RLG00000017514

TMV resistance protein N-like

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
Physical Location & Seq
Reverse (-)
17723114 .. 17727372
4259 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000017514

Sequence Viewer

Length: 2082 bp
ATGAACCACAGAGGAATCGACGCATTTAGAGATACTGAAGAGCTTCGGAGGGGGAAATCCATTTCACCAGAACTTCTCAAAGCAATCGAAGAGTCCAAGTTTGCAGTTACAGTTCTTTCCACCAACTATGCTACTTCAACTTGGTGTCTAGATGAACTTGCACATATTCTCGATTGCAGGAAAGTGAGGGGACTGGAAGTTCTTCCGGTTTTTTACCATGTAGAACCATCTGAGATAAGGAAGCAAACTGGAAACTACGGCAAGGCGTTTGCCAAGCATGAGACTGATTTCAAGGACAATATGATAAAGGTGGACAAGTGGAGGAAAGCTTTAGAGGATATAGCCAGTCTCTCCGGGTGGCATGTGACAGAGGATAGGTTTGTGACTATACCGAATGACATTGGTCGCTTATCCTCTTTGCATCAATTGGATTTCAGTGGAAACAATATAGTGAGCATGCTGCATGAAATTGGACACTTATCCTCTTTGAAATCATTAAATCTACGAAGGTGTGGTCTAGCAGAAGAAGTCTTTGATAGCCTCTACGGCTTGTCCTCTTTGCAGATTTTGGATCAGAGTGGACACAATCTTTTGATCATACCTAATGAAATCGACCGAGTTTATGGTATAGTGCCATTTGAAATTCGTTTTCCACATTGTGCAACAATTCTAAATCTGTGGGAACATTGGAGCAGTGGCCCTTCTGTAACAATCCCACTTTCTGATGGTGACAGTACGTCTATGGGACTTGCTCTGTTTGTTGTTTTTGAAATCCTTGACCTTGAGGACGGCATTCTCAACAAGATTTGGGAATTGGAGGAGATAATCTGTGAATTTCACACTGATGATGGTTGTGAAAATTCCCTAGTTTTCCAGAACTTCATAGACTTCACGGGACGCAATGGACGTGAGAAGAGTTTCTATCTTAGTTTTCCTGCTCCAGTAAATTCATTTCCACCCTGGTTCTTCAATCACCATGCAGGGGATGTAACAGTTTGTCAACTTACTAGAAACTTGTTTTTGGGATTAGAACTATATGTTGTATTTACTCGGTGTGTATCTGCTTCAAGAGATGGTGATAAAAGTTTCTTGTTTCACGTTGAATTGTGTGCTCATGATCCTGAAAGTACAGTAATGCTCGGATCCCTCAAGATAGACAGTTTTCTTGGGACATCAGGTCAACTTGTTGTATTACATCTACCACGTGCTTATTTTCTCCGACGGTTGAAGAAATGTCAGGGTATTAACGCATTGTTTAGATCTATTGACCCAGAAATGAAGGTTCAAGTGTGTGGGAGCCGTTTACTCTTTAAGCTCGATTTGCAAGACTTGATACATTCGTTAGTTGCTGCTGCGGGCATTTTGGGGGAACATGTCCGTGCTCAAGCTTGTTCCCGGGCATATATATGCATGGTTGAAAGTCCTATCTGTGAAGCTCAAGCTGTCGATAGGCATAGAAACAAAAACAGAAAAACAGAGAAAAAGAAGGAAAATGCCGAATCTGTTGACCAGGACAATAAAGTGGAAGGAGCAAATCCCATTTCTTCCAGTTGCAGGGTATTTCCATGTTCGTGCAGTGATGTATCTCATGGGTCCCGGGTGGGGATCGAATTACCCCCACAAGTGTGTGATGATTACCATTTTAGGGGACTCGTCATATGTGCTGCTATTCGAGTCCATGACCGGCGTCCAAGAACCTCCCTGGTCAAACTTCTCTGTCAATTGAGAGCAGAGGACTATTGCTTGCACCATGTCCCAACATGGTGCATCACTAATGAGAATTTAGATCCTTTGCTTCTCGATGGATTCACTTTCCTGACCTACATACCCGTTGCTTTGGTAACAGAGTTCAATGCTGTTGGGAATGTGGAGGCCAGATTTCATATCGAGTGCCCAGACTTGATAGTGGACAGGTGCGGTATCAGGCTCTTGTACCGGGAAGAAGAGGAGAATTTTAAGAAAGAAATCATCCATCGCTGGAGCAATTTTGTTTATCTTTCTACCTCGTATCGGTCAACTTCTAGAAGCAGGCGAAAATGTTCATCAATGCAGATGTACAAGGCACGAACTGCCAACGGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

694

Amino Acids

78.7

Weight (kDa)

6.21

Isoelectric Point (pI)

43.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TIR PF01582 2 - 123 2.7e-39 TIR domain
TIR_2 PF13676 3 - 76 2.3e-10 TIR domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000036)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G57630 AT1G72930 AT5G38344
fragaria_vesca FvH4_1g27020 FvH4_2g00931 FvH4_2g17330 FvH4_2g17330 FvH4_2g17340 FvH4_2g17350 FvH4_2g20690 FvH4_5g15301 FvH4_5g34194 FvH4_5g38530 FvH4_5g38740 FvH4_5g38740 FvH4_5g38740 FvH4_6g03800 FvH4_7g09791 FvH4_7g09800 FvH4_7g09800 FvH4_7g10510 FvH4_7g10520 FvH4_7g10520 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750
malus_domestica MD02G1217100.v1.1 MD02G1217200.v1.1 MD02G1217400.v1.1 MD02G1217600.v1.1 MD02G1264800.v1.1 MD02G1264900.v1.1 MD02G1302100.v1.1 MD04G1010700.v1.1 MD05G1006800.v1.1 MD05G1140100.v1.1 MD05G1140200.v1.1 MD05G1152200.v1.1 MD07G1073500.v1.1 MD07G1101700.v1.1 MD07G1102200.v1.1 MD07G1103200.v1.1 MD07G1112300.v1.1 MD08G1018200.v1.1 MD08G1018400.v1.1 MD08G1018800.v1.1 MD08G1019000.v1.1 MD08G1019100.v1.1 MD08G1019200.v1.1 MD08G1019300.v1.1 MD08G1019400.v1.1 MD08G1019600.v1.1 MD08G1019900.v1.1 MD08G1020000.v1.1 MD08G1020200.v1.1 MD08G1020500.v1.1 MD08G1020700.v1.1 MD08G1020800.v1.1 MD08G1040700.v1.1 MD11G1112400.v1.1 MD12G1068600.v1.1 MD12G1193200.v1.1 MD13G1050600.v1.1 MD15G1374900.v1.1 MD15G1375100.v1.1 MD15G1416500.v1.1 MD17G1072500.v1.1 MD17G1274200.v1.1 MD17G1274900.v1.1
prunus_persica Prupe.2G121000_v2.0.a1 Prupe.2G121000_v2.0.a1 Prupe.2G125800_v2.0.a1 Prupe.2G126000_v2.0.a1 Prupe.2G126100_v2.0.a1 Prupe.2G126200_v2.0.a1 Prupe.2G126300_v2.0.a1 Prupe.2G126400_v2.0.a1 Prupe.2G126500_v2.0.a1 Prupe.2G126600_v2.0.a1 Prupe.2G126700_v2.0.a1 Prupe.2G126700_v2.0.a1 Prupe.2G126800_v2.0.a1 Prupe.2G126900_v2.0.a1 Prupe.2G127000_v2.0.a1 Prupe.2G127000_v2.0.a1 Prupe.2G127000_v2.0.a1 Prupe.2G127000_v2.0.a1 Prupe.2G135500_v2.0.a1 Prupe.2G135600_v2.0.a1 Prupe.2G135700_v2.0.a1 Prupe.2G135700_v2.0.a1 Prupe.3G009800_v2.0.a1 Prupe.3G010200_v2.0.a1 Prupe.3G131000_v2.0.a1 Prupe.4G260800_v2.0.a1 Prupe.4G260900_v2.0.a1 Prupe.6G083100_v2.0.a1 Prupe.6G083200_v2.0.a1 Prupe.6G083400_v2.0.a1 Prupe.6G132100_v2.0.a1 Prupe.8G184900_v2.0.a1 Prupe.8G185200_v2.0.a1 Prupe.8G185300_v2.0.a1
pyrus_communis pycom02g17870 pycom02g17880 pycom02g19520 pycom02g22610 pycom02g22630 pycom02g22680 pycom05g13540 pycom05g14680 pycom07g04880 pycom07g04890 pycom07g05690 pycom07g05710 pycom07g05720 pycom07g05750 pycom07g05780 pycom07g06300 pycom07g08320 pycom07g08330 pycom07g08350 pycom07g08360 pycom07g08370 pycom07g08410 pycom07g08420 pycom07g08430 pycom07g08440 pycom07g08470 pycom07g08480 pycom07g08520 pycom07g08550 pycom07g08560 pycom07g08640 pycom07g08660 pycom07g08670 pycom07g08680 pycom07g08690 pycom07g08720 pycom07g08730 pycom07g08790 pycom07g08800 pycom07g08810 pycom07g08860 pycom07g08890 pycom07g09720 pycom08g01590 pycom08g01600 pycom08g01620 pycom08g01630 pycom08g01640 pycom10g12630 pycom15g16490 pycom17g07200 pycom17g07210 pycom17g07220 pycom17g11730 pycom17g11740 pycom17g27340 pycom17g27380
rosa_chinensis RchiOBHm_Chr1g0342571 RchiOBHm_Chr1g0346231 RchiOBHm_Chr1g0346831 RchiOBHm_Chr1g0346891 RchiOBHm_Chr1g0348311 RchiOBHm_Chr1g0348321 RchiOBHm_Chr1g0348331 RchiOBHm_Chr1g0348361 RchiOBHm_Chr1g0348371 RchiOBHm_Chr1g0348381 RchiOBHm_Chr1g0348401 RchiOBHm_Chr1g0348411 RchiOBHm_Chr1g0348421 RchiOBHm_Chr1g0348431 RchiOBHm_Chr2g0130881 RchiOBHm_Chr3g0487331 RchiOBHm_Chr5g0060371 RchiOBHm_Chr6g0246491 RchiOBHm_Chr6g0246871 RchiOBHm_Chr6g0250311 RchiOBHm_Chr6g0250781 RchiOBHm_Chr6g0251431 RchiOBHm_Chr6g0281871 RchiOBHm_Chr6g0281881 RchiOBHm_Chr6g0281931 RchiOBHm_Chr6g0281941 RchiOBHm_Chr6g0281951 RchiOBHm_Chr6g0281971 RchiOBHm_Chr6g0281981 RchiOBHm_Chr7g0240541 RchiOBHm_Chr7g0240631 RchiOBHm_Chr7g0240671
rosa_laevigata RLG00000000627 RLG00000000631 RLG00000000641 RLG00000000645 RLG00000000652 RLG00000000662 RLG00000000663 RLG00000000667 RLG00000000670 RLG00000000702 RLG00000001216 RLG00000001219 RLG00000007678 RLG00000012923 RLG00000012996 RLG00000013243 RLG00000017513 RLG00000017514 RLG00000020936 RLG00000022755 RLG00000023013 RLG00000028646 RLG00000028654 RLG00000028662 RLG00000028665 RLG00000028667 RLG00000028711 RLG00000028714 RLG00000028716 RLG00000028770 RLG00000028771 RLG00000028773 RLG00000028778 RLG00000028798 RLG00000028809 RLG00000028813 RLG00000029334 RLG00000030003 RLG00000033910 RLG00000034358 RLG00000035430
rosa_multiflora Rmu_co8031134.1_g000001 Rmu_co8092796.1_g000001 Rmu_co8130156.1_g000001 Rmu_co8325323.1_g000001 Rmu_co8424083.1_g000002 Rmu_sc0000008.1_g000003 Rmu_sc0000008.1_g000011 Rmu_sc0000008.1_g000015 Rmu_sc0000008.1_g000020 Rmu_sc0000091.1_g000015 Rmu_sc0000091.1_g000018 Rmu_sc0000091.1_g000029 Rmu_sc0000091.1_g000031 Rmu_sc0000391.1_g000004 Rmu_sc0001070.1_g000030 Rmu_sc0001293.1_g000016 Rmu_sc0001674.1_g000006 Rmu_sc0001731.1_g000002 Rmu_sc0001731.1_g000003 Rmu_sc0001731.1_g000005 Rmu_sc0001911.1_g000029 Rmu_sc0001913.1_g000038 Rmu_sc0001955.1_g000025 Rmu_sc0001992.1_g000022 Rmu_sc0001992.1_g000028 Rmu_sc0001992.1_g000031 Rmu_sc0002517.1_g000013 Rmu_sc0002517.1_g000017 Rmu_sc0002551.1_g000022 Rmu_sc0002551.1_g000029 Rmu_sc0002551.1_g000038 Rmu_sc0002705.1_g000015 Rmu_sc0002705.1_g000016 Rmu_sc0002882.1_g000055 Rmu_sc0003232.1_g000027 Rmu_sc0003363.1_g000037 Rmu_sc0003600.1_g000054 Rmu_sc0003918.1_g000011 Rmu_sc0004395.1_g000011 Rmu_sc0005071.1_g000004 Rmu_sc0005255.1_g000018 Rmu_sc0005327.1_g000004 Rmu_sc0005597.1_g000007 Rmu_sc0007060.1_g000007 Rmu_sc0007310.1_g000003 Rmu_sc0007383.1_g000014 Rmu_sc0007799.1_g000003 Rmu_sc0008477.1_g000016 Rmu_sc0010151.1_g000009 Rmu_sc0011217.1_g000005 Rmu_sc0016269.1_g000006 Rmu_sc0021495.1_g000001 Rmu_sc0027364.1_g000001 Rmu_sc0029432.1_g000001 Rmu_sc0041386.1_g000001 Rmu_ssc0000126.1_g000023 Rmu_ssc0000126.1_g000027
rosa_roxburghii Rroxscaffold_1G00006130 Rroxscaffold_1G00023320 Rroxscaffold_1G00038770 Rroxscaffold_2G00119800 Rroxscaffold_2G00121860 Rroxscaffold_3G00219780 Rroxscaffold_3G00219890 Rroxscaffold_4G00306740 Rroxscaffold_4G00306820 Rroxscaffold_4G00307000 Rroxscaffold_4G00307010 Rroxscaffold_4G00307020 Rroxscaffold_4G00308030 Rroxscaffold_4G00308070 Rroxscaffold_4G00308450 Rroxscaffold_4G00308460 Rroxscaffold_4G00315320 Rroxscaffold_5G00352470 Rroxscaffold_5G00371420 Rroxscaffold_6G00392300 Rroxscaffold_6G00394870 Rroxscaffold_6G00394890 Rroxscaffold_7G00186700 Rroxscaffold_7G00194980 Rroxscaffold_7G00216840
rosa_rugosa Rorug01G0076100 Rorug01G0128100 Rorug01G0149000.1 Rorug01G0149500.1 Rorug01G0180000 Rorug01G0180100 Rorug01G0182900 Rorug01G0184000 Rorug01G0184100 Rorug01G0184300 Rorug01G0184600 Rorug01G0184700 Rorug01G0184700 Rorug01G0184900 Rorug01G0185000 Rorug01G0185100 Rorug01G0189300 Rorug01G0194100 Rorug01G0194100 Rorug01G0194200 Rorug01G0194400 Rorug01G0194400 Rorug01G0194500 Rorug02G0090400 Rorug02G0090400 Rorug03G0233000 Rorug03G0233100 Rorug05G0178600 Rorug05G0178700 Rorug05G0579200 Rorug06G0144100 Rorug06G0144300 Rorug06G0144300 Rorug06G0179300 Rorug06G0208800 Rorug07G0323500 Rorug07G0337000
rosa_samantha Rh1AG046100 Rh1AG201400 Rh1AG201800 Rh1AG202100 Rh1AG202600 Rh1AG211500 Rh1AG211800 Rh1AG212200 Rh1AG212500 Rh1AG212600 Rh1AG214200 Rh1BG168000 Rh1BG168300 Rh1BG168500 Rh1BG177900 Rh1BG178200 Rh1BG178300 Rh1BG178800 Rh1BG178900 Rh1CG080900 Rh1CG183300 Rh1CG186300 Rh1CG186700 Rh1CG187000 Rh1CG187300 Rh1CG193400 Rh1CG195800 Rh1CG196000 Rh1CG196100 Rh1CG196400 Rh1CG196500 Rh1CG196800 Rh1CG198800 Rh1CG442600 Rh1DG086200 Rh1DG155400 Rh1DG156200 Rh1DG194000 Rh1DG194300 Rh1DG194900 Rh1DG197000 Rh1DG198800 Rh1DG199000 Rh1DG199200 Rh1DG202000 Rh1DG203900 Rh1DG207600 Rh1DG207900 Rh1DG208000 Rh1DG208500 Rh1DG208600 Rh1DG208700 Rh3CG339100 Rh5AG106500 Rh5AG264800 Rh5AG265300 Rh5CG302800 Rh5DG277900 Rh6AG257600 Rh6AG257700 Rh6BG260500 Rh6BG260700 Rh6CG259600 Rh6CG259700 Rh6DG252100 Rh7DG126900
rosa_wichuraiana Rw0G005780 Rw0G007540 Rw0G007550 Rw0G007560 Rw0G009390 Rw1G016900 Rw1G016930 Rw1G016940 Rw1G016970 Rw1G017860 Rw1G017890 Rw1G017900 Rw1G017910 Rw1G017920 Rw1G017960 Rw1G017970 Rw1G017980 Rw1G018150 Rw4G000830 Rw5G009290 Rw5G018950 Rw5G024850 Rw5G024870 Rw5G040460 Rw6G022290 Rw7G041020 Rw7G041200 Rw7G041360 Rw7G041450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 1355, 1917
AclWI GGATC 6 cut(s) 579, 1112, 1137, 1150, 1613, 1781
AcsI RAATTY 6 cut(s) 642, 833, 859, 946, 1780, 1951
AcuI CTGAAG 1 cut(s) 57
AcvI CACGTG 1 cut(s) 1205
AcyI GRCGYC 1 cut(s) 1687
AdeI CACNNNGTG 1 cut(s) 659
AfaI GTAC 4 cut(s) 736, 1129, 1934, 2057
AfiI CCNNNNNNNGG 5 cut(s) 982, 1554, 1602, 1645, 2010
AflIII ACRYGT 1 cut(s) 1372
AhdI GACNNNNNGTC 2 cut(s) 736, 1176
AjiI CACGTC 1 cut(s) 908
AjnI CCWGG 3 cut(s) 959, 1509, 1701
AleI CACNNNNGTG 1 cut(s) 1624
AloI GAACNNNNNNTCC 2 cut(s) 183, 215
AluBI AGCT 6 cut(s) 43, 329, 1315, 1388, 1436, 1442
AluI AGCT 6 cut(s) 43, 329, 1315, 1388, 1436, 1442
Alw21I GWGCWC 2 cut(s) 1114, 1384
Alw26I GTCTC 2 cut(s) 275, 353
AlwI GGATC 6 cut(s) 579, 1112, 1137, 1150, 1613, 1781
Ama87I CYCGRG 2 cut(s) 1395, 1596
AoxI GGCC 2 cut(s) 697, 1872
ApeKI GCWGC 4 cut(s) 460, 1349, 1352, 1664
ApoI RAATTY 6 cut(s) 642, 833, 859, 946, 1780, 1951
ArsI GACNNNNNNTTYG 2 cut(s) 499, 531
Asp700I GAANNNNTTC 4 cut(s) 42, 201, 917, 2038
AspS9I GGNCC 2 cut(s) 698, 1593
AsuC2I CCSGG 6 cut(s) 355, 1396, 1397, 1597, 1598, 1937
AsuHPI GGTGA 4 cut(s) 57, 740, 965, 1088
AvaI CYCGRG 2 cut(s) 1395, 1596
AvaII GGWCC 1 cut(s) 1593
BaeGI GKGCMC 1 cut(s) 1895
BaeI ACNNNNGTAYC 2 cut(s) 1325, 1358
BamHI GGATCC 1 cut(s) 1142
BbrPI CACGTG 1 cut(s) 1205
Bbv12I GWGCWC 2 cut(s) 1114, 1384
BbvI GCAGC 4 cut(s) 447, 1336, 1339, 1651
BccI CCATC 6 cut(s) 235, 719, 842, 1067, 1796, 1980
BceAI ACGGC 4 cut(s) 274, 562, 805, 1284
BciT130I CCWGG 3 cut(s) 961, 1511, 1703
BclI TGATCA 1 cut(s) 594
BcnI CCSGG 6 cut(s) 355, 1396, 1397, 1597, 1598, 1937
BcoDI GTCTC 2 cut(s) 275, 353
BfaI CTAG 5 cut(s) 149, 518, 866, 1008, 2022
BglI GCCNNNNNGGC 1 cut(s) 546
BglII AGATCT 1 cut(s) 1259
BisI GCNGC 4 cut(s) 461, 1350, 1353, 1665
BlsI GCNGC 4 cut(s) 462, 1351, 1354, 1666
Bme1390I CCNGG 9 cut(s) 355, 961, 1396, 1397, 1511, 1597, 1598, 1703, 1937
Bme18I GGWCC 1 cut(s) 1593
BmeRI GACNNNNNGTC 2 cut(s) 736, 1176
BmeT110I CYCGRG 2 cut(s) 1395, 1596
BmgBI CACGTC 1 cut(s) 908
BmgT120I GGNCC 2 cut(s) 698, 1593
BmiI GGNNCC 4 cut(s) 1144, 1298, 1594, 1595
BmrFI CCNGG 9 cut(s) 355, 961, 1396, 1397, 1511, 1597, 1598, 1703, 1937
BmsI GCATC 2 cut(s) 430, 1776
BoxI GACNNNNGTC 2 cut(s) 402, 1686
BpmI CTGGAG 2 cut(s) 924, 1999
BpuEI CTTGAG 4 cut(s) 803, 1133, 1368, 1422
BpuMI CCSGG 6 cut(s) 355, 1396, 1397, 1597, 1598, 1937
BsaAI YACGTR 1 cut(s) 1205
BsaHI GRCGYC 1 cut(s) 1687
BsaJI CCNNGG 4 cut(s) 959, 1395, 1596, 1701
BsaWI WCCGGW 1 cut(s) 205
Bsc4I CCNNNNNNNGG 5 cut(s) 982, 1554, 1602, 1645, 2010
Bse118I RCCGGY 1 cut(s) 1683
Bse1I ACTGG 5 cut(s) 198, 253, 345, 941, 1548
Bse3DI GCAATG 1 cut(s) 907
BseBI CCWGG 3 cut(s) 961, 1511, 1703
BseDI CCNNGG 4 cut(s) 959, 1395, 1596, 1701
BseGI GGATG 2 cut(s) 991, 1968
BseLI CCNNNNNNNGG 5 cut(s) 982, 1554, 1602, 1645, 2010
BseMI GCAATG 1 cut(s) 907
BseMII CTCAG 1 cut(s) 222
BseNI ACTGG 5 cut(s) 198, 253, 345, 941, 1548
BseRI GAGGAG 2 cut(s) 833, 1961
BseSI GKGCMC 1 cut(s) 1895
BseXI GCAGC 4 cut(s) 447, 1336, 1339, 1651
BsgI GTGCAG 1 cut(s) 1594
Bsh1285I CGRYCG 1 cut(s) 616
BshFI GGCC 2 cut(s) 699, 1874
BsiEI CGRYCG 1 cut(s) 616
BsiHKAI GWGCWC 2 cut(s) 1114, 1384
BsiHKCI CYCGRG 2 cut(s) 1395, 1596
BsiSI CCGG 6 cut(s) 206, 354, 1396, 1597, 1684, 1936
BslFI GGGAC 7 cut(s) 204, 759, 909, 1183, 1579, 1662, 1739
BslI CCNNNNNNNGG 5 cut(s) 982, 1554, 1602, 1645, 2010
BsmAI GTCTC 2 cut(s) 275, 353
BsmFI GGGAC 7 cut(s) 204, 759, 909, 1183, 1579, 1662, 1739
BsmI GAATGC 1 cut(s) 792
BsnI GGCC 2 cut(s) 699, 1874
BsoBI CYCGRG 2 cut(s) 1395, 1596
Bsp1286I GDGCHC 3 cut(s) 1114, 1384, 1895
Bsp1407I TGTACA 1 cut(s) 2055
Bsp143I GATC 7 cut(s) 571, 594, 1117, 1142, 1259, 1605, 1786
BspACI CCGC 2 cut(s) 1355, 1917
BspANI GGCC 2 cut(s) 699, 1874
BspCNI CTCAG 1 cut(s) 223
BspHI TCATGA 1 cut(s) 1114
BspLI GGNNCC 4 cut(s) 1144, 1298, 1594, 1595
BspPI GGATC 6 cut(s) 579, 1112, 1137, 1150, 1613, 1781
BspQI GCTCTTC 1 cut(s) 33
BsrDI GCAATG 1 cut(s) 907
BsrFI RCCGGY 1 cut(s) 1683
BsrGI TGTACA 1 cut(s) 2055
BsrI ACTGG 5 cut(s) 198, 253, 345, 941, 1548
BssAI RCCGGY 1 cut(s) 1683
BssECI CCNNGG 4 cut(s) 959, 1395, 1596, 1701
BssMI GATC 7 cut(s) 571, 594, 1117, 1142, 1259, 1605, 1786
BssNI GRCGYC 1 cut(s) 1687
Bst2UI CCWGG 3 cut(s) 961, 1511, 1703
Bst4CI ACNGT 7 cut(s) 112, 734, 994, 1132, 1160, 1224, 2078
Bst6I CTCTTC 4 cut(s) 33, 84, 908, 1938
BstACI GRCGYC 1 cut(s) 1687
BstAPI GCANNNNNTGC 1 cut(s) 2069
BstAUI TGTACA 1 cut(s) 2055
BstBAI YACGTR 1 cut(s) 1205
BstC8I GCNNGC 4 cut(s) 458, 1357, 1745, 2030
BstDEI CTNAG 2 cut(s) 231, 926
BstF5I GGATG 2 cut(s) 991, 1968
BstKTI GATC 7 cut(s) 574, 597, 1120, 1145, 1262, 1608, 1789
BstMAI GTCTC 2 cut(s) 275, 353
BstMBI GATC 7 cut(s) 571, 594, 1117, 1142, 1259, 1605, 1786
BstMCI CGRYCG 1 cut(s) 616
BstMWI GCNNNNNNNGC 3 cut(s) 546, 1321, 2069
BstNI CCWGG 3 cut(s) 961, 1511, 1703
BstNSI RCATGY 3 cut(s) 365, 460, 1376
BstPAI GACNNNNGTC 2 cut(s) 402, 1686
BstSCI CCNGG 9 cut(s) 353, 959, 1394, 1395, 1509, 1595, 1596, 1701, 1935
BstSLI GKGCMC 1 cut(s) 1895
BstV1I GCAGC 4 cut(s) 447, 1336, 1339, 1651
BstX2I RGATCY 3 cut(s) 1142, 1259, 1786
BstYI RGATCY 3 cut(s) 1142, 1259, 1786
BsuRI GGCC 2 cut(s) 699, 1874
BtgZI GCGATG 1 cut(s) 1958
BtrI CACGTC 1 cut(s) 908
BtsCI GGATG 2 cut(s) 991, 1968
BtsI GCAGTG 2 cut(s) 700, 1582
BtsIMutI CAGTG 4 cut(s) 442, 700, 840, 1582
Cac8I GCNNGC 4 cut(s) 458, 1357, 1745, 2030
CciI TCATGA 1 cut(s) 1114
Cfr10I RCCGGY 1 cut(s) 1683
Cfr13I GGNCC 2 cut(s) 698, 1593
Cfr9I CCCGGG 2 cut(s) 1395, 1596
CseI GACGC 3 cut(s) 29, 906, 1676
Csp6I GTAC 4 cut(s) 735, 1128, 1933, 2056
CviQI GTAC 4 cut(s) 735, 1128, 1933, 2056
DdeI CTNAG 2 cut(s) 231, 926
DpnI GATC 7 cut(s) 573, 596, 1119, 1144, 1261, 1607, 1788
DpnII GATC 7 cut(s) 571, 594, 1117, 1142, 1259, 1605, 1786
DraIII CACNNNGTG 1 cut(s) 659
DriI GACNNNNNGTC 2 cut(s) 736, 1176
Eam1104I CTCTTC 4 cut(s) 33, 84, 908, 1938
Eam1105I GACNNNNNGTC 2 cut(s) 736, 1176
EarI CTCTTC 4 cut(s) 33, 84, 908, 1938
Eco47I GGWCC 1 cut(s) 1593
Eco57I CTGAAG 1 cut(s) 57
Eco72I CACGTG 1 cut(s) 1205
Eco88I CYCGRG 2 cut(s) 1395, 1596
EcoO109I RGGNCCY 1 cut(s) 1593
EcoRII CCWGG 3 cut(s) 959, 1509, 1701
EcoT22I ATGCAT 1 cut(s) 1412
FaqI GGGAC 7 cut(s) 204, 759, 909, 1183, 1579, 1662, 1739
FauI CCCGC 1 cut(s) 1348
FauNDI CATATG 1 cut(s) 1658
FbaI TGATCA 1 cut(s) 594
Fnu4HI GCNGC 4 cut(s) 461, 1350, 1353, 1665
FokI GGATG 2 cut(s) 998, 1955
Fsp4HI GCNGC 4 cut(s) 461, 1350, 1353, 1665
FspBI CTAG 5 cut(s) 149, 518, 866, 1008, 2022
GluI GCNGC 4 cut(s) 461, 1350, 1353, 1665
GsuI CTGGAG 2 cut(s) 924, 1999
HaeIII GGCC 2 cut(s) 699, 1874
HapII CCGG 6 cut(s) 206, 354, 1396, 1597, 1684, 1936
HgaI GACGC 3 cut(s) 29, 906, 1676
Hin1I GRCGYC 1 cut(s) 1687
HincII GTYRAC 4 cut(s) 1001, 1181, 1507, 2016
HindII GTYRAC 4 cut(s) 1001, 1181, 1507, 2016
HindIII AAGCTT 2 cut(s) 327, 1386
HinfI GANTC 6 cut(s) 15, 92, 1499, 1650, 1674, 1806
HpaII CCGG 6 cut(s) 206, 354, 1396, 1597, 1684, 1936
HphI GGTGA 4 cut(s) 57, 740, 965, 1088
Hpy166II GTNNAC 8 cut(s) 313, 581, 1001, 1181, 1304, 1507, 1909, 2016
Hpy188I TCNGA 6 cut(s) 48, 232, 576, 724, 1142, 1220
Hpy8I GTNNAC 8 cut(s) 313, 581, 1001, 1181, 1304, 1507, 1909, 2016
Hpy99I CGWCG 2 cut(s) 23, 1224
HpyAV CCTTC 5 cut(s) 501, 711, 1273, 1480, 1520
HpyCH4III ACNGT 7 cut(s) 112, 734, 994, 1132, 1160, 1224, 2078
HpyCH4IV ACGT 4 cut(s) 737, 907, 1098, 1204
HpyF10VI GCNNNNNNNGC 3 cut(s) 546, 1321, 2069
HpyF3I CTNAG 2 cut(s) 231, 926
HpySE526I ACGT 4 cut(s) 737, 907, 1098, 1204
Hsp92I GRCGYC 1 cut(s) 1687
KflI GGGWCCC 1 cut(s) 1593
Ksp22I TGATCA 1 cut(s) 594
Kzo9I GATC 7 cut(s) 571, 594, 1117, 1142, 1259, 1605, 1786
LguI GCTCTTC 1 cut(s) 33
LmnI GCTCC 5 cut(s) 690, 943, 1296, 1529, 1980
Lsp1109I GCAGC 4 cut(s) 447, 1336, 1339, 1651
LweI GCATC 2 cut(s) 430, 1776
MaeI CTAG 5 cut(s) 149, 518, 866, 1008, 2022
MaeII ACGT 4 cut(s) 737, 907, 1098, 1204
MaeIII GTNAC 7 cut(s) 106, 364, 382, 706, 728, 988, 1840
MalI GATC 7 cut(s) 573, 596, 1119, 1144, 1261, 1607, 1788
MboI GATC 7 cut(s) 571, 594, 1117, 1142, 1259, 1605, 1786
MfeI CAATTG 2 cut(s) 425, 1721
MflI RGATCY 3 cut(s) 1142, 1259, 1786
MhlI GDGCHC 3 cut(s) 1114, 1384, 1895
MlyI GAGTC 3 cut(s) 101, 1644, 1683
MmeI TCCRAC 1 cut(s) 1243
Mph1103I ATGCAT 1 cut(s) 1412
MroXI GAANNNNTTC 4 cut(s) 42, 201, 917, 2038
MseI TTAA 4 cut(s) 497, 1245, 1311, 1956
MslI CAYNNNNRTG 5 cut(s) 843, 1377, 1405, 1570, 1624
MspI CCGG 6 cut(s) 206, 354, 1396, 1597, 1684, 1936
MspR9I CCNGG 9 cut(s) 355, 961, 1396, 1397, 1511, 1597, 1598, 1703, 1937
MunI CAATTG 2 cut(s) 425, 1721
Mva1269I GAATGC 1 cut(s) 792
MvaI CCWGG 3 cut(s) 961, 1511, 1703
MwoI GCNNNNNNNGC 3 cut(s) 546, 1321, 2069
NciI CCSGG 6 cut(s) 355, 1396, 1397, 1597, 1598, 1937
NdeI CATATG 1 cut(s) 1658
NdeII GATC 7 cut(s) 571, 594, 1117, 1142, 1259, 1605, 1786
NlaIV GGNNCC 4 cut(s) 1144, 1298, 1594, 1595
NmuCI GTSAC 3 cut(s) 364, 382, 728
NsiI ATGCAT 1 cut(s) 1412
NspI RCATGY 3 cut(s) 365, 460, 1376
OliI CACNNNNGTG 1 cut(s) 1624
PaeI GCATGC 1 cut(s) 460
PagI TCATGA 1 cut(s) 1114
PciI ACATGT 1 cut(s) 1372
PciSI GCTCTTC 1 cut(s) 33
PcsI WCGNNNNNNNCGW 1 cut(s) 904
PctI GAATGC 1 cut(s) 792
PdmI GAANNNNTTC 4 cut(s) 42, 201, 917, 2038
PfeI GAWTC 3 cut(s) 15, 1499, 1806
PkrI GCNGC 4 cut(s) 462, 1351, 1354, 1666
PleI GAGTC 3 cut(s) 100, 1644, 1682
PmaCI CACGTG 1 cut(s) 1205
PmlI CACGTG 1 cut(s) 1205
PpsI GAGTC 3 cut(s) 100, 1644, 1682
Ppu21I YACGTR 1 cut(s) 1205
PpuMI RGGWCCY 1 cut(s) 1593
PscI ACATGT 1 cut(s) 1372
PshAI GACNNNNGTC 2 cut(s) 402, 1686
Psp5II RGGWCCY 1 cut(s) 1593
Psp6I CCWGG 3 cut(s) 959, 1509, 1701
PspCI CACGTG 1 cut(s) 1205
PspGI CCWGG 3 cut(s) 959, 1509, 1701
PspN4I GGNNCC 4 cut(s) 1144, 1298, 1594, 1595
PspPI GGNCC 2 cut(s) 698, 1593
PspPPI RGGWCCY 1 cut(s) 1593
PsuI RGATCY 3 cut(s) 1142, 1259, 1786
RsaI GTAC 4 cut(s) 736, 1129, 1934, 2057
RsaNI GTAC 4 cut(s) 735, 1128, 1933, 2056
RseI CAYNNNNRTG 5 cut(s) 843, 1377, 1405, 1570, 1624
SapI GCTCTTC 1 cut(s) 33
SaqAI TTAA 4 cut(s) 497, 1245, 1311, 1956
SatI GCNGC 4 cut(s) 461, 1350, 1353, 1665
Sau3AI GATC 7 cut(s) 571, 594, 1117, 1142, 1259, 1605, 1786
Sau96I GGNCC 2 cut(s) 698, 1593
SchI GAGTC 3 cut(s) 101, 1644, 1683
ScrFI CCNGG 9 cut(s) 355, 961, 1396, 1397, 1511, 1597, 1598, 1703, 1937
SduI GDGCHC 3 cut(s) 1114, 1384, 1895
SfaNI GCATC 2 cut(s) 430, 1776
SinI GGWCC 1 cut(s) 1593
SmaI CCCGGG 2 cut(s) 1397, 1598
SmiMI CAYNNNNRTG 5 cut(s) 843, 1377, 1405, 1570, 1624
SmlI CTYRAG 4 cut(s) 782, 1148, 1383, 1437
SmoI CTYRAG 4 cut(s) 782, 1148, 1383, 1437
SphI GCATGC 1 cut(s) 460
SsiI CCGC 2 cut(s) 1355, 1917
SspMI CTAG 5 cut(s) 149, 518, 866, 1008, 2022
StyD4I CCNGG 9 cut(s) 353, 959, 1394, 1395, 1509, 1595, 1596, 1701, 1935
TaaI ACNGT 7 cut(s) 112, 734, 994, 1132, 1160, 1224, 2078
TaiI ACGT 4 cut(s) 740, 910, 1101, 1207
TaqII GACCGA 2 cut(s) 630, 2001
TatI WGTACW 2 cut(s) 1127, 2055
TfiI GAWTC 3 cut(s) 15, 1499, 1806
Tru1I TTAA 4 cut(s) 497, 1245, 1311, 1956
Tru9I TTAA 4 cut(s) 497, 1245, 1311, 1956
TscAI CASTG 4 cut(s) 442, 700, 847, 1582
TseFI GTSAC 3 cut(s) 364, 382, 728
TseI GCWGC 4 cut(s) 460, 1349, 1352, 1664
Tsp45I GTSAC 3 cut(s) 364, 382, 728
TspDTI ATGAA 9 cut(s) 17, 168, 480, 621, 871, 939, 1292, 1871, 2031
TspGWI ACGGA 1 cut(s) 1367
TspMI CCCGGG 2 cut(s) 1395, 1596
TspRI CASTG 4 cut(s) 442, 700, 847, 1582
VpaK11BI GGWCC 1 cut(s) 1593
XapI RAATTY 6 cut(s) 642, 833, 859, 946, 1780, 1951
XbaI TCTAGA 2 cut(s) 148, 2021
XceI RCATGY 3 cut(s) 365, 460, 1376
XmaI CCCGGG 2 cut(s) 1395, 1596
XmnI GAANNNNTTC 4 cut(s) 42, 201, 917, 2038
XspI CTAG 5 cut(s) 149, 518, 866, 1008, 2022
Zsp2I ATGCAT 1 cut(s) 1412
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.