Rh1BG178800

TMV resistance protein N-like

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1B
Physical Location & Seq
Forward (+)
28560848 .. 28582414
21567 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1BG178800.1

Sequence Viewer

Length: 1803 bp
ATGAAGCATCTTCCATCTTTGAAGATCCTTGATCTCCGCCATTCCCATGACCTGATAAAAAGCGGTGACTTCTCATTGGTCCCCAATCTAGAGAGACTGATATTTGAAGATTGTTCAAGCTTGGTTGATGTCCATGAATCTGTTGGAAACTTAGAGAAGCTCGTATACTTGAACATGAGGGATTGCAAAAGTATTGGCAAACTTCCAAAGAACATTTGTATGCTGAAAGTACTAGAGACACTTATTATATCCGGTTGCTCAAATCTTTATGAGTTTCCAATGGAGGTTGGGAAGATGAAATTTCTGAAAGTTCTTGAAGCAGATGGAATTTCAATAAATCGATTAGTCACAACTTCTGGGGAAGCTGAATCATGGCCAAGAAAAAGTGTTGATAACTTTTGGGCTTGTTTGTCCTGCACTTTAGTTCATTTAAGTCTTCCACATTGCAATCTTTCTGATGATGCTTTTCCTTCTGATGCTGTTAACTTATACTCATTGAAGGGTTTGGATCTCAGCAATAATCCAATTTGTAGCTTACCAGATTTCGTCAGAGGCCTTAGAGGGCTCAATTCAATGTTACTTTGGGGGTGCAGAGATCTCAAATCACTTGTAAGGTTACCAAGAGTAAGAACTTTGGATGTCCACTTGTGTGAATCCTTGGAAAGTGTAACGTTTCAATCGATATCGTGCATACCAGAGTCAATAGCCTTGATTGCTTACAAGTCCCAACTAGTTGAGATTGAGTACTGGTTCAAGTTAGAAGCCATTGAAAAAGTGGATTTAGAAATGATCAAGCTTTTGTGTTTGTGCAACTTGGAATCCATGGAACGCATTTGGATGCACACCCCATATAACAACGCTGAAGTGACGATGCTTCCCATCCAGGGACTGTATGAATATGGTATATTTAGCACATTTCTTCCTACAAAGGGAAACGACGTTCCAGGGCAGTTCAGCCATACAAGTACAGGGTCATCACGTTCAATGTCCTTTACTGTGCCTGCACCTTTACTTCCTAATCAAAGGATCCGAGGCTTGAACATCTTCTGTGTATATGCAAACTACGATGTTGACGTCAGGTGCATTGATCCAATAATAATTAGAGTCAATAATAAGAGCAAAGGTCTGAAGTGGATCTATGGACCAACATGTTACGGCATTCCAAGCCATAATGAAAAAGATGTGGTATGGTTAAGCCATTGGAAGTTGGGAAATCGATTGGAAGCTGGCGATGAAGTTACTGTTACAGTATTTCCATTTGAACCATTCCAGATAAAAGAGTGGGGCTTCCAGGTTGTGCATGAGCAAGAAGGCAAAATAAGTAACCAACACAACACCACATATCCAGATGATAATGACGTTATTGGTAAATATTGTACAGATTTTTCCGAATTATACCAGGTGATGCCGGGAACATACTTCCTCTGCGGTGGACCTATGATATATGATAGACAGTCACATTTATTACAAAAAGGGTCAGTTTTGTTCAATCACATTATTGGAGATTCTGATGAAAGTGCAGCAACAAAAGAAGCAATGAGAGACCGAAAAAAGTTCTGCAGTAGGAGTGGGCTTGTTACCATTACTGGTGCTATGTCTTTGATTTGCAGTCCAGGCCGCATTTCAAAAGAAGGAAGGAAATCCAAGCCAAAAATTAAATACACTAGTTTAACCCAGCCAAAAGCTCAACCTTTACTAGTTCGCATTCTCTTTTGCTTTTTCCTTCTTTTGGTTCAACATGTTGCAGTTTCTTTTTTGATAAAGAAGTTTTTTATCTCCTATCAAGATCATTATTCCGAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

600

Amino Acids

68.04

Weight (kDa)

6.97

Isoelectric Point (pI)

32.6

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 33 - 108 4e-09 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000036)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G57630 AT1G72930 AT5G38344
fragaria_vesca FvH4_1g27020 FvH4_2g00931 FvH4_2g17330 FvH4_2g17330 FvH4_2g17340 FvH4_2g17350 FvH4_2g20690 FvH4_5g15301 FvH4_5g34194 FvH4_5g38530 FvH4_5g38740 FvH4_5g38740 FvH4_5g38740 FvH4_6g03800 FvH4_7g09791 FvH4_7g09800 FvH4_7g09800 FvH4_7g10510 FvH4_7g10520 FvH4_7g10520 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750
malus_domestica MD02G1217100.v1.1 MD02G1217200.v1.1 MD02G1217400.v1.1 MD02G1217600.v1.1 MD02G1264800.v1.1 MD02G1264900.v1.1 MD02G1302100.v1.1 MD04G1010700.v1.1 MD05G1006800.v1.1 MD05G1140100.v1.1 MD05G1140200.v1.1 MD05G1152200.v1.1 MD07G1073500.v1.1 MD07G1101700.v1.1 MD07G1102200.v1.1 MD07G1103200.v1.1 MD07G1112300.v1.1 MD08G1018200.v1.1 MD08G1018400.v1.1 MD08G1018800.v1.1 MD08G1019000.v1.1 MD08G1019100.v1.1 MD08G1019200.v1.1 MD08G1019300.v1.1 MD08G1019400.v1.1 MD08G1019600.v1.1 MD08G1019900.v1.1 MD08G1020000.v1.1 MD08G1020200.v1.1 MD08G1020500.v1.1 MD08G1020700.v1.1 MD08G1020800.v1.1 MD08G1040700.v1.1 MD11G1112400.v1.1 MD12G1068600.v1.1 MD12G1193200.v1.1 MD13G1050600.v1.1 MD15G1374900.v1.1 MD15G1375100.v1.1 MD15G1416500.v1.1 MD17G1072500.v1.1 MD17G1274200.v1.1 MD17G1274900.v1.1
prunus_persica Prupe.2G121000_v2.0.a1 Prupe.2G121000_v2.0.a1 Prupe.2G125800_v2.0.a1 Prupe.2G126000_v2.0.a1 Prupe.2G126100_v2.0.a1 Prupe.2G126200_v2.0.a1 Prupe.2G126300_v2.0.a1 Prupe.2G126400_v2.0.a1 Prupe.2G126500_v2.0.a1 Prupe.2G126600_v2.0.a1 Prupe.2G126700_v2.0.a1 Prupe.2G126700_v2.0.a1 Prupe.2G126800_v2.0.a1 Prupe.2G126900_v2.0.a1 Prupe.2G127000_v2.0.a1 Prupe.2G127000_v2.0.a1 Prupe.2G127000_v2.0.a1 Prupe.2G127000_v2.0.a1 Prupe.2G135500_v2.0.a1 Prupe.2G135600_v2.0.a1 Prupe.2G135700_v2.0.a1 Prupe.2G135700_v2.0.a1 Prupe.3G009800_v2.0.a1 Prupe.3G010200_v2.0.a1 Prupe.3G131000_v2.0.a1 Prupe.4G260800_v2.0.a1 Prupe.4G260900_v2.0.a1 Prupe.6G083100_v2.0.a1 Prupe.6G083200_v2.0.a1 Prupe.6G083400_v2.0.a1 Prupe.6G132100_v2.0.a1 Prupe.8G184900_v2.0.a1 Prupe.8G185200_v2.0.a1 Prupe.8G185300_v2.0.a1
pyrus_communis pycom02g17870 pycom02g17880 pycom02g19520 pycom02g22610 pycom02g22630 pycom02g22680 pycom05g13540 pycom05g14680 pycom07g04880 pycom07g04890 pycom07g05690 pycom07g05710 pycom07g05720 pycom07g05750 pycom07g05780 pycom07g06300 pycom07g08320 pycom07g08330 pycom07g08350 pycom07g08360 pycom07g08370 pycom07g08410 pycom07g08420 pycom07g08430 pycom07g08440 pycom07g08470 pycom07g08480 pycom07g08520 pycom07g08550 pycom07g08560 pycom07g08640 pycom07g08660 pycom07g08670 pycom07g08680 pycom07g08690 pycom07g08720 pycom07g08730 pycom07g08790 pycom07g08800 pycom07g08810 pycom07g08860 pycom07g08890 pycom07g09720 pycom08g01590 pycom08g01600 pycom08g01620 pycom08g01630 pycom08g01640 pycom10g12630 pycom15g16490 pycom17g07200 pycom17g07210 pycom17g07220 pycom17g11730 pycom17g11740 pycom17g27340 pycom17g27380
rosa_chinensis RchiOBHm_Chr1g0342571 RchiOBHm_Chr1g0346231 RchiOBHm_Chr1g0346831 RchiOBHm_Chr1g0346891 RchiOBHm_Chr1g0348311 RchiOBHm_Chr1g0348321 RchiOBHm_Chr1g0348331 RchiOBHm_Chr1g0348361 RchiOBHm_Chr1g0348371 RchiOBHm_Chr1g0348381 RchiOBHm_Chr1g0348401 RchiOBHm_Chr1g0348411 RchiOBHm_Chr1g0348421 RchiOBHm_Chr1g0348431 RchiOBHm_Chr2g0130881 RchiOBHm_Chr3g0487331 RchiOBHm_Chr5g0060371 RchiOBHm_Chr6g0246491 RchiOBHm_Chr6g0246871 RchiOBHm_Chr6g0250311 RchiOBHm_Chr6g0250781 RchiOBHm_Chr6g0251431 RchiOBHm_Chr6g0281871 RchiOBHm_Chr6g0281881 RchiOBHm_Chr6g0281931 RchiOBHm_Chr6g0281941 RchiOBHm_Chr6g0281951 RchiOBHm_Chr6g0281971 RchiOBHm_Chr6g0281981 RchiOBHm_Chr7g0240541 RchiOBHm_Chr7g0240631 RchiOBHm_Chr7g0240671
rosa_laevigata RLG00000000627 RLG00000000631 RLG00000000641 RLG00000000645 RLG00000000652 RLG00000000662 RLG00000000663 RLG00000000667 RLG00000000670 RLG00000000702 RLG00000001216 RLG00000001219 RLG00000007678 RLG00000012923 RLG00000012996 RLG00000013243 RLG00000017513 RLG00000017514 RLG00000020936 RLG00000022755 RLG00000023013 RLG00000028646 RLG00000028654 RLG00000028662 RLG00000028665 RLG00000028667 RLG00000028711 RLG00000028714 RLG00000028716 RLG00000028770 RLG00000028771 RLG00000028773 RLG00000028778 RLG00000028798 RLG00000028809 RLG00000028813 RLG00000029334 RLG00000030003 RLG00000033910 RLG00000034358 RLG00000035430
rosa_multiflora Rmu_co8031134.1_g000001 Rmu_co8092796.1_g000001 Rmu_co8130156.1_g000001 Rmu_co8325323.1_g000001 Rmu_co8424083.1_g000002 Rmu_sc0000008.1_g000003 Rmu_sc0000008.1_g000011 Rmu_sc0000008.1_g000015 Rmu_sc0000008.1_g000020 Rmu_sc0000091.1_g000015 Rmu_sc0000091.1_g000018 Rmu_sc0000091.1_g000029 Rmu_sc0000091.1_g000031 Rmu_sc0000391.1_g000004 Rmu_sc0001070.1_g000030 Rmu_sc0001293.1_g000016 Rmu_sc0001674.1_g000006 Rmu_sc0001731.1_g000002 Rmu_sc0001731.1_g000003 Rmu_sc0001731.1_g000005 Rmu_sc0001911.1_g000029 Rmu_sc0001913.1_g000038 Rmu_sc0001955.1_g000025 Rmu_sc0001992.1_g000022 Rmu_sc0001992.1_g000028 Rmu_sc0001992.1_g000031 Rmu_sc0002517.1_g000013 Rmu_sc0002517.1_g000017 Rmu_sc0002551.1_g000022 Rmu_sc0002551.1_g000029 Rmu_sc0002551.1_g000038 Rmu_sc0002705.1_g000015 Rmu_sc0002705.1_g000016 Rmu_sc0002882.1_g000055 Rmu_sc0003232.1_g000027 Rmu_sc0003363.1_g000037 Rmu_sc0003600.1_g000054 Rmu_sc0003918.1_g000011 Rmu_sc0004395.1_g000011 Rmu_sc0005071.1_g000004 Rmu_sc0005255.1_g000018 Rmu_sc0005327.1_g000004 Rmu_sc0005597.1_g000007 Rmu_sc0007060.1_g000007 Rmu_sc0007310.1_g000003 Rmu_sc0007383.1_g000014 Rmu_sc0007799.1_g000003 Rmu_sc0008477.1_g000016 Rmu_sc0010151.1_g000009 Rmu_sc0011217.1_g000005 Rmu_sc0016269.1_g000006 Rmu_sc0021495.1_g000001 Rmu_sc0027364.1_g000001 Rmu_sc0029432.1_g000001 Rmu_sc0041386.1_g000001 Rmu_ssc0000126.1_g000023 Rmu_ssc0000126.1_g000027
rosa_roxburghii Rroxscaffold_1G00006130 Rroxscaffold_1G00023320 Rroxscaffold_1G00038770 Rroxscaffold_2G00119800 Rroxscaffold_2G00121860 Rroxscaffold_3G00219780 Rroxscaffold_3G00219890 Rroxscaffold_4G00306740 Rroxscaffold_4G00306820 Rroxscaffold_4G00307000 Rroxscaffold_4G00307010 Rroxscaffold_4G00307020 Rroxscaffold_4G00308030 Rroxscaffold_4G00308070 Rroxscaffold_4G00308450 Rroxscaffold_4G00308460 Rroxscaffold_4G00315320 Rroxscaffold_5G00352470 Rroxscaffold_5G00371420 Rroxscaffold_6G00392300 Rroxscaffold_6G00394870 Rroxscaffold_6G00394890 Rroxscaffold_7G00186700 Rroxscaffold_7G00194980 Rroxscaffold_7G00216840
rosa_rugosa Rorug01G0076100 Rorug01G0128100 Rorug01G0149000.1 Rorug01G0149500.1 Rorug01G0180000 Rorug01G0180100 Rorug01G0182900 Rorug01G0184000 Rorug01G0184100 Rorug01G0184300 Rorug01G0184600 Rorug01G0184700 Rorug01G0184700 Rorug01G0184900 Rorug01G0185000 Rorug01G0185100 Rorug01G0189300 Rorug01G0194100 Rorug01G0194100 Rorug01G0194200 Rorug01G0194400 Rorug01G0194400 Rorug01G0194500 Rorug02G0090400 Rorug02G0090400 Rorug03G0233000 Rorug03G0233100 Rorug05G0178600 Rorug05G0178700 Rorug05G0579200 Rorug06G0144100 Rorug06G0144300 Rorug06G0144300 Rorug06G0179300 Rorug06G0208800 Rorug07G0323500 Rorug07G0337000
rosa_samantha Rh1AG046100 Rh1AG201400 Rh1AG201800 Rh1AG202100 Rh1AG202600 Rh1AG211500 Rh1AG211800 Rh1AG212200 Rh1AG212500 Rh1AG212600 Rh1AG214200 Rh1BG168000 Rh1BG168300 Rh1BG168500 Rh1BG177900 Rh1BG178200 Rh1BG178300 Rh1BG178800 Rh1BG178900 Rh1CG080900 Rh1CG183300 Rh1CG186300 Rh1CG186700 Rh1CG187000 Rh1CG187300 Rh1CG193400 Rh1CG195800 Rh1CG196000 Rh1CG196100 Rh1CG196400 Rh1CG196500 Rh1CG196800 Rh1CG198800 Rh1CG442600 Rh1DG086200 Rh1DG155400 Rh1DG156200 Rh1DG194000 Rh1DG194300 Rh1DG194900 Rh1DG197000 Rh1DG198800 Rh1DG199000 Rh1DG199200 Rh1DG202000 Rh1DG203900 Rh1DG207600 Rh1DG207900 Rh1DG208000 Rh1DG208500 Rh1DG208600 Rh1DG208700 Rh3CG339100 Rh5AG106500 Rh5AG264800 Rh5AG265300 Rh5CG302800 Rh5DG277900 Rh6AG257600 Rh6AG257700 Rh6BG260500 Rh6BG260700 Rh6CG259600 Rh6CG259700 Rh6DG252100 Rh7DG126900
rosa_wichuraiana Rw0G005780 Rw0G007540 Rw0G007550 Rw0G007560 Rw0G009390 Rw1G016900 Rw1G016930 Rw1G016940 Rw1G016970 Rw1G017860 Rw1G017890 Rw1G017900 Rw1G017910 Rw1G017920 Rw1G017960 Rw1G017970 Rw1G017980 Rw1G018150 Rw4G000830 Rw5G009290 Rw5G018950 Rw5G024850 Rw5G024870 Rw5G040460 Rw6G022290 Rw7G041020 Rw7G041200 Rw7G041360 Rw7G041450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1077
AccI GTMKAC 1 cut(s) 165
AciI CCGC 4 cut(s) 37, 63, 1428, 1618
AclI AACGTT 1 cut(s) 671
AclWI GGATC 6 cut(s) 19, 516, 1021, 1034, 1082, 1142
AcoI YGGCCR 1 cut(s) 374
AcsI RAATTY 2 cut(s) 299, 327
AcuI CTGAAG 2 cut(s) 882, 1148
AcyI GRCGYC 1 cut(s) 1074
AfaI GTAC 4 cut(s) 231, 746, 967, 1378
AfiI CCNNNNNNNGG 3 cut(s) 884, 929, 1729
AflIII ACRYGT 2 cut(s) 1148, 1738
AhlI ACTAGT 3 cut(s) 730, 1664, 1696
AjnI CCWGG 5 cut(s) 882, 943, 1290, 1398, 1612
AleI CACNNNNGTG 1 cut(s) 648
AloI GAACNNNNNNTCC 2 cut(s) 924, 956
AluBI AGCT 7 cut(s) 120, 160, 365, 534, 796, 1226, 1685
AluI AGCT 7 cut(s) 120, 160, 365, 534, 796, 1226, 1685
Alw26I GTCTC 3 cut(s) 88, 230, 1536
AlwI GGATC 6 cut(s) 19, 516, 1021, 1034, 1082, 1142
AlwNI CAGNNNCTG 1 cut(s) 889
AoxI GGCC 3 cut(s) 374, 553, 1615
ApeKI GCWGC 1 cut(s) 1520
ApoI RAATTY 2 cut(s) 299, 327
Asp700I GAANNNNTTC 1 cut(s) 1043
AspS9I GGNCC 3 cut(s) 79, 1142, 1433
AsuC2I CCSGG 1 cut(s) 1410
AsuHPI GGTGA 2 cut(s) 77, 1414
AvaII GGWCC 3 cut(s) 79, 1142, 1433
BalI TGGCCA 1 cut(s) 376
BamHI GGATCC 1 cut(s) 1026
BanII GRGCYC 1 cut(s) 567
BarI GAAGNNNNNNTAC 2 cut(s) 149, 181
BbsI GAAGAC 1 cut(s) 428
BbvI GCAGC 1 cut(s) 1532
BccI CCATC 3 cut(s) 22, 317, 887
BceAI ACGGC 1 cut(s) 1171
BciT130I CCWGG 5 cut(s) 884, 945, 1292, 1400, 1614
BclI TGATCA 1 cut(s) 789
BcnI CCSGG 1 cut(s) 1410
BcoDI GTCTC 3 cut(s) 88, 230, 1536
BcuI ACTAGT 3 cut(s) 730, 1664, 1696
BfaI CTAG 5 cut(s) 89, 233, 731, 1665, 1697
BfmI CTRYAG 1 cut(s) 1558
BglII AGATCT 1 cut(s) 595
BisI GCNGC 2 cut(s) 1521, 1618
BlsI GCNGC 2 cut(s) 1522, 1619
BmcAI AGTACT 2 cut(s) 231, 746
Bme1390I CCNGG 6 cut(s) 884, 945, 1292, 1400, 1410, 1614
Bme18I GGWCC 3 cut(s) 79, 1142, 1433
BmgT120I GGNCC 3 cut(s) 79, 1142, 1433
BmiI GGNNCC 2 cut(s) 81, 1028
BmrFI CCNGG 6 cut(s) 884, 945, 1292, 1400, 1410, 1614
BmsI GCATC 6 cut(s) 16, 451, 466, 828, 861, 1395
BpiI GAAGAC 1 cut(s) 428
BpuMI CCSGG 1 cut(s) 1410
Bsa29I ATCGAT 3 cut(s) 340, 680, 1216
BsaHI GRCGYC 1 cut(s) 1074
BsaI GGTCTC 1 cut(s) 1536
BsaJI CCNNGG 5 cut(s) 657, 822, 883, 944, 1030
BsaWI WCCGGW 1 cut(s) 251
Bsc4I CCNNNNNNNGG 3 cut(s) 884, 929, 1729
Bse1I ACTGG 2 cut(s) 752, 1591
Bse3DI GCAATG 2 cut(s) 442, 1542
BseBI CCWGG 5 cut(s) 884, 945, 1292, 1400, 1614
BseCI ATCGAT 3 cut(s) 340, 680, 1216
BseDI CCNNGG 5 cut(s) 657, 822, 883, 944, 1030
BseGI GGATG 3 cut(s) 643, 843, 879
BseLI CCNNNNNNNGG 3 cut(s) 884, 929, 1729
BseMI GCAATG 2 cut(s) 442, 1542
BseMII CTCAG 1 cut(s) 526
BseNI ACTGG 2 cut(s) 752, 1591
BseXI GCAGC 1 cut(s) 1532
BseYI CCCAGC 1 cut(s) 1674
BsgI GTGCAG 4 cut(s) 400, 610, 987, 1539
BshFI GGCC 3 cut(s) 376, 555, 1617
BshVI ATCGAT 3 cut(s) 340, 680, 1216
BsiSI CCGG 2 cut(s) 252, 1409
BslFI GGGAC 3 cut(s) 65, 709, 900
BslI CCNNNNNNNGG 3 cut(s) 884, 929, 1729
BsmAI GTCTC 3 cut(s) 88, 230, 1536
BsmFI GGGAC 3 cut(s) 65, 709, 900
BsmI GAATGC 2 cut(s) 1158, 1704
BsnI GGCC 3 cut(s) 376, 555, 1617
Bso31I GGTCTC 1 cut(s) 1536
Bsp1286I GDGCHC 1 cut(s) 567
Bsp1407I TGTACA 1 cut(s) 1376
Bsp143I GATC 9 cut(s) 24, 31, 508, 595, 789, 1026, 1087, 1134, 1786
Bsp19I CCATGG 1 cut(s) 822
BspACI CCGC 4 cut(s) 37, 63, 1428, 1618
BspANI GGCC 3 cut(s) 376, 555, 1617
BspCNI CTCAG 1 cut(s) 525
BspDI ATCGAT 3 cut(s) 340, 680, 1216
BspLI GGNNCC 2 cut(s) 81, 1028
BspMAI CTGCAG 1 cut(s) 1562
BspPI GGATC 6 cut(s) 19, 516, 1021, 1034, 1082, 1142
BspTNI GGTCTC 1 cut(s) 1536
BsrDI GCAATG 2 cut(s) 442, 1542
BsrGI TGTACA 1 cut(s) 1376
BsrI ACTGG 2 cut(s) 752, 1591
BssECI CCNNGG 5 cut(s) 657, 822, 883, 944, 1030
BssMI GATC 9 cut(s) 24, 31, 508, 595, 789, 1026, 1087, 1134, 1786
BssNAI GTATAC 1 cut(s) 166
BssNI GRCGYC 1 cut(s) 1074
BssT1I CCWWGG 2 cut(s) 657, 822
Bst1107I GTATAC 1 cut(s) 166
Bst2UI CCWGG 5 cut(s) 884, 945, 1292, 1400, 1614
Bst4CI ACNGT 5 cut(s) 891, 997, 1243, 1249, 1455
BstACI GRCGYC 1 cut(s) 1074
BstAUI TGTACA 1 cut(s) 1376
BstC8I GCNNGC 2 cut(s) 1002, 1228
BstDEI CTNAG 3 cut(s) 151, 512, 557
BstDSI CCRYGG 1 cut(s) 822
BstEII GGTNACC 1 cut(s) 615
BstF5I GGATG 3 cut(s) 643, 843, 879
BstKTI GATC 9 cut(s) 27, 34, 511, 598, 792, 1029, 1090, 1137, 1789
BstMAI GTCTC 3 cut(s) 88, 230, 1536
BstMBI GATC 9 cut(s) 24, 31, 508, 595, 789, 1026, 1087, 1134, 1786
BstMWI GCNNNNNNNGC 3 cut(s) 713, 1164, 1614
BstNI CCWGG 5 cut(s) 884, 945, 1292, 1400, 1614
BstNSI RCATGY 2 cut(s) 1152, 1742
BstPI GGTNACC 1 cut(s) 615
BstSCI CCNGG 6 cut(s) 882, 943, 1290, 1398, 1408, 1612
BstSFI CTRYAG 1 cut(s) 1558
BstV1I GCAGC 1 cut(s) 1532
BstV2I GAAGAC 1 cut(s) 428
BstX2I RGATCY 5 cut(s) 24, 508, 595, 1026, 1134
BstYI RGATCY 5 cut(s) 24, 508, 595, 1026, 1134
BstZ17I GTATAC 1 cut(s) 166
Bsu15I ATCGAT 3 cut(s) 340, 680, 1216
BsuRI GGCC 3 cut(s) 376, 555, 1617
BsuTUI ATCGAT 3 cut(s) 340, 680, 1216
BtgI CCRYGG 1 cut(s) 822
BtgZI GCGATG 1 cut(s) 1245
BtsCI GGATG 3 cut(s) 643, 843, 879
Cac8I GCNNGC 2 cut(s) 1002, 1228
CaiI CAGNNNCTG 1 cut(s) 889
Cfr13I GGNCC 3 cut(s) 79, 1142, 1433
ClaI ATCGAT 3 cut(s) 340, 680, 1216
CsiI ACCWGGT 1 cut(s) 1398
Csp6I GTAC 4 cut(s) 230, 745, 966, 1377
CviAII CATG 8 cut(s) 47, 134, 175, 372, 823, 1149, 1301, 1739
CviQI GTAC 4 cut(s) 230, 745, 966, 1377
DdeI CTNAG 3 cut(s) 151, 512, 557
DpnI GATC 9 cut(s) 26, 33, 510, 597, 791, 1028, 1089, 1136, 1788
DpnII GATC 9 cut(s) 24, 31, 508, 595, 789, 1026, 1087, 1134, 1786
EaeI YGGCCR 1 cut(s) 374
EciI GGCGGA 1 cut(s) 26
Eco130I CCWWGG 2 cut(s) 657, 822
Eco147I AGGCCT 1 cut(s) 555
Eco24I GRGCYC 1 cut(s) 567
Eco31I GGTCTC 1 cut(s) 1536
Eco32I GATATC 1 cut(s) 684
Eco47I GGWCC 3 cut(s) 79, 1142, 1433
Eco57I CTGAAG 2 cut(s) 882, 1148
Eco91I GGTNACC 1 cut(s) 615
EcoO65I GGTNACC 1 cut(s) 615
EcoRII CCWGG 5 cut(s) 882, 943, 1290, 1398, 1612
EcoRV GATATC 1 cut(s) 684
EcoT14I CCWWGG 2 cut(s) 657, 822
EcoT38I GRGCYC 1 cut(s) 567
ErhI CCWWGG 2 cut(s) 657, 822
FaeI CATG 8 cut(s) 50, 137, 178, 375, 826, 1152, 1304, 1742
FaqI GGGAC 3 cut(s) 65, 709, 900
FatI CATG 8 cut(s) 46, 133, 174, 371, 822, 1148, 1300, 1738
FbaI TGATCA 1 cut(s) 789
FblI GTMKAC 1 cut(s) 165
Fnu4HI GCNGC 2 cut(s) 1521, 1618
FokI GGATG 3 cut(s) 650, 850, 866
FriOI GRGCYC 1 cut(s) 567
Fsp4HI GCNGC 2 cut(s) 1521, 1618
FspBI CTAG 5 cut(s) 89, 233, 731, 1665, 1697
GluI GCNGC 2 cut(s) 1521, 1618
GsaI CCCAGC 1 cut(s) 1678
HaeIII GGCC 3 cut(s) 376, 555, 1617
HapII CCGG 2 cut(s) 252, 1409
Hin1I GRCGYC 1 cut(s) 1074
Hin1II CATG 8 cut(s) 50, 137, 178, 375, 826, 1152, 1304, 1742
HincII GTYRAC 2 cut(s) 484, 1072
HindII GTYRAC 2 cut(s) 484, 1072
HindIII AAGCTT 2 cut(s) 118, 794
HinfI GANTC 7 cut(s) 137, 368, 653, 698, 818, 1104, 1505
HpaI GTTAAC 1 cut(s) 484
HpaII CCGG 2 cut(s) 252, 1409
HphI GGTGA 2 cut(s) 77, 1414
Hpy166II GTNNAC 5 cut(s) 166, 484, 643, 1072, 1433
Hpy188I TCNGA 9 cut(s) 306, 457, 475, 551, 1031, 1128, 1390, 1510, 1798
Hpy188III TCNNGA 5 cut(s) 89, 314, 1270, 1346, 1784
Hpy8I GTNNAC 5 cut(s) 166, 484, 643, 1072, 1433
Hpy99I CGWCG 1 cut(s) 941
HpyAV CCTTC 6 cut(s) 480, 493, 1304, 1625, 1629, 1733
HpyCH4III ACNGT 5 cut(s) 891, 997, 1243, 1249, 1455
HpyCH4IV ACGT 5 cut(s) 671, 939, 979, 1074, 1359
HpyF10VI GCNNNNNNNGC 3 cut(s) 713, 1164, 1614
HpyF3I CTNAG 3 cut(s) 151, 512, 557
HpySE526I ACGT 5 cut(s) 671, 939, 979, 1074, 1359
Hsp92I GRCGYC 1 cut(s) 1074
Hsp92II CATG 8 cut(s) 50, 137, 178, 375, 826, 1152, 1304, 1742
Ksp22I TGATCA 1 cut(s) 789
KspAI GTTAAC 1 cut(s) 484
Kzo9I GATC 9 cut(s) 24, 31, 508, 595, 789, 1026, 1087, 1134, 1786
Lsp1109I GCAGC 1 cut(s) 1532
LweI GCATC 6 cut(s) 16, 451, 466, 828, 861, 1395
MabI ACCWGGT 1 cut(s) 1398
MaeI CTAG 5 cut(s) 89, 233, 731, 1665, 1697
MaeII ACGT 5 cut(s) 671, 939, 979, 1074, 1359
MalI GATC 9 cut(s) 26, 33, 510, 597, 791, 1028, 1089, 1136, 1788
MboI GATC 9 cut(s) 24, 31, 508, 595, 789, 1026, 1087, 1134, 1786
MboII GAAGA 6 cut(s) 34, 119, 304, 428, 911, 1036
MflI RGATCY 5 cut(s) 24, 508, 595, 1026, 1134
MhlI GDGCHC 1 cut(s) 567
MlsI TGGCCA 1 cut(s) 376
MluCI AATT 7 cut(s) 299, 327, 525, 568, 1098, 1391, 1653
MluNI TGGCCA 1 cut(s) 376
MlyI GAGTC 2 cut(s) 707, 1113
MmeI TCCRAC 1 cut(s) 124
MnlI CCTC 6 cut(s) 171, 277, 545, 554, 1025, 1433
Mox20I TGGCCA 1 cut(s) 376
MroXI GAANNNNTTC 1 cut(s) 1043
MscI TGGCCA 1 cut(s) 376
MseI TTAA 5 cut(s) 431, 483, 1193, 1656, 1670
MslI CAYNNNNRTG 4 cut(s) 45, 218, 648, 836
Msp20I TGGCCA 1 cut(s) 376
MspI CCGG 2 cut(s) 252, 1409
MspR9I CCNGG 6 cut(s) 884, 945, 1292, 1400, 1410, 1614
Mva1269I GAATGC 2 cut(s) 1158, 1704
MvaI CCWGG 5 cut(s) 884, 945, 1292, 1400, 1614
MwoI GCNNNNNNNGC 3 cut(s) 713, 1164, 1614
NciI CCSGG 1 cut(s) 1410
NcoI CCATGG 1 cut(s) 822
NdeII GATC 9 cut(s) 24, 31, 508, 595, 789, 1026, 1087, 1134, 1786
NlaIII CATG 8 cut(s) 50, 137, 178, 375, 826, 1152, 1304, 1742
NlaIV GGNNCC 2 cut(s) 81, 1028
NmuCI GTSAC 4 cut(s) 65, 346, 865, 1455
NspI RCATGY 2 cut(s) 1152, 1742
OliI CACNNNNGTG 1 cut(s) 648
PceI AGGCCT 1 cut(s) 555
PciI ACATGT 2 cut(s) 1148, 1738
PcsI WCGNNNNNNNCGW 2 cut(s) 677, 1071
PctI GAATGC 2 cut(s) 1158, 1704
PdmI GAANNNNTTC 1 cut(s) 1043
PfeI GAWTC 5 cut(s) 137, 368, 653, 818, 1505
PkrI GCNGC 2 cut(s) 1522, 1619
PleI GAGTC 2 cut(s) 706, 1112
PpsI GAGTC 2 cut(s) 706, 1112
PscI ACATGT 2 cut(s) 1148, 1738
Psp1406I AACGTT 1 cut(s) 671
Psp6I CCWGG 5 cut(s) 882, 943, 1290, 1398, 1612
PspEI GGTNACC 1 cut(s) 615
PspFI CCCAGC 1 cut(s) 1674
PspGI CCWGG 5 cut(s) 882, 943, 1290, 1398, 1612
PspN4I GGNNCC 2 cut(s) 81, 1028
PspPI GGNCC 3 cut(s) 79, 1142, 1433
PstI CTGCAG 1 cut(s) 1562
PstNI CAGNNNCTG 1 cut(s) 889
PsuI RGATCY 5 cut(s) 24, 508, 595, 1026, 1134
RsaI GTAC 4 cut(s) 231, 746, 967, 1378
RsaNI GTAC 4 cut(s) 230, 745, 966, 1377
RseI CAYNNNNRTG 4 cut(s) 45, 218, 648, 836
SaqAI TTAA 5 cut(s) 431, 483, 1193, 1656, 1670
SatI GCNGC 2 cut(s) 1521, 1618
Sau3AI GATC 9 cut(s) 24, 31, 508, 595, 789, 1026, 1087, 1134, 1786
Sau96I GGNCC 3 cut(s) 79, 1142, 1433
ScaI AGTACT 2 cut(s) 231, 746
SchI GAGTC 2 cut(s) 707, 1113
ScrFI CCNGG 6 cut(s) 884, 945, 1292, 1400, 1410, 1614
SduI GDGCHC 1 cut(s) 567
SexAI ACCWGGT 1 cut(s) 1398
SfaNI GCATC 6 cut(s) 16, 451, 466, 828, 861, 1395
SfcI CTRYAG 1 cut(s) 1558
SinI GGWCC 3 cut(s) 79, 1142, 1433
SmiMI CAYNNNNRTG 4 cut(s) 45, 218, 648, 836
SpeI ACTAGT 3 cut(s) 730, 1664, 1696
Sse9I AATT 7 cut(s) 299, 327, 525, 568, 1098, 1391, 1653
SseBI AGGCCT 1 cut(s) 555
SsiI CCGC 4 cut(s) 37, 63, 1428, 1618
SspI AATATT 1 cut(s) 1373
SspMI CTAG 5 cut(s) 89, 233, 731, 1665, 1697
StuI AGGCCT 1 cut(s) 555
StyD4I CCNGG 6 cut(s) 882, 943, 1290, 1398, 1408, 1612
StyI CCWWGG 2 cut(s) 657, 822
TaaI ACNGT 5 cut(s) 891, 997, 1243, 1249, 1455
TaiI ACGT 5 cut(s) 674, 942, 982, 1077, 1362
TaqI TCGA 3 cut(s) 340, 680, 1216
TaqII GACCGA 1 cut(s) 1560
TasI AATT 7 cut(s) 299, 327, 525, 568, 1098, 1391, 1653
TatI WGTACW 4 cut(s) 229, 744, 965, 1376
TauI GCSGC 1 cut(s) 1620
TfiI GAWTC 5 cut(s) 137, 368, 653, 818, 1505
Tru1I TTAA 5 cut(s) 431, 483, 1193, 1656, 1670
Tru9I TTAA 5 cut(s) 431, 483, 1193, 1656, 1670
TseFI GTSAC 4 cut(s) 65, 346, 865, 1455
TseI GCWGC 1 cut(s) 1520
Tsp45I GTSAC 4 cut(s) 65, 346, 865, 1455
TspDTI ATGAA 8 cut(s) 17, 150, 311, 416, 909, 1188, 1248, 1527
VpaK11BI GGWCC 3 cut(s) 79, 1142, 1433
XapI RAATTY 2 cut(s) 299, 327
XbaI TCTAGA 1 cut(s) 88
XceI RCATGY 2 cut(s) 1152, 1742
XcmI CCANNNNNNNNNTGG 2 cut(s) 140, 772
XmiI GTMKAC 1 cut(s) 165
XmnI GAANNNNTTC 1 cut(s) 1043
XspI CTAG 5 cut(s) 89, 233, 731, 1665, 1697
ZraI GACGTC 1 cut(s) 1075
ZrmI AGTACT 2 cut(s) 231, 746
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.