DNA (cytosine-5)-methyltransferase
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| DNA_methylase | PF00145 | 218 - 305 | 1e-05 | C-5 cytosine-specific DNA methylase |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 844 |
| AclI | AACGTT | 1 cut(s) | 762 |
| AcsI | RAATTY | 3 cut(s) | 91, 506, 802 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 544, 702 |
| AflIII | ACRYGT | 1 cut(s) | 633 |
| AgsI | TTSAA | 6 cut(s) | 17, 22, 41, 194, 418, 512 |
| AjnI | CCWGG | 1 cut(s) | 542 |
| AluBI | AGCT | 6 cut(s) | 120, 285, 315, 361, 832, 971 |
| AluI | AGCT | 6 cut(s) | 120, 285, 315, 361, 832, 971 |
| Alw21I | GWGCWC | 1 cut(s) | 122 |
| Alw26I | GTCTC | 2 cut(s) | 624, 738 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 903 |
| Ama87I | CYCGRG | 2 cut(s) | 59, 947 |
| ApoI | RAATTY | 3 cut(s) | 91, 506, 802 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 380, 412 |
| AspS9I | GGNCC | 1 cut(s) | 535 |
| AsuHPI | GGTGA | 3 cut(s) | 332, 398, 803 |
| AvaI | CYCGRG | 2 cut(s) | 59, 947 |
| AvaII | GGWCC | 1 cut(s) | 535 |
| BanII | GRGCYC | 1 cut(s) | 122 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 946, 978 |
| Bbv12I | GWGCWC | 1 cut(s) | 122 |
| BccI | CCATC | 4 cut(s) | 163, 181, 272, 935 |
| BceAI | ACGGC | 1 cut(s) | 432 |
| BciT130I | CCWGG | 1 cut(s) | 544 |
| BciVI | GTATCC | 1 cut(s) | 722 |
| BclI | TGATCA | 2 cut(s) | 154, 375 |
| BcoDI | GTCTC | 2 cut(s) | 624, 738 |
| BfaI | CTAG | 5 cut(s) | 219, 461, 737, 884, 968 |
| BfmI | CTRYAG | 1 cut(s) | 977 |
| BfuI | GTATCC | 1 cut(s) | 722 |
| Bme1390I | CCNGG | 1 cut(s) | 544 |
| Bme18I | GGWCC | 1 cut(s) | 535 |
| BmeT110I | CYCGRG | 2 cut(s) | 59, 947 |
| BmgT120I | GGNCC | 1 cut(s) | 535 |
| BmrFI | CCNGG | 1 cut(s) | 544 |
| BmsI | GCATC | 1 cut(s) | 657 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 930, 962 |
| BpuEI | CTTGAG | 1 cut(s) | 515 |
| Bsa29I | ATCGAT | 1 cut(s) | 928 |
| BsaBI | GATNNNNATC | 2 cut(s) | 255, 571 |
| BsaJI | CCNNGG | 2 cut(s) | 348, 543 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 544, 702 |
| Bse8I | GATNNNNATC | 2 cut(s) | 255, 571 |
| BseBI | CCWGG | 1 cut(s) | 544 |
| BseCI | ATCGAT | 1 cut(s) | 928 |
| BseDI | CCNNGG | 2 cut(s) | 348, 543 |
| BseGI | GGATG | 3 cut(s) | 174, 298, 344 |
| BseJI | GATNNNNATC | 2 cut(s) | 255, 571 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 544, 702 |
| BseMII | CTCAG | 2 cut(s) | 592, 758 |
| BseRI | GAGGAG | 1 cut(s) | 365 |
| BshVI | ATCGAT | 1 cut(s) | 928 |
| BsiHKAI | GWGCWC | 1 cut(s) | 122 |
| BsiHKCI | CYCGRG | 2 cut(s) | 59, 947 |
| BslFI | GGGAC | 1 cut(s) | 885 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 544, 702 |
| BsmAI | GTCTC | 2 cut(s) | 624, 738 |
| BsmFI | GGGAC | 1 cut(s) | 885 |
| BsmI | GAATGC | 2 cut(s) | 449, 589 |
| BsoBI | CYCGRG | 2 cut(s) | 59, 947 |
| Bsp1286I | GDGCHC | 1 cut(s) | 122 |
| Bsp143I | GATC | 4 cut(s) | 154, 256, 375, 880 |
| BspACI | CCGC | 1 cut(s) | 844 |
| BspCNI | CTCAG | 2 cut(s) | 591, 759 |
| BspDI | ATCGAT | 1 cut(s) | 928 |
| BspHI | TCATGA | 1 cut(s) | 333 |
| BssECI | CCNNGG | 2 cut(s) | 348, 543 |
| BssMI | GATC | 4 cut(s) | 154, 256, 375, 880 |
| Bst2UI | CCWGG | 1 cut(s) | 544 |
| Bst4CI | ACNGT | 3 cut(s) | 392, 604, 855 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 903 |
| BstC8I | GCNNGC | 1 cut(s) | 118 |
| BstDEI | CTNAG | 3 cut(s) | 180, 578, 767 |
| BstF5I | GGATG | 3 cut(s) | 174, 298, 344 |
| BstKTI | GATC | 4 cut(s) | 157, 259, 378, 883 |
| BstMAI | GTCTC | 2 cut(s) | 624, 738 |
| BstMBI | GATC | 4 cut(s) | 154, 256, 375, 880 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 903 |
| BstNI | CCWGG | 1 cut(s) | 544 |
| BstNSI | RCATGY | 1 cut(s) | 637 |
| BstSCI | CCNGG | 1 cut(s) | 542 |
| BstSFI | CTRYAG | 1 cut(s) | 977 |
| Bsu15I | ATCGAT | 1 cut(s) | 928 |
| BsuI | GTATCC | 1 cut(s) | 722 |
| BsuTUI | ATCGAT | 1 cut(s) | 928 |
| BtsCI | GGATG | 3 cut(s) | 174, 298, 344 |
| Cac8I | GCNNGC | 1 cut(s) | 118 |
| CaiI | CAGNNNCTG | 1 cut(s) | 903 |
| CciI | TCATGA | 1 cut(s) | 333 |
| Cfr13I | GGNCC | 1 cut(s) | 535 |
| ClaI | ATCGAT | 1 cut(s) | 928 |
| CviAII | CATG | 5 cut(s) | 123, 212, 334, 367, 634 |
| DdeI | CTNAG | 3 cut(s) | 180, 578, 767 |
| DpnI | GATC | 4 cut(s) | 156, 258, 377, 882 |
| DpnII | GATC | 4 cut(s) | 154, 256, 375, 880 |
| Ecl136II | GAGCTC | 1 cut(s) | 120 |
| Eco24I | GRGCYC | 1 cut(s) | 122 |
| Eco32I | GATATC | 1 cut(s) | 932 |
| Eco47I | GGWCC | 1 cut(s) | 535 |
| Eco53kI | GAGCTC | 1 cut(s) | 120 |
| Eco88I | CYCGRG | 2 cut(s) | 59, 947 |
| EcoICRI | GAGCTC | 1 cut(s) | 120 |
| EcoRII | CCWGG | 1 cut(s) | 542 |
| EcoRV | GATATC | 1 cut(s) | 932 |
| EcoT22I | ATGCAT | 1 cut(s) | 589 |
| EcoT38I | GRGCYC | 1 cut(s) | 122 |
| FaeI | CATG | 5 cut(s) | 126, 215, 337, 370, 637 |
| FaqI | GGGAC | 1 cut(s) | 885 |
| FatI | CATG | 5 cut(s) | 122, 211, 333, 366, 633 |
| FbaI | TGATCA | 2 cut(s) | 154, 375 |
| FokI | GGATG | 3 cut(s) | 181, 305, 331 |
| FriOI | GRGCYC | 1 cut(s) | 122 |
| FspBI | CTAG | 5 cut(s) | 219, 461, 737, 884, 968 |
| Hin1II | CATG | 5 cut(s) | 126, 215, 337, 370, 637 |
| HincII | GTYRAC | 1 cut(s) | 754 |
| HindII | GTYRAC | 1 cut(s) | 754 |
| HindIII | AAGCTT | 1 cut(s) | 283 |
| HinfI | GANTC | 7 cut(s) | 62, 251, 337, 457, 808, 945, 959 |
| HpaI | GTTAAC | 1 cut(s) | 754 |
| HphI | GGTGA | 3 cut(s) | 332, 398, 803 |
| Hpy166II | GTNNAC | 1 cut(s) | 754 |
| Hpy188I | TCNGA | 7 cut(s) | 256, 271, 304, 349, 594, 748, 768 |
| Hpy188III | TCNNGA | 9 cut(s) | 59, 152, 206, 219, 334, 433, 580, 737, 818 |
| Hpy8I | GTNNAC | 1 cut(s) | 754 |
| Hpy99I | CGWCG | 1 cut(s) | 608 |
| HpyAV | CCTTC | 2 cut(s) | 707, 824 |
| HpyCH4III | ACNGT | 3 cut(s) | 392, 604, 855 |
| HpyCH4IV | ACGT | 1 cut(s) | 762 |
| HpyCH4V | TGCA | 4 cut(s) | 242, 587, 826, 906 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 903 |
| HpyF3I | CTNAG | 3 cut(s) | 180, 578, 767 |
| HpySE526I | ACGT | 1 cut(s) | 762 |
| Hsp92II | CATG | 5 cut(s) | 126, 215, 337, 370, 637 |
| Ksp22I | TGATCA | 2 cut(s) | 154, 375 |
| KspAI | GTTAAC | 1 cut(s) | 754 |
| Kzo9I | GATC | 4 cut(s) | 154, 256, 375, 880 |
| LmnI | GCTCC | 1 cut(s) | 781 |
| LweI | GCATC | 1 cut(s) | 657 |
| MaeI | CTAG | 5 cut(s) | 219, 461, 737, 884, 968 |
| MaeII | ACGT | 1 cut(s) | 762 |
| MaeIII | GTNAC | 1 cut(s) | 386 |
| MalI | GATC | 4 cut(s) | 156, 258, 377, 882 |
| MboI | GATC | 4 cut(s) | 154, 256, 375, 880 |
| MboII | GAAGA | 5 cut(s) | 126, 196, 220, 733, 954 |
| MfeI | CAATTG | 1 cut(s) | 17 |
| MhlI | GDGCHC | 1 cut(s) | 122 |
| MluCI | AATT | 5 cut(s) | 17, 91, 201, 506, 802 |
| MlyI | GAGTC | 3 cut(s) | 71, 346, 939 |
| MmeI | TCCRAC | 2 cut(s) | 162, 451 |
| MnlI | CCTC | 9 cut(s) | 97, 277, 319, 343, 346, 668, 762, 789, 943 |
| Mph1103I | ATGCAT | 1 cut(s) | 589 |
| MseI | TTAA | 2 cut(s) | 753, 834 |
| MslI | CAYNNNNRTG | 2 cut(s) | 110, 939 |
| MspR9I | CCNGG | 1 cut(s) | 544 |
| MunI | CAATTG | 1 cut(s) | 17 |
| Mva1269I | GAATGC | 2 cut(s) | 449, 589 |
| MvaI | CCWGG | 1 cut(s) | 544 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 903 |
| NdeII | GATC | 4 cut(s) | 154, 256, 375, 880 |
| NlaIII | CATG | 5 cut(s) | 126, 215, 337, 370, 637 |
| NmuCI | GTSAC | 1 cut(s) | 386 |
| NsiI | ATGCAT | 1 cut(s) | 589 |
| NspI | RCATGY | 1 cut(s) | 637 |
| PaeR7I | CTCGAG | 2 cut(s) | 59, 947 |
| PagI | TCATGA | 1 cut(s) | 333 |
| PciI | ACATGT | 1 cut(s) | 633 |
| PctI | GAATGC | 2 cut(s) | 449, 589 |
| PfeI | GAWTC | 4 cut(s) | 251, 457, 808, 959 |
| PflFI | GACNNNGTC | 1 cut(s) | 602 |
| PleI | GAGTC | 3 cut(s) | 70, 345, 939 |
| PpsI | GAGTC | 3 cut(s) | 70, 345, 939 |
| PscI | ACATGT | 1 cut(s) | 633 |
| Psp124BI | GAGCTC | 1 cut(s) | 122 |
| Psp1406I | AACGTT | 1 cut(s) | 762 |
| Psp6I | CCWGG | 1 cut(s) | 542 |
| PspGI | CCWGG | 1 cut(s) | 542 |
| PspPI | GGNCC | 1 cut(s) | 535 |
| PspXI | VCTCGAGB | 1 cut(s) | 947 |
| PstNI | CAGNNNCTG | 1 cut(s) | 903 |
| PsyI | GACNNNGTC | 1 cut(s) | 602 |
| RseI | CAYNNNNRTG | 2 cut(s) | 110, 939 |
| SacI | GAGCTC | 1 cut(s) | 122 |
| SaqAI | TTAA | 2 cut(s) | 753, 834 |
| Sau3AI | GATC | 4 cut(s) | 154, 256, 375, 880 |
| Sau96I | GGNCC | 1 cut(s) | 535 |
| SchI | GAGTC | 3 cut(s) | 71, 346, 939 |
| ScrFI | CCNGG | 1 cut(s) | 544 |
| SduI | GDGCHC | 1 cut(s) | 122 |
| SfaNI | GCATC | 1 cut(s) | 657 |
| SfcI | CTRYAG | 1 cut(s) | 977 |
| Sfr274I | CTCGAG | 2 cut(s) | 59, 947 |
| SinI | GGWCC | 1 cut(s) | 535 |
| SlaI | CTCGAG | 2 cut(s) | 59, 947 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 110, 939 |
| SmlI | CTYRAG | 3 cut(s) | 59, 494, 947 |
| SmoI | CTYRAG | 3 cut(s) | 59, 494, 947 |
| Sse9I | AATT | 5 cut(s) | 17, 91, 201, 506, 802 |
| SsiI | CCGC | 1 cut(s) | 844 |
| SspMI | CTAG | 5 cut(s) | 219, 461, 737, 884, 968 |
| SstI | GAGCTC | 1 cut(s) | 122 |
| StyD4I | CCNGG | 1 cut(s) | 542 |
| TaaI | ACNGT | 3 cut(s) | 392, 604, 855 |
| TaiI | ACGT | 1 cut(s) | 765 |
| TaqI | TCGA | 4 cut(s) | 8, 60, 928, 948 |
| TasI | AATT | 5 cut(s) | 17, 91, 201, 506, 802 |
| TfiI | GAWTC | 4 cut(s) | 251, 457, 808, 959 |
| Tru1I | TTAA | 2 cut(s) | 753, 834 |
| Tru9I | TTAA | 2 cut(s) | 753, 834 |
| TseFI | GTSAC | 1 cut(s) | 386 |
| Tsp45I | GTSAC | 1 cut(s) | 386 |
| TspDTI | ATGAA | 5 cut(s) | 456, 519, 689, 734, 855 |
| TspGWI | ACGGA | 1 cut(s) | 704 |
| Tth111I | GACNNNGTC | 1 cut(s) | 602 |
| VpaK11BI | GGWCC | 1 cut(s) | 535 |
| XapI | RAATTY | 3 cut(s) | 91, 506, 802 |
| XbaI | TCTAGA | 2 cut(s) | 218, 736 |
| XceI | RCATGY | 1 cut(s) | 637 |
| XhoI | CTCGAG | 2 cut(s) | 59, 947 |
| XspI | CTAG | 5 cut(s) | 219, 461, 737, 884, 968 |
| Zsp2I | ATGCAT | 1 cut(s) | 589 |