Rmu_sc0001992.1_g000031

TMV resistance protein N-like

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001992.1
Physical Location & Seq
Forward (+)
151688 .. 155946
4259 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001992.1_g000031.1.cds

Sequence Viewer

Length: 3153 bp
atggctcttgtaagatcagctcatccagaaccctcctctttcccaaatgcttctccttcaatatctagtcatgatgtgttcttgagtttccgaggtgaagacactcggaagactttcactgaccacctctatacagccttaatgaatgcaggctttcgtacgtttcgagatgacgatgatcttcaaagaggaaaaaaaattaagccggaactggagaaagccatcgagcagtcccgaagttctgtgattgtgttctccaaagactatgcatcgtctggttggtgccttgacgagcttttgatgatcatgaaacggaggaggacagctgatcacatagttttacccgtcttctatgatgtcgatccatcccatgtgaggaagcaaacaggaaaagctgcagatctatcaggaatggtcttgcaaaatgaagctgacgggcatgagtcaaagttcataaagaaagttgtcaaagtaattgaagatagactgaggcgcacgcccttaagtgttgacagacacttggttggaatcgattctcaagttgaagggatcaacttgtggttagaagatgaatcaactgatattttcgtacttctagtctatggaatgcgaggaattggaaagtcgaccatagcaaaatatgtttataatctgaactgtcacagatttgagagatgcagtttccttgaagatatcagagaattttccaaacgatctaatggcttggttgatttgcagaagcaacttctttatgatattctgagaggaaagaatgtcaaaatacagggactggtagaagctcatcgacaatttgttaaggtgcatgaagttaaaactttgggggacaatgattctttggaactctttagtcggcatgcttttggacggacccatcccattgaaagttacgtggatctttccgtaagggtagttgatcactgtgggggacttccactggctctgaaagttttaggttcttctttatcagggaagaatttagctttttggggaagttatttaaataaattggaagtaattccaaatgatgatatcttgaagaaactcaaaatcagctacgaatccttacaagatgatcatgacagaaacttattccttgatattgcatgttttttcatcggaatggagaaaaatttgattgttacaattttagatgactatgatatcttcccggaagttggcattcaaaatctcatcgatagatgtttggtaacaattgaatacaacaaggtgcaaatgcataatttgattcgtgacatgggaagaggaattgttcatcgagaatcaaaggagccaagaaaccgcagtagattatggcatcacaatgattctatcgaaggtaccgaagcaattgaaggtattgttgtcaatatgcaactgcaccctacatatacttccccttcaagaaatgcaagtaaggtagtcatggaaaccaatgcatttacaaggatgcacaatctaagattcctccagcttagtcatatacaactcagtggatgctatgaagaatttcctgcaggattaagatggctgtgctggattaaatatcctttagcttctttacccaatgaattcccattagagagcgttgttgctcttgaaatgtgttacagtaatttgagacaagtttggaggggaacaaagtatatcccttcgctaaagatcctgaatctcagccactctcatgacttaacagaaacccctgacttttcgtctattcctaatcttgagagattgaatcttagagactgtgtaagcttgattgatgtccatgagtctattggaagcctagagagacttgtttatttgaatgtagaagattgcataagtatttggaagcttcccaagaacatttctttgctactggaagtacttatcatttctggttgttcaagtcttgatgagtttccagtggacatgaggaagatggaatctctcaaagtatttcaggcagatggacttccaaggaatctagtaaagttgagtctaagaaactgcaatctttcggatgatgactttcctagagatgttgctaatttattgtcattgcgaaaattggatctcagcgggaaccctatttctaggctaccggattgcataagaggtgttactggcctccgatacctctgtttgacgtattgtacaaagctcaaatcacttctaaggctaccatcagaatcacttcatcaattctctgtggaggggtgcacatcattggaaaaagtaacatttcaatcttttcgaacttcttctagttgggggtccaaccatagccttgttgagttgcagggtatgttcaagatggaacccattgaaagagttgataaagaaatgctaaaacttttgagtctaggcaacctggaaaccttggaaaacatttcgatggtcaatagtggattatattctcaatgcatatggaagggaacagatcccgtccagggactgtacgaagatggtatattcagcacattccttcctggagacgaagttccaggccagttcagccatagaagcagagggtcctctgtatcctttactgtgcctttacttcccaatctcaatatacgagggctgaatgtcttctcggtcatagcacaatccaacaacaatgattctgatcctatgaccaatagtgtctatattgacggtttaggttttccgacaattaccgttgtgattaataagagcaaggggctgaagtggatccatggtccaaacttctctggcgttccgggtgaaggaaaagatgtgatatggttaagtcactggaagtttgggaatctgcttacatgtggtgatgaggtgactattttaatatatacgaaatctgatttcaaggtaaaggagtgtggcatccagcttgtttactaccatgagaaagatcatgtggcttcgaccacggacgatctttgttttctccgagctggagttcgggatatcaatgaaaaatcagagaaagaagaagggcaagagggtgacctcgtccttactcttgcagcacaaagtagcagcaatagcaataaacgaggtttgatcagcagaggttggaaggggatcatgatggccaccatcctcattctttctcttcctctggttactcgctctcctctcttccaccagcgaaagaaacaatag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1050

Amino Acids

118.98

Weight (kDa)

6.63

Isoelectric Point (pI)

43.38

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000036)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G57630 AT1G72930 AT5G38344
fragaria_vesca FvH4_1g27020 FvH4_2g00931 FvH4_2g17330 FvH4_2g17330 FvH4_2g17340 FvH4_2g17350 FvH4_2g20690 FvH4_5g15301 FvH4_5g34194 FvH4_5g38530 FvH4_5g38740 FvH4_5g38740 FvH4_5g38740 FvH4_6g03800 FvH4_7g09791 FvH4_7g09800 FvH4_7g09800 FvH4_7g10510 FvH4_7g10520 FvH4_7g10520 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750
malus_domestica MD02G1217100.v1.1 MD02G1217200.v1.1 MD02G1217400.v1.1 MD02G1217600.v1.1 MD02G1264800.v1.1 MD02G1264900.v1.1 MD02G1302100.v1.1 MD04G1010700.v1.1 MD05G1006800.v1.1 MD05G1140100.v1.1 MD05G1140200.v1.1 MD05G1152200.v1.1 MD07G1073500.v1.1 MD07G1101700.v1.1 MD07G1102200.v1.1 MD07G1103200.v1.1 MD07G1112300.v1.1 MD08G1018200.v1.1 MD08G1018400.v1.1 MD08G1018800.v1.1 MD08G1019000.v1.1 MD08G1019100.v1.1 MD08G1019200.v1.1 MD08G1019300.v1.1 MD08G1019400.v1.1 MD08G1019600.v1.1 MD08G1019900.v1.1 MD08G1020000.v1.1 MD08G1020200.v1.1 MD08G1020500.v1.1 MD08G1020700.v1.1 MD08G1020800.v1.1 MD08G1040700.v1.1 MD11G1112400.v1.1 MD12G1068600.v1.1 MD12G1193200.v1.1 MD13G1050600.v1.1 MD15G1374900.v1.1 MD15G1375100.v1.1 MD15G1416500.v1.1 MD17G1072500.v1.1 MD17G1274200.v1.1 MD17G1274900.v1.1
prunus_persica Prupe.2G121000_v2.0.a1 Prupe.2G121000_v2.0.a1 Prupe.2G125800_v2.0.a1 Prupe.2G126000_v2.0.a1 Prupe.2G126100_v2.0.a1 Prupe.2G126200_v2.0.a1 Prupe.2G126300_v2.0.a1 Prupe.2G126400_v2.0.a1 Prupe.2G126500_v2.0.a1 Prupe.2G126600_v2.0.a1 Prupe.2G126700_v2.0.a1 Prupe.2G126700_v2.0.a1 Prupe.2G126800_v2.0.a1 Prupe.2G126900_v2.0.a1 Prupe.2G127000_v2.0.a1 Prupe.2G127000_v2.0.a1 Prupe.2G127000_v2.0.a1 Prupe.2G127000_v2.0.a1 Prupe.2G135500_v2.0.a1 Prupe.2G135600_v2.0.a1 Prupe.2G135700_v2.0.a1 Prupe.2G135700_v2.0.a1 Prupe.3G009800_v2.0.a1 Prupe.3G010200_v2.0.a1 Prupe.3G131000_v2.0.a1 Prupe.4G260800_v2.0.a1 Prupe.4G260900_v2.0.a1 Prupe.6G083100_v2.0.a1 Prupe.6G083200_v2.0.a1 Prupe.6G083400_v2.0.a1 Prupe.6G132100_v2.0.a1 Prupe.8G184900_v2.0.a1 Prupe.8G185200_v2.0.a1 Prupe.8G185300_v2.0.a1
pyrus_communis pycom02g17870 pycom02g17880 pycom02g19520 pycom02g22610 pycom02g22630 pycom02g22680 pycom05g13540 pycom05g14680 pycom07g04880 pycom07g04890 pycom07g05690 pycom07g05710 pycom07g05720 pycom07g05750 pycom07g05780 pycom07g06300 pycom07g08320 pycom07g08330 pycom07g08350 pycom07g08360 pycom07g08370 pycom07g08410 pycom07g08420 pycom07g08430 pycom07g08440 pycom07g08470 pycom07g08480 pycom07g08520 pycom07g08550 pycom07g08560 pycom07g08640 pycom07g08660 pycom07g08670 pycom07g08680 pycom07g08690 pycom07g08720 pycom07g08730 pycom07g08790 pycom07g08800 pycom07g08810 pycom07g08860 pycom07g08890 pycom07g09720 pycom08g01590 pycom08g01600 pycom08g01620 pycom08g01630 pycom08g01640 pycom10g12630 pycom15g16490 pycom17g07200 pycom17g07210 pycom17g07220 pycom17g11730 pycom17g11740 pycom17g27340 pycom17g27380
rosa_chinensis RchiOBHm_Chr1g0342571 RchiOBHm_Chr1g0346231 RchiOBHm_Chr1g0346831 RchiOBHm_Chr1g0346891 RchiOBHm_Chr1g0348311 RchiOBHm_Chr1g0348321 RchiOBHm_Chr1g0348331 RchiOBHm_Chr1g0348361 RchiOBHm_Chr1g0348371 RchiOBHm_Chr1g0348381 RchiOBHm_Chr1g0348401 RchiOBHm_Chr1g0348411 RchiOBHm_Chr1g0348421 RchiOBHm_Chr1g0348431 RchiOBHm_Chr2g0130881 RchiOBHm_Chr3g0487331 RchiOBHm_Chr5g0060371 RchiOBHm_Chr6g0246491 RchiOBHm_Chr6g0246871 RchiOBHm_Chr6g0250311 RchiOBHm_Chr6g0250781 RchiOBHm_Chr6g0251431 RchiOBHm_Chr6g0281871 RchiOBHm_Chr6g0281881 RchiOBHm_Chr6g0281931 RchiOBHm_Chr6g0281941 RchiOBHm_Chr6g0281951 RchiOBHm_Chr6g0281971 RchiOBHm_Chr6g0281981 RchiOBHm_Chr7g0240541 RchiOBHm_Chr7g0240631 RchiOBHm_Chr7g0240671
rosa_laevigata RLG00000000627 RLG00000000631 RLG00000000641 RLG00000000645 RLG00000000652 RLG00000000662 RLG00000000663 RLG00000000667 RLG00000000670 RLG00000000702 RLG00000001216 RLG00000001219 RLG00000007678 RLG00000012923 RLG00000012996 RLG00000013243 RLG00000017513 RLG00000017514 RLG00000020936 RLG00000022755 RLG00000023013 RLG00000028646 RLG00000028654 RLG00000028662 RLG00000028665 RLG00000028667 RLG00000028711 RLG00000028714 RLG00000028716 RLG00000028770 RLG00000028771 RLG00000028773 RLG00000028778 RLG00000028798 RLG00000028809 RLG00000028813 RLG00000029334 RLG00000030003 RLG00000033910 RLG00000034358 RLG00000035430
rosa_multiflora Rmu_co8031134.1_g000001 Rmu_co8092796.1_g000001 Rmu_co8130156.1_g000001 Rmu_co8325323.1_g000001 Rmu_co8424083.1_g000002 Rmu_sc0000008.1_g000003 Rmu_sc0000008.1_g000011 Rmu_sc0000008.1_g000015 Rmu_sc0000008.1_g000020 Rmu_sc0000091.1_g000015 Rmu_sc0000091.1_g000018 Rmu_sc0000091.1_g000029 Rmu_sc0000091.1_g000031 Rmu_sc0000391.1_g000004 Rmu_sc0001070.1_g000030 Rmu_sc0001293.1_g000016 Rmu_sc0001674.1_g000006 Rmu_sc0001731.1_g000002 Rmu_sc0001731.1_g000003 Rmu_sc0001731.1_g000005 Rmu_sc0001911.1_g000029 Rmu_sc0001913.1_g000038 Rmu_sc0001955.1_g000025 Rmu_sc0001992.1_g000022 Rmu_sc0001992.1_g000028 Rmu_sc0001992.1_g000031 Rmu_sc0002517.1_g000013 Rmu_sc0002517.1_g000017 Rmu_sc0002551.1_g000022 Rmu_sc0002551.1_g000029 Rmu_sc0002551.1_g000038 Rmu_sc0002705.1_g000015 Rmu_sc0002705.1_g000016 Rmu_sc0002882.1_g000055 Rmu_sc0003232.1_g000027 Rmu_sc0003363.1_g000037 Rmu_sc0003600.1_g000054 Rmu_sc0003918.1_g000011 Rmu_sc0004395.1_g000011 Rmu_sc0005071.1_g000004 Rmu_sc0005255.1_g000018 Rmu_sc0005327.1_g000004 Rmu_sc0005597.1_g000007 Rmu_sc0007060.1_g000007 Rmu_sc0007310.1_g000003 Rmu_sc0007383.1_g000014 Rmu_sc0007799.1_g000003 Rmu_sc0008477.1_g000016 Rmu_sc0010151.1_g000009 Rmu_sc0011217.1_g000005 Rmu_sc0016269.1_g000006 Rmu_sc0021495.1_g000001 Rmu_sc0027364.1_g000001 Rmu_sc0029432.1_g000001 Rmu_sc0041386.1_g000001 Rmu_ssc0000126.1_g000023 Rmu_ssc0000126.1_g000027
rosa_roxburghii Rroxscaffold_1G00006130 Rroxscaffold_1G00023320 Rroxscaffold_1G00038770 Rroxscaffold_2G00119800 Rroxscaffold_2G00121860 Rroxscaffold_3G00219780 Rroxscaffold_3G00219890 Rroxscaffold_4G00306740 Rroxscaffold_4G00306820 Rroxscaffold_4G00307000 Rroxscaffold_4G00307010 Rroxscaffold_4G00307020 Rroxscaffold_4G00308030 Rroxscaffold_4G00308070 Rroxscaffold_4G00308450 Rroxscaffold_4G00308460 Rroxscaffold_4G00315320 Rroxscaffold_5G00352470 Rroxscaffold_5G00371420 Rroxscaffold_6G00392300 Rroxscaffold_6G00394870 Rroxscaffold_6G00394890 Rroxscaffold_7G00186700 Rroxscaffold_7G00194980 Rroxscaffold_7G00216840
rosa_rugosa Rorug01G0076100 Rorug01G0128100 Rorug01G0149000.1 Rorug01G0149500.1 Rorug01G0180000 Rorug01G0180100 Rorug01G0182900 Rorug01G0184000 Rorug01G0184100 Rorug01G0184300 Rorug01G0184600 Rorug01G0184700 Rorug01G0184700 Rorug01G0184900 Rorug01G0185000 Rorug01G0185100 Rorug01G0189300 Rorug01G0194100 Rorug01G0194100 Rorug01G0194200 Rorug01G0194400 Rorug01G0194400 Rorug01G0194500 Rorug02G0090400 Rorug02G0090400 Rorug03G0233000 Rorug03G0233100 Rorug05G0178600 Rorug05G0178700 Rorug05G0579200 Rorug06G0144100 Rorug06G0144300 Rorug06G0144300 Rorug06G0179300 Rorug06G0208800 Rorug07G0323500 Rorug07G0337000
rosa_samantha Rh1AG046100 Rh1AG201400 Rh1AG201800 Rh1AG202100 Rh1AG202600 Rh1AG211500 Rh1AG211800 Rh1AG212200 Rh1AG212500 Rh1AG212600 Rh1AG214200 Rh1BG168000 Rh1BG168300 Rh1BG168500 Rh1BG177900 Rh1BG178200 Rh1BG178300 Rh1BG178800 Rh1BG178900 Rh1CG080900 Rh1CG183300 Rh1CG186300 Rh1CG186700 Rh1CG187000 Rh1CG187300 Rh1CG193400 Rh1CG195800 Rh1CG196000 Rh1CG196100 Rh1CG196400 Rh1CG196500 Rh1CG196800 Rh1CG198800 Rh1CG442600 Rh1DG086200 Rh1DG155400 Rh1DG156200 Rh1DG194000 Rh1DG194300 Rh1DG194900 Rh1DG197000 Rh1DG198800 Rh1DG199000 Rh1DG199200 Rh1DG202000 Rh1DG203900 Rh1DG207600 Rh1DG207900 Rh1DG208000 Rh1DG208500 Rh1DG208600 Rh1DG208700 Rh3CG339100 Rh5AG106500 Rh5AG264800 Rh5AG265300 Rh5CG302800 Rh5DG277900 Rh6AG257600 Rh6AG257700 Rh6BG260500 Rh6BG260700 Rh6CG259600 Rh6CG259700 Rh6DG252100 Rh7DG126900
rosa_wichuraiana Rw0G005780 Rw0G007540 Rw0G007550 Rw0G007560 Rw0G009390 Rw1G016900 Rw1G016930 Rw1G016940 Rw1G016970 Rw1G017860 Rw1G017890 Rw1G017900 Rw1G017910 Rw1G017920 Rw1G017960 Rw1G017970 Rw1G017980 Rw1G018150 Rw4G000830 Rw5G009290 Rw5G018950 Rw5G024850 Rw5G024870 Rw5G040460 Rw6G022290 Rw7G041020 Rw7G041200 Rw7G041360 Rw7G041450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 648
Acc65I GGTACC 1 cut(s) 1358
AccB1I GGYRCC 2 cut(s) 282, 1358
AccI GTMKAC 1 cut(s) 626
AciI CCGC 2 cut(s) 1321, 2085
AcoI YGGCCR 1 cut(s) 3081
AcsI RAATTY 5 cut(s) 701, 994, 1150, 1526, 1589
AcuI CTGAAG 1 cut(s) 2735
AfaI GTAC 6 cut(s) 160, 591, 1360, 1890, 2161, 2465
AfiI CCNNNNNNNGG 4 cut(s) 375, 1196, 2456, 2756
AflII CTTAAG 1 cut(s) 502
AflIII ACRYGT 1 cut(s) 2807
AhdI GACNNNNNGTC 1 cut(s) 1729
AjnI CCWGG 4 cut(s) 2376, 2454, 2494, 2509
AloI GAACNNNNNNTCC 2 cut(s) 2490, 2522
Alw21I GWGCWC 1 cut(s) 2228
Alw26I GTCTC 4 cut(s) 1633, 1758, 1807, 2493
Alw44I GTGCAC 1 cut(s) 2224
AlwNI CAGNNNCTG 2 cut(s) 790, 2461
AoxI GGCC 3 cut(s) 2131, 2512, 3081
ApaLI GTGCAC 1 cut(s) 2224
ApeKI GCWGC 3 cut(s) 395, 3014, 3027
ApoI RAATTY 5 cut(s) 701, 994, 1150, 1526, 1589
AseI ATTAAT 1 cut(s) 2697
Asp700I GAANNNNTTC 7 cut(s) 113, 532, 1035, 1527, 2199, 2266, 2597
Asp718I GGTACC 1 cut(s) 1358
AspLEI GCGC 1 cut(s) 495
AspS9I GGNCC 4 cut(s) 888, 2280, 2538, 2729
AsuC2I CCSGG 2 cut(s) 1190, 2751
AsuHPI GGTGA 5 cut(s) 107, 2765, 2825, 2833, 3005
AsuII TTCGAA 1 cut(s) 2260
AvaII GGWCC 4 cut(s) 888, 2280, 2538, 2729
BaeGI GKGCMC 1 cut(s) 2228
BaeI ACNNNNGTAYC 2 cut(s) 2131, 2164
BalI TGGCCA 1 cut(s) 3083
BamHI GGATCC 1 cut(s) 2721
BanI GGYRCC 2 cut(s) 282, 1358
BbsI GAAGAC 4 cut(s) 105, 116, 340, 2590
Bbv12I GWGCWC 1 cut(s) 2228
BbvI GCAGC 3 cut(s) 382, 3026, 3039
BciT130I CCWGG 4 cut(s) 2378, 2456, 2496, 2511
BciVI GTATCC 1 cut(s) 2557
BclI TGATCA 5 cut(s) 303, 328, 934, 1093, 3051
BcnI CCSGG 2 cut(s) 1190, 2751
BcoDI GTCTC 4 cut(s) 1633, 1758, 1807, 2493
BfaI CTAG 8 cut(s) 66, 596, 1808, 1991, 2040, 2100, 2271, 2369
BfmI CTRYAG 2 cut(s) 396, 1533
BfrI CTTAAG 1 cut(s) 502
BfuI GTATCC 1 cut(s) 2557
BglII AGATCT 1 cut(s) 400
BisI GCNGC 3 cut(s) 396, 3015, 3028
BlsI GCNGC 3 cut(s) 397, 3016, 3029
BmcAI AGTACT 1 cut(s) 1890
Bme1390I CCNGG 6 cut(s) 1190, 2378, 2456, 2496, 2511, 2751
Bme18I GGWCC 4 cut(s) 888, 2280, 2538, 2729
BmeRI GACNNNNNGTC 1 cut(s) 1729
BmgT120I GGNCC 4 cut(s) 888, 2280, 2538, 2729
BmiI GGNNCC 9 cut(s) 284, 890, 1311, 1360, 2090, 2281, 2325, 2539, 2723
BmrFI CCNGG 6 cut(s) 1190, 2378, 2456, 2496, 2511, 2751
BmsI GCATC 6 cut(s) 278, 665, 1345, 1458, 1505, 2880
BpiI GAAGAC 4 cut(s) 105, 116, 340, 2590
BpmI CTGGAG 4 cut(s) 233, 1472, 2517, 2964
Bpu14I TTCGAA 1 cut(s) 2260
BpuEI CTTGAG 3 cut(s) 103, 522, 1766
BpuMI CCSGG 2 cut(s) 1190, 2751
Bsa29I ATCGAT 2 cut(s) 531, 1215
BsaAI YACGTR 1 cut(s) 910
BsaBI GATNNNNATC 2 cut(s) 360, 2634
BsaJI CCNNGG 6 cut(s) 91, 1982, 2385, 2455, 2725, 2916
BsaWI WCCGGW 1 cut(s) 2107
BsaXI ACNNNNNCTCC 4 cut(s) 2490, 2520, 3106, 3136
Bsc4I CCNNNNNNNGG 4 cut(s) 375, 1196, 2456, 2756
Bse1I ACTGG 8 cut(s) 216, 795, 960, 1887, 1928, 2134, 2515, 2789
Bse3DI GCAATG 1 cut(s) 2063
Bse8I GATNNNNATC 2 cut(s) 360, 2634
BseBI CCWGG 4 cut(s) 2378, 2456, 2496, 2511
BseCI ATCGAT 2 cut(s) 531, 1215
BseDI CCNNGG 6 cut(s) 91, 1982, 2385, 2455, 2725, 2916
BseGI GGATG 8 cut(s) 22, 365, 892, 1473, 1520, 2032, 2871, 3087
BseJI GATNNNNATC 2 cut(s) 360, 2634
BseLI CCNNNNNNNGG 4 cut(s) 375, 1196, 2456, 2756
BseMI GCAATG 1 cut(s) 2063
BseMII CTCAG 5 cut(s) 479, 752, 1522, 1705, 2095
BseNI ACTGG 8 cut(s) 216, 795, 960, 1887, 1928, 2134, 2515, 2789
BseRI GAGGAG 3 cut(s) 25, 331, 3114
BseSI GKGCMC 1 cut(s) 2228
BseXI GCAGC 3 cut(s) 382, 3026, 3039
BsgI GTGCAG 1 cut(s) 1382
BshFI GGCC 3 cut(s) 2133, 2514, 3083
BshNI GGYRCC 2 cut(s) 282, 1358
BshVI ATCGAT 2 cut(s) 531, 1215
BsiHKAI GWGCWC 1 cut(s) 2228
BsiSI CCGG 4 cut(s) 206, 1190, 2108, 2750
BsiWI CGTACG 1 cut(s) 158
BslFI GGGAC 5 cut(s) 217, 801, 857, 960, 2472
BslI CCNNNNNNNGG 4 cut(s) 375, 1196, 2456, 2756
BsmAI GTCTC 4 cut(s) 1633, 1758, 1807, 2493
BsmBI CGTCTC 1 cut(s) 2493
BsmFI GGGAC 5 cut(s) 217, 801, 857, 960, 2472
BsmI GAATGC 3 cut(s) 151, 612, 1200
BsnI GGCC 3 cut(s) 2133, 2514, 3083
Bsp119I TTCGAA 1 cut(s) 2260
Bsp1286I GDGCHC 1 cut(s) 2228
Bsp1407I TGTACA 1 cut(s) 2159
Bsp19I CCATGG 1 cut(s) 2725
BspACI CCGC 2 cut(s) 1321, 2085
BspANI GGCC 3 cut(s) 2133, 2514, 3083
BspCNI CTCAG 5 cut(s) 480, 753, 1521, 1704, 2094
BspDI ATCGAT 2 cut(s) 531, 1215
BspHI TCATGA 5 cut(s) 70, 306, 1096, 1702, 3075
BspLI GGNNCC 9 cut(s) 284, 890, 1311, 1360, 2090, 2281, 2325, 2539, 2723
BspMAI CTGCAG 2 cut(s) 400, 1537
BspT104I TTCGAA 1 cut(s) 2260
BspT107I GGYRCC 2 cut(s) 282, 1358
BspTI CTTAAG 1 cut(s) 502
BsrDI GCAATG 1 cut(s) 2063
BsrGI TGTACA 1 cut(s) 2159
BsrI ACTGG 8 cut(s) 216, 795, 960, 1887, 1928, 2134, 2515, 2789
BssECI CCNNGG 6 cut(s) 91, 1982, 2385, 2455, 2725, 2916
BssT1I CCWWGG 3 cut(s) 1982, 2385, 2725
Bst2UI CCWGG 4 cut(s) 2378, 2456, 2496, 2511
Bst4CI ACNGT 8 cut(s) 659, 941, 1631, 1769, 2463, 2557, 2666, 2689
Bst6I CTCTTC 3 cut(s) 1276, 3108, 3134
BstAFI CTTAAG 1 cut(s) 502
BstAUI TGTACA 1 cut(s) 2159
BstBAI YACGTR 1 cut(s) 910
BstBI TTCGAA 1 cut(s) 2260
BstC8I GCNNGC 3 cut(s) 151, 497, 876
BstDSI CCRYGG 2 cut(s) 2725, 2916
BstEII GGTNACC 1 cut(s) 2993
BstF5I GGATG 8 cut(s) 22, 365, 892, 1473, 1520, 2032, 2871, 3087
BstHHI GCGC 1 cut(s) 495
BstMAI GTCTC 4 cut(s) 1633, 1758, 1807, 2493
BstMWI GCNNNNNNNGC 3 cut(s) 2520, 2529, 3033
BstNI CCWGG 4 cut(s) 2378, 2456, 2496, 2511
BstNSI RCATGY 3 cut(s) 878, 1128, 2811
BstPI GGTNACC 1 cut(s) 2993
BstSCI CCNGG 6 cut(s) 1188, 2376, 2454, 2494, 2509, 2749
BstSFI CTRYAG 2 cut(s) 396, 1533
BstSLI GKGCMC 1 cut(s) 2228
BstV1I GCAGC 3 cut(s) 382, 3026, 3039
BstV2I GAAGAC 4 cut(s) 105, 116, 340, 2590
BstX2I RGATCY 6 cut(s) 400, 913, 1680, 2077, 2446, 2721
BstYI RGATCY 6 cut(s) 400, 913, 1680, 2077, 2446, 2721
Bsu15I ATCGAT 2 cut(s) 531, 1215
BsuI GTATCC 1 cut(s) 2557
BsuRI GGCC 3 cut(s) 2133, 2514, 3083
BsuTUI ATCGAT 2 cut(s) 531, 1215
BtgI CCRYGG 2 cut(s) 2725, 2916
BtsCI GGATG 8 cut(s) 22, 365, 892, 1473, 1520, 2032, 2871, 3087
BtsIMutI CAGTG 6 cut(s) 117, 937, 953, 1516, 1935, 2782
Cac8I GCNNGC 3 cut(s) 151, 497, 876
CaiI CAGNNNCTG 2 cut(s) 790, 2461
CciI TCATGA 5 cut(s) 70, 306, 1096, 1702, 3075
CfoI GCGC 1 cut(s) 495
Cfr13I GGNCC 4 cut(s) 888, 2280, 2538, 2729
ClaI ATCGAT 2 cut(s) 531, 1215
Csp6I GTAC 6 cut(s) 159, 590, 1359, 1889, 2160, 2464
CviQI GTAC 6 cut(s) 159, 590, 1359, 1889, 2160, 2464
DraI TTTAAA 1 cut(s) 1020
DriI GACNNNNNGTC 1 cut(s) 1729
EaeI YGGCCR 1 cut(s) 3081
Eam1104I CTCTTC 3 cut(s) 1276, 3108, 3134
Eam1105I GACNNNNNGTC 1 cut(s) 1729
EarI CTCTTC 3 cut(s) 1276, 3108, 3134
Eco130I CCWWGG 3 cut(s) 1982, 2385, 2725
Eco32I GATATC 4 cut(s) 694, 1051, 1183, 2956
Eco47I GGWCC 4 cut(s) 888, 2280, 2538, 2729
Eco57I CTGAAG 1 cut(s) 2735
Eco91I GGTNACC 1 cut(s) 2993
EcoO109I RGGNCCY 1 cut(s) 2538
EcoO65I GGTNACC 1 cut(s) 2993
EcoRI GAATTC 1 cut(s) 1589
EcoRII CCWGG 4 cut(s) 2376, 2454, 2494, 2509
EcoRV GATATC 4 cut(s) 694, 1051, 1183, 2956
EcoT14I CCWWGG 3 cut(s) 1982, 2385, 2725
EcoT22I ATGCAT 4 cut(s) 271, 1260, 1459, 2432
ErhI CCWWGG 3 cut(s) 1982, 2385, 2725
Esp3I CGTCTC 1 cut(s) 2493
FaqI GGGAC 5 cut(s) 217, 801, 857, 960, 2472
FauI CCCGC 1 cut(s) 2078
FauNDI CATATG 1 cut(s) 2432
FbaI TGATCA 5 cut(s) 303, 328, 934, 1093, 3051
FblI GTMKAC 1 cut(s) 626
Fnu4HI GCNGC 3 cut(s) 396, 3015, 3028
FokI GGATG 8 cut(s) 9, 352, 879, 1480, 1527, 2039, 2858, 3074
Fsp4HI GCNGC 3 cut(s) 396, 3015, 3028
FspBI CTAG 8 cut(s) 66, 596, 1808, 1991, 2040, 2100, 2271, 2369
GlaI GCGC 1 cut(s) 494
GluI GCNGC 3 cut(s) 396, 3015, 3028
GsuI CTGGAG 4 cut(s) 233, 1472, 2517, 2964
HaeIII GGCC 3 cut(s) 2133, 2514, 3083
HapII CCGG 4 cut(s) 206, 1190, 2108, 2750
HhaI GCGC 1 cut(s) 495
Hin6I GCGC 1 cut(s) 493
HinP1I GCGC 1 cut(s) 493
HincII GTYRAC 2 cut(s) 511, 627
HindII GTYRAC 2 cut(s) 511, 627
HindIII AAGCTT 2 cut(s) 1774, 1856
HpaII CCGG 4 cut(s) 206, 1190, 2108, 2750
HphI GGTGA 5 cut(s) 107, 2765, 2825, 2833, 3005
Hpy166II GTNNAC 5 cut(s) 511, 627, 1933, 2226, 2884
Hpy8I GTNNAC 5 cut(s) 511, 627, 1933, 2226, 2884
HpyCH4III ACNGT 8 cut(s) 659, 941, 1631, 1769, 2463, 2557, 2666, 2689
HpyCH4IV ACGT 3 cut(s) 161, 909, 2153
HpyF10VI GCNNNNNNNGC 3 cut(s) 2520, 2529, 3033
HpySE526I ACGT 3 cut(s) 161, 909, 2153
HspAI GCGC 1 cut(s) 493
KpnI GGTACC 1 cut(s) 1362
Ksp22I TGATCA 5 cut(s) 303, 328, 934, 1093, 3051
LmnI GCTCC 1 cut(s) 1309
Lsp1109I GCAGC 3 cut(s) 382, 3026, 3039
LweI GCATC 6 cut(s) 278, 665, 1345, 1458, 1505, 2880
MaeI CTAG 8 cut(s) 66, 596, 1808, 1991, 2040, 2100, 2271, 2369
MaeII ACGT 3 cut(s) 161, 909, 2153
MfeI CAATTG 2 cut(s) 1233, 1368
MflI RGATCY 6 cut(s) 400, 913, 1680, 2077, 2446, 2721
MhlI GDGCHC 1 cut(s) 2228
MlsI TGGCCA 1 cut(s) 3083
MluNI TGGCCA 1 cut(s) 3083
MlyI GAGTC 4 cut(s) 452, 1802, 2011, 2374
MmeI TCCRAC 5 cut(s) 505, 2307, 2643, 2702, 3044
Mox20I TGGCCA 1 cut(s) 3083
Mph1103I ATGCAT 4 cut(s) 271, 1260, 1459, 2432
MroXI GAANNNNTTC 7 cut(s) 113, 532, 1035, 1527, 2199, 2266, 2597
MscI TGGCCA 1 cut(s) 3083
MslI CAYNNNNRTG 4 cut(s) 1139, 1341, 1701, 2399
Msp20I TGGCCA 1 cut(s) 3083
MspA1I CMGCKG 2 cut(s) 326, 2085
MspCI CTTAAG 1 cut(s) 502
MspI CCGG 4 cut(s) 206, 1190, 2108, 2750
MspR9I CCNGG 6 cut(s) 1190, 2378, 2456, 2496, 2511, 2751
MunI CAATTG 2 cut(s) 1233, 1368
Mva1269I GAATGC 3 cut(s) 151, 612, 1200
MvaI CCWGG 4 cut(s) 2378, 2456, 2496, 2511
MwoI GCNNNNNNNGC 3 cut(s) 2520, 2529, 3033
NciI CCSGG 2 cut(s) 1190, 2751
NcoI CCATGG 1 cut(s) 2725
NdeI CATATG 1 cut(s) 2432
NlaIV GGNNCC 9 cut(s) 284, 890, 1311, 1360, 2090, 2281, 2325, 2539, 2723
NmuCI GTSAC 5 cut(s) 659, 1271, 2780, 2821, 2993
NsiI ATGCAT 4 cut(s) 271, 1260, 1459, 2432
NspI RCATGY 3 cut(s) 878, 1128, 2811
NspV TTCGAA 1 cut(s) 2260
PaeI GCATGC 1 cut(s) 878
PagI TCATGA 5 cut(s) 70, 306, 1096, 1702, 3075
PciI ACATGT 1 cut(s) 2807
PcsI WCGNNNNNNNCGW 2 cut(s) 163, 1359
PctI GAATGC 3 cut(s) 151, 612, 1200
PdmI GAANNNNTTC 7 cut(s) 113, 532, 1035, 1527, 2199, 2266, 2597
Pfl23II CGTACG 1 cut(s) 158
PflFI GACNNNGTC 1 cut(s) 2999
PfoI TCCNGGA 2 cut(s) 1188, 2494
PkrI GCNGC 3 cut(s) 397, 3016, 3029
PleI GAGTC 4 cut(s) 451, 1801, 2010, 2373
PpsI GAGTC 4 cut(s) 451, 1801, 2010, 2373
Ppu21I YACGTR 1 cut(s) 910
PpuMI RGGWCCY 1 cut(s) 2538
PscI ACATGT 1 cut(s) 2807
PshBI ATTAAT 1 cut(s) 2697
PsiI TTATAA 1 cut(s) 648
Psp5II RGGWCCY 1 cut(s) 2538
Psp6I CCWGG 4 cut(s) 2376, 2454, 2494, 2509
PspEI GGTNACC 1 cut(s) 2993
PspGI CCWGG 4 cut(s) 2376, 2454, 2494, 2509
PspLI CGTACG 1 cut(s) 158
PspN4I GGNNCC 9 cut(s) 284, 890, 1311, 1360, 2090, 2281, 2325, 2539, 2723
PspPI GGNCC 4 cut(s) 888, 2280, 2538, 2729
PspPPI RGGWCCY 1 cut(s) 2538
PstI CTGCAG 2 cut(s) 400, 1537
PstNI CAGNNNCTG 2 cut(s) 790, 2461
PsuI RGATCY 6 cut(s) 400, 913, 1680, 2077, 2446, 2721
PsyI GACNNNGTC 1 cut(s) 2999
PvuII CAGCTG 1 cut(s) 326
RsaI GTAC 6 cut(s) 160, 591, 1360, 1890, 2161, 2465
RsaNI GTAC 6 cut(s) 159, 590, 1359, 1889, 2160, 2464
RseI CAYNNNNRTG 4 cut(s) 1139, 1341, 1701, 2399
SalI GTCGAC 1 cut(s) 625
SatI GCNGC 3 cut(s) 396, 3015, 3028
Sau96I GGNCC 4 cut(s) 888, 2280, 2538, 2729
SbfI CCTGCAGG 1 cut(s) 1537
ScaI AGTACT 1 cut(s) 1890
SchI GAGTC 4 cut(s) 452, 1802, 2011, 2374
ScrFI CCNGG 6 cut(s) 1190, 2378, 2456, 2496, 2511, 2751
SdaI CCTGCAGG 1 cut(s) 1537
SduI GDGCHC 1 cut(s) 2228
SfaNI GCATC 6 cut(s) 278, 665, 1345, 1458, 1505, 2880
SfcI CTRYAG 2 cut(s) 396, 1533
SfuI TTCGAA 1 cut(s) 2260
SinI GGWCC 4 cut(s) 888, 2280, 2538, 2729
SmiI ATTTAAAT 1 cut(s) 1020
SmiMI CAYNNNNRTG 4 cut(s) 1139, 1341, 1701, 2399
SmlI CTYRAG 4 cut(s) 82, 502, 537, 1745
SmoI CTYRAG 4 cut(s) 82, 502, 537, 1745
SphI GCATGC 1 cut(s) 878
Sse8387I CCTGCAGG 1 cut(s) 1537
SsiI CCGC 2 cut(s) 1321, 2085
SspMI CTAG 8 cut(s) 66, 596, 1808, 1991, 2040, 2100, 2271, 2369
StyD4I CCNGG 6 cut(s) 1188, 2376, 2454, 2494, 2509, 2749
StyI CCWWGG 3 cut(s) 1982, 2385, 2725
SwaI ATTTAAAT 1 cut(s) 1020
TaaI ACNGT 8 cut(s) 659, 941, 1631, 1769, 2463, 2557, 2666, 2689
TaiI ACGT 3 cut(s) 164, 912, 2156
TaqII GACCGA 1 cut(s) 2593
TatI WGTACW 2 cut(s) 1888, 2159
TscAI CASTG 6 cut(s) 124, 944, 960, 1516, 1935, 2789
TseFI GTSAC 5 cut(s) 659, 1271, 2780, 2821, 2993
TseI GCWGC 3 cut(s) 395, 3014, 3027
Tsp45I GTSAC 5 cut(s) 659, 1271, 2780, 2821, 2993
TspGWI ACGGA 4 cut(s) 328, 901, 910, 2933
TspRI CASTG 6 cut(s) 124, 944, 960, 1516, 1935, 2789
Tth111I GACNNNGTC 1 cut(s) 2999
Vha464I CTTAAG 1 cut(s) 502
VneI GTGCAC 1 cut(s) 2224
VpaK11BI GGWCC 4 cut(s) 888, 2280, 2538, 2729
VspI ATTAAT 1 cut(s) 2697
XapI RAATTY 5 cut(s) 701, 994, 1150, 1526, 1589
XceI RCATGY 3 cut(s) 878, 1128, 2811
XcmI CCANNNNNNNNNTGG 1 cut(s) 1796
XmiI GTMKAC 1 cut(s) 626
XmnI GAANNNNTTC 7 cut(s) 113, 532, 1035, 1527, 2199, 2266, 2597
XspI CTAG 8 cut(s) 66, 596, 1808, 1991, 2040, 2100, 2271, 2369
ZrmI AGTACT 1 cut(s) 1890
Zsp2I ATGCAT 4 cut(s) 271, 1260, 1459, 2432
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.