Rw5G009290

TMV resistance protein N-like

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
Physical Location & Seq
Reverse (-)
9970258 .. 9972202
1945 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G009290.1

Sequence Viewer

Length: 1419 bp
ATGGAAATGAGGAATATGATATCTCTGAAAGTTCTTGAAGCCGATGAAGTTCCAATAAATCGAATACTCGCTGGGGAGCTCAAGTCATGGCCACCAATAGATAAACGTATTGATAATTTTTGGGCTTCTTTTCCCTGCACTTTAGTTGAGTTAAGTCTTGCAGACTGCAAACTTTCTGTTGATGCTTTTCCTAGGGATTTTGGTAACTTATCCTCACTGAAGAAACTGTATCTATGTGAGAATCCAATTTGTAGCTTACCTGATTGTATCAGAGGCCTTGGAGGGCTAGATTACCTTGGATTTTCGCGGTGTGTATATCTCAAATCACTTGTAGGGTTACCAAGAGTGAGCAGAGAACTGTTTACCGACGGTTGTGTATCATTGAAAAGGATTACTTTTCAATCGATTTCATGCTTACCAAAGAGTATATCTGCGTATTGTCGGAAGTCCAATGTAGTTGAGATTGGTTACTGGTACAAGTTAGTACCTATTGGATTCGTTGACATAGAAATGATCAACCTTTTGGGCTTGTCCCACTTGAAATCCATTGAACCCGTTTTATTGTCCATCCCTGCAGGACACAGCTCTTCAAATCACCTAATGCTTCCCATCCAGGGACTGTATGAGTATGATATATTCAGCACATTTTTTTATGGAAATGAGGACGAGGTTCCAGGGCAGTTCAGTAATAGATTTGTGGGATCATCCTCAAAATCTTTTACAGTGCCTAATCTCAGGATCCGAGGCTTGAACATCTTCTCTGTCTATAAAAGTTCACATAACTATTCACCTCAGGATGTATTAATTACCGAAATCAACAATAAGAGCAAGCGTCTGAAGTGGATCTATGGGCCTTCATGCTATGGCATTCCAACTGAAGAAAATAATGTGATATGGTTAAGCCACTGGAAGTTGAGGAATCAGTTGGAAGCTGGCGACGAAGTCACTGTTTCAGTACATATGGGTACGCGGTATAGTTGCCTTGAGATAAAAGAGTGGGGATTCGAGATTGTGCATGAGGCAGAAGACGACCAACACGTCACCGCAACAGATGCAAATCTTAATGAGGACGACAATCTTTTGTTAGAAGCCTATCAGGTGGTGCCAGGAACATACTTCCTCCGTGGTGGACCTATGGAATTCAATAGGAGAAATTTTAATCTTTGGTGTCCTTATGAACAATATGCCAAGTACATAGAAAAAGAGACACAATGGAGGGAGATTCACGAAATGCTTCTCTTGTTAACAATTAAAGCAGCGAGAGCCGGCACTAACAGCTGCGGTTGCAGAGAAGGCAAGATCGCCAGGGCCAAGAAGGTCGTCATTGGGGTTTTGTTCTTACATTTTCGTGAAGCTTCACTTCCATTTTCTCTTACAAAAATATTGAGTTTTGTTCTTCCTTTTCTGTATGTTATGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

472

Amino Acids

53.79

Weight (kDa)

6.57

Isoelectric Point (pI)

35.2

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000036)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G57630 AT1G72930 AT5G38344
fragaria_vesca FvH4_1g27020 FvH4_2g00931 FvH4_2g17330 FvH4_2g17330 FvH4_2g17340 FvH4_2g17350 FvH4_2g20690 FvH4_5g15301 FvH4_5g34194 FvH4_5g38530 FvH4_5g38740 FvH4_5g38740 FvH4_5g38740 FvH4_6g03800 FvH4_7g09791 FvH4_7g09800 FvH4_7g09800 FvH4_7g10510 FvH4_7g10520 FvH4_7g10520 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750
malus_domestica MD02G1217100.v1.1 MD02G1217200.v1.1 MD02G1217400.v1.1 MD02G1217600.v1.1 MD02G1264800.v1.1 MD02G1264900.v1.1 MD02G1302100.v1.1 MD04G1010700.v1.1 MD05G1006800.v1.1 MD05G1140100.v1.1 MD05G1140200.v1.1 MD05G1152200.v1.1 MD07G1073500.v1.1 MD07G1101700.v1.1 MD07G1102200.v1.1 MD07G1103200.v1.1 MD07G1112300.v1.1 MD08G1018200.v1.1 MD08G1018400.v1.1 MD08G1018800.v1.1 MD08G1019000.v1.1 MD08G1019100.v1.1 MD08G1019200.v1.1 MD08G1019300.v1.1 MD08G1019400.v1.1 MD08G1019600.v1.1 MD08G1019900.v1.1 MD08G1020000.v1.1 MD08G1020200.v1.1 MD08G1020500.v1.1 MD08G1020700.v1.1 MD08G1020800.v1.1 MD08G1040700.v1.1 MD11G1112400.v1.1 MD12G1068600.v1.1 MD12G1193200.v1.1 MD13G1050600.v1.1 MD15G1374900.v1.1 MD15G1375100.v1.1 MD15G1416500.v1.1 MD17G1072500.v1.1 MD17G1274200.v1.1 MD17G1274900.v1.1
prunus_persica Prupe.2G121000_v2.0.a1 Prupe.2G121000_v2.0.a1 Prupe.2G125800_v2.0.a1 Prupe.2G126000_v2.0.a1 Prupe.2G126100_v2.0.a1 Prupe.2G126200_v2.0.a1 Prupe.2G126300_v2.0.a1 Prupe.2G126400_v2.0.a1 Prupe.2G126500_v2.0.a1 Prupe.2G126600_v2.0.a1 Prupe.2G126700_v2.0.a1 Prupe.2G126700_v2.0.a1 Prupe.2G126800_v2.0.a1 Prupe.2G126900_v2.0.a1 Prupe.2G127000_v2.0.a1 Prupe.2G127000_v2.0.a1 Prupe.2G127000_v2.0.a1 Prupe.2G127000_v2.0.a1 Prupe.2G135500_v2.0.a1 Prupe.2G135600_v2.0.a1 Prupe.2G135700_v2.0.a1 Prupe.2G135700_v2.0.a1 Prupe.3G009800_v2.0.a1 Prupe.3G010200_v2.0.a1 Prupe.3G131000_v2.0.a1 Prupe.4G260800_v2.0.a1 Prupe.4G260900_v2.0.a1 Prupe.6G083100_v2.0.a1 Prupe.6G083200_v2.0.a1 Prupe.6G083400_v2.0.a1 Prupe.6G132100_v2.0.a1 Prupe.8G184900_v2.0.a1 Prupe.8G185200_v2.0.a1 Prupe.8G185300_v2.0.a1
pyrus_communis pycom02g17870 pycom02g17880 pycom02g19520 pycom02g22610 pycom02g22630 pycom02g22680 pycom05g13540 pycom05g14680 pycom07g04880 pycom07g04890 pycom07g05690 pycom07g05710 pycom07g05720 pycom07g05750 pycom07g05780 pycom07g06300 pycom07g08320 pycom07g08330 pycom07g08350 pycom07g08360 pycom07g08370 pycom07g08410 pycom07g08420 pycom07g08430 pycom07g08440 pycom07g08470 pycom07g08480 pycom07g08520 pycom07g08550 pycom07g08560 pycom07g08640 pycom07g08660 pycom07g08670 pycom07g08680 pycom07g08690 pycom07g08720 pycom07g08730 pycom07g08790 pycom07g08800 pycom07g08810 pycom07g08860 pycom07g08890 pycom07g09720 pycom08g01590 pycom08g01600 pycom08g01620 pycom08g01630 pycom08g01640 pycom10g12630 pycom15g16490 pycom17g07200 pycom17g07210 pycom17g07220 pycom17g11730 pycom17g11740 pycom17g27340 pycom17g27380
rosa_chinensis RchiOBHm_Chr1g0342571 RchiOBHm_Chr1g0346231 RchiOBHm_Chr1g0346831 RchiOBHm_Chr1g0346891 RchiOBHm_Chr1g0348311 RchiOBHm_Chr1g0348321 RchiOBHm_Chr1g0348331 RchiOBHm_Chr1g0348361 RchiOBHm_Chr1g0348371 RchiOBHm_Chr1g0348381 RchiOBHm_Chr1g0348401 RchiOBHm_Chr1g0348411 RchiOBHm_Chr1g0348421 RchiOBHm_Chr1g0348431 RchiOBHm_Chr2g0130881 RchiOBHm_Chr3g0487331 RchiOBHm_Chr5g0060371 RchiOBHm_Chr6g0246491 RchiOBHm_Chr6g0246871 RchiOBHm_Chr6g0250311 RchiOBHm_Chr6g0250781 RchiOBHm_Chr6g0251431 RchiOBHm_Chr6g0281871 RchiOBHm_Chr6g0281881 RchiOBHm_Chr6g0281931 RchiOBHm_Chr6g0281941 RchiOBHm_Chr6g0281951 RchiOBHm_Chr6g0281971 RchiOBHm_Chr6g0281981 RchiOBHm_Chr7g0240541 RchiOBHm_Chr7g0240631 RchiOBHm_Chr7g0240671
rosa_laevigata RLG00000000627 RLG00000000631 RLG00000000641 RLG00000000645 RLG00000000652 RLG00000000662 RLG00000000663 RLG00000000667 RLG00000000670 RLG00000000702 RLG00000001216 RLG00000001219 RLG00000007678 RLG00000012923 RLG00000012996 RLG00000013243 RLG00000017513 RLG00000017514 RLG00000020936 RLG00000022755 RLG00000023013 RLG00000028646 RLG00000028654 RLG00000028662 RLG00000028665 RLG00000028667 RLG00000028711 RLG00000028714 RLG00000028716 RLG00000028770 RLG00000028771 RLG00000028773 RLG00000028778 RLG00000028798 RLG00000028809 RLG00000028813 RLG00000029334 RLG00000030003 RLG00000033910 RLG00000034358 RLG00000035430
rosa_multiflora Rmu_co8031134.1_g000001 Rmu_co8092796.1_g000001 Rmu_co8130156.1_g000001 Rmu_co8325323.1_g000001 Rmu_co8424083.1_g000002 Rmu_sc0000008.1_g000003 Rmu_sc0000008.1_g000011 Rmu_sc0000008.1_g000015 Rmu_sc0000008.1_g000020 Rmu_sc0000091.1_g000015 Rmu_sc0000091.1_g000018 Rmu_sc0000091.1_g000029 Rmu_sc0000091.1_g000031 Rmu_sc0000391.1_g000004 Rmu_sc0001070.1_g000030 Rmu_sc0001293.1_g000016 Rmu_sc0001674.1_g000006 Rmu_sc0001731.1_g000002 Rmu_sc0001731.1_g000003 Rmu_sc0001731.1_g000005 Rmu_sc0001911.1_g000029 Rmu_sc0001913.1_g000038 Rmu_sc0001955.1_g000025 Rmu_sc0001992.1_g000022 Rmu_sc0001992.1_g000028 Rmu_sc0001992.1_g000031 Rmu_sc0002517.1_g000013 Rmu_sc0002517.1_g000017 Rmu_sc0002551.1_g000022 Rmu_sc0002551.1_g000029 Rmu_sc0002551.1_g000038 Rmu_sc0002705.1_g000015 Rmu_sc0002705.1_g000016 Rmu_sc0002882.1_g000055 Rmu_sc0003232.1_g000027 Rmu_sc0003363.1_g000037 Rmu_sc0003600.1_g000054 Rmu_sc0003918.1_g000011 Rmu_sc0004395.1_g000011 Rmu_sc0005071.1_g000004 Rmu_sc0005255.1_g000018 Rmu_sc0005327.1_g000004 Rmu_sc0005597.1_g000007 Rmu_sc0007060.1_g000007 Rmu_sc0007310.1_g000003 Rmu_sc0007383.1_g000014 Rmu_sc0007799.1_g000003 Rmu_sc0008477.1_g000016 Rmu_sc0010151.1_g000009 Rmu_sc0011217.1_g000005 Rmu_sc0016269.1_g000006 Rmu_sc0021495.1_g000001 Rmu_sc0027364.1_g000001 Rmu_sc0029432.1_g000001 Rmu_sc0041386.1_g000001 Rmu_ssc0000126.1_g000023 Rmu_ssc0000126.1_g000027
rosa_roxburghii Rroxscaffold_1G00006130 Rroxscaffold_1G00023320 Rroxscaffold_1G00038770 Rroxscaffold_2G00119800 Rroxscaffold_2G00121860 Rroxscaffold_3G00219780 Rroxscaffold_3G00219890 Rroxscaffold_4G00306740 Rroxscaffold_4G00306820 Rroxscaffold_4G00307000 Rroxscaffold_4G00307010 Rroxscaffold_4G00307020 Rroxscaffold_4G00308030 Rroxscaffold_4G00308070 Rroxscaffold_4G00308450 Rroxscaffold_4G00308460 Rroxscaffold_4G00315320 Rroxscaffold_5G00352470 Rroxscaffold_5G00371420 Rroxscaffold_6G00392300 Rroxscaffold_6G00394870 Rroxscaffold_6G00394890 Rroxscaffold_7G00186700 Rroxscaffold_7G00194980 Rroxscaffold_7G00216840
rosa_rugosa Rorug01G0076100 Rorug01G0128100 Rorug01G0149000.1 Rorug01G0149500.1 Rorug01G0180000 Rorug01G0180100 Rorug01G0182900 Rorug01G0184000 Rorug01G0184100 Rorug01G0184300 Rorug01G0184600 Rorug01G0184700 Rorug01G0184700 Rorug01G0184900 Rorug01G0185000 Rorug01G0185100 Rorug01G0189300 Rorug01G0194100 Rorug01G0194100 Rorug01G0194200 Rorug01G0194400 Rorug01G0194400 Rorug01G0194500 Rorug02G0090400 Rorug02G0090400 Rorug03G0233000 Rorug03G0233100 Rorug05G0178600 Rorug05G0178700 Rorug05G0579200 Rorug06G0144100 Rorug06G0144300 Rorug06G0144300 Rorug06G0179300 Rorug06G0208800 Rorug07G0323500 Rorug07G0337000
rosa_samantha Rh1AG046100 Rh1AG201400 Rh1AG201800 Rh1AG202100 Rh1AG202600 Rh1AG211500 Rh1AG211800 Rh1AG212200 Rh1AG212500 Rh1AG212600 Rh1AG214200 Rh1BG168000 Rh1BG168300 Rh1BG168500 Rh1BG177900 Rh1BG178200 Rh1BG178300 Rh1BG178800 Rh1BG178900 Rh1CG080900 Rh1CG183300 Rh1CG186300 Rh1CG186700 Rh1CG187000 Rh1CG187300 Rh1CG193400 Rh1CG195800 Rh1CG196000 Rh1CG196100 Rh1CG196400 Rh1CG196500 Rh1CG196800 Rh1CG198800 Rh1CG442600 Rh1DG086200 Rh1DG155400 Rh1DG156200 Rh1DG194000 Rh1DG194300 Rh1DG194900 Rh1DG197000 Rh1DG198800 Rh1DG199000 Rh1DG199200 Rh1DG202000 Rh1DG203900 Rh1DG207600 Rh1DG207900 Rh1DG208000 Rh1DG208500 Rh1DG208600 Rh1DG208700 Rh3CG339100 Rh5AG106500 Rh5AG264800 Rh5AG265300 Rh5CG302800 Rh5DG277900 Rh6AG257600 Rh6AG257700 Rh6BG260500 Rh6BG260700 Rh6CG259600 Rh6CG259700 Rh6DG252100 Rh7DG126900
rosa_wichuraiana Rw0G005780 Rw0G007540 Rw0G007550 Rw0G007560 Rw0G009390 Rw1G016900 Rw1G016930 Rw1G016940 Rw1G016970 Rw1G017860 Rw1G017890 Rw1G017900 Rw1G017910 Rw1G017920 Rw1G017960 Rw1G017970 Rw1G017980 Rw1G018150 Rw4G000830 Rw5G009290 Rw5G018950 Rw5G024850 Rw5G024870 Rw5G040460 Rw6G022290 Rw7G041020 Rw7G041200 Rw7G041360 Rw7G041450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1037
AccB1I GGYRCC 1 cut(s) 1102
AccII CGCG 2 cut(s) 307, 970
AciI CCGC 4 cut(s) 307, 970, 1044, 1281
AclWI GGATC 4 cut(s) 709, 733, 746, 851
AcoI YGGCCR 1 cut(s) 89
AcsI RAATTY 2 cut(s) 1139, 1153
AcuI CTGAAG 3 cut(s) 239, 857, 897
AfaI GTAC 5 cut(s) 476, 486, 957, 967, 1193
AfiI CCNNNNNNNGG 1 cut(s) 614
AflIII ACRYGT 1 cut(s) 1036
AgsI TTSAA 8 cut(s) 38, 385, 401, 541, 551, 591, 751, 1144
AjiI CACGTC 1 cut(s) 1039
AjnI CCWGG 4 cut(s) 612, 673, 1105, 1304
AluBI AGCT 6 cut(s) 79, 255, 585, 932, 1278, 1355
AluI AGCT 6 cut(s) 79, 255, 585, 932, 1278, 1355
Alw21I GWGCWC 1 cut(s) 81
Alw26I GTCTC 1 cut(s) 1199
AlwI GGATC 4 cut(s) 709, 733, 746, 851
AlwNI CAGNNNCTG 1 cut(s) 619
AoxI GGCC 4 cut(s) 89, 274, 851, 1308
ApeKI GCWGC 2 cut(s) 1256, 1278
ApoI RAATTY 2 cut(s) 1139, 1153
AseI ATTAAT 1 cut(s) 803
Asp700I GAANNNNTTC 2 cut(s) 755, 1233
AspA2I CCTAGG 1 cut(s) 191
AspS9I GGNCC 3 cut(s) 851, 1130, 1308
AsuHPI GGTGA 3 cut(s) 587, 780, 1033
AvaII GGWCC 1 cut(s) 1130
AvrII CCTAGG 1 cut(s) 191
AxyI CCTNAGG 1 cut(s) 792
BalI TGGCCA 1 cut(s) 91
BamHI GGATCC 1 cut(s) 738
BanI GGYRCC 1 cut(s) 1102
BanII GRGCYC 1 cut(s) 81
BbsI GAAGAC 1 cut(s) 1032
Bbv12I GWGCWC 1 cut(s) 81
BbvI GCAGC 2 cut(s) 1265, 1268
BccI CCATC 2 cut(s) 575, 617
BciT130I CCWGG 4 cut(s) 614, 675, 1107, 1306
BclI TGATCA 1 cut(s) 513
BcoDI GTCTC 1 cut(s) 1199
BfaI CTAG 2 cut(s) 192, 287
BfmI CTRYAG 1 cut(s) 573
BisI GCNGC 2 cut(s) 1257, 1279
BlnI CCTAGG 1 cut(s) 191
BlsI GCNGC 2 cut(s) 1258, 1280
Bme1390I CCNGG 4 cut(s) 614, 675, 1107, 1306
Bme18I GGWCC 1 cut(s) 1130
BmgBI CACGTC 1 cut(s) 1039
BmgT120I GGNCC 3 cut(s) 851, 1130, 1308
BmiI GGNNCC 3 cut(s) 672, 740, 1104
BmrFI CCNGG 4 cut(s) 614, 675, 1107, 1306
BmsI GCATC 2 cut(s) 172, 1042
BpiI GAAGAC 1 cut(s) 1032
BpuEI CTTGAG 2 cut(s) 65, 1004
Bsa29I ATCGAT 1 cut(s) 404
BsaBI GATNNNNATC 1 cut(s) 1056
BsaJI CCNNGG 8 cut(s) 191, 277, 295, 613, 674, 742, 1123, 1305
BsaXI ACNNNNNCTCC 2 cut(s) 68, 98
Bsc4I CCNNNNNNNGG 1 cut(s) 614
Bse118I RCCGGY 1 cut(s) 1265
Bse1I ACTGG 2 cut(s) 476, 911
Bse21I CCTNAGG 1 cut(s) 792
Bse8I GATNNNNATC 1 cut(s) 1056
BseBI CCWGG 4 cut(s) 614, 675, 1107, 1306
BseCI ATCGAT 1 cut(s) 404
BseDI CCNNGG 8 cut(s) 191, 277, 295, 613, 674, 742, 1123, 1305
BseGI GGATG 4 cut(s) 567, 609, 704, 802
BseJI GATNNNNATC 1 cut(s) 1056
BseLI CCNNNNNNNGG 1 cut(s) 614
BseMII CTCAG 2 cut(s) 748, 806
BseNI ACTGG 2 cut(s) 476, 911
BseXI GCAGC 2 cut(s) 1265, 1268
BseYI CCCAGC 1 cut(s) 71
BsgI GTGCAG 1 cut(s) 121
Bsh1236I CGCG 2 cut(s) 307, 970
BshFI GGCC 4 cut(s) 91, 276, 853, 1310
BshNI GGYRCC 1 cut(s) 1102
BshVI ATCGAT 1 cut(s) 404
BsiHKAI GWGCWC 1 cut(s) 81
BsiSI CCGG 1 cut(s) 1266
BslFI GGGAC 2 cut(s) 517, 630
BslI CCNNNNNNNGG 1 cut(s) 614
BsmAI GTCTC 1 cut(s) 1199
BsmFI GGGAC 2 cut(s) 517, 630
BsmI GAATGC 1 cut(s) 867
BsnI GGCC 4 cut(s) 91, 276, 853, 1310
Bsp1286I GDGCHC 1 cut(s) 81
Bsp143I GATC 5 cut(s) 513, 701, 738, 843, 1299
BspACI CCGC 4 cut(s) 307, 970, 1044, 1281
BspANI GGCC 4 cut(s) 91, 276, 853, 1310
BspCNI CTCAG 2 cut(s) 747, 805
BspDI ATCGAT 1 cut(s) 404
BspFNI CGCG 2 cut(s) 307, 970
BspLI GGNNCC 3 cut(s) 672, 740, 1104
BspMAI CTGCAG 1 cut(s) 577
BspPI GGATC 4 cut(s) 709, 733, 746, 851
BspQI GCTCTTC 1 cut(s) 592
BspT107I GGYRCC 1 cut(s) 1102
BsrFI RCCGGY 1 cut(s) 1265
BsrI ACTGG 2 cut(s) 476, 911
BssAI RCCGGY 1 cut(s) 1265
BssECI CCNNGG 8 cut(s) 191, 277, 295, 613, 674, 742, 1123, 1305
BssMI GATC 5 cut(s) 513, 701, 738, 843, 1299
BssT1I CCWWGG 3 cut(s) 191, 277, 295
Bst2UI CCWGG 4 cut(s) 614, 675, 1107, 1306
Bst4CI ACNGT 6 cut(s) 228, 360, 371, 621, 724, 949
Bst6I CTCTTC 1 cut(s) 592
BstAPI GCANNNNNTGC 1 cut(s) 1052
BstC8I GCNNGC 3 cut(s) 830, 934, 1267
BstDEI CTNAG 2 cut(s) 734, 792
BstDSI CCRYGG 1 cut(s) 1123
BstEII GGTNACC 1 cut(s) 336
BstF5I GGATG 4 cut(s) 567, 609, 704, 802
BstFNI CGCG 2 cut(s) 307, 970
BstKTI GATC 5 cut(s) 516, 704, 741, 846, 1302
BstMAI GTCTC 1 cut(s) 1199
BstMBI GATC 5 cut(s) 513, 701, 738, 843, 1299
BstMWI GCNNNNNNNGC 5 cut(s) 1052, 1262, 1275, 1284, 1293
BstNI CCWGG 4 cut(s) 614, 675, 1107, 1306
BstPI GGTNACC 1 cut(s) 336
BstSCI CCNGG 4 cut(s) 612, 673, 1105, 1304
BstSFI CTRYAG 1 cut(s) 573
BstUI CGCG 2 cut(s) 307, 970
BstV1I GCAGC 2 cut(s) 1265, 1268
BstV2I GAAGAC 1 cut(s) 1032
BstX2I RGATCY 2 cut(s) 738, 843
BstYI RGATCY 2 cut(s) 738, 843
Bsu15I ATCGAT 1 cut(s) 404
Bsu36I CCTNAGG 1 cut(s) 792
BsuRI GGCC 4 cut(s) 91, 276, 853, 1310
BsuTUI ATCGAT 1 cut(s) 404
BtgI CCRYGG 1 cut(s) 1123
BtrI CACGTC 1 cut(s) 1039
BtsCI GGATG 4 cut(s) 567, 609, 704, 802
BtsIMutI CAGTG 4 cut(s) 215, 729, 904, 945
Cac8I GCNNGC 3 cut(s) 830, 934, 1267
CaiI CAGNNNCTG 1 cut(s) 619
Cfr10I RCCGGY 1 cut(s) 1265
Cfr13I GGNCC 3 cut(s) 851, 1130, 1308
ClaI ATCGAT 1 cut(s) 404
CseI GACGC 1 cut(s) 821
Csp6I GTAC 5 cut(s) 475, 485, 956, 966, 1192
CviAII CATG 4 cut(s) 87, 411, 858, 1016
CviQI GTAC 5 cut(s) 475, 485, 956, 966, 1192
DdeI CTNAG 2 cut(s) 734, 792
DpnI GATC 5 cut(s) 515, 703, 740, 845, 1301
DpnII GATC 5 cut(s) 513, 701, 738, 843, 1299
DrdI GACNNNNNNGTC 1 cut(s) 1037
DseDI GACNNNNNNGTC 1 cut(s) 1037
EaeI YGGCCR 1 cut(s) 89
Eam1104I CTCTTC 1 cut(s) 592
EarI CTCTTC 1 cut(s) 592
Ecl136II GAGCTC 1 cut(s) 79
Eco130I CCWWGG 3 cut(s) 191, 277, 295
Eco147I AGGCCT 1 cut(s) 276
Eco24I GRGCYC 1 cut(s) 81
Eco32I GATATC 1 cut(s) 21
Eco47I GGWCC 1 cut(s) 1130
Eco53kI GAGCTC 1 cut(s) 79
Eco57I CTGAAG 3 cut(s) 239, 857, 897
Eco81I CCTNAGG 1 cut(s) 792
Eco91I GGTNACC 1 cut(s) 336
EcoICRI GAGCTC 1 cut(s) 79
EcoO65I GGTNACC 1 cut(s) 336
EcoRI GAATTC 1 cut(s) 1139
EcoRII CCWGG 4 cut(s) 612, 673, 1105, 1304
EcoRV GATATC 1 cut(s) 21
EcoT14I CCWWGG 3 cut(s) 191, 277, 295
EcoT38I GRGCYC 1 cut(s) 81
ErhI CCWWGG 3 cut(s) 191, 277, 295
FaeI CATG 4 cut(s) 90, 414, 861, 1019
FalI AAGNNNNNCTT 4 cut(s) 379, 411, 1344, 1376
FaqI GGGAC 2 cut(s) 517, 630
FatI CATG 4 cut(s) 86, 410, 857, 1015
FauNDI CATATG 1 cut(s) 960
FbaI TGATCA 1 cut(s) 513
Fnu4HI GCNGC 2 cut(s) 1257, 1279
FokI GGATG 4 cut(s) 554, 596, 691, 809
FriOI GRGCYC 1 cut(s) 81
Fsp4HI GCNGC 2 cut(s) 1257, 1279
FspBI CTAG 2 cut(s) 192, 287
GluI GCNGC 2 cut(s) 1257, 1279
GsaI CCCAGC 1 cut(s) 75
HaeIII GGCC 4 cut(s) 91, 276, 853, 1310
HapII CCGG 1 cut(s) 1266
HgaI GACGC 1 cut(s) 821
Hin1II CATG 4 cut(s) 90, 414, 861, 1019
HincII GTYRAC 2 cut(s) 502, 1245
HindII GTYRAC 2 cut(s) 502, 1245
HindIII AAGCTT 1 cut(s) 1353
HinfI GANTC 5 cut(s) 241, 495, 919, 1002, 1222
HpaI GTTAAC 1 cut(s) 1245
HpaII CCGG 1 cut(s) 1266
HphI GGTGA 3 cut(s) 587, 780, 1033
Hpy166II GTNNAC 5 cut(s) 363, 502, 776, 1130, 1245
Hpy188I TCNGA 5 cut(s) 27, 272, 444, 743, 837
Hpy188III TCNNGA 6 cut(s) 35, 736, 794, 1006, 1226, 1349
Hpy8I GTNNAC 5 cut(s) 363, 502, 776, 1130, 1245
Hpy99I CGWCG 2 cut(s) 371, 941
HpyAV CCTTC 3 cut(s) 864, 1286, 1309
HpyCH4III ACNGT 6 cut(s) 228, 360, 371, 621, 724, 949
HpyCH4IV ACGT 2 cut(s) 106, 1038
HpyCH4V TGCA 7 cut(s) 138, 161, 168, 575, 1015, 1055, 1287
HpyF10VI GCNNNNNNNGC 5 cut(s) 1052, 1262, 1275, 1284, 1293
HpyF3I CTNAG 2 cut(s) 734, 792
HpySE526I ACGT 2 cut(s) 106, 1038
Hsp92II CATG 4 cut(s) 90, 414, 861, 1019
KroI GCCGGC 1 cut(s) 1265
KroNI GCCGGC 1 cut(s) 1267
Ksp22I TGATCA 1 cut(s) 513
KspAI GTTAAC 1 cut(s) 1245
Kzo9I GATC 5 cut(s) 513, 701, 738, 843, 1299
LguI GCTCTTC 1 cut(s) 592
LmnI GCTCC 1 cut(s) 76
Lsp1109I GCAGC 2 cut(s) 1265, 1268
LweI GCATC 2 cut(s) 172, 1042
MaeI CTAG 2 cut(s) 192, 287
MaeII ACGT 2 cut(s) 106, 1038
MaeIII GTNAC 5 cut(s) 203, 336, 467, 943, 1039
MalI GATC 5 cut(s) 515, 703, 740, 845, 1301
MboI GATC 5 cut(s) 513, 701, 738, 843, 1299
MboII GAAGA 6 cut(s) 232, 579, 748, 890, 1037, 1388
MflI RGATCY 2 cut(s) 738, 843
MhlI GDGCHC 1 cut(s) 81
MlsI TGGCCA 1 cut(s) 91
MluCI AATT 6 cut(s) 115, 246, 804, 1139, 1153, 1248
MluNI TGGCCA 1 cut(s) 91
MmeI TCCRAC 3 cut(s) 422, 896, 906
Mox20I TGGCCA 1 cut(s) 91
MroNI GCCGGC 1 cut(s) 1265
MroXI GAANNNNTTC 2 cut(s) 755, 1233
MscI TGGCCA 1 cut(s) 91
MseI TTAA 7 cut(s) 152, 803, 899, 1062, 1158, 1244, 1251
MslI CAYNNNNRTG 2 cut(s) 509, 1347
Msp20I TGGCCA 1 cut(s) 91
MspA1I CMGCKG 1 cut(s) 1278
MspI CCGG 1 cut(s) 1266
MspR9I CCNGG 4 cut(s) 614, 675, 1107, 1306
Mva1269I GAATGC 1 cut(s) 867
MvaI CCWGG 4 cut(s) 614, 675, 1107, 1306
MvnI CGCG 2 cut(s) 307, 970
MwoI GCNNNNNNNGC 5 cut(s) 1052, 1262, 1275, 1284, 1293
NaeI GCCGGC 1 cut(s) 1267
NdeI CATATG 1 cut(s) 960
NdeII GATC 5 cut(s) 513, 701, 738, 843, 1299
NgoMIV GCCGGC 1 cut(s) 1265
NlaIII CATG 4 cut(s) 90, 414, 861, 1019
NlaIV GGNNCC 3 cut(s) 672, 740, 1104
NmuCI GTSAC 2 cut(s) 943, 1039
PceI AGGCCT 1 cut(s) 276
PciSI GCTCTTC 1 cut(s) 592
PcsI WCGNNNNNNNCGW 1 cut(s) 1035
PctI GAATGC 1 cut(s) 867
PdiI GCCGGC 1 cut(s) 1267
PdmI GAANNNNTTC 2 cut(s) 755, 1233
PfeI GAWTC 5 cut(s) 241, 495, 919, 1002, 1222
PflFI GACNNNGTC 1 cut(s) 941
PkrI GCNGC 2 cut(s) 1258, 1280
PshBI ATTAAT 1 cut(s) 803
Psp124BI GAGCTC 1 cut(s) 81
Psp6I CCWGG 4 cut(s) 612, 673, 1105, 1304
PspEI GGTNACC 1 cut(s) 336
PspFI CCCAGC 1 cut(s) 71
PspGI CCWGG 4 cut(s) 612, 673, 1105, 1304
PspN4I GGNNCC 3 cut(s) 672, 740, 1104
PspPI GGNCC 3 cut(s) 851, 1130, 1308
PstI CTGCAG 1 cut(s) 577
PstNI CAGNNNCTG 1 cut(s) 619
PsuI RGATCY 2 cut(s) 738, 843
PsyI GACNNNGTC 1 cut(s) 941
PvuII CAGCTG 1 cut(s) 1278
RsaI GTAC 5 cut(s) 476, 486, 957, 967, 1193
RsaNI GTAC 5 cut(s) 475, 485, 956, 966, 1192
RseI CAYNNNNRTG 2 cut(s) 509, 1347
SacI GAGCTC 1 cut(s) 81
SapI GCTCTTC 1 cut(s) 592
SaqAI TTAA 7 cut(s) 152, 803, 899, 1062, 1158, 1244, 1251
SatI GCNGC 2 cut(s) 1257, 1279
Sau3AI GATC 5 cut(s) 513, 701, 738, 843, 1299
Sau96I GGNCC 3 cut(s) 851, 1130, 1308
SbfI CCTGCAGG 1 cut(s) 577
ScrFI CCNGG 4 cut(s) 614, 675, 1107, 1306
SdaI CCTGCAGG 1 cut(s) 577
SduI GDGCHC 1 cut(s) 81
SfaNI GCATC 2 cut(s) 172, 1042
SfcI CTRYAG 1 cut(s) 573
SinI GGWCC 1 cut(s) 1130
SmiMI CAYNNNNRTG 2 cut(s) 509, 1347
SmlI CTYRAG 2 cut(s) 80, 983
SmoI CTYRAG 2 cut(s) 80, 983
Sse8387I CCTGCAGG 1 cut(s) 577
Sse9I AATT 6 cut(s) 115, 246, 804, 1139, 1153, 1248
SseBI AGGCCT 1 cut(s) 276
SsiI CCGC 4 cut(s) 307, 970, 1044, 1281
SspI AATATT 1 cut(s) 1383
SspMI CTAG 2 cut(s) 192, 287
SstI GAGCTC 1 cut(s) 81
StuI AGGCCT 1 cut(s) 276
StyD4I CCNGG 4 cut(s) 612, 673, 1105, 1304
StyI CCWWGG 3 cut(s) 191, 277, 295
TaaI ACNGT 6 cut(s) 228, 360, 371, 621, 724, 949
TaiI ACGT 2 cut(s) 109, 1041
TaqI TCGA 3 cut(s) 61, 404, 1005
TasI AATT 6 cut(s) 115, 246, 804, 1139, 1153, 1248
TatI WGTACW 2 cut(s) 955, 1191
TfiI GAWTC 5 cut(s) 241, 495, 919, 1002, 1222
Tru1I TTAA 7 cut(s) 152, 803, 899, 1062, 1158, 1244, 1251
Tru9I TTAA 7 cut(s) 152, 803, 899, 1062, 1158, 1244, 1251
TscAI CASTG 4 cut(s) 222, 729, 911, 952
TseFI GTSAC 2 cut(s) 943, 1039
TseI GCWGC 2 cut(s) 1256, 1278
Tsp45I GTSAC 2 cut(s) 943, 1039
TspDTI ATGAA 4 cut(s) 60, 399, 846, 1191
TspGWI ACGGA 1 cut(s) 1112
TspRI CASTG 4 cut(s) 222, 729, 911, 952
Tth111I GACNNNGTC 1 cut(s) 941
VpaK11BI GGWCC 1 cut(s) 1130
VspI ATTAAT 1 cut(s) 803
XapI RAATTY 2 cut(s) 1139, 1153
XmaJI CCTAGG 1 cut(s) 191
XmnI GAANNNNTTC 2 cut(s) 755, 1233
XspI CTAG 2 cut(s) 192, 287
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.