RLG00000028773

TMV resistance protein N-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
OG0000036
Physical Location & Seq
Reverse (-)
27762255 .. 27765221
2967 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000028773

Sequence Viewer

Length: 2175 bp
ATGCAAAGGCAACTTGGAGTCACTACTCCTTCAATATATTTGAATGAGATCATCTTAGAAACCAATGCATTTGCAAGGATGCACAAACTAAGACTACTCCGGCTTAGTCATGTAAAACTCACCGGCTGCTACGAAGAAATTCCTACAGGATTGAGAATGTTATGTTGGATTGCATTTCCTCTGGATGCTATACCAATTGATTTTCATTTGGAGAACCTAGTTGTTCTGGAAATGCAGTATAGCAGCTTGAGACAAATCTTGGATGGAACAAAGTGTTTTCCATCCTTGAAGATCCTTGATCTCAGCCATTCTCATGGCCTTATTGCAACTGTTGACTTCTCTCTTTGTCCCAATCTAGACAAACTGATTCTTATCGATTGTGAAGGCTTGATTGACGTCCATGAATCCATTGGAAACCTAGAAAGACTTGTTTATTTGAATATGAAAGACTGCAAAAGTCTTAGGAGGCTCCCAAAGACCATTGGTATGCTAAAGCTACTTGACACACTTATTATATCCGGTTGTTCAAATCTTGATAACTCTTCAATAGAGGTAATTAAGAGCATGGAGTCTCTGAAAGTGCTTGAATTGGATAGAATTCCAATGAGTCAGTTATTCACTCCCCACAGGGAGGCCAAATCAGGGACTTATTTACCATGCTCTTTATTATCTTTGAGTCTTAGTGGGTGCAATCTTTCAGATGATGCTTTTCCTGTGGATTTTTCTAGCCTATCCTTATTGAGAAGTTTAAATCTAAGTGAGAATCCAATTTCTGGCCTACCAAATTGCATCAAGGGTATGACAAGCCTAGAAGTGCTCTCTTTTTACAATTGTTTGAGGCTTGAATCCCTTCTAGAGCTACCAAAAGTACGCAACGAGTTGAATGTGTCAGGTTGCGAAGCATTGGTAAAAATAACATATCAGTCAAATTCTTATGCCCAATTTCCACGCCGAAGTGGTAAGAATCACAGCCTATGTGAGTGGGAATACGAATACAAGTTAGAACCTATTGGGAGAGTTGATGTAGAAATGCTCAACCTTTTGGGCTTGAGCAAATTGGACTTCGAATTTATGCCAAATGTTCGGATGTGCAAACCATATCAAGGTTACGACATACTCCATCAGGGTGGTATCCAGGGACTGCATGAGTATGATTGTACAGACTCATATTTTCGAGGAAATGCAAGAAAGATAAATATGTGCAGCACATTTCTTCCTGGAAACGCTGTTCCAGGCCAATTCAGCCATAGAACCAAAGGCTCCTCCTCAATATCATTAACCTTGCCTTTGCCTTCACGTCCCCATATCAGAATCCGAGGCTTTAACACCTTCATTGTCTATGCAATTTCTGATAACGACGATGAAAGATATTCTTCTAGTAGTGACCAGGGTTCAATAACTATCAAAATCATAAATGAGAGCAATGACGACAACTGGCATTATGCCCCAATATATCACGGTATTCCAGGTAAGGGAGAAGACATGATATGGTTAACCCATTGGAATATGGAGAATCAAGTAAAAGGTGGGGATCAAGTGGCTGTTTCACTCTCCGTAAACCATGCAAGGTTTAGGTACCAGGTAAAGGAGTGGGGGATCCAGATTGTACAGGAGCAAGAAGATAAGTTGTGTACCGACCACTGCACCACAAATCCCATTTGTTTTCCATGTGCCACTTGTGGAGATTTGTTAACATCTGATGAGCCGTTGAGGGGAACGTACTTGCTGTCCTATGAACCTCATTCAACGGTAGATAAAGATAAAAAAGAAGATGATGAAGAAGAGGCAGTGGGTGATCCTATTCCTGCATCAGCAACTGGGGATGGCAGTAACAACAGCGATCGGGGTCTCAGAAAGTGGAAGGTGCTAATCATTGCCGCTATCATCCTTGCCGCTGCCATCAGTGTTGCACATCGTTTTGAGGCCTCTGATCTAGACACAAATCTAGCTGAAACTGTCACTAATGCAGACAATAAAGAAGAACAACGAGATGAAGATGACAAGCTTGCCGCAGCGACCAATACTGACGGCAGTAACAACCGTGCGCGGGATCCCAGAAAATGGAAGGTGCTCATCATTGCTGCTGTCATGTTAATTCTCTGTTTATCTTTTCCCTGGTTCTTCTTTTTCTCCTCCAGAGACAGATACATGGAGTCCATTTTGGTTCCTACATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_8 NB-ARC TIR

Protein Analysis

725

Amino Acids

81.48

Weight (kDa)

5.43

Isoelectric Point (pI)

31.89

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000036)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G57630 AT1G72930 AT5G38344
fragaria_vesca FvH4_1g27020 FvH4_2g00931 FvH4_2g17330 FvH4_2g17330 FvH4_2g17340 FvH4_2g17350 FvH4_2g20690 FvH4_5g15301 FvH4_5g34194 FvH4_5g38530 FvH4_5g38740 FvH4_5g38740 FvH4_5g38740 FvH4_6g03800 FvH4_7g09791 FvH4_7g09800 FvH4_7g09800 FvH4_7g10510 FvH4_7g10520 FvH4_7g10520 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750
malus_domestica MD02G1217100.v1.1 MD02G1217200.v1.1 MD02G1217400.v1.1 MD02G1217600.v1.1 MD02G1264800.v1.1 MD02G1264900.v1.1 MD02G1302100.v1.1 MD04G1010700.v1.1 MD05G1006800.v1.1 MD05G1140100.v1.1 MD05G1140200.v1.1 MD05G1152200.v1.1 MD07G1073500.v1.1 MD07G1101700.v1.1 MD07G1102200.v1.1 MD07G1103200.v1.1 MD07G1112300.v1.1 MD08G1018200.v1.1 MD08G1018400.v1.1 MD08G1018800.v1.1 MD08G1019000.v1.1 MD08G1019100.v1.1 MD08G1019200.v1.1 MD08G1019300.v1.1 MD08G1019400.v1.1 MD08G1019600.v1.1 MD08G1019900.v1.1 MD08G1020000.v1.1 MD08G1020200.v1.1 MD08G1020500.v1.1 MD08G1020700.v1.1 MD08G1020800.v1.1 MD08G1040700.v1.1 MD11G1112400.v1.1 MD12G1068600.v1.1 MD12G1193200.v1.1 MD13G1050600.v1.1 MD15G1374900.v1.1 MD15G1375100.v1.1 MD15G1416500.v1.1 MD17G1072500.v1.1 MD17G1274200.v1.1 MD17G1274900.v1.1
prunus_persica Prupe.2G121000_v2.0.a1 Prupe.2G121000_v2.0.a1 Prupe.2G125800_v2.0.a1 Prupe.2G126000_v2.0.a1 Prupe.2G126100_v2.0.a1 Prupe.2G126200_v2.0.a1 Prupe.2G126300_v2.0.a1 Prupe.2G126400_v2.0.a1 Prupe.2G126500_v2.0.a1 Prupe.2G126600_v2.0.a1 Prupe.2G126700_v2.0.a1 Prupe.2G126700_v2.0.a1 Prupe.2G126800_v2.0.a1 Prupe.2G126900_v2.0.a1 Prupe.2G127000_v2.0.a1 Prupe.2G127000_v2.0.a1 Prupe.2G127000_v2.0.a1 Prupe.2G127000_v2.0.a1 Prupe.2G135500_v2.0.a1 Prupe.2G135600_v2.0.a1 Prupe.2G135700_v2.0.a1 Prupe.2G135700_v2.0.a1 Prupe.3G009800_v2.0.a1 Prupe.3G010200_v2.0.a1 Prupe.3G131000_v2.0.a1 Prupe.4G260800_v2.0.a1 Prupe.4G260900_v2.0.a1 Prupe.6G083100_v2.0.a1 Prupe.6G083200_v2.0.a1 Prupe.6G083400_v2.0.a1 Prupe.6G132100_v2.0.a1 Prupe.8G184900_v2.0.a1 Prupe.8G185200_v2.0.a1 Prupe.8G185300_v2.0.a1
pyrus_communis pycom02g17870 pycom02g17880 pycom02g19520 pycom02g22610 pycom02g22630 pycom02g22680 pycom05g13540 pycom05g14680 pycom07g04880 pycom07g04890 pycom07g05690 pycom07g05710 pycom07g05720 pycom07g05750 pycom07g05780 pycom07g06300 pycom07g08320 pycom07g08330 pycom07g08350 pycom07g08360 pycom07g08370 pycom07g08410 pycom07g08420 pycom07g08430 pycom07g08440 pycom07g08470 pycom07g08480 pycom07g08520 pycom07g08550 pycom07g08560 pycom07g08640 pycom07g08660 pycom07g08670 pycom07g08680 pycom07g08690 pycom07g08720 pycom07g08730 pycom07g08790 pycom07g08800 pycom07g08810 pycom07g08860 pycom07g08890 pycom07g09720 pycom08g01590 pycom08g01600 pycom08g01620 pycom08g01630 pycom08g01640 pycom10g12630 pycom15g16490 pycom17g07200 pycom17g07210 pycom17g07220 pycom17g11730 pycom17g11740 pycom17g27340 pycom17g27380
rosa_chinensis RchiOBHm_Chr1g0342571 RchiOBHm_Chr1g0346231 RchiOBHm_Chr1g0346831 RchiOBHm_Chr1g0346891 RchiOBHm_Chr1g0348311 RchiOBHm_Chr1g0348321 RchiOBHm_Chr1g0348331 RchiOBHm_Chr1g0348361 RchiOBHm_Chr1g0348371 RchiOBHm_Chr1g0348381 RchiOBHm_Chr1g0348401 RchiOBHm_Chr1g0348411 RchiOBHm_Chr1g0348421 RchiOBHm_Chr1g0348431 RchiOBHm_Chr2g0130881 RchiOBHm_Chr3g0487331 RchiOBHm_Chr5g0060371 RchiOBHm_Chr6g0246491 RchiOBHm_Chr6g0246871 RchiOBHm_Chr6g0250311 RchiOBHm_Chr6g0250781 RchiOBHm_Chr6g0251431 RchiOBHm_Chr6g0281871 RchiOBHm_Chr6g0281881 RchiOBHm_Chr6g0281931 RchiOBHm_Chr6g0281941 RchiOBHm_Chr6g0281951 RchiOBHm_Chr6g0281971 RchiOBHm_Chr6g0281981 RchiOBHm_Chr7g0240541 RchiOBHm_Chr7g0240631 RchiOBHm_Chr7g0240671
rosa_laevigata RLG00000000627 RLG00000000631 RLG00000000641 RLG00000000645 RLG00000000652 RLG00000000662 RLG00000000663 RLG00000000667 RLG00000000670 RLG00000000702 RLG00000001216 RLG00000001219 RLG00000007678 RLG00000012923 RLG00000012996 RLG00000013243 RLG00000017513 RLG00000017514 RLG00000020936 RLG00000022755 RLG00000023013 RLG00000028646 RLG00000028654 RLG00000028662 RLG00000028665 RLG00000028667 RLG00000028711 RLG00000028714 RLG00000028716 RLG00000028770 RLG00000028771 RLG00000028773 RLG00000028778 RLG00000028798 RLG00000028809 RLG00000028813 RLG00000029334 RLG00000030003 RLG00000033910 RLG00000034358 RLG00000035430
rosa_multiflora Rmu_co8031134.1_g000001 Rmu_co8092796.1_g000001 Rmu_co8130156.1_g000001 Rmu_co8325323.1_g000001 Rmu_co8424083.1_g000002 Rmu_sc0000008.1_g000003 Rmu_sc0000008.1_g000011 Rmu_sc0000008.1_g000015 Rmu_sc0000008.1_g000020 Rmu_sc0000091.1_g000015 Rmu_sc0000091.1_g000018 Rmu_sc0000091.1_g000029 Rmu_sc0000091.1_g000031 Rmu_sc0000391.1_g000004 Rmu_sc0001070.1_g000030 Rmu_sc0001293.1_g000016 Rmu_sc0001674.1_g000006 Rmu_sc0001731.1_g000002 Rmu_sc0001731.1_g000003 Rmu_sc0001731.1_g000005 Rmu_sc0001911.1_g000029 Rmu_sc0001913.1_g000038 Rmu_sc0001955.1_g000025 Rmu_sc0001992.1_g000022 Rmu_sc0001992.1_g000028 Rmu_sc0001992.1_g000031 Rmu_sc0002517.1_g000013 Rmu_sc0002517.1_g000017 Rmu_sc0002551.1_g000022 Rmu_sc0002551.1_g000029 Rmu_sc0002551.1_g000038 Rmu_sc0002705.1_g000015 Rmu_sc0002705.1_g000016 Rmu_sc0002882.1_g000055 Rmu_sc0003232.1_g000027 Rmu_sc0003363.1_g000037 Rmu_sc0003600.1_g000054 Rmu_sc0003918.1_g000011 Rmu_sc0004395.1_g000011 Rmu_sc0005071.1_g000004 Rmu_sc0005255.1_g000018 Rmu_sc0005327.1_g000004 Rmu_sc0005597.1_g000007 Rmu_sc0007060.1_g000007 Rmu_sc0007310.1_g000003 Rmu_sc0007383.1_g000014 Rmu_sc0007799.1_g000003 Rmu_sc0008477.1_g000016 Rmu_sc0010151.1_g000009 Rmu_sc0011217.1_g000005 Rmu_sc0016269.1_g000006 Rmu_sc0021495.1_g000001 Rmu_sc0027364.1_g000001 Rmu_sc0029432.1_g000001 Rmu_sc0041386.1_g000001 Rmu_ssc0000126.1_g000023 Rmu_ssc0000126.1_g000027
rosa_roxburghii Rroxscaffold_1G00006130 Rroxscaffold_1G00023320 Rroxscaffold_1G00038770 Rroxscaffold_2G00119800 Rroxscaffold_2G00121860 Rroxscaffold_3G00219780 Rroxscaffold_3G00219890 Rroxscaffold_4G00306740 Rroxscaffold_4G00306820 Rroxscaffold_4G00307000 Rroxscaffold_4G00307010 Rroxscaffold_4G00307020 Rroxscaffold_4G00308030 Rroxscaffold_4G00308070 Rroxscaffold_4G00308450 Rroxscaffold_4G00308460 Rroxscaffold_4G00315320 Rroxscaffold_5G00352470 Rroxscaffold_5G00371420 Rroxscaffold_6G00392300 Rroxscaffold_6G00394870 Rroxscaffold_6G00394890 Rroxscaffold_7G00186700 Rroxscaffold_7G00194980 Rroxscaffold_7G00216840
rosa_rugosa Rorug01G0076100 Rorug01G0128100 Rorug01G0149000.1 Rorug01G0149500.1 Rorug01G0180000 Rorug01G0180100 Rorug01G0182900 Rorug01G0184000 Rorug01G0184100 Rorug01G0184300 Rorug01G0184600 Rorug01G0184700 Rorug01G0184700 Rorug01G0184900 Rorug01G0185000 Rorug01G0185100 Rorug01G0189300 Rorug01G0194100 Rorug01G0194100 Rorug01G0194200 Rorug01G0194400 Rorug01G0194400 Rorug01G0194500 Rorug02G0090400 Rorug02G0090400 Rorug03G0233000 Rorug03G0233100 Rorug05G0178600 Rorug05G0178700 Rorug05G0579200 Rorug06G0144100 Rorug06G0144300 Rorug06G0144300 Rorug06G0179300 Rorug06G0208800 Rorug07G0323500 Rorug07G0337000
rosa_samantha Rh1AG046100 Rh1AG201400 Rh1AG201800 Rh1AG202100 Rh1AG202600 Rh1AG211500 Rh1AG211800 Rh1AG212200 Rh1AG212500 Rh1AG212600 Rh1AG214200 Rh1BG168000 Rh1BG168300 Rh1BG168500 Rh1BG177900 Rh1BG178200 Rh1BG178300 Rh1BG178800 Rh1BG178900 Rh1CG080900 Rh1CG183300 Rh1CG186300 Rh1CG186700 Rh1CG187000 Rh1CG187300 Rh1CG193400 Rh1CG195800 Rh1CG196000 Rh1CG196100 Rh1CG196400 Rh1CG196500 Rh1CG196800 Rh1CG198800 Rh1CG442600 Rh1DG086200 Rh1DG155400 Rh1DG156200 Rh1DG194000 Rh1DG194300 Rh1DG194900 Rh1DG197000 Rh1DG198800 Rh1DG199000 Rh1DG199200 Rh1DG202000 Rh1DG203900 Rh1DG207600 Rh1DG207900 Rh1DG208000 Rh1DG208500 Rh1DG208600 Rh1DG208700 Rh3CG339100 Rh5AG106500 Rh5AG264800 Rh5AG265300 Rh5CG302800 Rh5DG277900 Rh6AG257600 Rh6AG257700 Rh6BG260500 Rh6BG260700 Rh6CG259600 Rh6CG259700 Rh6DG252100 Rh7DG126900
rosa_wichuraiana Rw0G005780 Rw0G007540 Rw0G007550 Rw0G007560 Rw0G009390 Rw1G016900 Rw1G016930 Rw1G016940 Rw1G016970 Rw1G017860 Rw1G017890 Rw1G017900 Rw1G017910 Rw1G017920 Rw1G017960 Rw1G017970 Rw1G017980 Rw1G018150 Rw4G000830 Rw5G009290 Rw5G018950 Rw5G024850 Rw5G024870 Rw5G040460 Rw6G022290 Rw7G041020 Rw7G041200 Rw7G041360 Rw7G041450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 399
Acc65I GGTACC 1 cut(s) 1575
AccB1I GGYRCC 1 cut(s) 1575
AccB7I CCANNNNNTGG 2 cut(s) 773, 2061
AccII CGCG 1 cut(s) 2047
AciI CCGC 4 cut(s) 1878, 1893, 2010, 2047
AclWI GGATC 7 cut(s) 286, 1539, 1591, 1604, 1790, 2045, 2058
AcsI RAATTY 4 cut(s) 138, 597, 928, 1067
AcyI GRCGYC 1 cut(s) 396
AfaI GTAC 6 cut(s) 870, 1159, 1577, 1608, 1633, 1721
AfiI CCNNNNNNNGG 9 cut(s) 631, 642, 773, 1103, 1472, 1585, 1712, 2047, 2061
AjiI CACGTC 1 cut(s) 1298
AjnI CCWGG 7 cut(s) 1134, 1216, 1231, 1386, 1465, 1578, 2114
AjuI GAANNNNNNNTTGG 2 cut(s) 148, 180
AloI GAACNNNNNNTCC 2 cut(s) 1212, 1244
AluBI AGCT 5 cut(s) 246, 496, 859, 1949, 2005
AluI AGCT 5 cut(s) 246, 496, 859, 1949, 2005
Alw21I GWGCWC 2 cut(s) 819, 2073
Alw26I GTCTC 4 cut(s) 244, 576, 1853, 2133
AlwI GGATC 7 cut(s) 286, 1539, 1591, 1604, 1790, 2045, 2058
AlwNI CAGNNNCTG 2 cut(s) 1141, 1817
AoxI GGCC 5 cut(s) 316, 633, 775, 1234, 1923
ApeKI GCWGC 6 cut(s) 126, 243, 1203, 1895, 2012, 2081
ApoI RAATTY 4 cut(s) 138, 597, 928, 1067
Asp700I GAANNNNTTC 2 cut(s) 138, 849
Asp718I GGTACC 1 cut(s) 1575
AspLEI GCGC 1 cut(s) 2047
AsuHPI GGTGA 2 cut(s) 112, 1805
AsuII TTCGAA 1 cut(s) 1065
BamHI GGATCC 2 cut(s) 1596, 2050
BanI GGYRCC 1 cut(s) 1575
BbsI GAAGAC 1 cut(s) 1485
Bbv12I GWGCWC 2 cut(s) 819, 2073
BbvI GCAGC 6 cut(s) 113, 255, 1215, 1882, 2024, 2068
BccI CCATC 5 cut(s) 257, 289, 1128, 1817, 1907
BceAI ACGGC 2 cut(s) 1690, 2044
BciT130I CCWGG 7 cut(s) 1136, 1218, 1233, 1388, 1467, 1580, 2116
BciVI GTATCC 1 cut(s) 1142
BcoDI GTCTC 4 cut(s) 244, 576, 1853, 2133
BfaI CTAG 9 cut(s) 218, 356, 419, 726, 809, 854, 1377, 1934, 1946
BfmI CTRYAG 1 cut(s) 144
BfuI GTATCC 1 cut(s) 1142
BisI GCNGC 9 cut(s) 127, 244, 1204, 1878, 1893, 1896, 2010, 2013, 2082
BlsI GCNGC 9 cut(s) 128, 245, 1205, 1879, 1894, 1897, 2011, 2014, 2083
Bme1390I CCNGG 7 cut(s) 1136, 1218, 1233, 1388, 1467, 1580, 2116
BmgBI CACGTC 1 cut(s) 1298
BmiI GGNNCC 6 cut(s) 470, 1261, 1577, 1598, 2052, 2166
BmrFI CCNGG 7 cut(s) 1136, 1218, 1233, 1388, 1467, 1580, 2116
BmrI ACTGGG 1 cut(s) 1827
BmsI GCATC 5 cut(s) 69, 175, 694, 798, 1817
BmuI ACTGGG 1 cut(s) 1827
BpiI GAAGAC 1 cut(s) 1485
BpmI CTGGAG 1 cut(s) 2119
Bpu14I TTCGAA 1 cut(s) 1065
BpuEI CTTGAG 2 cut(s) 268, 1069
Bsa29I ATCGAT 1 cut(s) 375
BsaBI GATNNNNATC 1 cut(s) 371
BsaHI GRCGYC 1 cut(s) 396
BsaI GGTCTC 1 cut(s) 1853
BsaJI CCNNGG 4 cut(s) 1135, 1315, 1387, 2114
BsaWI WCCGGW 1 cut(s) 518
Bsc4I CCNNNNNNNGG 9 cut(s) 631, 642, 773, 1103, 1472, 1585, 1712, 2047, 2061
Bse118I RCCGGY 1 cut(s) 122
Bse1I ACTGG 2 cut(s) 1439, 1822
Bse3DI GCAATG 3 cut(s) 1429, 1872, 2076
Bse8I GATNNNNATC 1 cut(s) 371
BseBI CCWGG 7 cut(s) 1136, 1218, 1233, 1388, 1467, 1580, 2116
BseCI ATCGAT 1 cut(s) 375
BseDI CCNNGG 4 cut(s) 1135, 1315, 1387, 2114
BseGI GGATG 7 cut(s) 84, 190, 268, 281, 1092, 1828, 1884
BseJI GATNNNNATC 1 cut(s) 371
BseLI CCNNNNNNNGG 9 cut(s) 631, 642, 773, 1103, 1472, 1585, 1712, 2047, 2061
BseMI GCAATG 3 cut(s) 1429, 1872, 2076
BseMII CTCAG 2 cut(s) 316, 1864
BseNI ACTGG 2 cut(s) 1439, 1822
BseRI GAGGAG 3 cut(s) 1252, 1255, 2122
BseXI GCAGC 6 cut(s) 113, 255, 1215, 1882, 2024, 2068
BsgI GTGCAG 2 cut(s) 1222, 1627
Bsh1236I CGCG 1 cut(s) 2047
Bsh1285I CGRYCG 1 cut(s) 1843
BshFI GGCC 5 cut(s) 318, 635, 777, 1236, 1925
BshNI GGYRCC 1 cut(s) 1575
BshVI ATCGAT 1 cut(s) 375
BsiEI CGRYCG 1 cut(s) 1843
BsiHKAI GWGCWC 2 cut(s) 819, 2073
BsiSI CCGG 3 cut(s) 100, 123, 519
BslFI GGGAC 4 cut(s) 333, 658, 1152, 1284
BslI CCNNNNNNNGG 9 cut(s) 631, 642, 773, 1103, 1472, 1585, 1712, 2047, 2061
BsmAI GTCTC 4 cut(s) 244, 576, 1853, 2133
BsmFI GGGAC 4 cut(s) 333, 658, 1152, 1284
BsnI GGCC 5 cut(s) 318, 635, 777, 1236, 1925
Bso31I GGTCTC 1 cut(s) 1853
Bsp119I TTCGAA 1 cut(s) 1065
Bsp1286I GDGCHC 2 cut(s) 819, 2073
Bsp1407I TGTACA 2 cut(s) 1157, 1606
Bsp143I GATC 9 cut(s) 48, 291, 298, 1531, 1596, 1795, 1840, 1930, 2050
BspACI CCGC 4 cut(s) 1878, 1893, 2010, 2047
BspANI GGCC 5 cut(s) 318, 635, 777, 1236, 1925
BspCNI CTCAG 2 cut(s) 315, 1863
BspDI ATCGAT 1 cut(s) 375
BspFNI CGCG 1 cut(s) 2047
BspLI GGNNCC 6 cut(s) 470, 1261, 1577, 1598, 2052, 2166
BspPI GGATC 7 cut(s) 286, 1539, 1591, 1604, 1790, 2045, 2058
BspT104I TTCGAA 1 cut(s) 1065
BspT107I GGYRCC 1 cut(s) 1575
BspTNI GGTCTC 1 cut(s) 1853
BsrDI GCAATG 3 cut(s) 1429, 1872, 2076
BsrFI RCCGGY 1 cut(s) 122
BsrGI TGTACA 2 cut(s) 1157, 1606
BsrI ACTGG 2 cut(s) 1439, 1822
BssAI RCCGGY 1 cut(s) 122
BssECI CCNNGG 4 cut(s) 1135, 1315, 1387, 2114
BssMI GATC 9 cut(s) 48, 291, 298, 1531, 1596, 1795, 1840, 1930, 2050
BssNI GRCGYC 1 cut(s) 396
Bst2UI CCWGG 7 cut(s) 1136, 1218, 1233, 1388, 1467, 1580, 2116
Bst4CI ACNGT 5 cut(s) 331, 1460, 1750, 1957, 2042
Bst6I CTCTTC 2 cut(s) 547, 1776
BstACI GRCGYC 1 cut(s) 396
BstAUI TGTACA 2 cut(s) 1157, 1606
BstBI TTCGAA 1 cut(s) 1065
BstC8I GCNNGC 1 cut(s) 2007
BstDEI CTNAG 8 cut(s) 55, 89, 104, 302, 461, 680, 755, 1850
BstF5I GGATG 7 cut(s) 84, 190, 268, 281, 1092, 1828, 1884
BstFNI CGCG 1 cut(s) 2047
BstHHI GCGC 1 cut(s) 2047
BstKTI GATC 9 cut(s) 51, 294, 301, 1534, 1599, 1798, 1843, 1933, 2053
BstMAI GTCTC 4 cut(s) 244, 576, 1853, 2133
BstMBI GATC 9 cut(s) 48, 291, 298, 1531, 1596, 1795, 1840, 1930, 2050
BstMCI CGRYCG 1 cut(s) 1843
BstMWI GCNNNNNNNGC 1 cut(s) 1242
BstNI CCWGG 7 cut(s) 1136, 1218, 1233, 1388, 1467, 1580, 2116
BstSCI CCNGG 7 cut(s) 1134, 1216, 1231, 1386, 1465, 1578, 2114
BstSFI CTRYAG 1 cut(s) 144
BstUI CGCG 1 cut(s) 2047
BstV1I GCAGC 6 cut(s) 113, 255, 1215, 1882, 2024, 2068
BstV2I GAAGAC 1 cut(s) 1485
BstX2I RGATCY 3 cut(s) 291, 1596, 2050
BstXI CCANNNNNNTGG 2 cut(s) 314, 1127
BstYI RGATCY 3 cut(s) 291, 1596, 2050
Bsu15I ATCGAT 1 cut(s) 375
BsuI GTATCC 1 cut(s) 1142
BsuRI GGCC 5 cut(s) 318, 635, 777, 1236, 1925
BsuTUI ATCGAT 1 cut(s) 375
BtrI CACGTC 1 cut(s) 1298
BtsCI GGATG 7 cut(s) 84, 190, 268, 281, 1092, 1828, 1884
BtsI GCAGTG 2 cut(s) 1639, 1794
BtsIMutI CAGTG 3 cut(s) 1639, 1794, 1909
Cac8I GCNNGC 1 cut(s) 2007
CaiI CAGNNNCTG 2 cut(s) 1141, 1817
CfoI GCGC 1 cut(s) 2047
Cfr10I RCCGGY 1 cut(s) 122
ClaI ATCGAT 1 cut(s) 375
CsiI ACCWGGT 1 cut(s) 1578
Csp6I GTAC 6 cut(s) 869, 1158, 1576, 1607, 1632, 1720
CviQI GTAC 6 cut(s) 869, 1158, 1576, 1607, 1632, 1720
DdeI CTNAG 8 cut(s) 55, 89, 104, 302, 461, 680, 755, 1850
DpnI GATC 9 cut(s) 50, 293, 300, 1533, 1598, 1797, 1842, 1932, 2052
DpnII GATC 9 cut(s) 48, 291, 298, 1531, 1596, 1795, 1840, 1930, 2050
DraI TTTAAA 1 cut(s) 750
Eam1104I CTCTTC 2 cut(s) 547, 1776
EarI CTCTTC 2 cut(s) 547, 1776
Eco147I AGGCCT 1 cut(s) 1925
Eco31I GGTCTC 1 cut(s) 1853
EcoRI GAATTC 1 cut(s) 597
EcoRII CCWGG 7 cut(s) 1134, 1216, 1231, 1386, 1465, 1578, 2114
EcoT22I ATGCAT 1 cut(s) 70
FalI AAGNNNNNCTT 2 cut(s) 1357, 1389
FaqI GGGAC 4 cut(s) 333, 658, 1152, 1284
FauI CCCGC 1 cut(s) 2040
Fnu4HI GCNGC 9 cut(s) 127, 244, 1204, 1878, 1893, 1896, 2010, 2013, 2082
FokI GGATG 7 cut(s) 91, 197, 268, 275, 1099, 1835, 1871
Fsp4HI GCNGC 9 cut(s) 127, 244, 1204, 1878, 1893, 1896, 2010, 2013, 2082
FspBI CTAG 9 cut(s) 218, 356, 419, 726, 809, 854, 1377, 1934, 1946
GlaI GCGC 1 cut(s) 2046
GluI GCNGC 9 cut(s) 127, 244, 1204, 1878, 1893, 1896, 2010, 2013, 2082
GsuI CTGGAG 1 cut(s) 2119
HaeIII GGCC 5 cut(s) 318, 635, 777, 1236, 1925
HapII CCGG 3 cut(s) 100, 123, 519
HhaI GCGC 1 cut(s) 2047
Hin1I GRCGYC 1 cut(s) 396
Hin6I GCGC 1 cut(s) 2045
HinP1I GCGC 1 cut(s) 2045
HincII GTYRAC 3 cut(s) 334, 1494, 1692
HindII GTYRAC 3 cut(s) 334, 1494, 1692
HindIII AAGCTT 1 cut(s) 2003
HpaI GTTAAC 2 cut(s) 1494, 1692
HpaII CCGG 3 cut(s) 100, 123, 519
HphI GGTGA 2 cut(s) 112, 1805
Hpy166II GTNNAC 5 cut(s) 334, 1494, 1558, 1632, 1692
Hpy188I TCNGA 9 cut(s) 576, 700, 1086, 1310, 1316, 1351, 1699, 1853, 1930
Hpy188III TCNNGA 8 cut(s) 182, 227, 356, 533, 854, 1600, 1934, 2136
Hpy8I GTNNAC 5 cut(s) 334, 1494, 1558, 1632, 1692
Hpy99I CGWCG 1 cut(s) 1361
HpyAV CCTTC 7 cut(s) 39, 377, 860, 1302, 1339, 1855, 2059
HpyCH4III ACNGT 5 cut(s) 331, 1460, 1750, 1957, 2042
HpyCH4IV ACGT 3 cut(s) 396, 1297, 1718
HpyF10VI GCNNNNNNNGC 1 cut(s) 1242
HpyF3I CTNAG 8 cut(s) 55, 89, 104, 302, 461, 680, 755, 1850
HpySE526I ACGT 3 cut(s) 396, 1297, 1718
Hsp92I GRCGYC 1 cut(s) 396
HspAI GCGC 1 cut(s) 2045
KpnI GGTACC 1 cut(s) 1579
KspAI GTTAAC 2 cut(s) 1494, 1692
Kzo9I GATC 9 cut(s) 48, 291, 298, 1531, 1596, 1795, 1840, 1930, 2050
LmnI GCTCC 3 cut(s) 474, 1265, 1612
Lsp1109I GCAGC 6 cut(s) 113, 255, 1215, 1882, 2024, 2068
LweI GCATC 5 cut(s) 69, 175, 694, 798, 1817
MabI ACCWGGT 1 cut(s) 1578
MaeI CTAG 9 cut(s) 218, 356, 419, 726, 809, 854, 1377, 1934, 1946
MaeII ACGT 3 cut(s) 396, 1297, 1718
MaeIII GTNAC 6 cut(s) 19, 1106, 1382, 1829, 1957, 2033
MalI GATC 9 cut(s) 50, 293, 300, 1533, 1598, 1797, 1842, 1932, 2052
MboI GATC 9 cut(s) 48, 291, 298, 1531, 1596, 1795, 1840, 1930, 2050
MfeI CAATTG 2 cut(s) 195, 829
MflI RGATCY 3 cut(s) 291, 1596, 2050
MhlI GDGCHC 2 cut(s) 819, 2073
MlyI GAGTC 6 cut(s) 27, 578, 616, 685, 1157, 2162
MmeI TCCRAC 1 cut(s) 146
Mph1103I ATGCAT 1 cut(s) 70
MroXI GAANNNNTTC 2 cut(s) 138, 849
MseI TTAA 7 cut(s) 558, 749, 1277, 1323, 1493, 1691, 2093
MslI CAYNNNNRTG 4 cut(s) 312, 485, 1125, 1149
MspA1I CMGCKG 1 cut(s) 1895
MspI CCGG 3 cut(s) 100, 123, 519
MspR9I CCNGG 7 cut(s) 1136, 1218, 1233, 1388, 1467, 1580, 2116
MunI CAATTG 2 cut(s) 195, 829
MvaI CCWGG 7 cut(s) 1136, 1218, 1233, 1388, 1467, 1580, 2116
MvnI CGCG 1 cut(s) 2047
MwoI GCNNNNNNNGC 1 cut(s) 1242
NdeII GATC 9 cut(s) 48, 291, 298, 1531, 1596, 1795, 1840, 1930, 2050
NlaIV GGNNCC 6 cut(s) 470, 1261, 1577, 1598, 2052, 2166
NmuCI GTSAC 3 cut(s) 19, 1382, 1957
NsiI ATGCAT 1 cut(s) 70
NspV TTCGAA 1 cut(s) 1065
PceI AGGCCT 1 cut(s) 1925
PdmI GAANNNNTTC 2 cut(s) 138, 849
PfeI GAWTC 7 cut(s) 367, 404, 763, 845, 964, 1311, 1513
PflMI CCANNNNNTGG 2 cut(s) 773, 2061
PfoI TCCNGGA 1 cut(s) 1216
PkrI GCNGC 9 cut(s) 128, 245, 1205, 1879, 1894, 1897, 2011, 2014, 2083
Ple19I CGATCG 1 cut(s) 1843
PleI GAGTC 6 cut(s) 26, 577, 615, 684, 1157, 2161
PpsI GAGTC 6 cut(s) 26, 577, 615, 684, 1157, 2161
Psp6I CCWGG 7 cut(s) 1134, 1216, 1231, 1386, 1465, 1578, 2114
PspGI CCWGG 7 cut(s) 1134, 1216, 1231, 1386, 1465, 1578, 2114
PspN4I GGNNCC 6 cut(s) 470, 1261, 1577, 1598, 2052, 2166
PstNI CAGNNNCTG 2 cut(s) 1141, 1817
PsuI RGATCY 3 cut(s) 291, 1596, 2050
PvuI CGATCG 1 cut(s) 1843
RsaI GTAC 6 cut(s) 870, 1159, 1577, 1608, 1633, 1721
RsaNI GTAC 6 cut(s) 869, 1158, 1576, 1607, 1632, 1720
RseI CAYNNNNRTG 4 cut(s) 312, 485, 1125, 1149
SaqAI TTAA 7 cut(s) 558, 749, 1277, 1323, 1493, 1691, 2093
SatI GCNGC 9 cut(s) 127, 244, 1204, 1878, 1893, 1896, 2010, 2013, 2082
Sau3AI GATC 9 cut(s) 48, 291, 298, 1531, 1596, 1795, 1840, 1930, 2050
SchI GAGTC 6 cut(s) 27, 578, 616, 685, 1157, 2162
ScrFI CCNGG 7 cut(s) 1136, 1218, 1233, 1388, 1467, 1580, 2116
SduI GDGCHC 2 cut(s) 819, 2073
SexAI ACCWGGT 1 cut(s) 1578
SfaNI GCATC 5 cut(s) 69, 175, 694, 798, 1817
SfcI CTRYAG 1 cut(s) 144
SfuI TTCGAA 1 cut(s) 1065
SmiMI CAYNNNNRTG 4 cut(s) 312, 485, 1125, 1149
SmlI CTYRAG 2 cut(s) 247, 1048
SmoI CTYRAG 2 cut(s) 247, 1048
SseBI AGGCCT 1 cut(s) 1925
SsiI CCGC 4 cut(s) 1878, 1893, 2010, 2047
SspMI CTAG 9 cut(s) 218, 356, 419, 726, 809, 854, 1377, 1934, 1946
StuI AGGCCT 1 cut(s) 1925
StyD4I CCNGG 7 cut(s) 1134, 1216, 1231, 1386, 1465, 1578, 2114
TaaI ACNGT 5 cut(s) 331, 1460, 1750, 1957, 2042
TaiI ACGT 3 cut(s) 399, 1300, 1721
TaqI TCGA 3 cut(s) 375, 1065, 1174
TatI WGTACW 2 cut(s) 1157, 1606
TauI GCSGC 3 cut(s) 1880, 1895, 2012
TfiI GAWTC 7 cut(s) 367, 404, 763, 845, 964, 1311, 1513
Tru1I TTAA 7 cut(s) 558, 749, 1277, 1323, 1493, 1691, 2093
Tru9I TTAA 7 cut(s) 558, 749, 1277, 1323, 1493, 1691, 2093
TscAI CASTG 3 cut(s) 1646, 1794, 1909
TseFI GTSAC 3 cut(s) 19, 1382, 1957
TseI GCWGC 6 cut(s) 126, 243, 1203, 1895, 2012, 2081
Tsp45I GTSAC 3 cut(s) 19, 1382, 1957
TspDTI ATGAA 8 cut(s) 194, 417, 458, 1321, 1377, 1749, 1791, 2007
TspGWI ACGGA 1 cut(s) 1543
TspRI CASTG 3 cut(s) 1646, 1794, 1909
Van91I CCANNNNNTGG 2 cut(s) 773, 2061
XapI RAATTY 4 cut(s) 138, 597, 928, 1067
XbaI TCTAGA 3 cut(s) 355, 853, 1933
XcmI CCANNNNNNNNNTGG 1 cut(s) 407
XmnI GAANNNNTTC 2 cut(s) 138, 849
XspI CTAG 9 cut(s) 218, 356, 419, 726, 809, 854, 1377, 1934, 1946
ZraI GACGTC 1 cut(s) 397
Zsp2I ATGCAT 1 cut(s) 70
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.