Rh6BG260700

TMV resistance protein N-like

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6B
Physical Location & Seq
Forward (+)
47443247 .. 47444846
1600 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6BG260700.1

Sequence Viewer

Length: 1332 bp
ATGTGCCCACATCCGATTCTAGAAATTTCTTGGGCTTCTTATCTTCCACGGAATTTAATATACTTGAGTCTAAGAAACTGCAATCTTTTGGATGATGACTTTCCTAGAGATGTTGCTAATCTATTGTCATTGCAAAAATTGGATCTCAGCGGGAACCCTATTTCTAGGCTACCGGATTGCATAAGAGGTGTTACTGGCCTCCAAGAACTCGTTTTGAACGATTGTACCAAGCTCAAATCTCTTCTAAGGCTATCAGCAGAATCACTTGATTTGCGTGTGGTCGGGTGCACATCATTGGAAAAAGTAACATTTCAATCTTCTTTGGGAGGATGGTCTTATTGGGGGTCCAACGTTAACCTTGTTGAGTTACAGGATAATTTCAAATTGGAACCCATTGAAAGAGTTGATAAAGAAATGCTAAAACTTTTGAGTCTAGGCAACCTGGAAACCTTGGAAAACATTTTGATGGACAGTACTGGATCTGTTTCTGAATGGAAGGGAACACATCCCGTCCAGGGACTGTACGAAGATGGTATATTCCGCACATTCCTTCCTGGAGACGAAGTTCCAGGCCAGTTCAGCCATAGAAGCAGAGGGTCCTCTGTATCCTTTACTGTGCCTTTACTTCCCAATCTCAATATACGAGGGCTGAATGTCTTCTCGGTCATAGCACAATCCAACAACAATGATTCTGATCCTTTGACCAATATTGTTAATATTGACGGTTCAGATTATTCGACAATTACCGTTGTGATTAATAAGAGCAAGGGGCTGAAGTGGATCTATGGTCCAGCATTCTCTGGCGTTCCAGGTGAAGGAAAAGATGTGATATGGTTAAGTCACTGGAAGTTTGGGAATCGACTTACATGTGGTGATGAGGTAACTATTTTAATATATACGAATTCTGATTTCAAGGTAAAGGAGTGTGGCATCCAGCTTGTTTACTACGATGAGAAAGATCATGTGGCTTCGATCACAGACGATCCTTGTTTTCTCCGAGCTGGAGTTCGGTCAACAATACCCTGTCATCCGAGGGAGGGAGGAAAAACCTTCCTATGCTTTTACGGATCACCAGAAGGAAAAGGATTTCATAAAAATATTGACCTCATTAGGGATATCAATGAAAAATCAGAGAAAGAAGAAGGGCAAGACGGTGACCTCGTCCTCACTCTTGCAGCACAAAGTGGCAGCAATAACAATAAACGAGGTTTGATCAGCAGAGGTTGGAAGGGGATCATGATGGCCACCATCCTCATTCTTTCTCTTCCTCTGGTTGCTCGCTCTTCTCTCTTCCAGCAGCGAAAGAAACAACAGTCCACAAGCCCTCCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

443

Amino Acids

49.18

Weight (kDa)

5.89

Isoelectric Point (pI)

43.42

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 19 - 167 5.4e-07 Leucine-rich repeat region
LRR_4 PF12799 43 - 81 1e-05 Leucine Rich repeats (2 copies)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000036)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G57630 AT1G72930 AT5G38344
fragaria_vesca FvH4_1g27020 FvH4_2g00931 FvH4_2g17330 FvH4_2g17330 FvH4_2g17340 FvH4_2g17350 FvH4_2g20690 FvH4_5g15301 FvH4_5g34194 FvH4_5g38530 FvH4_5g38740 FvH4_5g38740 FvH4_5g38740 FvH4_6g03800 FvH4_7g09791 FvH4_7g09800 FvH4_7g09800 FvH4_7g10510 FvH4_7g10520 FvH4_7g10520 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750
malus_domestica MD02G1217100.v1.1 MD02G1217200.v1.1 MD02G1217400.v1.1 MD02G1217600.v1.1 MD02G1264800.v1.1 MD02G1264900.v1.1 MD02G1302100.v1.1 MD04G1010700.v1.1 MD05G1006800.v1.1 MD05G1140100.v1.1 MD05G1140200.v1.1 MD05G1152200.v1.1 MD07G1073500.v1.1 MD07G1101700.v1.1 MD07G1102200.v1.1 MD07G1103200.v1.1 MD07G1112300.v1.1 MD08G1018200.v1.1 MD08G1018400.v1.1 MD08G1018800.v1.1 MD08G1019000.v1.1 MD08G1019100.v1.1 MD08G1019200.v1.1 MD08G1019300.v1.1 MD08G1019400.v1.1 MD08G1019600.v1.1 MD08G1019900.v1.1 MD08G1020000.v1.1 MD08G1020200.v1.1 MD08G1020500.v1.1 MD08G1020700.v1.1 MD08G1020800.v1.1 MD08G1040700.v1.1 MD11G1112400.v1.1 MD12G1068600.v1.1 MD12G1193200.v1.1 MD13G1050600.v1.1 MD15G1374900.v1.1 MD15G1375100.v1.1 MD15G1416500.v1.1 MD17G1072500.v1.1 MD17G1274200.v1.1 MD17G1274900.v1.1
prunus_persica Prupe.2G121000_v2.0.a1 Prupe.2G121000_v2.0.a1 Prupe.2G125800_v2.0.a1 Prupe.2G126000_v2.0.a1 Prupe.2G126100_v2.0.a1 Prupe.2G126200_v2.0.a1 Prupe.2G126300_v2.0.a1 Prupe.2G126400_v2.0.a1 Prupe.2G126500_v2.0.a1 Prupe.2G126600_v2.0.a1 Prupe.2G126700_v2.0.a1 Prupe.2G126700_v2.0.a1 Prupe.2G126800_v2.0.a1 Prupe.2G126900_v2.0.a1 Prupe.2G127000_v2.0.a1 Prupe.2G127000_v2.0.a1 Prupe.2G127000_v2.0.a1 Prupe.2G127000_v2.0.a1 Prupe.2G135500_v2.0.a1 Prupe.2G135600_v2.0.a1 Prupe.2G135700_v2.0.a1 Prupe.2G135700_v2.0.a1 Prupe.3G009800_v2.0.a1 Prupe.3G010200_v2.0.a1 Prupe.3G131000_v2.0.a1 Prupe.4G260800_v2.0.a1 Prupe.4G260900_v2.0.a1 Prupe.6G083100_v2.0.a1 Prupe.6G083200_v2.0.a1 Prupe.6G083400_v2.0.a1 Prupe.6G132100_v2.0.a1 Prupe.8G184900_v2.0.a1 Prupe.8G185200_v2.0.a1 Prupe.8G185300_v2.0.a1
pyrus_communis pycom02g17870 pycom02g17880 pycom02g19520 pycom02g22610 pycom02g22630 pycom02g22680 pycom05g13540 pycom05g14680 pycom07g04880 pycom07g04890 pycom07g05690 pycom07g05710 pycom07g05720 pycom07g05750 pycom07g05780 pycom07g06300 pycom07g08320 pycom07g08330 pycom07g08350 pycom07g08360 pycom07g08370 pycom07g08410 pycom07g08420 pycom07g08430 pycom07g08440 pycom07g08470 pycom07g08480 pycom07g08520 pycom07g08550 pycom07g08560 pycom07g08640 pycom07g08660 pycom07g08670 pycom07g08680 pycom07g08690 pycom07g08720 pycom07g08730 pycom07g08790 pycom07g08800 pycom07g08810 pycom07g08860 pycom07g08890 pycom07g09720 pycom08g01590 pycom08g01600 pycom08g01620 pycom08g01630 pycom08g01640 pycom10g12630 pycom15g16490 pycom17g07200 pycom17g07210 pycom17g07220 pycom17g11730 pycom17g11740 pycom17g27340 pycom17g27380
rosa_chinensis RchiOBHm_Chr1g0342571 RchiOBHm_Chr1g0346231 RchiOBHm_Chr1g0346831 RchiOBHm_Chr1g0346891 RchiOBHm_Chr1g0348311 RchiOBHm_Chr1g0348321 RchiOBHm_Chr1g0348331 RchiOBHm_Chr1g0348361 RchiOBHm_Chr1g0348371 RchiOBHm_Chr1g0348381 RchiOBHm_Chr1g0348401 RchiOBHm_Chr1g0348411 RchiOBHm_Chr1g0348421 RchiOBHm_Chr1g0348431 RchiOBHm_Chr2g0130881 RchiOBHm_Chr3g0487331 RchiOBHm_Chr5g0060371 RchiOBHm_Chr6g0246491 RchiOBHm_Chr6g0246871 RchiOBHm_Chr6g0250311 RchiOBHm_Chr6g0250781 RchiOBHm_Chr6g0251431 RchiOBHm_Chr6g0281871 RchiOBHm_Chr6g0281881 RchiOBHm_Chr6g0281931 RchiOBHm_Chr6g0281941 RchiOBHm_Chr6g0281951 RchiOBHm_Chr6g0281971 RchiOBHm_Chr6g0281981 RchiOBHm_Chr7g0240541 RchiOBHm_Chr7g0240631 RchiOBHm_Chr7g0240671
rosa_laevigata RLG00000000627 RLG00000000631 RLG00000000641 RLG00000000645 RLG00000000652 RLG00000000662 RLG00000000663 RLG00000000667 RLG00000000670 RLG00000000702 RLG00000001216 RLG00000001219 RLG00000007678 RLG00000012923 RLG00000012996 RLG00000013243 RLG00000017513 RLG00000017514 RLG00000020936 RLG00000022755 RLG00000023013 RLG00000028646 RLG00000028654 RLG00000028662 RLG00000028665 RLG00000028667 RLG00000028711 RLG00000028714 RLG00000028716 RLG00000028770 RLG00000028771 RLG00000028773 RLG00000028778 RLG00000028798 RLG00000028809 RLG00000028813 RLG00000029334 RLG00000030003 RLG00000033910 RLG00000034358 RLG00000035430
rosa_multiflora Rmu_co8031134.1_g000001 Rmu_co8092796.1_g000001 Rmu_co8130156.1_g000001 Rmu_co8325323.1_g000001 Rmu_co8424083.1_g000002 Rmu_sc0000008.1_g000003 Rmu_sc0000008.1_g000011 Rmu_sc0000008.1_g000015 Rmu_sc0000008.1_g000020 Rmu_sc0000091.1_g000015 Rmu_sc0000091.1_g000018 Rmu_sc0000091.1_g000029 Rmu_sc0000091.1_g000031 Rmu_sc0000391.1_g000004 Rmu_sc0001070.1_g000030 Rmu_sc0001293.1_g000016 Rmu_sc0001674.1_g000006 Rmu_sc0001731.1_g000002 Rmu_sc0001731.1_g000003 Rmu_sc0001731.1_g000005 Rmu_sc0001911.1_g000029 Rmu_sc0001913.1_g000038 Rmu_sc0001955.1_g000025 Rmu_sc0001992.1_g000022 Rmu_sc0001992.1_g000028 Rmu_sc0001992.1_g000031 Rmu_sc0002517.1_g000013 Rmu_sc0002517.1_g000017 Rmu_sc0002551.1_g000022 Rmu_sc0002551.1_g000029 Rmu_sc0002551.1_g000038 Rmu_sc0002705.1_g000015 Rmu_sc0002705.1_g000016 Rmu_sc0002882.1_g000055 Rmu_sc0003232.1_g000027 Rmu_sc0003363.1_g000037 Rmu_sc0003600.1_g000054 Rmu_sc0003918.1_g000011 Rmu_sc0004395.1_g000011 Rmu_sc0005071.1_g000004 Rmu_sc0005255.1_g000018 Rmu_sc0005327.1_g000004 Rmu_sc0005597.1_g000007 Rmu_sc0007060.1_g000007 Rmu_sc0007310.1_g000003 Rmu_sc0007383.1_g000014 Rmu_sc0007799.1_g000003 Rmu_sc0008477.1_g000016 Rmu_sc0010151.1_g000009 Rmu_sc0011217.1_g000005 Rmu_sc0016269.1_g000006 Rmu_sc0021495.1_g000001 Rmu_sc0027364.1_g000001 Rmu_sc0029432.1_g000001 Rmu_sc0041386.1_g000001 Rmu_ssc0000126.1_g000023 Rmu_ssc0000126.1_g000027
rosa_roxburghii Rroxscaffold_1G00006130 Rroxscaffold_1G00023320 Rroxscaffold_1G00038770 Rroxscaffold_2G00119800 Rroxscaffold_2G00121860 Rroxscaffold_3G00219780 Rroxscaffold_3G00219890 Rroxscaffold_4G00306740 Rroxscaffold_4G00306820 Rroxscaffold_4G00307000 Rroxscaffold_4G00307010 Rroxscaffold_4G00307020 Rroxscaffold_4G00308030 Rroxscaffold_4G00308070 Rroxscaffold_4G00308450 Rroxscaffold_4G00308460 Rroxscaffold_4G00315320 Rroxscaffold_5G00352470 Rroxscaffold_5G00371420 Rroxscaffold_6G00392300 Rroxscaffold_6G00394870 Rroxscaffold_6G00394890 Rroxscaffold_7G00186700 Rroxscaffold_7G00194980 Rroxscaffold_7G00216840
rosa_rugosa Rorug01G0076100 Rorug01G0128100 Rorug01G0149000.1 Rorug01G0149500.1 Rorug01G0180000 Rorug01G0180100 Rorug01G0182900 Rorug01G0184000 Rorug01G0184100 Rorug01G0184300 Rorug01G0184600 Rorug01G0184700 Rorug01G0184700 Rorug01G0184900 Rorug01G0185000 Rorug01G0185100 Rorug01G0189300 Rorug01G0194100 Rorug01G0194100 Rorug01G0194200 Rorug01G0194400 Rorug01G0194400 Rorug01G0194500 Rorug02G0090400 Rorug02G0090400 Rorug03G0233000 Rorug03G0233100 Rorug05G0178600 Rorug05G0178700 Rorug05G0579200 Rorug06G0144100 Rorug06G0144300 Rorug06G0144300 Rorug06G0179300 Rorug06G0208800 Rorug07G0323500 Rorug07G0337000
rosa_samantha Rh1AG046100 Rh1AG201400 Rh1AG201800 Rh1AG202100 Rh1AG202600 Rh1AG211500 Rh1AG211800 Rh1AG212200 Rh1AG212500 Rh1AG212600 Rh1AG214200 Rh1BG168000 Rh1BG168300 Rh1BG168500 Rh1BG177900 Rh1BG178200 Rh1BG178300 Rh1BG178800 Rh1BG178900 Rh1CG080900 Rh1CG183300 Rh1CG186300 Rh1CG186700 Rh1CG187000 Rh1CG187300 Rh1CG193400 Rh1CG195800 Rh1CG196000 Rh1CG196100 Rh1CG196400 Rh1CG196500 Rh1CG196800 Rh1CG198800 Rh1CG442600 Rh1DG086200 Rh1DG155400 Rh1DG156200 Rh1DG194000 Rh1DG194300 Rh1DG194900 Rh1DG197000 Rh1DG198800 Rh1DG199000 Rh1DG199200 Rh1DG202000 Rh1DG203900 Rh1DG207600 Rh1DG207900 Rh1DG208000 Rh1DG208500 Rh1DG208600 Rh1DG208700 Rh3CG339100 Rh5AG106500 Rh5AG264800 Rh5AG265300 Rh5CG302800 Rh5DG277900 Rh6AG257600 Rh6AG257700 Rh6BG260500 Rh6BG260700 Rh6CG259600 Rh6CG259700 Rh6DG252100 Rh7DG126900
rosa_wichuraiana Rw0G005780 Rw0G007540 Rw0G007550 Rw0G007560 Rw0G009390 Rw1G016900 Rw1G016930 Rw1G016940 Rw1G016970 Rw1G017860 Rw1G017890 Rw1G017900 Rw1G017910 Rw1G017920 Rw1G017960 Rw1G017970 Rw1G017980 Rw1G018150 Rw4G000830 Rw5G009290 Rw5G018950 Rw5G024850 Rw5G024870 Rw5G040460 Rw6G022290 Rw7G041020 Rw7G041200 Rw7G041360 Rw7G041450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 150, 541
AclI AACGTT 1 cut(s) 351
AclWI GGATC 7 cut(s) 150, 487, 689, 788, 977, 1075, 1241
AcoI YGGCCR 1 cut(s) 1242
AcsI RAATTY 3 cut(s) 24, 52, 901
AcuI CTGAAG 1 cut(s) 794
AdeI CACNNNGTG 1 cut(s) 1184
AfaI GTAC 3 cut(s) 226, 475, 524
AfiI CCNNNNNNNGG 4 cut(s) 515, 815, 1037, 1111
AflIII ACRYGT 1 cut(s) 866
AgsI TTSAA 5 cut(s) 217, 314, 382, 398, 913
AjnI CCWGG 5 cut(s) 441, 513, 553, 568, 808
AloI GAACNNNNNNTCC 2 cut(s) 549, 581
AluBI AGCT 3 cut(s) 232, 937, 1001
AluI AGCT 3 cut(s) 232, 937, 1001
Alw21I GWGCWC 1 cut(s) 290
Alw26I GTCTC 1 cut(s) 552
Alw44I GTGCAC 1 cut(s) 286
AlwI GGATC 7 cut(s) 150, 487, 689, 788, 977, 1075, 1241
AlwNI CAGNNNCTG 1 cut(s) 520
AoxI GGCC 3 cut(s) 196, 571, 1242
ApaLI GTGCAC 1 cut(s) 286
ApeKI GCWGC 3 cut(s) 1175, 1188, 1297
ApoI RAATTY 3 cut(s) 24, 52, 901
AseI ATTAAT 1 cut(s) 756
Asp700I GAANNNNTTC 1 cut(s) 656
AspS9I GGNCC 3 cut(s) 345, 597, 788
AsuHPI GGTGA 4 cut(s) 824, 884, 1062, 1166
AvaII GGWCC 3 cut(s) 345, 597, 788
BaeGI GKGCMC 2 cut(s) 8, 290
BaeI ACNNNNGTAYC 2 cut(s) 208, 241
BalI TGGCCA 1 cut(s) 1244
BbsI GAAGAC 1 cut(s) 649
Bbv12I GWGCWC 1 cut(s) 290
BbvI GCAGC 3 cut(s) 1187, 1200, 1309
BccI CCATC 5 cut(s) 324, 460, 524, 1234, 1256
BciT130I CCWGG 5 cut(s) 443, 515, 555, 570, 810
BciVI GTATCC 1 cut(s) 616
BclI TGATCA 1 cut(s) 1212
BcoDI GTCTC 1 cut(s) 552
BfaI CTAG 4 cut(s) 20, 105, 165, 434
BfuI GTATCC 1 cut(s) 616
BisI GCNGC 3 cut(s) 1176, 1189, 1298
BlsI GCNGC 3 cut(s) 1177, 1190, 1299
BmcAI AGTACT 1 cut(s) 475
Bme1390I CCNGG 5 cut(s) 443, 515, 555, 570, 810
Bme18I GGWCC 3 cut(s) 345, 597, 788
BmgT120I GGNCC 3 cut(s) 345, 597, 788
BmiI GGNNCC 4 cut(s) 155, 346, 390, 598
BmrFI CCNGG 5 cut(s) 443, 515, 555, 570, 810
BmsI GCATC 1 cut(s) 939
BpiI GAAGAC 1 cut(s) 649
BpmI CTGGAG 2 cut(s) 576, 1023
BpuEI CTTGAG 1 cut(s) 85
BsaBI GATNNNNATC 1 cut(s) 693
BsaJI CCNNGG 4 cut(s) 47, 450, 514, 1031
BsaWI WCCGGW 1 cut(s) 172
BsaXI ACNNNNNCTCC 3 cut(s) 549, 579, 1309
Bsc4I CCNNNNNNNGG 4 cut(s) 515, 815, 1037, 1111
Bse1I ACTGG 4 cut(s) 199, 481, 574, 848
Bse3DI GCAATG 1 cut(s) 128
Bse8I GATNNNNATC 1 cut(s) 693
BseBI CCWGG 5 cut(s) 443, 515, 555, 570, 810
BseDI CCNNGG 4 cut(s) 47, 450, 514, 1031
BseGI GGATG 7 cut(s) 10, 97, 335, 505, 930, 1027, 1248
BseJI GATNNNNATC 1 cut(s) 693
BseLI CCNNNNNNNGG 4 cut(s) 515, 815, 1037, 1111
BseMI GCAATG 1 cut(s) 128
BseMII CTCAG 1 cut(s) 160
BseNI ACTGG 4 cut(s) 199, 481, 574, 848
BseSI GKGCMC 2 cut(s) 8, 290
BseXI GCAGC 3 cut(s) 1187, 1200, 1309
BshFI GGCC 3 cut(s) 198, 573, 1244
BsiHKAI GWGCWC 1 cut(s) 290
BsiSI CCGG 1 cut(s) 173
BslFI GGGAC 1 cut(s) 531
BslI CCNNNNNNNGG 4 cut(s) 515, 815, 1037, 1111
BsmAI GTCTC 1 cut(s) 552
BsmBI CGTCTC 1 cut(s) 552
BsmFI GGGAC 1 cut(s) 531
BsmI GAATGC 1 cut(s) 794
BsnI GGCC 3 cut(s) 198, 573, 1244
Bsp1286I GDGCHC 2 cut(s) 8, 290
BspACI CCGC 2 cut(s) 150, 541
BspANI GGCC 3 cut(s) 198, 573, 1244
BspCNI CTCAG 1 cut(s) 159
BspHI TCATGA 1 cut(s) 1236
BspLI GGNNCC 4 cut(s) 155, 346, 390, 598
BspPI GGATC 7 cut(s) 150, 487, 689, 788, 977, 1075, 1241
BspQI GCTCTTC 1 cut(s) 1288
BsrDI GCAATG 1 cut(s) 128
BsrI ACTGG 4 cut(s) 199, 481, 574, 848
BssECI CCNNGG 4 cut(s) 47, 450, 514, 1031
BssT1I CCWWGG 1 cut(s) 450
Bst2UI CCWGG 5 cut(s) 443, 515, 555, 570, 810
Bst4CI ACNGT 7 cut(s) 473, 522, 616, 725, 748, 1154, 1314
Bst6I CTCTTC 4 cut(s) 246, 1269, 1288, 1295
BstC8I GCNNGC 1 cut(s) 1279
BstDEI CTNAG 3 cut(s) 71, 146, 245
BstDSI CCRYGG 1 cut(s) 47
BstEII GGTNACC 1 cut(s) 1154
BstF5I GGATG 7 cut(s) 10, 97, 335, 505, 930, 1027, 1248
BstMAI GTCTC 1 cut(s) 552
BstMWI GCNNNNNNNGC 2 cut(s) 579, 588
BstNI CCWGG 5 cut(s) 443, 515, 555, 570, 810
BstNSI RCATGY 1 cut(s) 870
BstPI GGTNACC 1 cut(s) 1154
BstSCI CCNGG 5 cut(s) 441, 513, 553, 568, 808
BstSLI GKGCMC 2 cut(s) 8, 290
BstV1I GCAGC 3 cut(s) 1187, 1200, 1309
BstV2I GAAGAC 1 cut(s) 649
BstX2I RGATCY 3 cut(s) 142, 479, 780
BstYI RGATCY 3 cut(s) 142, 479, 780
BsuI GTATCC 1 cut(s) 616
BsuRI GGCC 3 cut(s) 198, 573, 1244
BtgI CCRYGG 1 cut(s) 47
BtsCI GGATG 7 cut(s) 10, 97, 335, 505, 930, 1027, 1248
BtsIMutI CAGTG 1 cut(s) 841
Cac8I GCNNGC 1 cut(s) 1279
CaiI CAGNNNCTG 1 cut(s) 520
CciI TCATGA 1 cut(s) 1236
Cfr13I GGNCC 3 cut(s) 345, 597, 788
Csp6I GTAC 3 cut(s) 225, 474, 523
CviAII CATG 4 cut(s) 867, 962, 1237, 1329
CviQI GTAC 3 cut(s) 225, 474, 523
DdeI CTNAG 3 cut(s) 71, 146, 245
DraIII CACNNNGTG 1 cut(s) 1184
EaeI YGGCCR 1 cut(s) 1242
Eam1104I CTCTTC 4 cut(s) 246, 1269, 1288, 1295
EarI CTCTTC 4 cut(s) 246, 1269, 1288, 1295
Eco130I CCWWGG 1 cut(s) 450
Eco32I GATATC 1 cut(s) 1117
Eco47I GGWCC 3 cut(s) 345, 597, 788
Eco57I CTGAAG 1 cut(s) 794
Eco91I GGTNACC 1 cut(s) 1154
EcoO109I RGGNCCY 1 cut(s) 597
EcoO65I GGTNACC 1 cut(s) 1154
EcoRI GAATTC 1 cut(s) 901
EcoRII CCWGG 5 cut(s) 441, 513, 553, 568, 808
EcoRV GATATC 1 cut(s) 1117
EcoT14I CCWWGG 1 cut(s) 450
ErhI CCWWGG 1 cut(s) 450
Esp3I CGTCTC 1 cut(s) 552
FaeI CATG 4 cut(s) 870, 965, 1240, 1332
FaqI GGGAC 1 cut(s) 531
FatI CATG 4 cut(s) 866, 961, 1236, 1328
FauI CCCGC 1 cut(s) 143
FbaI TGATCA 1 cut(s) 1212
Fnu4HI GCNGC 3 cut(s) 1176, 1189, 1298
FokI GGATG 6 cut(s) 104, 342, 492, 917, 1014, 1235
Fsp4HI GCNGC 3 cut(s) 1176, 1189, 1298
FspBI CTAG 4 cut(s) 20, 105, 165, 434
GluI GCNGC 3 cut(s) 1176, 1189, 1298
GsuI CTGGAG 2 cut(s) 576, 1023
HaeIII GGCC 3 cut(s) 198, 573, 1244
HapII CCGG 1 cut(s) 173
Hin1II CATG 4 cut(s) 870, 965, 1240, 1332
HincII GTYRAC 2 cut(s) 355, 1014
HindII GTYRAC 2 cut(s) 355, 1014
HinfI GANTC 6 cut(s) 16, 67, 260, 430, 689, 856
HpaI GTTAAC 1 cut(s) 355
HpaII CCGG 1 cut(s) 173
HphI GGTGA 4 cut(s) 824, 884, 1062, 1166
Hpy166II GTNNAC 5 cut(s) 288, 355, 943, 1014, 1317
Hpy188I TCNGA 8 cut(s) 15, 490, 694, 730, 907, 998, 1032, 1132
Hpy188III TCNNGA 2 cut(s) 20, 1237
Hpy8I GTNNAC 5 cut(s) 288, 355, 943, 1014, 1317
HpyAV CCTTC 7 cut(s) 490, 560, 809, 1060, 1070, 1136, 1222
HpyCH4III ACNGT 7 cut(s) 473, 522, 616, 725, 748, 1154, 1314
HpyCH4IV ACGT 1 cut(s) 351
HpyCH4V TGCA 5 cut(s) 81, 133, 180, 288, 1175
HpyF10VI GCNNNNNNNGC 2 cut(s) 579, 588
HpyF3I CTNAG 3 cut(s) 71, 146, 245
HpySE526I ACGT 1 cut(s) 351
Hsp92II CATG 4 cut(s) 870, 965, 1240, 1332
Ksp22I TGATCA 1 cut(s) 1212
KspAI GTTAAC 1 cut(s) 355
LguI GCTCTTC 1 cut(s) 1288
Lsp1109I GCAGC 3 cut(s) 1187, 1200, 1309
LweI GCATC 1 cut(s) 939
MaeI CTAG 4 cut(s) 20, 105, 165, 434
MaeII ACGT 1 cut(s) 351
MaeIII GTNAC 6 cut(s) 190, 304, 366, 839, 880, 1154
MboII GAAGA 9 cut(s) 35, 233, 309, 539, 649, 1151, 1256, 1275, 1282
MflI RGATCY 3 cut(s) 142, 479, 780
MhlI GDGCHC 2 cut(s) 8, 290
MlsI TGGCCA 1 cut(s) 1244
MluCI AATT 7 cut(s) 24, 52, 137, 376, 383, 741, 901
MluNI TGGCCA 1 cut(s) 1244
MlyI GAGTC 2 cut(s) 76, 439
MmeI TCCRAC 3 cut(s) 372, 702, 1205
Mox20I TGGCCA 1 cut(s) 1244
MroXI GAANNNNTTC 1 cut(s) 656
MscI TGGCCA 1 cut(s) 1244
MseI TTAA 6 cut(s) 56, 354, 714, 756, 836, 890
MslI CAYNNNNRTG 1 cut(s) 464
Msp20I TGGCCA 1 cut(s) 1244
MspA1I CMGCKG 1 cut(s) 150
MspI CCGG 1 cut(s) 173
MspR9I CCNGG 5 cut(s) 443, 515, 555, 570, 810
Mva1269I GAATGC 1 cut(s) 794
MvaI CCWGG 5 cut(s) 443, 515, 555, 570, 810
MwoI GCNNNNNNNGC 2 cut(s) 579, 588
NlaIII CATG 4 cut(s) 870, 965, 1240, 1332
NlaIV GGNNCC 4 cut(s) 155, 346, 390, 598
NmuCI GTSAC 2 cut(s) 839, 1154
NspI RCATGY 1 cut(s) 870
PagI TCATGA 1 cut(s) 1236
PciI ACATGT 1 cut(s) 866
PciSI GCTCTTC 1 cut(s) 1288
PcsI WCGNNNNNNNCGW 2 cut(s) 216, 1158
PctI GAATGC 1 cut(s) 794
PdmI GAANNNNTTC 1 cut(s) 656
PfeI GAWTC 4 cut(s) 16, 260, 689, 856
PflFI GACNNNGTC 1 cut(s) 1160
PfoI TCCNGGA 1 cut(s) 553
PkrI GCNGC 3 cut(s) 1177, 1190, 1299
PleI GAGTC 2 cut(s) 75, 438
PpsI GAGTC 2 cut(s) 75, 438
PpuMI RGGWCCY 1 cut(s) 597
PscI ACATGT 1 cut(s) 866
PshBI ATTAAT 1 cut(s) 756
Psp1406I AACGTT 1 cut(s) 351
Psp5II RGGWCCY 1 cut(s) 597
Psp6I CCWGG 5 cut(s) 441, 513, 553, 568, 808
PspEI GGTNACC 1 cut(s) 1154
PspGI CCWGG 5 cut(s) 441, 513, 553, 568, 808
PspN4I GGNNCC 4 cut(s) 155, 346, 390, 598
PspPI GGNCC 3 cut(s) 345, 597, 788
PspPPI RGGWCCY 1 cut(s) 597
PstNI CAGNNNCTG 1 cut(s) 520
PsuI RGATCY 3 cut(s) 142, 479, 780
PsyI GACNNNGTC 1 cut(s) 1160
RsaI GTAC 3 cut(s) 226, 475, 524
RsaNI GTAC 3 cut(s) 225, 474, 523
RseI CAYNNNNRTG 1 cut(s) 464
SapI GCTCTTC 1 cut(s) 1288
SaqAI TTAA 6 cut(s) 56, 354, 714, 756, 836, 890
SatI GCNGC 3 cut(s) 1176, 1189, 1298
Sau96I GGNCC 3 cut(s) 345, 597, 788
ScaI AGTACT 1 cut(s) 475
SchI GAGTC 2 cut(s) 76, 439
ScrFI CCNGG 5 cut(s) 443, 515, 555, 570, 810
SduI GDGCHC 2 cut(s) 8, 290
SfaNI GCATC 1 cut(s) 939
SinI GGWCC 3 cut(s) 345, 597, 788
SmiMI CAYNNNNRTG 1 cut(s) 464
SmlI CTYRAG 1 cut(s) 64
SmoI CTYRAG 1 cut(s) 64
Sse9I AATT 7 cut(s) 24, 52, 137, 376, 383, 741, 901
SsiI CCGC 2 cut(s) 150, 541
SspI AATATT 3 cut(s) 709, 718, 1099
SspMI CTAG 4 cut(s) 20, 105, 165, 434
StyD4I CCNGG 5 cut(s) 441, 513, 553, 568, 808
StyI CCWWGG 1 cut(s) 450
TaaI ACNGT 7 cut(s) 473, 522, 616, 725, 748, 1154, 1314
TaiI ACGT 1 cut(s) 354
TaqI TCGA 3 cut(s) 737, 859, 971
TaqII GACCGA 2 cut(s) 652, 999
TasI AATT 7 cut(s) 24, 52, 137, 376, 383, 741, 901
TatI WGTACW 1 cut(s) 473
TfiI GAWTC 4 cut(s) 16, 260, 689, 856
Tru1I TTAA 6 cut(s) 56, 354, 714, 756, 836, 890
Tru9I TTAA 6 cut(s) 56, 354, 714, 756, 836, 890
TscAI CASTG 1 cut(s) 848
TseFI GTSAC 2 cut(s) 839, 1154
TseI GCWGC 3 cut(s) 1175, 1188, 1297
Tsp45I GTSAC 2 cut(s) 839, 1154
TspDTI ATGAA 2 cut(s) 1079, 1137
TspGWI ACGGA 2 cut(s) 64, 1080
TspRI CASTG 1 cut(s) 848
Tth111I GACNNNGTC 1 cut(s) 1160
VneI GTGCAC 1 cut(s) 286
VpaK11BI GGWCC 3 cut(s) 345, 597, 788
VspI ATTAAT 1 cut(s) 756
XapI RAATTY 3 cut(s) 24, 52, 901
XbaI TCTAGA 1 cut(s) 19
XceI RCATGY 1 cut(s) 870
XmnI GAANNNNTTC 1 cut(s) 656
XspI CTAG 4 cut(s) 20, 105, 165, 434
ZrmI AGTACT 1 cut(s) 475
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.