TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| FAE1_CUT1_RppA | PF08392 | 39 - 111 | 5.8e-17 | FAE1/Type III polyketide synthase-like protein |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 155 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 245 |
| Acc36I | ACCTGC | 1 cut(s) | 155 |
| AciI | CCGC | 2 cut(s) | 172, 314 |
| AclWI | GGATC | 2 cut(s) | 283, 304 |
| AcsI | RAATTY | 1 cut(s) | 110 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 250 |
| AflIII | ACRYGT | 1 cut(s) | 199 |
| AjnI | CCWGG | 1 cut(s) | 160 |
| AluBI | AGCT | 2 cut(s) | 77, 208 |
| AluI | AGCT | 2 cut(s) | 77, 208 |
| Alw26I | GTCTC | 1 cut(s) | 275 |
| AlwI | GGATC | 2 cut(s) | 283, 304 |
| ApeKI | GCWGC | 1 cut(s) | 13 |
| ApoI | RAATTY | 1 cut(s) | 110 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 48 |
| AsuHPI | GGTGA | 1 cut(s) | 136 |
| BauI | CACGAG | 2 cut(s) | 305, 318 |
| BciT130I | CCWGG | 1 cut(s) | 162 |
| BclI | TGATCA | 1 cut(s) | 90 |
| BcoDI | GTCTC | 1 cut(s) | 275 |
| BfmI | CTRYAG | 1 cut(s) | 39 |
| BfuAI | ACCTGC | 1 cut(s) | 155 |
| BisI | GCNGC | 1 cut(s) | 14 |
| BlsI | GCNGC | 1 cut(s) | 15 |
| Bme1390I | CCNGG | 1 cut(s) | 162 |
| BmiI | GGNNCC | 2 cut(s) | 82, 177 |
| BmrFI | CCNGG | 1 cut(s) | 162 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 250 |
| Bse3DI | GCAATG | 1 cut(s) | 299 |
| BseBI | CCWGG | 1 cut(s) | 162 |
| BseGI | GGATG | 2 cut(s) | 116, 337 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 250 |
| BseMI | GCAATG | 1 cut(s) | 299 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 250 |
| BsmAI | GTCTC | 1 cut(s) | 275 |
| Bsp143I | GATC | 4 cut(s) | 90, 263, 275, 309 |
| BspACI | CCGC | 2 cut(s) | 172, 314 |
| BspLI | GGNNCC | 2 cut(s) | 82, 177 |
| BspMI | ACCTGC | 1 cut(s) | 155 |
| BspPI | GGATC | 2 cut(s) | 283, 304 |
| BsrDI | GCAATG | 1 cut(s) | 299 |
| BssMI | GATC | 4 cut(s) | 90, 263, 275, 309 |
| BssSI | CACGAG | 2 cut(s) | 305, 318 |
| Bst2BI | CACGAG | 2 cut(s) | 305, 318 |
| Bst2UI | CCWGG | 1 cut(s) | 162 |
| Bst4CI | ACNGT | 1 cut(s) | 97 |
| BstC8I | GCNNGC | 1 cut(s) | 290 |
| BstDEI | CTNAG | 1 cut(s) | 17 |
| BstF5I | GGATG | 2 cut(s) | 116, 337 |
| BstKTI | GATC | 4 cut(s) | 93, 266, 278, 312 |
| BstMAI | GTCTC | 1 cut(s) | 275 |
| BstMBI | GATC | 4 cut(s) | 90, 263, 275, 309 |
| BstNI | CCWGG | 1 cut(s) | 162 |
| BstNSI | RCATGY | 1 cut(s) | 203 |
| BstSCI | CCNGG | 1 cut(s) | 160 |
| BstSFI | CTRYAG | 1 cut(s) | 39 |
| BstX2I | RGATCY | 1 cut(s) | 309 |
| BstYI | RGATCY | 1 cut(s) | 309 |
| BtsCI | GGATG | 2 cut(s) | 116, 337 |
| BveI | ACCTGC | 1 cut(s) | 155 |
| Cac8I | GCNNGC | 1 cut(s) | 290 |
| CviAII | CATG | 1 cut(s) | 200 |
| CviJI | RGCY | 3 cut(s) | 13, 77, 208 |
| CviKI_1 | RGCY | 3 cut(s) | 13, 77, 208 |
| DdeI | CTNAG | 1 cut(s) | 17 |
| DpnI | GATC | 4 cut(s) | 92, 265, 277, 311 |
| DpnII | GATC | 4 cut(s) | 90, 263, 275, 309 |
| DraI | TTTAAA | 1 cut(s) | 108 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 245 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 245 |
| EcoRII | CCWGG | 1 cut(s) | 160 |
| FaeI | CATG | 1 cut(s) | 203 |
| FaiI | YATR | 2 cut(s) | 130, 201 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 173, 205 |
| FatI | CATG | 1 cut(s) | 199 |
| FauI | CCCGC | 2 cut(s) | 165, 321 |
| FbaI | TGATCA | 1 cut(s) | 90 |
| Fnu4HI | GCNGC | 1 cut(s) | 14 |
| FokI | GGATG | 1 cut(s) | 103 |
| Fsp4HI | GCNGC | 1 cut(s) | 14 |
| GluI | GCNGC | 1 cut(s) | 14 |
| Hin1II | CATG | 1 cut(s) | 203 |
| HinfI | GANTC | 1 cut(s) | 44 |
| HphI | GGTGA | 1 cut(s) | 136 |
| Hpy188I | TCNGA | 2 cut(s) | 54, 280 |
| HpyAV | CCTTC | 1 cut(s) | 70 |
| HpyCH4III | ACNGT | 1 cut(s) | 97 |
| HpyCH4IV | ACGT | 1 cut(s) | 216 |
| HpyCH4V | TGCA | 2 cut(s) | 288, 304 |
| HpyF3I | CTNAG | 1 cut(s) | 17 |
| HpySE526I | ACGT | 1 cut(s) | 216 |
| Hsp92II | CATG | 1 cut(s) | 203 |
| Ksp22I | TGATCA | 1 cut(s) | 90 |
| Kzo9I | GATC | 4 cut(s) | 90, 263, 275, 309 |
| LpnPI | CCDG | 5 cut(s) | 63, 147, 160, 174, 252 |
| MaeII | ACGT | 1 cut(s) | 216 |
| MaeIII | GTNAC | 1 cut(s) | 34 |
| MalI | GATC | 4 cut(s) | 92, 265, 277, 311 |
| MboI | GATC | 4 cut(s) | 90, 263, 275, 309 |
| MflI | RGATCY | 1 cut(s) | 309 |
| MluCI | AATT | 2 cut(s) | 110, 135 |
| MnlI | CCTC | 4 cut(s) | 117, 168, 223, 327 |
| MroXI | GAANNNNTTC | 1 cut(s) | 48 |
| MseI | TTAA | 1 cut(s) | 107 |
| MspR9I | CCNGG | 1 cut(s) | 162 |
| MvaI | CCWGG | 1 cut(s) | 162 |
| NdeII | GATC | 4 cut(s) | 90, 263, 275, 309 |
| NlaIII | CATG | 1 cut(s) | 203 |
| NlaIV | GGNNCC | 2 cut(s) | 82, 177 |
| NmuCI | GTSAC | 1 cut(s) | 34 |
| NspI | RCATGY | 1 cut(s) | 203 |
| PaqCI | CACCTGC | 1 cut(s) | 155 |
| PciI | ACATGT | 1 cut(s) | 199 |
| PdmI | GAANNNNTTC | 1 cut(s) | 48 |
| PfeI | GAWTC | 1 cut(s) | 44 |
| PkrI | GCNGC | 1 cut(s) | 15 |
| PscI | ACATGT | 1 cut(s) | 199 |
| Psp6I | CCWGG | 1 cut(s) | 160 |
| PspGI | CCWGG | 1 cut(s) | 160 |
| PspN4I | GGNNCC | 2 cut(s) | 82, 177 |
| PsuI | RGATCY | 1 cut(s) | 309 |
| SaqAI | TTAA | 1 cut(s) | 107 |
| SatI | GCNGC | 1 cut(s) | 14 |
| Sau3AI | GATC | 4 cut(s) | 90, 263, 275, 309 |
| ScrFI | CCNGG | 1 cut(s) | 162 |
| SetI | ASST | 5 cut(s) | 79, 149, 210, 219, 255 |
| SfcI | CTRYAG | 1 cut(s) | 39 |
| Sse9I | AATT | 2 cut(s) | 110, 135 |
| SsiI | CCGC | 2 cut(s) | 172, 314 |
| StyD4I | CCNGG | 1 cut(s) | 160 |
| TaaI | ACNGT | 1 cut(s) | 97 |
| TaiI | ACGT | 1 cut(s) | 219 |
| TaqI | TCGA | 2 cut(s) | 195, 237 |
| TasI | AATT | 2 cut(s) | 110, 135 |
| TfiI | GAWTC | 1 cut(s) | 44 |
| Tru1I | TTAA | 1 cut(s) | 107 |
| Tru9I | TTAA | 1 cut(s) | 107 |
| TseFI | GTSAC | 1 cut(s) | 34 |
| TseI | GCWGC | 1 cut(s) | 13 |
| Tsp45I | GTSAC | 1 cut(s) | 34 |
| TspDTI | ATGAA | 2 cut(s) | 181, 288 |
| XapI | RAATTY | 1 cut(s) | 110 |
| XceI | RCATGY | 1 cut(s) | 203 |
| XmnI | GAANNNNTTC | 1 cut(s) | 48 |