The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 301 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 496 |
| Acc36I | ACCTGC | 1 cut(s) | 301 |
| AccBSI | CCGCTC | 1 cut(s) | 937 |
| AccI | GTMKAC | 1 cut(s) | 1425 |
| AccIII | TCCGGA | 1 cut(s) | 1353 |
| AciI | CCGC | 4 cut(s) | 138, 149, 644, 935 |
| AclWI | GGATC | 2 cut(s) | 361, 1483 |
| AcoI | YGGCCR | 1 cut(s) | 1512 |
| AcsI | RAATTY | 5 cut(s) | 182, 534, 1016, 1067, 1551 |
| AdeI | CACNNNGTG | 1 cut(s) | 1244 |
| AfaI | GTAC | 5 cut(s) | 251, 599, 724, 942, 1083 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 548, 1127 |
| AflII | CTTAAG | 1 cut(s) | 1276 |
| AgsI | TTSAA | 9 cut(s) | 90, 527, 676, 929, 1066, 1105, 1110, 1166, 1210 |
| AjnI | CCWGG | 3 cut(s) | 1302, 1485, 1495 |
| Alw21I | GWGCWC | 1 cut(s) | 1353 |
| Alw26I | GTCTC | 2 cut(s) | 219, 313 |
| AlwI | GGATC | 2 cut(s) | 361, 1483 |
| Ama87I | CYCGRG | 2 cut(s) | 744, 826 |
| Aor13HI | TCCGGA | 1 cut(s) | 1353 |
| AoxI | GGCC | 1 cut(s) | 1512 |
| ApeKI | GCWGC | 8 cut(s) | 153, 164, 774, 811, 814, 870, 983, 1261 |
| ApoI | RAATTY | 5 cut(s) | 182, 534, 1016, 1067, 1551 |
| AseI | ATTAAT | 1 cut(s) | 366 |
| AspS9I | GGNCC | 3 cut(s) | 114, 902, 1281 |
| AsuC2I | CCSGG | 1 cut(s) | 1145 |
| AsuHPI | GGTGA | 3 cut(s) | 282, 851, 1485 |
| AsuII | TTCGAA | 1 cut(s) | 1021 |
| AvaI | CYCGRG | 2 cut(s) | 744, 826 |
| AvaII | GGWCC | 3 cut(s) | 114, 902, 1281 |
| BalI | TGGCCA | 1 cut(s) | 1514 |
| BanII | GRGCYC | 2 cut(s) | 1353, 1548 |
| BbsI | GAAGAC | 1 cut(s) | 622 |
| Bbv12I | GWGCWC | 1 cut(s) | 1353 |
| BbvI | GCAGC | 8 cut(s) | 140, 151, 786, 798, 826, 882, 970, 1248 |
| BccI | CCATC | 4 cut(s) | 311, 764, 1204, 1466 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1001, 1035 |
| BciT130I | CCWGG | 3 cut(s) | 1304, 1487, 1497 |
| BcnI | CCSGG | 1 cut(s) | 1145 |
| BcoDI | GTCTC | 2 cut(s) | 219, 313 |
| BfaI | CTAG | 5 cut(s) | 161, 347, 462, 516, 591 |
| BfmI | CTRYAG | 2 cut(s) | 726, 812 |
| BfrI | CTTAAG | 1 cut(s) | 1276 |
| BfuAI | ACCTGC | 1 cut(s) | 301 |
| BisI | GCNGC | 8 cut(s) | 154, 165, 775, 812, 815, 871, 984, 1262 |
| BlsI | GCNGC | 8 cut(s) | 155, 166, 776, 813, 816, 872, 985, 1263 |
| BmcAI | AGTACT | 1 cut(s) | 251 |
| Bme1390I | CCNGG | 4 cut(s) | 1145, 1304, 1487, 1497 |
| Bme18I | GGWCC | 3 cut(s) | 114, 902, 1281 |
| BmeT110I | CYCGRG | 2 cut(s) | 744, 826 |
| BmgT120I | GGNCC | 3 cut(s) | 114, 902, 1281 |
| BmrFI | CCNGG | 4 cut(s) | 1145, 1304, 1487, 1497 |
| BmsI | GCATC | 4 cut(s) | 31, 430, 480, 1323 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1373 |
| BpiI | GAAGAC | 1 cut(s) | 622 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 170, 202 |
| Bpu14I | TTCGAA | 1 cut(s) | 1021 |
| BpuEI | CTTGAG | 3 cut(s) | 891, 1286, 1480 |
| BpuMI | CCSGG | 1 cut(s) | 1145 |
| BsaAI | YACGTR | 1 cut(s) | 802 |
| BsaI | GGTCTC | 1 cut(s) | 219 |
| BsaJI | CCNNGG | 4 cut(s) | 494, 1303, 1396, 1540 |
| BsaWI | WCCGGW | 1 cut(s) | 1353 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 548, 1127 |
| Bse118I | RCCGGY | 2 cut(s) | 107, 640 |
| Bse1I | ACTGG | 1 cut(s) | 1132 |
| Bse3DI | GCAATG | 2 cut(s) | 17, 263 |
| BseAI | TCCGGA | 1 cut(s) | 1353 |
| BseBI | CCWGG | 3 cut(s) | 1304, 1487, 1497 |
| BseDI | CCNNGG | 4 cut(s) | 494, 1303, 1396, 1540 |
| BseGI | GGATG | 1 cut(s) | 445 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 548, 1127 |
| BseMI | GCAATG | 2 cut(s) | 17, 263 |
| BseMII | CTCAG | 4 cut(s) | 168, 201, 346, 890 |
| BseNI | ACTGG | 1 cut(s) | 1132 |
| BseXI | GCAGC | 8 cut(s) | 140, 151, 786, 798, 826, 882, 970, 1248 |
| BseYI | CCCAGC | 1 cut(s) | 1257 |
| BsgI | GTGCAG | 1 cut(s) | 279 |
| BshFI | GGCC | 1 cut(s) | 1514 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1353 |
| BsiHKCI | CYCGRG | 2 cut(s) | 744, 826 |
| BsiSI | CCGG | 4 cut(s) | 108, 641, 1145, 1354 |
| BsiWI | CGTACG | 1 cut(s) | 597 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 548, 1127 |
| BsmAI | GTCTC | 2 cut(s) | 219, 313 |
| BsmI | GAATGC | 2 cut(s) | 682, 975 |
| BsnI | GGCC | 1 cut(s) | 1514 |
| Bso31I | GGTCTC | 1 cut(s) | 219 |
| BsoBI | CYCGRG | 2 cut(s) | 744, 826 |
| Bsp119I | TTCGAA | 1 cut(s) | 1021 |
| Bsp1286I | GDGCHC | 2 cut(s) | 1353, 1548 |
| Bsp13I | TCCGGA | 1 cut(s) | 1353 |
| Bsp143I | GATC | 4 cut(s) | 353, 631, 660, 1475 |
| Bsp19I | CCATGG | 2 cut(s) | 494, 1396 |
| BspACI | CCGC | 4 cut(s) | 138, 149, 644, 935 |
| BspANI | GGCC | 1 cut(s) | 1514 |
| BspCNI | CTCAG | 4 cut(s) | 169, 200, 345, 889 |
| BspEI | TCCGGA | 1 cut(s) | 1353 |
| BspMAI | CTGCAG | 1 cut(s) | 816 |
| BspMI | ACCTGC | 1 cut(s) | 301 |
| BspPI | GGATC | 2 cut(s) | 361, 1483 |
| BspT104I | TTCGAA | 1 cut(s) | 1021 |
| BspTI | CTTAAG | 1 cut(s) | 1276 |
| BspTNI | GGTCTC | 1 cut(s) | 219 |
| BsrBI | CCGCTC | 1 cut(s) | 937 |
| BsrDI | GCAATG | 2 cut(s) | 17, 263 |
| BsrFI | RCCGGY | 2 cut(s) | 107, 640 |
| BsrI | ACTGG | 1 cut(s) | 1132 |
| BssAI | RCCGGY | 2 cut(s) | 107, 640 |
| BssECI | CCNNGG | 4 cut(s) | 494, 1303, 1396, 1540 |
| BssMI | GATC | 4 cut(s) | 353, 631, 660, 1475 |
| BssT1I | CCWWGG | 3 cut(s) | 494, 1396, 1540 |
| Bst2UI | CCWGG | 3 cut(s) | 1304, 1487, 1497 |
| Bst4CI | ACNGT | 4 cut(s) | 667, 685, 1342, 1375 |
| BstAFI | CTTAAG | 1 cut(s) | 1276 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 28 |
| BstBAI | YACGTR | 1 cut(s) | 802 |
| BstBI | TTCGAA | 1 cut(s) | 1021 |
| BstC8I | GCNNGC | 2 cut(s) | 151, 215 |
| BstDEI | CTNAG | 6 cut(s) | 177, 187, 238, 332, 876, 997 |
| BstDSI | CCRYGG | 2 cut(s) | 494, 1396 |
| BstF5I | GGATG | 1 cut(s) | 445 |
| BstKTI | GATC | 4 cut(s) | 356, 634, 663, 1478 |
| BstMAI | GTCTC | 2 cut(s) | 219, 313 |
| BstMBI | GATC | 4 cut(s) | 353, 631, 660, 1475 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 28, 150, 774, 1267 |
| BstNI | CCWGG | 3 cut(s) | 1304, 1487, 1497 |
| BstNSI | RCATGY | 1 cut(s) | 506 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1373 |
| BstSCI | CCNGG | 4 cut(s) | 1143, 1302, 1485, 1495 |
| BstSFI | CTRYAG | 2 cut(s) | 726, 812 |
| BstV1I | GCAGC | 8 cut(s) | 140, 151, 786, 798, 826, 882, 970, 1248 |
| BstV2I | GAAGAC | 1 cut(s) | 622 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1397 |
| BsuRI | GGCC | 1 cut(s) | 1514 |
| BtgI | CCRYGG | 2 cut(s) | 494, 1396 |
| BtgZI | GCGATG | 2 cut(s) | 20, 783 |
| BtsCI | GGATG | 1 cut(s) | 445 |
| BtsI | GCAGTG | 1 cut(s) | 144 |
| BtsIMutI | CAGTG | 4 cut(s) | 144, 195, 1206, 1425 |
| BveI | ACCTGC | 1 cut(s) | 301 |
| Cac8I | GCNNGC | 2 cut(s) | 151, 215 |
| Cfr10I | RCCGGY | 2 cut(s) | 107, 640 |
| Cfr13I | GGNCC | 3 cut(s) | 114, 902, 1281 |
| Csp6I | GTAC | 5 cut(s) | 250, 598, 723, 941, 1082 |
| CviAII | CATG | 5 cut(s) | 495, 503, 719, 834, 1397 |
| CviQI | GTAC | 5 cut(s) | 250, 598, 723, 941, 1082 |
| DdeI | CTNAG | 6 cut(s) | 177, 187, 238, 332, 876, 997 |
| DpnI | GATC | 4 cut(s) | 355, 633, 662, 1477 |
| DpnII | GATC | 4 cut(s) | 353, 631, 660, 1475 |
| DraIII | CACNNNGTG | 1 cut(s) | 1244 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 496 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 496 |
| EaeI | YGGCCR | 1 cut(s) | 1512 |
| EciI | GGCGGA | 1 cut(s) | 153 |
| Ecl136II | GAGCTC | 1 cut(s) | 1351 |
| Eco130I | CCWWGG | 3 cut(s) | 494, 1396, 1540 |
| Eco24I | GRGCYC | 2 cut(s) | 1353, 1548 |
| Eco31I | GGTCTC | 1 cut(s) | 219 |
| Eco47I | GGWCC | 3 cut(s) | 114, 902, 1281 |
| Eco53kI | GAGCTC | 1 cut(s) | 1351 |
| Eco88I | CYCGRG | 2 cut(s) | 744, 826 |
| EcoICRI | GAGCTC | 1 cut(s) | 1351 |
| EcoO109I | RGGNCCY | 1 cut(s) | 114 |
| EcoRII | CCWGG | 3 cut(s) | 1302, 1485, 1495 |
| EcoT14I | CCWWGG | 3 cut(s) | 494, 1396, 1540 |
| EcoT38I | GRGCYC | 2 cut(s) | 1353, 1548 |
| ErhI | CCWWGG | 3 cut(s) | 494, 1396, 1540 |
| FaeI | CATG | 5 cut(s) | 498, 506, 722, 837, 1400 |
| FatI | CATG | 5 cut(s) | 494, 502, 718, 833, 1396 |
| FauI | CCCGC | 3 cut(s) | 142, 637, 942 |
| FblI | GTMKAC | 1 cut(s) | 1425 |
| Fnu4HI | GCNGC | 8 cut(s) | 154, 165, 775, 812, 815, 871, 984, 1262 |
| FokI | GGATG | 1 cut(s) | 452 |
| FriOI | GRGCYC | 2 cut(s) | 1353, 1548 |
| Fsp4HI | GCNGC | 8 cut(s) | 154, 165, 775, 812, 815, 871, 984, 1262 |
| FspBI | CTAG | 5 cut(s) | 161, 347, 462, 516, 591 |
| GluI | GCNGC | 8 cut(s) | 154, 165, 775, 812, 815, 871, 984, 1262 |
| GsaI | CCCAGC | 1 cut(s) | 1261 |
| HaeIII | GGCC | 1 cut(s) | 1514 |
| HapII | CCGG | 4 cut(s) | 108, 641, 1145, 1354 |
| Hin1II | CATG | 5 cut(s) | 498, 506, 722, 837, 1400 |
| HincII | GTYRAC | 2 cut(s) | 1254, 1426 |
| HindII | GTYRAC | 2 cut(s) | 1254, 1426 |
| HindIII | AAGCTT | 3 cut(s) | 301, 795, 1160 |
| HinfI | GANTC | 8 cut(s) | 242, 258, 458, 490, 756, 993, 1148, 1490 |
| HpaII | CCGG | 4 cut(s) | 108, 641, 1145, 1354 |
| HphI | GGTGA | 3 cut(s) | 282, 851, 1485 |
| Hpy166II | GTNNAC | 6 cut(s) | 43, 688, 805, 1254, 1345, 1426 |
| Hpy188I | TCNGA | 5 cut(s) | 64, 178, 335, 879, 1379 |
| Hpy188III | TCNNGA | 7 cut(s) | 310, 462, 524, 673, 763, 908, 1354 |
| Hpy8I | GTNNAC | 6 cut(s) | 43, 688, 805, 1254, 1345, 1426 |
| HpyAV | CCTTC | 7 cut(s) | 127, 241, 959, 1150, 1309, 1393, 1492 |
| HpyCH4III | ACNGT | 4 cut(s) | 667, 685, 1342, 1375 |
| HpyCH4IV | ACGT | 1 cut(s) | 801 |
| HpyCH4V | TGCA | 8 cut(s) | 22, 167, 296, 680, 814, 973, 1365, 1407 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 28, 150, 774, 1267 |
| HpyF3I | CTNAG | 6 cut(s) | 177, 187, 238, 332, 876, 997 |
| HpySE526I | ACGT | 1 cut(s) | 801 |
| Hsp92II | CATG | 5 cut(s) | 498, 506, 722, 837, 1400 |
| Kpn2I | TCCGGA | 1 cut(s) | 1353 |
| Kzo9I | GATC | 4 cut(s) | 353, 631, 660, 1475 |
| LmnI | GCTCC | 5 cut(s) | 64, 273, 562, 860, 1356 |
| Lsp1109I | GCAGC | 8 cut(s) | 140, 151, 786, 798, 826, 882, 970, 1248 |
| LweI | GCATC | 4 cut(s) | 31, 430, 480, 1323 |
| MaeI | CTAG | 5 cut(s) | 161, 347, 462, 516, 591 |
| MaeII | ACGT | 1 cut(s) | 801 |
| MaeIII | GTNAC | 2 cut(s) | 1123, 1201 |
| MalI | GATC | 4 cut(s) | 355, 633, 662, 1477 |
| MbiI | CCGCTC | 1 cut(s) | 937 |
| MboI | GATC | 4 cut(s) | 353, 631, 660, 1475 |
| MboII | GAAGA | 7 cut(s) | 51, 110, 624, 626, 627, 748, 1545 |
| MfeI | CAATTG | 1 cut(s) | 1290 |
| MhlI | GDGCHC | 2 cut(s) | 1353, 1548 |
| MlsI | TGGCCA | 1 cut(s) | 1514 |
| MluNI | TGGCCA | 1 cut(s) | 1514 |
| MlyI | GAGTC | 2 cut(s) | 251, 484 |
| MmeI | TCCRAC | 1 cut(s) | 940 |
| MnlI | CCTC | 8 cut(s) | 134, 200, 329, 344, 740, 885, 915, 1044 |
| Mox20I | TGGCCA | 1 cut(s) | 1514 |
| MroI | TCCGGA | 1 cut(s) | 1353 |
| MscI | TGGCCA | 1 cut(s) | 1514 |
| MseI | TTAA | 8 cut(s) | 366, 467, 890, 950, 1277, 1452, 1523, 1557 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1395 |
| Msp20I | TGGCCA | 1 cut(s) | 1514 |
| MspA1I | CMGCKG | 3 cut(s) | 629, 811, 1261 |
| MspCI | CTTAAG | 1 cut(s) | 1276 |
| MspI | CCGG | 4 cut(s) | 108, 641, 1145, 1354 |
| MspR9I | CCNGG | 4 cut(s) | 1145, 1304, 1487, 1497 |
| MunI | CAATTG | 1 cut(s) | 1290 |
| Mva1269I | GAATGC | 2 cut(s) | 682, 975 |
| MvaI | CCWGG | 3 cut(s) | 1304, 1487, 1497 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 28, 150, 774, 1267 |
| NciI | CCSGG | 1 cut(s) | 1145 |
| NcoI | CCATGG | 2 cut(s) | 494, 1396 |
| NdeII | GATC | 4 cut(s) | 353, 631, 660, 1475 |
| NlaIII | CATG | 5 cut(s) | 498, 506, 722, 837, 1400 |
| NmuCI | GTSAC | 1 cut(s) | 1201 |
| NspI | RCATGY | 1 cut(s) | 506 |
| NspV | TTCGAA | 1 cut(s) | 1021 |
| PaeR7I | CTCGAG | 1 cut(s) | 744 |
| PaqCI | CACCTGC | 1 cut(s) | 301 |
| PctI | GAATGC | 2 cut(s) | 682, 975 |
| PfeI | GAWTC | 6 cut(s) | 258, 458, 756, 993, 1148, 1490 |
| Pfl23II | CGTACG | 1 cut(s) | 597 |
| PfoI | TCCNGGA | 2 cut(s) | 1143, 1485 |
| PkrI | GCNGC | 8 cut(s) | 155, 166, 776, 813, 816, 872, 985, 1263 |
| PleI | GAGTC | 2 cut(s) | 250, 484 |
| PpsI | GAGTC | 2 cut(s) | 250, 484 |
| Ppu21I | YACGTR | 1 cut(s) | 802 |
| PpuMI | RGGWCCY | 1 cut(s) | 114 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1373 |
| PshBI | ATTAAT | 1 cut(s) | 366 |
| Psp124BI | GAGCTC | 1 cut(s) | 1353 |
| Psp5II | RGGWCCY | 1 cut(s) | 114 |
| Psp6I | CCWGG | 3 cut(s) | 1302, 1485, 1495 |
| PspFI | CCCAGC | 1 cut(s) | 1257 |
| PspGI | CCWGG | 3 cut(s) | 1302, 1485, 1495 |
| PspLI | CGTACG | 1 cut(s) | 597 |
| PspPI | GGNCC | 3 cut(s) | 114, 902, 1281 |
| PspPPI | RGGWCCY | 1 cut(s) | 114 |
| PspXI | VCTCGAGB | 1 cut(s) | 744 |
| PstI | CTGCAG | 1 cut(s) | 816 |
| PvuII | CAGCTG | 3 cut(s) | 629, 811, 1261 |
| RsaI | GTAC | 5 cut(s) | 251, 599, 724, 942, 1083 |
| RsaNI | GTAC | 5 cut(s) | 250, 598, 723, 941, 1082 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1395 |
| SacI | GAGCTC | 1 cut(s) | 1353 |
| SalI | GTCGAC | 1 cut(s) | 1424 |
| SaqAI | TTAA | 8 cut(s) | 366, 467, 890, 950, 1277, 1452, 1523, 1557 |
| SatI | GCNGC | 8 cut(s) | 154, 165, 775, 812, 815, 871, 984, 1262 |
| Sau3AI | GATC | 4 cut(s) | 353, 631, 660, 1475 |
| Sau96I | GGNCC | 3 cut(s) | 114, 902, 1281 |
| ScaI | AGTACT | 1 cut(s) | 251 |
| SchI | GAGTC | 2 cut(s) | 251, 484 |
| ScrFI | CCNGG | 4 cut(s) | 1145, 1304, 1487, 1497 |
| SduI | GDGCHC | 2 cut(s) | 1353, 1548 |
| SfaNI | GCATC | 4 cut(s) | 31, 430, 480, 1323 |
| SfcI | CTRYAG | 2 cut(s) | 726, 812 |
| Sfr274I | CTCGAG | 1 cut(s) | 744 |
| SfuI | TTCGAA | 1 cut(s) | 1021 |
| SinI | GGWCC | 3 cut(s) | 114, 902, 1281 |
| SlaI | CTCGAG | 1 cut(s) | 744 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1395 |
| SmlI | CTYRAG | 5 cut(s) | 744, 906, 1265, 1276, 1459 |
| SmoI | CTYRAG | 5 cut(s) | 744, 906, 1265, 1276, 1459 |
| SsiI | CCGC | 4 cut(s) | 138, 149, 644, 935 |
| SspMI | CTAG | 5 cut(s) | 161, 347, 462, 516, 591 |
| SstI | GAGCTC | 1 cut(s) | 1353 |
| StyD4I | CCNGG | 4 cut(s) | 1143, 1302, 1485, 1495 |
| StyI | CCWWGG | 3 cut(s) | 494, 1396, 1540 |
| TaaI | ACNGT | 4 cut(s) | 667, 685, 1342, 1375 |
| TaiI | ACGT | 1 cut(s) | 804 |
| TaqI | TCGA | 9 cut(s) | 96, 120, 311, 745, 779, 945, 1021, 1310, 1425 |
| TatI | WGTACW | 2 cut(s) | 249, 1081 |
| TfiI | GAWTC | 6 cut(s) | 258, 458, 756, 993, 1148, 1490 |
| Tru1I | TTAA | 8 cut(s) | 366, 467, 890, 950, 1277, 1452, 1523, 1557 |
| Tru9I | TTAA | 8 cut(s) | 366, 467, 890, 950, 1277, 1452, 1523, 1557 |
| TscAI | CASTG | 4 cut(s) | 151, 195, 1206, 1425 |
| TseFI | GTSAC | 1 cut(s) | 1201 |
| TseI | GCWGC | 8 cut(s) | 153, 164, 774, 811, 814, 870, 983, 1261 |
| Tsp45I | GTSAC | 1 cut(s) | 1201 |
| TspDTI | ATGAA | 8 cut(s) | 6, 223, 294, 462, 748, 807, 822, 1060 |
| TspGWI | ACGGA | 1 cut(s) | 1141 |
| TspRI | CASTG | 4 cut(s) | 151, 195, 1206, 1425 |
| Vha464I | CTTAAG | 1 cut(s) | 1276 |
| VpaK11BI | GGWCC | 3 cut(s) | 114, 902, 1281 |
| VspI | ATTAAT | 1 cut(s) | 366 |
| XapI | RAATTY | 5 cut(s) | 182, 534, 1016, 1067, 1551 |
| XbaI | TCTAGA | 1 cut(s) | 461 |
| XceI | RCATGY | 1 cut(s) | 506 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1397 |
| XhoI | CTCGAG | 1 cut(s) | 744 |
| XmiI | GTMKAC | 1 cut(s) | 1425 |
| XspI | CTAG | 5 cut(s) | 161, 347, 462, 516, 591 |
| ZrmI | AGTACT | 1 cut(s) | 251 |