pycom07g08660

TMV resistance protein

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
Physical Location & Seq
Forward (+)
7936083 .. 7939076
2994 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom07g08660.7

Sequence Viewer

Length: 2292 bp
ATGTCTGTTGATCTTCTTCAATTCATCCGATTCGACGATCGAAAATTAAAAACATATGTAAAAGATAAAATAAGTATGTTTTATTTCCTGTCTATTTGCAACTATAGGTGCAATTTTATTTTTAGGACTCTGCCACTAGCAGCCACTAGCCACTTGCTGGAAGTAGATAGGAAGGACCCCATACAACCTTTTGTTTTAATCTCTGCCACTACATGGGAACAACCCTTTTTAAAAAGCATGGGAACAACCCTTTTCATTTATTCATTACTGCAATTTTCCATTGCATTGCATCTAGCAAAGACTAGGTTTTTTTGGTTTGAACATCAATCCGCATCAATGGCTCTCGTGACAACATCTCAAGGAACCTCCTCTGATTCCAAAAAATTTCGGCGTTATCGCTACGACGTGTTCTTGAGCTTCAGAGGCGAAGACACCCGCAAGACGTTTACCGACCACCTATACACAGCCTTGAACAACGCAGGATTTCTCACGTTCCGAGACGATGATGAACTTGAGAGAGGAGAATATATAAGGCCGGGACTGCAGAAAGCGATCCAGCTGTCACGAGCTTCTGTTGTTGTGTTTTCAGAAGATTACGCATCATCCAGATGGTGCCTTGATGAGCTTGTGATGATCCTTGAACGCAAGAGGCCTCCCTCGGACCATGTAGTTTTACCAGTCTTCTACCATGTCGACCCGTCCCACGTGAGGAAGCAGACAGAAAGTATTGGAAAAGCATTTGCAAGACACCAGAAATCTCAATCGCCGGAAAAGGTGAAGGGATGGAGGAAGGCACTTGCAGAGGTTGCAGATCTAGCAGGCATGGTCTTACAAAATCAAGCTGATGGGTATGAGTCAAAGTTTATTGAAAAAATTGTTAAAGTGATTGGAGGCAAGTTAAGTCGCACACCATTGAGCGTTGTACCAAAATTGATTGGAGTCGAATCTCAAGTCAAAGACATCAATTTGTGGTTACAAGATGGATCAACCGATGTCGGTATACTAGTTGTGTATGGCATGTCTGGAGCAGGGAAGACAACCATTGCAAAACATGTTTACAATTCAAACTTTAGAAGCTTTGAAGGAAGTAGTTTCATTGAAAATATCAGCGAAACAGCAAATCGACCAAATGGCTTAGTTCAAATACAAAAGCAACTTCTTTATGATATTTTGAACGACAGAGAAGTGAAAATACATGGTGTTAGTGAGGGACTAAGAAAGATTGAAAGAGCCATAAGCTCTAGAAGAGTGCTTCTTGTTCTTGATGATGTGGACCATATGGACCAATTAGGTGCAGTACTAGAGATGAAAGATCGGTTTTATCCAGGAAGTAAGATACTTATAACAACTAGGCGTGAAAGGTTGCTAAAGGCACATCAAGTTACAAAGGTGCACAAAGTTGGAACTTTGTATTACAATGAGTCTTTAGAGCTTTTCAGTTGGCATGCTTTTCGCCAGGATCATCCCCTTAGAGGTTACATGGAATATTCAGAAAAGGTTGTACACTACTGCGACGGACTTCCATTAGCTCTAAAAGTTTTGGGGTCTTCTTTATCAGGGGAAAGTATAGATGTATGGGAAAGTGCATTGGAGAAGCTAAAAGTTATCCCTAATGGTGAAATCATGAATAAACTAAGAATAAGCTATGACAATTTACAAGATGACCATGACCGGGAATTATTCCTCCACATTGCTTGTTTCCTAATAGGAAGGAACAAAAGCCACATTGTTAGAATACTCGATGGATGTGATTTCTATACAATTGTTGGTATTCAAAATCTCATTGATACATGCTTGGTGACAGTTGATGGATGCAACAATGTGAAAATGCACGACATGATCCGTGACATGGGAAGAGAAATTGTTTGCCACGAATCAAAAGAGTCTGGAAAACGTAGTAGATTATGGCGCCATAAGGATTCTTTCGAAGTACTGAGGGAAAAGAATGGTACACAAACAATTCAAGGTCTTGCCTTGGATATGCGTATGCATCTTGCAAACAGACCAATAAACACAAATGAGACAGTCTTGGAAACCAATGCATTTGAAAGGATGCACAATTTACAACTACTCCATCTTATGCATGTACGGTTGGATGGATGTTATGTAGATTTCCCTACAAGATTAAGATGGCTGTGTTGGCTTGAATTTCCATTGGATTCTATACCTGTTGATCTTACTTTGGAGTGTCTAGTTGTTCTTGAAATGCAACATAGTAGCTTAAGACAAGTCTGGAAAGGAACAAAAGTATGTTACTCTACGCATTTCAATTCATTTTCCTTATTTTGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

764

Amino Acids

87.98

Weight (kDa)

8.55

Isoelectric Point (pI)

45.76

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000036)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G57630 AT1G72930 AT5G38344
fragaria_vesca FvH4_1g27020 FvH4_2g00931 FvH4_2g17330 FvH4_2g17330 FvH4_2g17340 FvH4_2g17350 FvH4_2g20690 FvH4_5g15301 FvH4_5g34194 FvH4_5g38530 FvH4_5g38740 FvH4_5g38740 FvH4_5g38740 FvH4_6g03800 FvH4_7g09791 FvH4_7g09800 FvH4_7g09800 FvH4_7g10510 FvH4_7g10520 FvH4_7g10520 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750
malus_domestica MD02G1217100.v1.1 MD02G1217200.v1.1 MD02G1217400.v1.1 MD02G1217600.v1.1 MD02G1264800.v1.1 MD02G1264900.v1.1 MD02G1302100.v1.1 MD04G1010700.v1.1 MD05G1006800.v1.1 MD05G1140100.v1.1 MD05G1140200.v1.1 MD05G1152200.v1.1 MD07G1073500.v1.1 MD07G1101700.v1.1 MD07G1102200.v1.1 MD07G1103200.v1.1 MD07G1112300.v1.1 MD08G1018200.v1.1 MD08G1018400.v1.1 MD08G1018800.v1.1 MD08G1019000.v1.1 MD08G1019100.v1.1 MD08G1019200.v1.1 MD08G1019300.v1.1 MD08G1019400.v1.1 MD08G1019600.v1.1 MD08G1019900.v1.1 MD08G1020000.v1.1 MD08G1020200.v1.1 MD08G1020500.v1.1 MD08G1020700.v1.1 MD08G1020800.v1.1 MD08G1040700.v1.1 MD11G1112400.v1.1 MD12G1068600.v1.1 MD12G1193200.v1.1 MD13G1050600.v1.1 MD15G1374900.v1.1 MD15G1375100.v1.1 MD15G1416500.v1.1 MD17G1072500.v1.1 MD17G1274200.v1.1 MD17G1274900.v1.1
prunus_persica Prupe.2G121000_v2.0.a1 Prupe.2G121000_v2.0.a1 Prupe.2G125800_v2.0.a1 Prupe.2G126000_v2.0.a1 Prupe.2G126100_v2.0.a1 Prupe.2G126200_v2.0.a1 Prupe.2G126300_v2.0.a1 Prupe.2G126400_v2.0.a1 Prupe.2G126500_v2.0.a1 Prupe.2G126600_v2.0.a1 Prupe.2G126700_v2.0.a1 Prupe.2G126700_v2.0.a1 Prupe.2G126800_v2.0.a1 Prupe.2G126900_v2.0.a1 Prupe.2G127000_v2.0.a1 Prupe.2G127000_v2.0.a1 Prupe.2G127000_v2.0.a1 Prupe.2G127000_v2.0.a1 Prupe.2G135500_v2.0.a1 Prupe.2G135600_v2.0.a1 Prupe.2G135700_v2.0.a1 Prupe.2G135700_v2.0.a1 Prupe.3G009800_v2.0.a1 Prupe.3G010200_v2.0.a1 Prupe.3G131000_v2.0.a1 Prupe.4G260800_v2.0.a1 Prupe.4G260900_v2.0.a1 Prupe.6G083100_v2.0.a1 Prupe.6G083200_v2.0.a1 Prupe.6G083400_v2.0.a1 Prupe.6G132100_v2.0.a1 Prupe.8G184900_v2.0.a1 Prupe.8G185200_v2.0.a1 Prupe.8G185300_v2.0.a1
pyrus_communis pycom02g17870 pycom02g17880 pycom02g19520 pycom02g22610 pycom02g22630 pycom02g22680 pycom05g13540 pycom05g14680 pycom07g04880 pycom07g04890 pycom07g05690 pycom07g05710 pycom07g05720 pycom07g05750 pycom07g05780 pycom07g06300 pycom07g08320 pycom07g08330 pycom07g08350 pycom07g08360 pycom07g08370 pycom07g08410 pycom07g08420 pycom07g08430 pycom07g08440 pycom07g08470 pycom07g08480 pycom07g08520 pycom07g08550 pycom07g08560 pycom07g08640 pycom07g08660 pycom07g08670 pycom07g08680 pycom07g08690 pycom07g08720 pycom07g08730 pycom07g08790 pycom07g08800 pycom07g08810 pycom07g08860 pycom07g08890 pycom07g09720 pycom08g01590 pycom08g01600 pycom08g01620 pycom08g01630 pycom08g01640 pycom10g12630 pycom15g16490 pycom17g07200 pycom17g07210 pycom17g07220 pycom17g11730 pycom17g11740 pycom17g27340 pycom17g27380
rosa_chinensis RchiOBHm_Chr1g0342571 RchiOBHm_Chr1g0346231 RchiOBHm_Chr1g0346831 RchiOBHm_Chr1g0346891 RchiOBHm_Chr1g0348311 RchiOBHm_Chr1g0348321 RchiOBHm_Chr1g0348331 RchiOBHm_Chr1g0348361 RchiOBHm_Chr1g0348371 RchiOBHm_Chr1g0348381 RchiOBHm_Chr1g0348401 RchiOBHm_Chr1g0348411 RchiOBHm_Chr1g0348421 RchiOBHm_Chr1g0348431 RchiOBHm_Chr2g0130881 RchiOBHm_Chr3g0487331 RchiOBHm_Chr5g0060371 RchiOBHm_Chr6g0246491 RchiOBHm_Chr6g0246871 RchiOBHm_Chr6g0250311 RchiOBHm_Chr6g0250781 RchiOBHm_Chr6g0251431 RchiOBHm_Chr6g0281871 RchiOBHm_Chr6g0281881 RchiOBHm_Chr6g0281931 RchiOBHm_Chr6g0281941 RchiOBHm_Chr6g0281951 RchiOBHm_Chr6g0281971 RchiOBHm_Chr6g0281981 RchiOBHm_Chr7g0240541 RchiOBHm_Chr7g0240631 RchiOBHm_Chr7g0240671
rosa_laevigata RLG00000000627 RLG00000000631 RLG00000000641 RLG00000000645 RLG00000000652 RLG00000000662 RLG00000000663 RLG00000000667 RLG00000000670 RLG00000000702 RLG00000001216 RLG00000001219 RLG00000007678 RLG00000012923 RLG00000012996 RLG00000013243 RLG00000017513 RLG00000017514 RLG00000020936 RLG00000022755 RLG00000023013 RLG00000028646 RLG00000028654 RLG00000028662 RLG00000028665 RLG00000028667 RLG00000028711 RLG00000028714 RLG00000028716 RLG00000028770 RLG00000028771 RLG00000028773 RLG00000028778 RLG00000028798 RLG00000028809 RLG00000028813 RLG00000029334 RLG00000030003 RLG00000033910 RLG00000034358 RLG00000035430
rosa_multiflora Rmu_co8031134.1_g000001 Rmu_co8092796.1_g000001 Rmu_co8130156.1_g000001 Rmu_co8325323.1_g000001 Rmu_co8424083.1_g000002 Rmu_sc0000008.1_g000003 Rmu_sc0000008.1_g000011 Rmu_sc0000008.1_g000015 Rmu_sc0000008.1_g000020 Rmu_sc0000091.1_g000015 Rmu_sc0000091.1_g000018 Rmu_sc0000091.1_g000029 Rmu_sc0000091.1_g000031 Rmu_sc0000391.1_g000004 Rmu_sc0001070.1_g000030 Rmu_sc0001293.1_g000016 Rmu_sc0001674.1_g000006 Rmu_sc0001731.1_g000002 Rmu_sc0001731.1_g000003 Rmu_sc0001731.1_g000005 Rmu_sc0001911.1_g000029 Rmu_sc0001913.1_g000038 Rmu_sc0001955.1_g000025 Rmu_sc0001992.1_g000022 Rmu_sc0001992.1_g000028 Rmu_sc0001992.1_g000031 Rmu_sc0002517.1_g000013 Rmu_sc0002517.1_g000017 Rmu_sc0002551.1_g000022 Rmu_sc0002551.1_g000029 Rmu_sc0002551.1_g000038 Rmu_sc0002705.1_g000015 Rmu_sc0002705.1_g000016 Rmu_sc0002882.1_g000055 Rmu_sc0003232.1_g000027 Rmu_sc0003363.1_g000037 Rmu_sc0003600.1_g000054 Rmu_sc0003918.1_g000011 Rmu_sc0004395.1_g000011 Rmu_sc0005071.1_g000004 Rmu_sc0005255.1_g000018 Rmu_sc0005327.1_g000004 Rmu_sc0005597.1_g000007 Rmu_sc0007060.1_g000007 Rmu_sc0007310.1_g000003 Rmu_sc0007383.1_g000014 Rmu_sc0007799.1_g000003 Rmu_sc0008477.1_g000016 Rmu_sc0010151.1_g000009 Rmu_sc0011217.1_g000005 Rmu_sc0016269.1_g000006 Rmu_sc0021495.1_g000001 Rmu_sc0027364.1_g000001 Rmu_sc0029432.1_g000001 Rmu_sc0041386.1_g000001 Rmu_ssc0000126.1_g000023 Rmu_ssc0000126.1_g000027
rosa_roxburghii Rroxscaffold_1G00006130 Rroxscaffold_1G00023320 Rroxscaffold_1G00038770 Rroxscaffold_2G00119800 Rroxscaffold_2G00121860 Rroxscaffold_3G00219780 Rroxscaffold_3G00219890 Rroxscaffold_4G00306740 Rroxscaffold_4G00306820 Rroxscaffold_4G00307000 Rroxscaffold_4G00307010 Rroxscaffold_4G00307020 Rroxscaffold_4G00308030 Rroxscaffold_4G00308070 Rroxscaffold_4G00308450 Rroxscaffold_4G00308460 Rroxscaffold_4G00315320 Rroxscaffold_5G00352470 Rroxscaffold_5G00371420 Rroxscaffold_6G00392300 Rroxscaffold_6G00394870 Rroxscaffold_6G00394890 Rroxscaffold_7G00186700 Rroxscaffold_7G00194980 Rroxscaffold_7G00216840
rosa_rugosa Rorug01G0076100 Rorug01G0128100 Rorug01G0149000.1 Rorug01G0149500.1 Rorug01G0180000 Rorug01G0180100 Rorug01G0182900 Rorug01G0184000 Rorug01G0184100 Rorug01G0184300 Rorug01G0184600 Rorug01G0184700 Rorug01G0184700 Rorug01G0184900 Rorug01G0185000 Rorug01G0185100 Rorug01G0189300 Rorug01G0194100 Rorug01G0194100 Rorug01G0194200 Rorug01G0194400 Rorug01G0194400 Rorug01G0194500 Rorug02G0090400 Rorug02G0090400 Rorug03G0233000 Rorug03G0233100 Rorug05G0178600 Rorug05G0178700 Rorug05G0579200 Rorug06G0144100 Rorug06G0144300 Rorug06G0144300 Rorug06G0179300 Rorug06G0208800 Rorug07G0323500 Rorug07G0337000
rosa_samantha Rh1AG046100 Rh1AG201400 Rh1AG201800 Rh1AG202100 Rh1AG202600 Rh1AG211500 Rh1AG211800 Rh1AG212200 Rh1AG212500 Rh1AG212600 Rh1AG214200 Rh1BG168000 Rh1BG168300 Rh1BG168500 Rh1BG177900 Rh1BG178200 Rh1BG178300 Rh1BG178800 Rh1BG178900 Rh1CG080900 Rh1CG183300 Rh1CG186300 Rh1CG186700 Rh1CG187000 Rh1CG187300 Rh1CG193400 Rh1CG195800 Rh1CG196000 Rh1CG196100 Rh1CG196400 Rh1CG196500 Rh1CG196800 Rh1CG198800 Rh1CG442600 Rh1DG086200 Rh1DG155400 Rh1DG156200 Rh1DG194000 Rh1DG194300 Rh1DG194900 Rh1DG197000 Rh1DG198800 Rh1DG199000 Rh1DG199200 Rh1DG202000 Rh1DG203900 Rh1DG207600 Rh1DG207900 Rh1DG208000 Rh1DG208500 Rh1DG208600 Rh1DG208700 Rh3CG339100 Rh5AG106500 Rh5AG264800 Rh5AG265300 Rh5CG302800 Rh5DG277900 Rh6AG257600 Rh6AG257700 Rh6BG260500 Rh6BG260700 Rh6CG259600 Rh6CG259700 Rh6DG252100 Rh7DG126900
rosa_wichuraiana Rw0G005780 Rw0G007540 Rw0G007550 Rw0G007560 Rw0G009390 Rw1G016900 Rw1G016930 Rw1G016940 Rw1G016970 Rw1G017860 Rw1G017890 Rw1G017900 Rw1G017910 Rw1G017920 Rw1G017960 Rw1G017970 Rw1G017980 Rw1G018150 Rw4G000830 Rw5G009290 Rw5G018950 Rw5G024850 Rw5G024870 Rw5G040460 Rw6G022290 Rw7G041020 Rw7G041200 Rw7G041360 Rw7G041450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1343
AccB1I GGYRCC 2 cut(s) 612, 1908
AccB7I CCANNNNNTGG 2 cut(s) 157, 213
AccI GTMKAC 2 cut(s) 693, 1000
AciI CCGC 2 cut(s) 330, 436
AclWI GGATC 5 cut(s) 547, 628, 991, 1467, 1834
AcsI RAATTY 2 cut(s) 383, 2147
AcuI CTGAAG 1 cut(s) 403
AcvI CACGTG 1 cut(s) 706
AcyI GRCGYC 1 cut(s) 1909
AfaI GTAC 6 cut(s) 924, 1299, 1503, 1932, 1951, 2088
AfiI CCNNNNNNNGG 6 cut(s) 157, 213, 708, 1472, 1672, 1849
AflII CTTAAG 1 cut(s) 2221
AflIII ACRYGT 2 cut(s) 405, 1051
AhlI ACTAGT 1 cut(s) 1003
AjiI CACGTC 1 cut(s) 406
AjnI CCWGG 2 cut(s) 1324, 1455
Alw21I GWGCWC 1 cut(s) 1395
Alw26I GTCTC 2 cut(s) 492, 2015
Alw44I GTGCAC 1 cut(s) 1391
AlwI GGATC 5 cut(s) 547, 628, 991, 1467, 1834
AoxI GGCC 2 cut(s) 533, 650
ApaLI GTGCAC 1 cut(s) 1391
ApeKI GCWGC 1 cut(s) 140
ApoI RAATTY 2 cut(s) 383, 2147
ArsI GACNNNNNNTTYG 2 cut(s) 936, 968
AspLEI GCGC 1 cut(s) 1911
AspS9I GGNCC 4 cut(s) 175, 661, 1273, 1282
AsuC2I CCSGG 2 cut(s) 537, 1673
AsuHPI GGTGA 3 cut(s) 787, 1628, 1810
AsuII TTCGAA 1 cut(s) 1926
AvaII GGWCC 4 cut(s) 175, 661, 1273, 1282
BaeGI GKGCMC 1 cut(s) 1395
BanI GGYRCC 2 cut(s) 612, 1908
BarI GAAGNNNNNNTAC 2 cut(s) 1176, 1208
BauI CACGAG 2 cut(s) 344, 564
BbrPI CACGTG 1 cut(s) 706
BbsI GAAGAC 4 cut(s) 435, 673, 1040, 1539
Bbv12I GWGCWC 1 cut(s) 1395
BbvI GCAGC 1 cut(s) 152
BccI CCATC 9 cut(s) 603, 777, 839, 974, 1736, 1802, 2082, 2090, 2124
BcgI CGANNNNNNTGC 2 cut(s) 1433, 1467
BciT130I CCWGG 2 cut(s) 1326, 1457
BcnI CCSGG 2 cut(s) 537, 1673
BcoDI GTCTC 2 cut(s) 492, 2015
BcuI ACTAGT 1 cut(s) 1003
BfmI CTRYAG 2 cut(s) 103, 542
BfoI RGCGCY 1 cut(s) 1912
BfrI CTTAAG 1 cut(s) 2221
BglII AGATCT 1 cut(s) 811
BisI GCNGC 1 cut(s) 141
BlsI GCNGC 1 cut(s) 142
BmcAI AGTACT 2 cut(s) 1299, 1932
Bme1390I CCNGG 4 cut(s) 537, 1326, 1457, 1673
Bme18I GGWCC 4 cut(s) 175, 661, 1273, 1282
BmgBI CACGTC 1 cut(s) 406
BmgT120I GGNCC 4 cut(s) 175, 661, 1273, 1282
BmiI GGNNCC 4 cut(s) 177, 364, 614, 1910
BmrFI CCNGG 4 cut(s) 537, 1326, 1457, 1673
BmsI GCATC 6 cut(s) 298, 341, 608, 1802, 1999, 2043
BpiI GAAGAC 4 cut(s) 435, 673, 1040, 1539
BpmI CTGGAG 1 cut(s) 1044
Bpu14I TTCGAA 1 cut(s) 1926
BpuEI CTTGAG 4 cut(s) 342, 433, 533, 933
BpuMI CCSGG 2 cut(s) 537, 1673
BsaAI YACGTR 1 cut(s) 706
BsaHI GRCGYC 1 cut(s) 1909
BsaJI CCNNGG 2 cut(s) 657, 1974
BsaXI ACNNNNNCTCC 2 cut(s) 2055, 2085
Bsc4I CCNNNNNNNGG 6 cut(s) 157, 213, 708, 1472, 1672, 1849
Bse1I ACTGG 1 cut(s) 677
Bse3DI GCAATG 4 cut(s) 279, 284, 1041, 1689
BseBI CCWGG 2 cut(s) 1326, 1457
BseDI CCNNGG 2 cut(s) 657, 1974
BseGI GGATG 9 cut(s) 24, 602, 788, 1462, 1751, 1817, 2058, 2101, 2105
BseLI CCNNNNNNNGG 6 cut(s) 157, 213, 708, 1472, 1672, 1849
BseMI GCAATG 4 cut(s) 279, 284, 1041, 1689
BseMII CTCAG 1 cut(s) 1925
BseNI ACTGG 1 cut(s) 677
BseRI GAGGAG 2 cut(s) 358, 534
BseSI GKGCMC 1 cut(s) 1395
BseXI GCAGC 1 cut(s) 152
BsgI GTGCAG 1 cut(s) 1314
Bsh1285I CGRYCG 1 cut(s) 40
BshFI GGCC 2 cut(s) 535, 652
BshNI GGYRCC 2 cut(s) 612, 1908
BsiEI CGRYCG 1 cut(s) 40
BsiHKAI GWGCWC 1 cut(s) 1395
BsiSI CCGG 3 cut(s) 536, 767, 1672
BslFI GGGAC 3 cut(s) 552, 685, 1224
BslI CCNNNNNNNGG 6 cut(s) 157, 213, 708, 1472, 1672, 1849
BsmAI GTCTC 2 cut(s) 492, 2015
BsmBI CGTCTC 1 cut(s) 492
BsmFI GGGAC 3 cut(s) 552, 685, 1224
BsnI GGCC 2 cut(s) 535, 652
Bsp119I TTCGAA 1 cut(s) 1926
Bsp1286I GDGCHC 1 cut(s) 1395
Bsp1407I TGTACA 1 cut(s) 1501
BspACI CCGC 2 cut(s) 330, 436
BspANI GGCC 2 cut(s) 535, 652
BspCNI CTCAG 1 cut(s) 1926
BspHI TCATGA 1 cut(s) 1623
BspLI GGNNCC 4 cut(s) 177, 364, 614, 1910
BspMAI CTGCAG 1 cut(s) 546
BspPI GGATC 5 cut(s) 547, 628, 991, 1467, 1834
BspT104I TTCGAA 1 cut(s) 1926
BspT107I GGYRCC 2 cut(s) 612, 1908
BspTI CTTAAG 1 cut(s) 2221
BsrDI GCAATG 4 cut(s) 279, 284, 1041, 1689
BsrGI TGTACA 1 cut(s) 1501
BsrI ACTGG 1 cut(s) 677
BssECI CCNNGG 2 cut(s) 657, 1974
BssNAI GTATAC 1 cut(s) 1001
BssNI GRCGYC 1 cut(s) 1909
BssSI CACGAG 2 cut(s) 344, 564
BssT1I CCWWGG 1 cut(s) 1974
Bst1107I GTATAC 1 cut(s) 1001
Bst2BI CACGAG 2 cut(s) 344, 564
Bst2UI CCWGG 2 cut(s) 1326, 1457
Bst4CI ACNGT 3 cut(s) 1804, 2026, 2091
Bst6I CTCTTC 2 cut(s) 1240, 1849
BstACI GRCGYC 1 cut(s) 1909
BstAFI CTTAAG 1 cut(s) 2221
BstAPI GCANNNNNTGC 1 cut(s) 806
BstAUI TGTACA 1 cut(s) 1501
BstBAI YACGTR 1 cut(s) 706
BstBI TTCGAA 1 cut(s) 1926
BstC8I GCNNGC 2 cut(s) 820, 1446
BstDEI CTNAG 5 cut(s) 1135, 1214, 1469, 1634, 1934
BstF5I GGATG 9 cut(s) 24, 602, 788, 1462, 1751, 1817, 2058, 2101, 2105
BstH2I RGCGCY 1 cut(s) 1912
BstHHI GCGC 1 cut(s) 1911
BstMAI GTCTC 2 cut(s) 492, 2015
BstMCI CGRYCG 1 cut(s) 40
BstMWI GCNNNNNNNGC 6 cut(s) 338, 423, 541, 806, 815, 2140
BstNI CCWGG 2 cut(s) 1326, 1457
BstNSI RCATGY 5 cut(s) 1021, 1055, 1448, 1794, 2087
BstSCI CCNGG 4 cut(s) 535, 1324, 1455, 1671
BstSFI CTRYAG 2 cut(s) 103, 542
BstSLI GKGCMC 1 cut(s) 1395
BstV1I GCAGC 1 cut(s) 152
BstV2I GAAGAC 4 cut(s) 435, 673, 1040, 1539
BstX2I RGATCY 1 cut(s) 811
BstYI RGATCY 1 cut(s) 811
BstZ17I GTATAC 1 cut(s) 1001
BsuRI GGCC 2 cut(s) 535, 652
BtrI CACGTC 1 cut(s) 406
BtsCI GGATG 9 cut(s) 24, 602, 788, 1462, 1751, 1817, 2058, 2101, 2105
Cac8I GCNNGC 2 cut(s) 820, 1446
CciI TCATGA 1 cut(s) 1623
CfoI GCGC 1 cut(s) 1911
Cfr13I GGNCC 4 cut(s) 175, 661, 1273, 1282
Csp6I GTAC 6 cut(s) 923, 1298, 1502, 1931, 1950, 2087
CspCI CAANNNNNGTGG 2 cut(s) 1676, 1711
CviQI GTAC 6 cut(s) 923, 1298, 1502, 1931, 1950, 2087
DdeI CTNAG 5 cut(s) 1135, 1214, 1469, 1634, 1934
DinI GGCGCC 1 cut(s) 1910
DraI TTTAAA 1 cut(s) 231
Eam1104I CTCTTC 2 cut(s) 1240, 1849
EarI CTCTTC 2 cut(s) 1240, 1849
Eco130I CCWWGG 1 cut(s) 1974
Eco147I AGGCCT 1 cut(s) 652
Eco47I GGWCC 4 cut(s) 175, 661, 1273, 1282
Eco57I CTGAAG 1 cut(s) 403
Eco72I CACGTG 1 cut(s) 706
EcoO109I RGGNCCY 1 cut(s) 175
EcoRII CCWGG 2 cut(s) 1324, 1455
EcoT14I CCWWGG 1 cut(s) 1974
EcoT22I ATGCAT 3 cut(s) 1992, 2044, 2085
EgeI GGCGCC 1 cut(s) 1910
EheI GGCGCC 1 cut(s) 1910
ErhI CCWWGG 1 cut(s) 1974
Esp3I CGTCTC 1 cut(s) 492
FaqI GGGAC 3 cut(s) 552, 685, 1224
FauI CCCGC 1 cut(s) 443
FauNDI CATATG 2 cut(s) 55, 1278
FblI GTMKAC 2 cut(s) 693, 1000
Fnu4HI GCNGC 1 cut(s) 141
FokI GGATG 9 cut(s) 11, 589, 795, 1449, 1758, 1824, 2065, 2108, 2112
Fsp4HI GCNGC 1 cut(s) 141
GlaI GCGC 1 cut(s) 1910
GluI GCNGC 1 cut(s) 141
GsuI CTGGAG 1 cut(s) 1044
HaeII RGCGCY 1 cut(s) 1912
HaeIII GGCC 2 cut(s) 535, 652
HapII CCGG 3 cut(s) 536, 767, 1672
HhaI GCGC 1 cut(s) 1911
Hin1I GRCGYC 1 cut(s) 1909
Hin6I GCGC 1 cut(s) 1909
HinP1I GCGC 1 cut(s) 1909
HincII GTYRAC 1 cut(s) 694
HindII GTYRAC 1 cut(s) 694
HindIII AAGCTT 1 cut(s) 1075
HpaII CCGG 3 cut(s) 536, 767, 1672
HphI GGTGA 3 cut(s) 787, 1628, 1810
Hpy166II GTNNAC 8 cut(s) 447, 694, 1001, 1057, 1273, 1393, 1504, 1952
Hpy188I TCNGA 7 cut(s) 29, 373, 422, 497, 589, 661, 1492
Hpy8I GTNNAC 8 cut(s) 447, 694, 1001, 1057, 1273, 1393, 1504, 1952
Hpy99I CGWCG 3 cut(s) 38, 407, 1517
HpyAV CCTTC 5 cut(s) 166, 772, 784, 1076, 1704
HpyCH4III ACNGT 3 cut(s) 1804, 2026, 2091
HpyCH4IV ACGT 5 cut(s) 405, 443, 491, 705, 1894
HpyF10VI GCNNNNNNNGC 6 cut(s) 338, 423, 541, 806, 815, 2140
HpyF3I CTNAG 5 cut(s) 1135, 1214, 1469, 1634, 1934
HpySE526I ACGT 5 cut(s) 405, 443, 491, 705, 1894
Hsp92I GRCGYC 1 cut(s) 1909
HspAI GCGC 1 cut(s) 1909
KasI GGCGCC 1 cut(s) 1908
LmnI GCTCC 1 cut(s) 1025
Lsp1109I GCAGC 1 cut(s) 152
LweI GCATC 6 cut(s) 298, 341, 608, 1802, 1999, 2043
MaeII ACGT 5 cut(s) 405, 443, 491, 705, 1894
MaeIII GTNAC 8 cut(s) 346, 561, 972, 1381, 1475, 1798, 1844, 2252
MboII GAAGA 9 cut(s) 5, 8, 440, 602, 673, 1045, 1257, 1539, 1866
MfeI CAATTG 1 cut(s) 1761
MflI RGATCY 1 cut(s) 811
MhlI GDGCHC 1 cut(s) 1395
Mly113I GGCGCC 1 cut(s) 1909
MlyI GAGTC 5 cut(s) 121, 863, 948, 1430, 1892
MmeI TCCRAC 2 cut(s) 1381, 2073
Mph1103I ATGCAT 3 cut(s) 1992, 2044, 2085
MseI TTAA 7 cut(s) 47, 197, 230, 879, 899, 2126, 2222
MslI CAYNNNNRTG 1 cut(s) 607
MspA1I CMGCKG 1 cut(s) 559
MspCI CTTAAG 1 cut(s) 2221
MspI CCGG 3 cut(s) 536, 767, 1672
MspR9I CCNGG 4 cut(s) 537, 1326, 1457, 1673
MunI CAATTG 1 cut(s) 1761
MvaI CCWGG 2 cut(s) 1326, 1457
MwoI GCNNNNNNNGC 6 cut(s) 338, 423, 541, 806, 815, 2140
NarI GGCGCC 1 cut(s) 1909
NciI CCSGG 2 cut(s) 537, 1673
NdeI CATATG 2 cut(s) 55, 1278
NlaIV GGNNCC 4 cut(s) 177, 364, 614, 1910
NmuCI GTSAC 4 cut(s) 346, 561, 1798, 1844
NsiI ATGCAT 3 cut(s) 1992, 2044, 2085
NspI RCATGY 5 cut(s) 1021, 1055, 1448, 1794, 2087
NspV TTCGAA 1 cut(s) 1926
PaeI GCATGC 1 cut(s) 1448
PagI TCATGA 1 cut(s) 1623
PceI AGGCCT 1 cut(s) 652
PciI ACATGT 1 cut(s) 1051
PfeI GAWTC 6 cut(s) 30, 374, 944, 1874, 1919, 2159
PflMI CCANNNNNTGG 2 cut(s) 157, 213
PfoI TCCNGGA 1 cut(s) 1324
PkrI GCNGC 1 cut(s) 142
Ple19I CGATCG 1 cut(s) 40
PleI GAGTC 5 cut(s) 121, 862, 947, 1429, 1891
PluTI GGCGCC 1 cut(s) 1912
PmaCI CACGTG 1 cut(s) 706
PmlI CACGTG 1 cut(s) 706
PpsI GAGTC 5 cut(s) 121, 862, 947, 1429, 1891
Ppu21I YACGTR 1 cut(s) 706
PpuMI RGGWCCY 1 cut(s) 175
PscI ACATGT 1 cut(s) 1051
PsiI TTATAA 1 cut(s) 1343
Psp5II RGGWCCY 1 cut(s) 175
Psp6I CCWGG 2 cut(s) 1324, 1455
PspCI CACGTG 1 cut(s) 706
PspGI CCWGG 2 cut(s) 1324, 1455
PspN4I GGNNCC 4 cut(s) 177, 364, 614, 1910
PspPI GGNCC 4 cut(s) 175, 661, 1273, 1282
PspPPI RGGWCCY 1 cut(s) 175
PstI CTGCAG 1 cut(s) 546
PsuI RGATCY 1 cut(s) 811
PvuI CGATCG 1 cut(s) 40
PvuII CAGCTG 1 cut(s) 559
RsaI GTAC 6 cut(s) 924, 1299, 1503, 1932, 1951, 2088
RsaNI GTAC 6 cut(s) 923, 1298, 1502, 1931, 1950, 2087
RseI CAYNNNNRTG 1 cut(s) 607
SalI GTCGAC 1 cut(s) 692
SaqAI TTAA 7 cut(s) 47, 197, 230, 879, 899, 2126, 2222
SatI GCNGC 1 cut(s) 141
Sau96I GGNCC 4 cut(s) 175, 661, 1273, 1282
ScaI AGTACT 2 cut(s) 1299, 1932
SchI GAGTC 5 cut(s) 121, 863, 948, 1430, 1892
ScrFI CCNGG 4 cut(s) 537, 1326, 1457, 1673
SduI GDGCHC 1 cut(s) 1395
SfaNI GCATC 6 cut(s) 298, 341, 608, 1802, 1999, 2043
SfcI CTRYAG 2 cut(s) 103, 542
SfoI GGCGCC 1 cut(s) 1910
SfuI TTCGAA 1 cut(s) 1926
SinI GGWCC 4 cut(s) 175, 661, 1273, 1282
SmiMI CAYNNNNRTG 1 cut(s) 607
SmlI CTYRAG 5 cut(s) 357, 412, 512, 948, 2221
SmoI CTYRAG 5 cut(s) 357, 412, 512, 948, 2221
SpeI ACTAGT 1 cut(s) 1003
SphI GCATGC 1 cut(s) 1448
SseBI AGGCCT 1 cut(s) 652
SsiI CCGC 2 cut(s) 330, 436
SspDI GGCGCC 1 cut(s) 1908
SspI AATATT 1 cut(s) 1487
StuI AGGCCT 1 cut(s) 652
StyD4I CCNGG 4 cut(s) 535, 1324, 1455, 1671
StyI CCWWGG 1 cut(s) 1974
TaaI ACNGT 3 cut(s) 1804, 2026, 2091
TaiI ACGT 5 cut(s) 408, 446, 494, 708, 1897
TaqI TCGA 7 cut(s) 33, 40, 693, 942, 1123, 1740, 1926
TatI WGTACW 3 cut(s) 1297, 1501, 1930
TfiI GAWTC 6 cut(s) 30, 374, 944, 1874, 1919, 2159
Tru1I TTAA 7 cut(s) 47, 197, 230, 879, 899, 2126, 2222
Tru9I TTAA 7 cut(s) 47, 197, 230, 879, 899, 2126, 2222
TseFI GTSAC 4 cut(s) 346, 561, 1798, 1844
TseI GCWGC 1 cut(s) 140
Tsp45I GTSAC 4 cut(s) 346, 561, 1798, 1844
TspDTI ATGAA 8 cut(s) 13, 244, 252, 522, 1084, 1322, 1640, 2262
TspGWI ACGGA 2 cut(s) 1530, 1832
Van91I CCANNNNNTGG 2 cut(s) 157, 213
Vha464I CTTAAG 1 cut(s) 2221
VneI GTGCAC 1 cut(s) 1391
VpaK11BI GGWCC 4 cut(s) 175, 661, 1273, 1282
XapI RAATTY 2 cut(s) 383, 2147
XbaI TCTAGA 1 cut(s) 1241
XceI RCATGY 5 cut(s) 1021, 1055, 1448, 1794, 2087
XmiI GTMKAC 2 cut(s) 693, 1000
ZrmI AGTACT 2 cut(s) 1299, 1932
Zsp2I ATGCAT 3 cut(s) 1992, 2044, 2085
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.