(s) 2292, 3083
BsaXI ACNNNNNCTCC 2 cut(s) 2120, 2150
Bsc4I CCNNNNNNNGG 8 cut(s) 1007, 1691, 2966, 3062, 3665, 3908, 4024, 4038
Bse1I ACTGG 9 cut(s) 324, 360, 616, 2320, 2344, 2971, 3301, 3632, 3877
Bse3DI GCAATG 1 cut(s) 1905
Bse8I GATNNNNATC 2 cut(s) 990, 1157
BseDI CCNNGG 9 cut(s) 728, 1006, 1426, 1726, 2102, 3367, 3410, 3508, 3580
BseJI GATNNNNATC 2 cut(s) 990, 1157
BseLI CCNNNNNNNGG 8 cut(s) 1007, 1691, 2966, 3062, 3665, 3908, 4024, 4038
BseMI GCAATG 1 cut(s) 1905
BseMII CTCAG 9 cut(s) 71, 307, 996, 2141, 2509, 2864, 2924, 3137, 3514
BseNI ACTGG 9 cut(s) 324, 360, 616, 2320, 2344, 2971, 3301, 3632, 3877
BseRI GAGGAG 1 cut(s) 2111
BseXI GCAGC 3 cut(s) 246, 2448, 4045
Bsh1236I CGCG 1 cut(s) 4024
BshFI GGCC 8 cut(s) 309, 408, 1065, 1353, 2025, 2970, 3268, 3429
BsiHKAI GWGCWC 2 cut(s) 3133, 4050
BsiHKCI CYCGRG 1 cut(s) 3410
BsiSI CCGG 5 cut(s) 1544, 2293, 3084, 3411, 3659
BslFI GGGAC 5 cut(s) 271, 324, 1023, 2526, 3345
BslI CCNNNNNNNGG 8 cut(s) 1007, 1691, 2966, 3062, 3665, 3908, 4024, 4038
BsmAI GTCTC 6 cut(s) 32, 76, 409, 2437, 2769, 4110
BsmFI GGGAC 5 cut(s) 271, 324, 1023, 2526, 3345
BsmI GAATGC 2 cut(s) 1612, 3266
BsnI GGCC 8 cut(s) 309, 408, 1065, 1353, 2025, 2970, 3268, 3429
BsoBI CYCGRG 1 cut(s) 3410
Bsp119I TTCGAA 1 cut(s) 2142
Bsp1286I GDGCHC 2 cut(s) 3133, 4050
Bsp1407I TGTACA 4 cut(s) 103, 1971, 3350, 3799
Bsp19I CCATGG 1 cut(s) 1726
BspACI CCGC 2 cut(s) 4024, 4110
BspANI GGCC 8 cut(s) 309, 408, 1065, 1353, 2025, 2970, 3268, 3429
BspCNI CTCAG 9 cut(s) 72, 306, 995, 2142, 2508, 2865, 2925, 3138, 3513
BspFNI CGCG 1 cut(s) 4024
BspHI TCATGA 3 cut(s) 391, 1842, 3493
BspLI GGNNCC 9 cut(s) 259, 945, 1059, 2026, 2100, 3423, 3791, 4029, 4146
BspOI GCTAGC 1 cut(s) 1425
BspPI GGATC 8 cut(s) 997, 1210, 1500, 3732, 3784, 3797, 4022, 4035
BspQI GCTCTTC 3 cut(s) 1658, 1755, 3460
BspT104I TTCGAA 1 cut(s) 2142
BsrDI GCAATG 1 cut(s) 1905
BsrGI TGTACA 4 cut(s) 103, 1971, 3350, 3799
BsrI ACTGG 9 cut(s) 324, 360, 616, 2320, 2344, 2971, 3301, 3632, 3877
BssECI CCNNGG 9 cut(s) 728, 1006, 1426, 1726, 2102, 3367, 3410, 3508, 3580
BssNAI GTATAC 1 cut(s) 182
BssT1I CCWWGG 1 cut(s) 1726
Bst1107I GTATAC 1 cut(s) 182
Bst6I CTCTTC 7 cut(s) 752, 1393, 1658, 1755, 2065, 2740, 3460
BstAUI TGTACA 4 cut(s) 103, 1971, 3350, 3799
BstBI TTCGAA 1 cut(s) 2142
BstC8I GCNNGC 8 cut(s) 162, 376, 1423, 1575, 1665, 2660, 3266, 3984
BstDSI CCRYGG 1 cut(s) 1726
BstEII GGTNACC 1 cut(s) 740
BstFNI CGCG 1 cut(s) 4024
BstHHI GCGC 3 cut(s) 1733, 3287, 4024
BstMAI GTCTC 6 cut(s) 32, 76, 409, 2437, 2769, 4110
BstMWI GCNNNNNNNGC 6 cut(s) 1032, 1579, 2516, 3435, 3621, 3637
BstNSI RCATGY 6 cut(s) 164, 1667, 2200, 2662, 3394, 3758
BstPI GGTNACC 1 cut(s) 740
BstSFI CTRYAG 1 cut(s) 3160
BstUI CGCG 1 cut(s) 4024
BstV1I GCAGC 3 cut(s) 246, 2448, 4045
BstV2I GAAGAC 1 cut(s) 1259
BstX2I RGATCY 2 cut(s) 3789, 4027
BstXI CCANNNNNNTGG 1 cut(s) 4141
BstYI RGATCY 2 cut(s) 3789, 4027
BstZ17I GTATAC 1 cut(s) 182
BsuI GTATCC 3 cut(s) 1185, 1229, 3091
BsuRI GGCC 8 cut(s) 309, 408, 1065, 1353, 2025, 2970, 3268, 3429
BtgI CCRYGG 1 cut(s) 1726
BtgZI GCGATG 1 cut(s) 615
BtrI CACGTC 1 cut(s) 1489
BtsIMutI CAGTG 5 cut(s) 186, 1941, 2313, 3870, 4060
Cac8I GCNNGC 8 cut(s) 162, 376, 1423, 1575, 1665, 2660, 3266, 3984
CaiI CAGNNNCTG 3 cut(s) 1012, 3334, 3627
CciI TCATGA 3 cut(s) 391, 1842, 3493
CfoI GCGC 3 cut(s) 1733, 3287, 4024
Cfr13I GGNCC 3 cut(s) 258, 283, 2024
Cfr9I CCCGGG 1 cut(s) 3410
CseI GACGC 1 cut(s) 2971
CsiI ACCWGGT 2 cut(s) 207, 2409
CspCI CAANNNNNGTGG 2 cut(s) 1892, 1927
DraI TTTAAA 2 cut(s) 1392, 2943
Eam1104I CTCTTC 7 cut(s) 752, 1393, 1658, 1755, 2065, 2740, 3460
EarI CTCTTC 7 cut(s) 752, 1393, 1658, 1755, 2065, 2740, 3460
EciI GGCGGA 1 cut(s) 4099
Eco130I CCWWGG 1 cut(s) 1726
Eco147I AGGCCT 2 cut(s) 408, 1065
Eco32I GATATC 1 cut(s) 2231
Eco47I GGWCC 2 cut(s) 258, 283
Eco57I CTGAAG 6 cut(s) 6, 503, 1273, 1320, 1639, 3471
Eco88I CYCGRG 1 cut(s) 3410
Eco91I GGTNACC 1 cut(s) 740
EcoO109I RGGNCCY 1 cut(s) 283
EcoO65I GGTNACC 1 cut(s) 740
EcoRI GAATTC 2 cut(s) 2607, 2790
EcoRV GATATC 1 cut(s) 2231
EcoT14I CCWWGG 1 cut(s) 1726
EcoT22I ATGCAT 6 cut(s) 61, 166, 228, 1516, 2049, 2263
ErhI CCWWGG 1 cut(s) 1726
FalI AAGNNNNNCTT 4 cut(s) 2123, 2155, 3550, 3582
FaqI GGGAC 5 cut(s) 271, 324, 1023, 2526, 3345
FauI CCCGC 1 cut(s) 4017
FbaI TGATCA 2 cut(s) 915, 1885
FblI GTMKAC 1 cut(s) 181
Fnu4HI GCNGC 3 cut(s) 235, 2437, 4059
Fsp4HI GCNGC 3 cut(s) 235, 2437, 4059
FspI TGCGCA 1 cut(s) 3286
GlaI GCGC 3 cut(s) 1732, 3286, 4023
GluI GCNGC 3 cut(s) 235, 2437, 4059
GsuI CTGGAG 1 cut(s) 1188
HaeIII GGCC 8 cut(s) 309, 408, 1065, 1353, 2025, 2970, 3268, 3429
HapII CCGG 5 cut(s) 1544, 2293, 3084, 3411, 3659
HgaI GACGC 1 cut(s) 2971
HhaI GCGC 3 cut(s) 1733, 3287, 4024
Hin6I GCGC 3 cut(s) 1731, 3285, 4022
HinP1I GCGC 3 cut(s) 1731, 3285, 4022
HincII GTYRAC 2 cut(s) 3687, 3888
HindII GTYRAC 2 cut(s) 3687, 3888
HindIII AAGCTT 3 cut(s) 1115, 2320, 3980
HpaI GTTAAC 2 cut(s) 3687, 3888
HpaII CCGG 5 cut(s) 1544, 2293, 3084, 3411, 3659
HphI GGTGA 2 cut(s) 629, 2053
Hpy99I CGWCG 2 cut(s) 1677, 3620
HpyCH4IV ACGT 2 cut(s) 1488, 2110
HpyF10VI GCNNNNNNNGC 6 cut(s) 1032, 1579, 2516, 3435, 3621, 3637
HpySE526I ACGT 2 cut(s) 1488, 2110
HspAI GCGC 3 cut(s) 1731, 3285, 4022
Ksp22I TGATCA 2 cut(s) 915, 1885
KspAI GTTAAC 2 cut(s) 3687, 3888
LguI GCTCTTC 3 cut(s) 1658, 1755, 3460
LmnI GCTCC 4 cut(s) 1169, 1380, 2098, 2754
Lsp1109I GCAGC 3 cut(s) 246, 2448, 4045
MabI ACCWGGT 2 cut(s) 207, 2409
MaeII ACGT 2 cut(s) 1488, 2110
MaeIII GTNAC 9 cut(s) 486, 617, 740, 1600, 1694, 2014, 2215, 3299, 4010
MfeI CAATTG 5 cut(s) 399, 1686, 2019, 2175, 2977
MflI RGATCY 2 cut(s) 3789, 4027
MhlI GDGCHC 2 cut(s) 3133, 4050
MlyI GAGTC 5 cut(s) 1082, 2129, 2606, 2771, 4139
MmeI TCCRAC 3 cut(s) 614, 2339, 2360
Mph1103I ATGCAT 6 cut(s) 61, 166, 228, 1516, 2049, 2263
MroXI GAANNNNTTC 5 cut(s) 1162, 1652, 1824, 2079, 2331
MslI CAYNNNNRTG 4 cut(s) 1020, 2505, 3318, 3342
MspA1I CMGCKG 1 cut(s) 964
MspI CCGG 5 cut(s) 1544, 2293, 3084, 3411, 3659
MunI CAATTG 5 cut(s) 399, 1686, 2019, 2175, 2977
Mva1269I GAATGC 2 cut(s) 1612, 3266
MvnI CGCG 1 cut(s) 4024
MwoI GCNNNNNNNGC 6 cut(s) 1032, 1579, 2516, 3435, 3621, 3637
NciI CCSGG 4 cut(s) 1545, 3411, 3412, 3660
NcoI CCATGG 1 cut(s) 1726
NheI GCTAGC 1 cut(s) 1421
NlaIV GGNNCC 9 cut(s) 259, 945, 1059, 2026, 2100, 3423, 3791, 4029, 4146
NmuCI GTSAC 2 cut(s) 617, 2215
NsbI TGCGCA 1 cut(s) 3286
NsiI ATGCAT 6 cut(s) 61, 166, 228, 1516, 2049, 2263
NspI RCATGY 6 cut(s) 164, 1667, 2200, 2662, 3394, 3758
NspV TTCGAA 1 cut(s) 2142
PaeI GCATGC 3 cut(s) 164, 1667, 2662
PagI TCATGA 3 cut(s) 391, 1842, 3493
PceI AGGCCT 2 cut(s) 408, 1065
PciI ACATGT 1 cut(s) 3390
PciSI GCTCTTC 3 cut(s) 1658, 1755, 3460
PctI GAATGC 2 cut(s) 1612, 3266
PdmI GAANNNNTTC 5 cut(s) 1162, 1652, 1824, 2079, 2331
PflMI CCANNNNNTGG 2 cut(s) 2966, 4038
PfoI TCCNGGA 1 cut(s) 1543
PkrI GCNGC 3 cut(s) 236, 2438, 4060
PleI GAGTC 5 cut(s) 1081, 2129, 2605, 2770, 4138
PpsI GAGTC 5 cut(s) 1081, 2129, 2605, 2770, 4138
PpuMI RGGWCCY 1 cut(s) 283
PscI ACATGT 1 cut(s) 3390
PshBI ATTAAT 2 cut(s) 384, 1182
PsiI TTATAA 2 cut(s) 123, 1085
Psp5II RGGWCCY 1 cut(s) 283
PspEI GGTNACC 1 cut(s) 740
PspN4I GGNNCC 9 cut(s) 259, 945, 1059, 2026, 2100, 3423, 3791, 4029, 4146
PspPI GGNCC 3 cut(s) 258, 283, 2024
PspPPI RGGWCCY 1 cut(s) 283
PstNI CAGNNNCTG 3 cut(s) 1012, 3334, 3627
PsuI RGATCY 2 cut(s) 3789, 4027
PvuII CAGCTG 1 cut(s) 964
RseI CAYNNNNRTG 4 cut(s) 1020, 2505, 3318, 3342
SapI GCTCTTC 3 cut(s) 1658, 1755, 3460
SatI GCNGC 3 cut(s) 235, 2437, 4059
Sau96I GGNCC 3 cut(s) 258, 283, 2024
ScaI AGTACT 1 cut(s) 2148
SchI GAGTC 5 cut(s) 1082, 2129, 2606, 2771, 4139
SduI GDGCHC 2 cut(s) 3133, 4050
SexAI ACCWGGT 2 cut(s) 207, 2409
SfcI CTRYAG 1 cut(s) 3160
SfuI TTCGAA 1 cut(s) 2142
SinI GGWCC 2 cut(s) 258, 283
SmaI CCCGGG 1 cut(s) 3412
SmiMI CAYNNNNRTG 4 cut(s) 1020, 2505, 3318, 3342
SmlI CTYRAG 4 cut(s) 410, 2224, 2440, 3241
SmoI CTYRAG 4 cut(s) 410, 2224, 2440, 3241
SphI GCATGC 3 cut(s) 164, 1667, 2662
SseBI AGGCCT 2 cut(s) 408, 1065
SsiI CCGC 2 cut(s) 4024, 4110
SspI AATATT 6 cut(s) 451, 472, 1324, 2451, 2674, 4138
StuI AGGCCT 2 cut(s) 408, 1065
StyI CCWWGG 1 cut(s) 1726
TaiI ACGT 2 cut(s) 1491, 2113
TaqI TCGA 7 cut(s) 1482, 1500, 1621, 1672, 1875, 2142, 3036
TscAI CASTG 5 cut(s) 193, 1948, 2320, 3877, 4060
TseFI GTSAC 2 cut(s) 617, 2215
TseI GCWGC 3 cut(s) 234, 2436, 4058
Tsp45I GTSAC 2 cut(s) 617, 2215
TspMI CCCGGG 1 cut(s) 3410
TspRI CASTG 5 cut(s) 193, 1948, 2320, 3877, 4060
Van91I CCANNNNNTGG 2 cut(s) 2966, 4038
VpaK11BI GGWCC 2 cut(s) 258, 283
VspI ATTAAT 2 cut(s) 384, 1182
XapI RAATTY 6 cut(s) 585, 733, 1295, 2330, 2607, 2790
XbaI TCTAGA 3 cut(s) 346, 2611, 3001
XceI RCATGY 6 cut(s) 164, 1667, 2200, 2662, 3394, 3758
XcmI CCANNNNNNNNNTGG 2 cut(s) 2035, 2600
XmaI CCCGGG 1 cut(s) 3410
XmiI GTMKAC 1 cut(s) 181
XmnI GAANNNNTTC 5 cut(s) 1162, 1652, 1824, 2079, 2331
ZrmI AGTACT 1 cut(s) 2148
Zsp2I ATGCAT 6 cut(s) 61, 166, 228, 1516, 2049, 2263
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.