Rh1AG201800

TMV resistance protein N-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1A
OG0000036
Physical Location & Seq
Forward (+)
38230365 .. 38275084
44720 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1AG201800.1

Sequence Viewer

Length: 2055 bp
ATGGAACAAAAGCAAAAGAATCAACAATCACATAATAAGGAGAAATTGAGAAAGAAACTCACAGATCGGGATTTCGAACCTCTCCGCGTCTCCGCGTCCTCTCAGCCTCCCCACTTCTTTGAGTCACCGCGTTGGCAGAGGAGAAGAGATGGAGGAAACATTGAGAAGGGCAGTTTGTTATACACTGCTTATGGTTCAAATGGTCAGTGGGGCTTATTTGAGAGGAATTTTGGAAGGACAGATACCCAAGAGCCAGATCCAGAGGGAAGGGTTCCCCAGTGGGACAAAGCATGTGTTCAAGAAATGAAAGACAAGTTTTCTGCCGTTGGCTTTGGCCCTCGCCAGATAGCCACAGAAACTTTATTAGCCACTGATCCAGAAGTTTTGCCGTGGGTTCAGAAGTATCAGTGCAGCAGGGAAACAGTGTCAGAAACAGATTATGAGCATCTCAGTTCTCATTGTTGGGTGGTCAAGTTGGGGAGTTATTTGCCAGGCTCTTTACTATCATTAAGTCTAAGTGGGTGCAATCTTTCTGATGATGCTTTTCCTGTGGATTTCACTAGCCCTTCCTCTCTGGGAAGTTTAAATCTAAGTGATAATCCAATAACTGGCCTACCCAATTGCGTCAAGGGTCTGACAAGTCTAGATGAACTCTCCTTTTACAACTGTGAGCCTCGAATCCCTTGTAGAGCTACCAAAAGTAGGTTTCAAGTTGAATGTATCCGGTTGCGAAGCATTGGTAAGAATAACATATCAGTCAAACTCCTGTCATCCTGTGCCCAATTTCCACGCCTGAGTGGTAAGAACTACAGCCTAGTTGAGTGGGAATATGAATATAAGTTAGAACCCATTGGAAAAGTTGATGCAGAATTGCTCAAACTTTTGGGCTTGAGCAACTTGGACCTTGAATGCAGGCCAACCATTCGGTTGTGCGCAAAATATACTGGTTACGACATAATTCATCATGGTGGAATACAGGGACTGCATGAGTATGGTTGTACAAACTCTTACTTCCGAGGAAATGCAAGAAAGATAGACATGTTTAGTACATTTCTTCCTGGGAATGAGGTTCCAGGCCAATTCAGCCATAGAACTAAAGGCTCTTCCTCAATATCATTATCTGTGCCTTTGCCTTCCGCTCATGATCTCAGAATCCGAGGCTTTAACATCTTCATTGTCTATGCAATTTTAGACAATGACGATGAAAGATATTCTTCATGTACTGACCAGGGTTCAATAACTATCAAAGTCATAAATGAGAGCGACGACAGCAACTGGCATCATGAGCCAATATATCACGGTATTCCGGGTAAGGGAGAAGACATGATATGGTTAACCCATTGGAATATGGAGAATCAAGTAAAAGGTAGGGATCAAGTGGCTGTTTCACTCTCGGTAAAACATGCAAGGTTTCGGTATCAGGTAAAGGAGTGGGGGATCCAGGTTGTACAGGAGAAGCAAGAAGGTAAGATGTGTACCGACCACTACACCACAAATCCCATTTGTTTTCCATGTGCCACTGGTGGAGATTTGTTAACATCTGATGAGCCGTTGAGGGGAACATACTTGCTGTCCTATGAACCTGATTCAACGGTAGATAAAGATAAAAAAGGAGATGATGAAGAAGAGGCAGTGGGTGATCCTATTCCTGCATCAGCAATGGGGGATGGCAGCAACAACAGTGATCGGGGTCTCAGAAAGTGGAAGGTGCTCATCATTGCCGCTATCATCCTTGCTGCTGCCATCAGCGCTGCTCATCGTTTTGAAGACTCTGCTCTAGACACAAATTTAGCTGAAACTGTCACTAATGCAGACAATGAAGAAGAACAACGGGATGAAGATGACAAGCTTGCAACAGCGACCAATACTGACGGCAGTAACAACCGTGCGCGGGATCCCAGAAAGTGGAAGGTGCTCATCATTGCTGCTGTCATATTTCCCAGGAAGCTTGGGATGCCTCCTATCATATTAAGCCTGATCATTAGCTTTAAGTCTTCAACAATGAGCCAAGCTCTATCAGAATTTTTCCCTTTAGATCGATGGTTTGGAAGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_8 NB-ARC TIR

Protein Analysis

684

Amino Acids

76.78

Weight (kDa)

5.76

Isoelectric Point (pI)

35.52

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000036)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G57630 AT1G72930 AT5G38344
fragaria_vesca FvH4_1g27020 FvH4_2g00931 FvH4_2g17330 FvH4_2g17330 FvH4_2g17340 FvH4_2g17350 FvH4_2g20690 FvH4_5g15301 FvH4_5g34194 FvH4_5g38530 FvH4_5g38740 FvH4_5g38740 FvH4_5g38740 FvH4_6g03800 FvH4_7g09791 FvH4_7g09800 FvH4_7g09800 FvH4_7g10510 FvH4_7g10520 FvH4_7g10520 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750
malus_domestica MD02G1217100.v1.1 MD02G1217200.v1.1 MD02G1217400.v1.1 MD02G1217600.v1.1 MD02G1264800.v1.1 MD02G1264900.v1.1 MD02G1302100.v1.1 MD04G1010700.v1.1 MD05G1006800.v1.1 MD05G1140100.v1.1 MD05G1140200.v1.1 MD05G1152200.v1.1 MD07G1073500.v1.1 MD07G1101700.v1.1 MD07G1102200.v1.1 MD07G1103200.v1.1 MD07G1112300.v1.1 MD08G1018200.v1.1 MD08G1018400.v1.1 MD08G1018800.v1.1 MD08G1019000.v1.1 MD08G1019100.v1.1 MD08G1019200.v1.1 MD08G1019300.v1.1 MD08G1019400.v1.1 MD08G1019600.v1.1 MD08G1019900.v1.1 MD08G1020000.v1.1 MD08G1020200.v1.1 MD08G1020500.v1.1 MD08G1020700.v1.1 MD08G1020800.v1.1 MD08G1040700.v1.1 MD11G1112400.v1.1 MD12G1068600.v1.1 MD12G1193200.v1.1 MD13G1050600.v1.1 MD15G1374900.v1.1 MD15G1375100.v1.1 MD15G1416500.v1.1 MD17G1072500.v1.1 MD17G1274200.v1.1 MD17G1274900.v1.1
prunus_persica Prupe.2G121000_v2.0.a1 Prupe.2G121000_v2.0.a1 Prupe.2G125800_v2.0.a1 Prupe.2G126000_v2.0.a1 Prupe.2G126100_v2.0.a1 Prupe.2G126200_v2.0.a1 Prupe.2G126300_v2.0.a1 Prupe.2G126400_v2.0.a1 Prupe.2G126500_v2.0.a1 Prupe.2G126600_v2.0.a1 Prupe.2G126700_v2.0.a1 Prupe.2G126700_v2.0.a1 Prupe.2G126800_v2.0.a1 Prupe.2G126900_v2.0.a1 Prupe.2G127000_v2.0.a1 Prupe.2G127000_v2.0.a1 Prupe.2G127000_v2.0.a1 Prupe.2G127000_v2.0.a1 Prupe.2G135500_v2.0.a1 Prupe.2G135600_v2.0.a1 Prupe.2G135700_v2.0.a1 Prupe.2G135700_v2.0.a1 Prupe.3G009800_v2.0.a1 Prupe.3G010200_v2.0.a1 Prupe.3G131000_v2.0.a1 Prupe.4G260800_v2.0.a1 Prupe.4G260900_v2.0.a1 Prupe.6G083100_v2.0.a1 Prupe.6G083200_v2.0.a1 Prupe.6G083400_v2.0.a1 Prupe.6G132100_v2.0.a1 Prupe.8G184900_v2.0.a1 Prupe.8G185200_v2.0.a1 Prupe.8G185300_v2.0.a1
pyrus_communis pycom02g17870 pycom02g17880 pycom02g19520 pycom02g22610 pycom02g22630 pycom02g22680 pycom05g13540 pycom05g14680 pycom07g04880 pycom07g04890 pycom07g05690 pycom07g05710 pycom07g05720 pycom07g05750 pycom07g05780 pycom07g06300 pycom07g08320 pycom07g08330 pycom07g08350 pycom07g08360 pycom07g08370 pycom07g08410 pycom07g08420 pycom07g08430 pycom07g08440 pycom07g08470 pycom07g08480 pycom07g08520 pycom07g08550 pycom07g08560 pycom07g08640 pycom07g08660 pycom07g08670 pycom07g08680 pycom07g08690 pycom07g08720 pycom07g08730 pycom07g08790 pycom07g08800 pycom07g08810 pycom07g08860 pycom07g08890 pycom07g09720 pycom08g01590 pycom08g01600 pycom08g01620 pycom08g01630 pycom08g01640 pycom10g12630 pycom15g16490 pycom17g07200 pycom17g07210 pycom17g07220 pycom17g11730 pycom17g11740 pycom17g27340 pycom17g27380
rosa_chinensis RchiOBHm_Chr1g0342571 RchiOBHm_Chr1g0346231 RchiOBHm_Chr1g0346831 RchiOBHm_Chr1g0346891 RchiOBHm_Chr1g0348311 RchiOBHm_Chr1g0348321 RchiOBHm_Chr1g0348331 RchiOBHm_Chr1g0348361 RchiOBHm_Chr1g0348371 RchiOBHm_Chr1g0348381 RchiOBHm_Chr1g0348401 RchiOBHm_Chr1g0348411 RchiOBHm_Chr1g0348421 RchiOBHm_Chr1g0348431 RchiOBHm_Chr2g0130881 RchiOBHm_Chr3g0487331 RchiOBHm_Chr5g0060371 RchiOBHm_Chr6g0246491 RchiOBHm_Chr6g0246871 RchiOBHm_Chr6g0250311 RchiOBHm_Chr6g0250781 RchiOBHm_Chr6g0251431 RchiOBHm_Chr6g0281871 RchiOBHm_Chr6g0281881 RchiOBHm_Chr6g0281931 RchiOBHm_Chr6g0281941 RchiOBHm_Chr6g0281951 RchiOBHm_Chr6g0281971 RchiOBHm_Chr6g0281981 RchiOBHm_Chr7g0240541 RchiOBHm_Chr7g0240631 RchiOBHm_Chr7g0240671
rosa_laevigata RLG00000000627 RLG00000000631 RLG00000000641 RLG00000000645 RLG00000000652 RLG00000000662 RLG00000000663 RLG00000000667 RLG00000000670 RLG00000000702 RLG00000001216 RLG00000001219 RLG00000007678 RLG00000012923 RLG00000012996 RLG00000013243 RLG00000017513 RLG00000017514 RLG00000020936 RLG00000022755 RLG00000023013 RLG00000028646 RLG00000028654 RLG00000028662 RLG00000028665 RLG00000028667 RLG00000028711 RLG00000028714 RLG00000028716 RLG00000028770 RLG00000028771 RLG00000028773 RLG00000028778 RLG00000028798 RLG00000028809 RLG00000028813 RLG00000029334 RLG00000030003 RLG00000033910 RLG00000034358 RLG00000035430
rosa_multiflora Rmu_co8031134.1_g000001 Rmu_co8092796.1_g000001 Rmu_co8130156.1_g000001 Rmu_co8325323.1_g000001 Rmu_co8424083.1_g000002 Rmu_sc0000008.1_g000003 Rmu_sc0000008.1_g000011 Rmu_sc0000008.1_g000015 Rmu_sc0000008.1_g000020 Rmu_sc0000091.1_g000015 Rmu_sc0000091.1_g000018 Rmu_sc0000091.1_g000029 Rmu_sc0000091.1_g000031 Rmu_sc0000391.1_g000004 Rmu_sc0001070.1_g000030 Rmu_sc0001293.1_g000016 Rmu_sc0001674.1_g000006 Rmu_sc0001731.1_g000002 Rmu_sc0001731.1_g000003 Rmu_sc0001731.1_g000005 Rmu_sc0001911.1_g000029 Rmu_sc0001913.1_g000038 Rmu_sc0001955.1_g000025 Rmu_sc0001992.1_g000022 Rmu_sc0001992.1_g000028 Rmu_sc0001992.1_g000031 Rmu_sc0002517.1_g000013 Rmu_sc0002517.1_g000017 Rmu_sc0002551.1_g000022 Rmu_sc0002551.1_g000029 Rmu_sc0002551.1_g000038 Rmu_sc0002705.1_g000015 Rmu_sc0002705.1_g000016 Rmu_sc0002882.1_g000055 Rmu_sc0003232.1_g000027 Rmu_sc0003363.1_g000037 Rmu_sc0003600.1_g000054 Rmu_sc0003918.1_g000011 Rmu_sc0004395.1_g000011 Rmu_sc0005071.1_g000004 Rmu_sc0005255.1_g000018 Rmu_sc0005327.1_g000004 Rmu_sc0005597.1_g000007 Rmu_sc0007060.1_g000007 Rmu_sc0007310.1_g000003 Rmu_sc0007383.1_g000014 Rmu_sc0007799.1_g000003 Rmu_sc0008477.1_g000016 Rmu_sc0010151.1_g000009 Rmu_sc0011217.1_g000005 Rmu_sc0016269.1_g000006 Rmu_sc0021495.1_g000001 Rmu_sc0027364.1_g000001 Rmu_sc0029432.1_g000001 Rmu_sc0041386.1_g000001 Rmu_ssc0000126.1_g000023 Rmu_ssc0000126.1_g000027
rosa_roxburghii Rroxscaffold_1G00006130 Rroxscaffold_1G00023320 Rroxscaffold_1G00038770 Rroxscaffold_2G00119800 Rroxscaffold_2G00121860 Rroxscaffold_3G00219780 Rroxscaffold_3G00219890 Rroxscaffold_4G00306740 Rroxscaffold_4G00306820 Rroxscaffold_4G00307000 Rroxscaffold_4G00307010 Rroxscaffold_4G00307020 Rroxscaffold_4G00308030 Rroxscaffold_4G00308070 Rroxscaffold_4G00308450 Rroxscaffold_4G00308460 Rroxscaffold_4G00315320 Rroxscaffold_5G00352470 Rroxscaffold_5G00371420 Rroxscaffold_6G00392300 Rroxscaffold_6G00394870 Rroxscaffold_6G00394890 Rroxscaffold_7G00186700 Rroxscaffold_7G00194980 Rroxscaffold_7G00216840
rosa_rugosa Rorug01G0076100 Rorug01G0128100 Rorug01G0149000.1 Rorug01G0149500.1 Rorug01G0180000 Rorug01G0180100 Rorug01G0182900 Rorug01G0184000 Rorug01G0184100 Rorug01G0184300 Rorug01G0184600 Rorug01G0184700 Rorug01G0184700 Rorug01G0184900 Rorug01G0185000 Rorug01G0185100 Rorug01G0189300 Rorug01G0194100 Rorug01G0194100 Rorug01G0194200 Rorug01G0194400 Rorug01G0194400 Rorug01G0194500 Rorug02G0090400 Rorug02G0090400 Rorug03G0233000 Rorug03G0233100 Rorug05G0178600 Rorug05G0178700 Rorug05G0579200 Rorug06G0144100 Rorug06G0144300 Rorug06G0144300 Rorug06G0179300 Rorug06G0208800 Rorug07G0323500 Rorug07G0337000
rosa_samantha Rh1AG046100 Rh1AG201400 Rh1AG201800 Rh1AG202100 Rh1AG202600 Rh1AG211500 Rh1AG211800 Rh1AG212200 Rh1AG212500 Rh1AG212600 Rh1AG214200 Rh1BG168000 Rh1BG168300 Rh1BG168500 Rh1BG177900 Rh1BG178200 Rh1BG178300 Rh1BG178800 Rh1BG178900 Rh1CG080900 Rh1CG183300 Rh1CG186300 Rh1CG186700 Rh1CG187000 Rh1CG187300 Rh1CG193400 Rh1CG195800 Rh1CG196000 Rh1CG196100 Rh1CG196400 Rh1CG196500 Rh1CG196800 Rh1CG198800 Rh1CG442600 Rh1DG086200 Rh1DG155400 Rh1DG156200 Rh1DG194000 Rh1DG194300 Rh1DG194900 Rh1DG197000 Rh1DG198800 Rh1DG199000 Rh1DG199200 Rh1DG202000 Rh1DG203900 Rh1DG207600 Rh1DG207900 Rh1DG208000 Rh1DG208500 Rh1DG208600 Rh1DG208700 Rh3CG339100 Rh5AG106500 Rh5AG264800 Rh5AG265300 Rh5CG302800 Rh5DG277900 Rh6AG257600 Rh6AG257700 Rh6BG260500 Rh6BG260700 Rh6CG259600 Rh6CG259700 Rh6DG252100 Rh7DG126900
rosa_wichuraiana Rw0G005780 Rw0G007540 Rw0G007550 Rw0G007560 Rw0G009390 Rw1G016900 Rw1G016930 Rw1G016940 Rw1G016970 Rw1G017860 Rw1G017890 Rw1G017900 Rw1G017910 Rw1G017920 Rw1G017960 Rw1G017970 Rw1G017980 Rw1G018150 Rw4G000830 Rw5G009290 Rw5G018950 Rw5G024850 Rw5G024870 Rw5G040460 Rw6G022290 Rw7G041020 Rw7G041200 Rw7G041360 Rw7G041450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 934
AccB7I CCANNNNNTGG 2 cut(s) 608, 1905
AccBSI CCGCTC 1 cut(s) 1139
AccII CGCG 4 cut(s) 87, 95, 130, 1891
AciI CCGC 6 cut(s) 85, 93, 128, 1137, 1722, 1891
AclWI GGATC 8 cut(s) 251, 368, 1380, 1432, 1445, 1634, 1889, 1902
AcsI RAATTY 3 cut(s) 226, 1786, 2021
AfaI GTAC 5 cut(s) 1000, 1048, 1222, 1449, 1477
AfeI AGCGCT 1 cut(s) 1750
AfiI CCNNNNNNNGG 6 cut(s) 608, 702, 1313, 1556, 1891, 1905
AflIII ACRYGT 1 cut(s) 1038
AgsI TTSAA 9 cut(s) 198, 299, 710, 716, 908, 1236, 1590, 1766, 1998
AjnI CCWGG 6 cut(s) 490, 1057, 1072, 1227, 1440, 1940
AluBI AGCT 6 cut(s) 692, 1793, 1849, 1948, 1986, 2012
AluI AGCT 6 cut(s) 692, 1793, 1849, 1948, 1986, 2012
Alw21I GWGCWC 2 cut(s) 1713, 1917
Alw26I GTCTC 2 cut(s) 94, 1697
AlwI GGATC 8 cut(s) 251, 368, 1380, 1432, 1445, 1634, 1889, 1902
AlwNI CAGNNNCTG 2 cut(s) 982, 1275
Aor51HI AGCGCT 1 cut(s) 1750
AoxI GGCC 4 cut(s) 334, 610, 914, 1075
ApeKI GCWGC 6 cut(s) 411, 1671, 1736, 1739, 1751, 1925
ApoI RAATTY 3 cut(s) 226, 1786, 2021
AspLEI GCGC 3 cut(s) 935, 1751, 1891
AspS9I GGNCC 2 cut(s) 335, 901
AsuC2I CCSGG 1 cut(s) 1308
AsuHPI GGTGA 2 cut(s) 117, 1649
AsuII TTCGAA 1 cut(s) 75
AvaII GGWCC 1 cut(s) 901
BaeGI GKGCMC 1 cut(s) 781
BamHI GGATCC 2 cut(s) 1437, 1894
BarI GAAGNNNNNNTAC 2 cut(s) 226, 258
BbsI GAAGAC 3 cut(s) 1326, 1773, 1986
Bbv12I GWGCWC 2 cut(s) 1713, 1917
BbvI GCAGC 6 cut(s) 423, 1683, 1723, 1726, 1738, 1912
BccI CCATC 4 cut(s) 143, 1661, 1751, 2034
BceAI ACGGC 4 cut(s) 308, 373, 1534, 1888
BciT130I CCWGG 6 cut(s) 492, 1059, 1074, 1229, 1442, 1942
BciVI GTATCC 1 cut(s) 731
BclI TGATCA 1 cut(s) 1977
BcnI CCSGG 1 cut(s) 1308
BcoDI GTCTC 2 cut(s) 94, 1697
BfaI CTAG 4 cut(s) 561, 644, 815, 1778
BfmI CTRYAG 1 cut(s) 808
BfoI RGCGCY 1 cut(s) 1752
BfuI GTATCC 1 cut(s) 731
BisI GCNGC 7 cut(s) 412, 1672, 1722, 1737, 1740, 1752, 1926
BlsI GCNGC 7 cut(s) 413, 1673, 1723, 1738, 1741, 1753, 1927
Bme1390I CCNGG 7 cut(s) 492, 1059, 1074, 1229, 1308, 1442, 1942
Bme18I GGWCC 1 cut(s) 901
BmgT120I GGNCC 2 cut(s) 335, 901
BmiI GGNNCC 4 cut(s) 273, 1071, 1439, 1896
BmrFI CCNGG 7 cut(s) 492, 1059, 1074, 1229, 1308, 1442, 1942
BmrI ACTGGG 1 cut(s) 271
BmsI GCATC 6 cut(s) 454, 529, 853, 1288, 1661, 1944
BmuI ACTGGG 1 cut(s) 271
BpiI GAAGAC 3 cut(s) 1326, 1773, 1986
BplI GAGNNNNNCTC 2 cut(s) 1996, 2028
Bpu14I TTCGAA 1 cut(s) 75
BpuEI CTTGAG 1 cut(s) 910
BpuMI CCSGG 1 cut(s) 1308
Bsa29I ATCGAT 1 cut(s) 2038
BsaI GGTCTC 1 cut(s) 1697
BsaJI CCNNGG 6 cut(s) 389, 1015, 1058, 1156, 1228, 1940
BsaWI WCCGGW 1 cut(s) 723
Bsc4I CCNNNNNNNGG 6 cut(s) 608, 702, 1313, 1556, 1891, 1905
Bse1I ACTGG 5 cut(s) 277, 613, 949, 1280, 1525
Bse3DI GCAATG 3 cut(s) 1665, 1716, 1920
BseBI CCWGG 6 cut(s) 492, 1059, 1074, 1229, 1442, 1942
BseCI ATCGAT 1 cut(s) 2038
BseDI CCNNGG 6 cut(s) 389, 1015, 1058, 1156, 1228, 1940
BseGI GGATG 5 cut(s) 770, 1672, 1728, 1840, 1959
BseLI CCNNNNNNNGG 6 cut(s) 608, 702, 1313, 1556, 1891, 1905
BseMI GCAATG 3 cut(s) 1665, 1716, 1920
BseMII CTCAG 5 cut(s) 116, 463, 785, 1162, 1708
BseNI ACTGG 5 cut(s) 277, 613, 949, 1280, 1525
BseRI GAGGAG 1 cut(s) 154
BseSI GKGCMC 1 cut(s) 781
BseXI GCAGC 6 cut(s) 423, 1683, 1723, 1726, 1738, 1912
BsgI GTGCAG 1 cut(s) 430
Bsh1236I CGCG 4 cut(s) 87, 95, 130, 1891
BshFI GGCC 4 cut(s) 336, 612, 916, 1077
BshVI ATCGAT 1 cut(s) 2038
BsiHKAI GWGCWC 2 cut(s) 1713, 1917
BsiSI CCGG 2 cut(s) 724, 1307
BslFI GGGAC 2 cut(s) 296, 993
BslI CCNNNNNNNGG 6 cut(s) 608, 702, 1313, 1556, 1891, 1905
BsmAI GTCTC 2 cut(s) 94, 1697
BsmBI CGTCTC 1 cut(s) 94
BsmFI GGGAC 2 cut(s) 296, 993
BsmI GAATGC 1 cut(s) 914
BsnI GGCC 4 cut(s) 336, 612, 916, 1077
Bso31I GGTCTC 1 cut(s) 1697
Bsp119I TTCGAA 1 cut(s) 75
Bsp1286I GDGCHC 3 cut(s) 781, 1713, 1917
Bsp1407I TGTACA 2 cut(s) 998, 1447
BspACI CCGC 6 cut(s) 85, 93, 128, 1137, 1722, 1891
BspANI GGCC 4 cut(s) 336, 612, 916, 1077
BspCNI CTCAG 5 cut(s) 115, 462, 786, 1161, 1707
BspDI ATCGAT 1 cut(s) 2038
BspFNI CGCG 4 cut(s) 87, 95, 130, 1891
BspHI TCATGA 2 cut(s) 1141, 1282
BspLI GGNNCC 4 cut(s) 273, 1071, 1439, 1896
BspPI GGATC 8 cut(s) 251, 368, 1380, 1432, 1445, 1634, 1889, 1902
BspQI GCTCTTC 1 cut(s) 1108
BspT104I TTCGAA 1 cut(s) 75
BspTNI GGTCTC 1 cut(s) 1697
BsrBI CCGCTC 1 cut(s) 1139
BsrDI GCAATG 3 cut(s) 1665, 1716, 1920
BsrGI TGTACA 2 cut(s) 998, 1447
BsrI ACTGG 5 cut(s) 277, 613, 949, 1280, 1525
BssECI CCNNGG 6 cut(s) 389, 1015, 1058, 1156, 1228, 1940
Bst2UI CCWGG 6 cut(s) 492, 1059, 1074, 1229, 1442, 1942
Bst4CI ACNGT 7 cut(s) 424, 668, 1301, 1594, 1682, 1801, 1886
Bst6I CTCTTC 3 cut(s) 139, 1108, 1620
BstAUI TGTACA 2 cut(s) 998, 1447
BstBI TTCGAA 1 cut(s) 75
BstC8I GCNNGC 2 cut(s) 914, 1851
BstDEI CTNAG 7 cut(s) 102, 449, 515, 590, 794, 1148, 1694
BstDSI CCRYGG 1 cut(s) 389
BstF5I GGATG 5 cut(s) 770, 1672, 1728, 1840, 1959
BstFNI CGCG 4 cut(s) 87, 95, 130, 1891
BstH2I RGCGCY 1 cut(s) 1752
BstHHI GCGC 3 cut(s) 935, 1751, 1891
BstMAI GTCTC 2 cut(s) 94, 1697
BstMWI GCNNNNNNNGC 5 cut(s) 1083, 1269, 1285, 1748, 1954
BstNI CCWGG 6 cut(s) 492, 1059, 1074, 1229, 1442, 1942
BstNSI RCATGY 3 cut(s) 294, 1042, 1406
BstSCI CCNGG 7 cut(s) 490, 1057, 1072, 1227, 1306, 1440, 1940
BstSFI CTRYAG 1 cut(s) 808
BstSLI GKGCMC 1 cut(s) 781
BstUI CGCG 4 cut(s) 87, 95, 130, 1891
BstV1I GCAGC 6 cut(s) 423, 1683, 1723, 1726, 1738, 1912
BstV2I GAAGAC 3 cut(s) 1326, 1773, 1986
BstX2I RGATCY 3 cut(s) 256, 1437, 1894
BstYI RGATCY 3 cut(s) 256, 1437, 1894
Bsu15I ATCGAT 1 cut(s) 2038
BsuI GTATCC 1 cut(s) 731
BsuRI GGCC 4 cut(s) 336, 612, 916, 1077
BsuTUI ATCGAT 1 cut(s) 2038
BtgI CCRYGG 1 cut(s) 389
BtsCI GGATG 5 cut(s) 770, 1672, 1728, 1840, 1959
BtsI GCAGTG 2 cut(s) 183, 1638
BtsIMutI CAGTG 9 cut(s) 183, 212, 284, 369, 413, 429, 1518, 1638, 1687
Cac8I GCNNGC 2 cut(s) 914, 1851
CaiI CAGNNNCTG 2 cut(s) 982, 1275
CciI TCATGA 2 cut(s) 1141, 1282
CfoI GCGC 3 cut(s) 935, 1751, 1891
Cfr13I GGNCC 2 cut(s) 335, 901
ClaI ATCGAT 1 cut(s) 2038
CseI GACGC 3 cut(s) 76, 84, 613
Csp6I GTAC 5 cut(s) 999, 1047, 1221, 1448, 1476
CviQI GTAC 5 cut(s) 999, 1047, 1221, 1448, 1476
DdeI CTNAG 7 cut(s) 102, 449, 515, 590, 794, 1148, 1694
DraI TTTAAA 1 cut(s) 585
Eam1104I CTCTTC 3 cut(s) 139, 1108, 1620
EarI CTCTTC 3 cut(s) 139, 1108, 1620
Eco31I GGTCTC 1 cut(s) 1697
Eco47I GGWCC 1 cut(s) 901
Eco47III AGCGCT 1 cut(s) 1750
EcoRII CCWGG 6 cut(s) 490, 1057, 1072, 1227, 1440, 1940
Esp3I CGTCTC 1 cut(s) 94
FalI AAGNNNNNCTT 2 cut(s) 1198, 1230
FaqI GGGAC 2 cut(s) 296, 993
FauI CCCGC 1 cut(s) 1884
FbaI TGATCA 1 cut(s) 1977
Fnu4HI GCNGC 7 cut(s) 412, 1672, 1722, 1737, 1740, 1752, 1926
FokI GGATG 5 cut(s) 757, 1679, 1715, 1847, 1966
Fsp4HI GCNGC 7 cut(s) 412, 1672, 1722, 1737, 1740, 1752, 1926
FspBI CTAG 4 cut(s) 561, 644, 815, 1778
FspI TGCGCA 1 cut(s) 934
GlaI GCGC 3 cut(s) 934, 1750, 1890
GluI GCNGC 7 cut(s) 412, 1672, 1722, 1737, 1740, 1752, 1926
HaeII RGCGCY 1 cut(s) 1752
HaeIII GGCC 4 cut(s) 336, 612, 916, 1077
HapII CCGG 2 cut(s) 724, 1307
HgaI GACGC 3 cut(s) 76, 84, 613
HhaI GCGC 3 cut(s) 935, 1751, 1891
Hin6I GCGC 3 cut(s) 933, 1749, 1889
HinP1I GCGC 3 cut(s) 933, 1749, 1889
HincII GTYRAC 2 cut(s) 1335, 1536
HindII GTYRAC 2 cut(s) 1335, 1536
HindIII AAGCTT 2 cut(s) 1847, 1946
HinfI GANTC 7 cut(s) 19, 122, 678, 1152, 1354, 1586, 1769
HpaI GTTAAC 2 cut(s) 1335, 1536
HpaII CCGG 2 cut(s) 724, 1307
HphI GGTGA 2 cut(s) 117, 1649
Hpy166II GTNNAC 3 cut(s) 1335, 1476, 1536
Hpy188III TCNNGA 8 cut(s) 68, 260, 299, 377, 644, 1142, 1283, 1778
Hpy8I GTNNAC 3 cut(s) 1335, 1476, 1536
Hpy99I CGWCG 1 cut(s) 1268
HpyAV CCTTC 8 cut(s) 160, 228, 261, 576, 1143, 1457, 1699, 1903
HpyCH4III ACNGT 7 cut(s) 424, 668, 1301, 1594, 1682, 1801, 1886
HpyF10VI GCNNNNNNNGC 5 cut(s) 1083, 1269, 1285, 1748, 1954
HpyF3I CTNAG 7 cut(s) 102, 449, 515, 590, 794, 1148, 1694
HspAI GCGC 3 cut(s) 933, 1749, 1889
Ksp22I TGATCA 1 cut(s) 1977
KspAI GTTAAC 2 cut(s) 1335, 1536
LguI GCTCTTC 1 cut(s) 1108
Lsp1109I GCAGC 6 cut(s) 423, 1683, 1723, 1726, 1738, 1912
LweI GCATC 6 cut(s) 454, 529, 853, 1288, 1661, 1944
MaeI CTAG 4 cut(s) 561, 644, 815, 1778
MaeIII GTNAC 4 cut(s) 123, 947, 1801, 1877
MbiI CCGCTC 1 cut(s) 1139
MfeI CAATTG 1 cut(s) 619
MflI RGATCY 3 cut(s) 256, 1437, 1894
MhlI GDGCHC 3 cut(s) 781, 1713, 1917
MlyI GAGTC 2 cut(s) 131, 1763
MseI TTAA 7 cut(s) 509, 584, 1164, 1334, 1535, 1970, 1989
MslI CAYNNNNRTG 2 cut(s) 966, 990
MspI CCGG 2 cut(s) 724, 1307
MspR9I CCNGG 7 cut(s) 492, 1059, 1074, 1229, 1308, 1442, 1942
MunI CAATTG 1 cut(s) 619
Mva1269I GAATGC 1 cut(s) 914
MvaI CCWGG 6 cut(s) 492, 1059, 1074, 1229, 1442, 1942
MvnI CGCG 4 cut(s) 87, 95, 130, 1891
MwoI GCNNNNNNNGC 5 cut(s) 1083, 1269, 1285, 1748, 1954
NciI CCSGG 1 cut(s) 1308
NlaIV GGNNCC 4 cut(s) 273, 1071, 1439, 1896
NmuCI GTSAC 2 cut(s) 123, 1801
NsbI TGCGCA 1 cut(s) 934
NspI RCATGY 3 cut(s) 294, 1042, 1406
NspV TTCGAA 1 cut(s) 75
PagI TCATGA 2 cut(s) 1141, 1282
PciI ACATGT 1 cut(s) 1038
PciSI GCTCTTC 1 cut(s) 1108
PctI GAATGC 1 cut(s) 914
PfeI GAWTC 5 cut(s) 19, 678, 1152, 1354, 1586
PflMI CCANNNNNTGG 2 cut(s) 608, 1905
PkrI GCNGC 7 cut(s) 413, 1673, 1723, 1738, 1741, 1753, 1927
PleI GAGTC 2 cut(s) 130, 1763
PpsI GAGTC 2 cut(s) 130, 1763
PscI ACATGT 1 cut(s) 1038
Psp6I CCWGG 6 cut(s) 490, 1057, 1072, 1227, 1440, 1940
PspGI CCWGG 6 cut(s) 490, 1057, 1072, 1227, 1440, 1940
PspN4I GGNNCC 4 cut(s) 273, 1071, 1439, 1896
PspPI GGNCC 2 cut(s) 335, 901
PstNI CAGNNNCTG 2 cut(s) 982, 1275
PsuI RGATCY 3 cut(s) 256, 1437, 1894
RsaI GTAC 5 cut(s) 1000, 1048, 1222, 1449, 1477
RsaNI GTAC 5 cut(s) 999, 1047, 1221, 1448, 1476
RseI CAYNNNNRTG 2 cut(s) 966, 990
SapI GCTCTTC 1 cut(s) 1108
SaqAI TTAA 7 cut(s) 509, 584, 1164, 1334, 1535, 1970, 1989
SatI GCNGC 7 cut(s) 412, 1672, 1722, 1737, 1740, 1752, 1926
Sau96I GGNCC 2 cut(s) 335, 901
SchI GAGTC 2 cut(s) 131, 1763
ScrFI CCNGG 7 cut(s) 492, 1059, 1074, 1229, 1308, 1442, 1942
SduI GDGCHC 3 cut(s) 781, 1713, 1917
SfaNI GCATC 6 cut(s) 454, 529, 853, 1288, 1661, 1944
SfcI CTRYAG 1 cut(s) 808
SfuI TTCGAA 1 cut(s) 75
SinI GGWCC 1 cut(s) 901
SmiMI CAYNNNNRTG 2 cut(s) 966, 990
SmlI CTYRAG 1 cut(s) 889
SmoI CTYRAG 1 cut(s) 889
SsiI CCGC 6 cut(s) 85, 93, 128, 1137, 1722, 1891
SspMI CTAG 4 cut(s) 561, 644, 815, 1778
StyD4I CCNGG 7 cut(s) 490, 1057, 1072, 1227, 1306, 1440, 1940
TaaI ACNGT 7 cut(s) 424, 668, 1301, 1594, 1682, 1801, 1886
TaqI TCGA 3 cut(s) 75, 676, 2038
TatI WGTACW 4 cut(s) 998, 1046, 1220, 1447
TauI GCSGC 1 cut(s) 1724
TfiI GAWTC 5 cut(s) 19, 678, 1152, 1354, 1586
Tru1I TTAA 7 cut(s) 509, 584, 1164, 1334, 1535, 1970, 1989
Tru9I TTAA 7 cut(s) 509, 584, 1164, 1334, 1535, 1970, 1989
TscAI CASTG 9 cut(s) 190, 212, 284, 376, 413, 429, 1525, 1638, 1687
TseFI GTSAC 2 cut(s) 123, 1801
TseI GCWGC 6 cut(s) 411, 1671, 1736, 1739, 1751, 1925
Tsp45I GTSAC 2 cut(s) 123, 1801
TspRI CASTG 9 cut(s) 190, 212, 284, 376, 413, 429, 1525, 1638, 1687
Van91I CCANNNNNTGG 2 cut(s) 608, 1905
VpaK11BI GGWCC 1 cut(s) 901
XapI RAATTY 3 cut(s) 226, 1786, 2021
XbaI TCTAGA 2 cut(s) 643, 1777
XceI RCATGY 3 cut(s) 294, 1042, 1406
XspI CTAG 4 cut(s) 561, 644, 815, 1778
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.