Rh1CG186700

TMV resistance protein N-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1C
OG0000036
Physical Location & Seq
Forward (+)
40740361 .. 40762722
22362 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1CG186700.1

Sequence Viewer

Length: 2031 bp
ATGCGCTTCTTTTCCTTCAACCGCAACAATGATATCCTTAAGCCTCACCCTCAATTGGCTGCACCTAAACGACTCGTCATTGGCGGTTTTTCTGGGCAAGCATCTCCAAGAACTGAACGTGCTGTGCTACTCCTTGATGTCGTATCATGTCCTTGCTTCCATTGGAGAGACTTGCCCCAATCTCAGGGTGCTTGTGCTAGAATTGTAGACCAGGAATCACCTGAAGCTTTTAAGATCAACCTGGACAGAATGCTTAATGGTTGTTTATGCTTGGAGGGCAGTTTGTTATACACTGCTTATGGTTCAAATGGTCAGTGGGGCTTATTTGAGAGGAATTTTGGAAGGACAGATACCCAAGAGCCAGATCCAGAGGGAAGGGTTCCCCAGTGGGACAAAGCATGTGTTCAAGAAATGAAAGACAAGTTTTCTGCCGTTGGCTTTGGCCCTCGCCAGCATCTCAGTTCTCATTGTTGGGTGGTCAAGTTGGGGAGTTATTTGCCAGGCTCTTTACTATCATTAAGTCTAAGTGGGTGCAATCTTTCTGATGATGCTTTTCCTGTGGATTTCACTAGCCCTTCCTCTCTGGGAAGTTTAAATCTAAGTGATAATCCAATAACTGGCCTACCCAATTGCGTCAAGGGTCTGACAAGTCTAGATGAACTCTCCTTTTACAACTGTGAGCCTCGAATCCCTTGTAGAGCTACCAAAAGTAGGTTTCAAGTTGAATGTATCCGGTTGCGAAGCATTGGTAAGAATAACATATCAGTCAAACTCCTGTCATCCTGTGCCCAATTTCCACGCCTGAGTGGTAAGAACTACAGCCTAGTTGAGTGGGAATATGAATATAAGTTAGAACCCATTGGAAAAGTTGATGCAGAATTGCTCAAACTTTTGGGCTTGAGCAACTTGGACCTTGAATGCAGGCCAACCATTCGGTTGTGCGCAAAATATACTGGTTACGACATAATTCATCATGGTGGAATACAGGGACTGCATGAGTATGGTTGTACAAACTCTTACTTCCGAGGAAATGCAAGAAAGATAGACATGTTTAGTACATTTCTTCCTGGGAATGAGGTTCCAGGCCAATTCAGCCATAGAACTAAAGGCTCTTCCTCAATATCATTATCTGTGCCTTTGCCTTCCGCTCATGATCTCAGAATCCGAGGCTTTAACATCTTCATTGTCTATGCAATTTTAGACAATGACGATGAAAGATATTCTTCATGTACTGACCAGGGTTCAATAACTATCAAAGTCATAAATGAGAGCGACGACAGCAACTGGCATCATGAGCCAATATATCACGGTATTCCGGGTAAGGGAGAAGACATGATATGGTTAACCCATTGGAATATGGAGAATCAAGTAAAAGGTAGGGATCAAGTGGCTGTTTCACTCTCGGTAAAACATGCAAGGTTTCGGTATCAGGTAAAGGAGTGGGGGATCCAGGTTGTACAGGAGAAGCAAGAAGGTAAGATGTGTACCGACCACTACACCACAAATCCCATTTGTTTTCCATGTGCCACTGGTGGAGATTTGTTAACATCTGATGAGCCGTTGAGGGGAACATACTTGCTGTCCTATGAACCTGATTCAACGGTAGATAAAGATAAAAAAGGAGATGATGAAGAAGAGGCAGTGGGTGATCCTATTCCTGCATCAGCAATGGGGGATGGCAGCAACAACAGTGATCGGGGTCTCAGAAAGTGGAAGGTGCTCATCATTGCCGCTATCATCCTTGCTGCTGCCATCAGCGCTGCTCATCGTTTTGAAGACTCTGCTCTAGACACAAATTTAGCTGAAACTGTCACTAATGCAGACAATGAAGAAGAACAACGGGATGAAGATGACAAGCTTGCAACAGCGACCAATACTGACGGCAGTAACAACCGTGCGCGGGATCCCAGAAAGTGGAAGGTGCTCATCATTGCTGCTGTCATGTTAATTCTCTGTTCATCTGTTCGCTGGTTCTTCTTTTTCTCCGCCAGAGACAGATACATGGAGTCTAATATTTTGGTTCCTACATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_8 NB-ARC TIR

Protein Analysis

676

Amino Acids

75.5

Weight (kDa)

5.74

Isoelectric Point (pI)

32.38

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000036)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G57630 AT1G72930 AT5G38344
fragaria_vesca FvH4_1g27020 FvH4_2g00931 FvH4_2g17330 FvH4_2g17330 FvH4_2g17340 FvH4_2g17350 FvH4_2g20690 FvH4_5g15301 FvH4_5g34194 FvH4_5g38530 FvH4_5g38740 FvH4_5g38740 FvH4_5g38740 FvH4_6g03800 FvH4_7g09791 FvH4_7g09800 FvH4_7g09800 FvH4_7g10510 FvH4_7g10520 FvH4_7g10520 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750
malus_domestica MD02G1217100.v1.1 MD02G1217200.v1.1 MD02G1217400.v1.1 MD02G1217600.v1.1 MD02G1264800.v1.1 MD02G1264900.v1.1 MD02G1302100.v1.1 MD04G1010700.v1.1 MD05G1006800.v1.1 MD05G1140100.v1.1 MD05G1140200.v1.1 MD05G1152200.v1.1 MD07G1073500.v1.1 MD07G1101700.v1.1 MD07G1102200.v1.1 MD07G1103200.v1.1 MD07G1112300.v1.1 MD08G1018200.v1.1 MD08G1018400.v1.1 MD08G1018800.v1.1 MD08G1019000.v1.1 MD08G1019100.v1.1 MD08G1019200.v1.1 MD08G1019300.v1.1 MD08G1019400.v1.1 MD08G1019600.v1.1 MD08G1019900.v1.1 MD08G1020000.v1.1 MD08G1020200.v1.1 MD08G1020500.v1.1 MD08G1020700.v1.1 MD08G1020800.v1.1 MD08G1040700.v1.1 MD11G1112400.v1.1 MD12G1068600.v1.1 MD12G1193200.v1.1 MD13G1050600.v1.1 MD15G1374900.v1.1 MD15G1375100.v1.1 MD15G1416500.v1.1 MD17G1072500.v1.1 MD17G1274200.v1.1 MD17G1274900.v1.1
prunus_persica Prupe.2G121000_v2.0.a1 Prupe.2G121000_v2.0.a1 Prupe.2G125800_v2.0.a1 Prupe.2G126000_v2.0.a1 Prupe.2G126100_v2.0.a1 Prupe.2G126200_v2.0.a1 Prupe.2G126300_v2.0.a1 Prupe.2G126400_v2.0.a1 Prupe.2G126500_v2.0.a1 Prupe.2G126600_v2.0.a1 Prupe.2G126700_v2.0.a1 Prupe.2G126700_v2.0.a1 Prupe.2G126800_v2.0.a1 Prupe.2G126900_v2.0.a1 Prupe.2G127000_v2.0.a1 Prupe.2G127000_v2.0.a1 Prupe.2G127000_v2.0.a1 Prupe.2G127000_v2.0.a1 Prupe.2G135500_v2.0.a1 Prupe.2G135600_v2.0.a1 Prupe.2G135700_v2.0.a1 Prupe.2G135700_v2.0.a1 Prupe.3G009800_v2.0.a1 Prupe.3G010200_v2.0.a1 Prupe.3G131000_v2.0.a1 Prupe.4G260800_v2.0.a1 Prupe.4G260900_v2.0.a1 Prupe.6G083100_v2.0.a1 Prupe.6G083200_v2.0.a1 Prupe.6G083400_v2.0.a1 Prupe.6G132100_v2.0.a1 Prupe.8G184900_v2.0.a1 Prupe.8G185200_v2.0.a1 Prupe.8G185300_v2.0.a1
pyrus_communis pycom02g17870 pycom02g17880 pycom02g19520 pycom02g22610 pycom02g22630 pycom02g22680 pycom05g13540 pycom05g14680 pycom07g04880 pycom07g04890 pycom07g05690 pycom07g05710 pycom07g05720 pycom07g05750 pycom07g05780 pycom07g06300 pycom07g08320 pycom07g08330 pycom07g08350 pycom07g08360 pycom07g08370 pycom07g08410 pycom07g08420 pycom07g08430 pycom07g08440 pycom07g08470 pycom07g08480 pycom07g08520 pycom07g08550 pycom07g08560 pycom07g08640 pycom07g08660 pycom07g08670 pycom07g08680 pycom07g08690 pycom07g08720 pycom07g08730 pycom07g08790 pycom07g08800 pycom07g08810 pycom07g08860 pycom07g08890 pycom07g09720 pycom08g01590 pycom08g01600 pycom08g01620 pycom08g01630 pycom08g01640 pycom10g12630 pycom15g16490 pycom17g07200 pycom17g07210 pycom17g07220 pycom17g11730 pycom17g11740 pycom17g27340 pycom17g27380
rosa_chinensis RchiOBHm_Chr1g0342571 RchiOBHm_Chr1g0346231 RchiOBHm_Chr1g0346831 RchiOBHm_Chr1g0346891 RchiOBHm_Chr1g0348311 RchiOBHm_Chr1g0348321 RchiOBHm_Chr1g0348331 RchiOBHm_Chr1g0348361 RchiOBHm_Chr1g0348371 RchiOBHm_Chr1g0348381 RchiOBHm_Chr1g0348401 RchiOBHm_Chr1g0348411 RchiOBHm_Chr1g0348421 RchiOBHm_Chr1g0348431 RchiOBHm_Chr2g0130881 RchiOBHm_Chr3g0487331 RchiOBHm_Chr5g0060371 RchiOBHm_Chr6g0246491 RchiOBHm_Chr6g0246871 RchiOBHm_Chr6g0250311 RchiOBHm_Chr6g0250781 RchiOBHm_Chr6g0251431 RchiOBHm_Chr6g0281871 RchiOBHm_Chr6g0281881 RchiOBHm_Chr6g0281931 RchiOBHm_Chr6g0281941 RchiOBHm_Chr6g0281951 RchiOBHm_Chr6g0281971 RchiOBHm_Chr6g0281981 RchiOBHm_Chr7g0240541 RchiOBHm_Chr7g0240631 RchiOBHm_Chr7g0240671
rosa_laevigata RLG00000000627 RLG00000000631 RLG00000000641 RLG00000000645 RLG00000000652 RLG00000000662 RLG00000000663 RLG00000000667 RLG00000000670 RLG00000000702 RLG00000001216 RLG00000001219 RLG00000007678 RLG00000012923 RLG00000012996 RLG00000013243 RLG00000017513 RLG00000017514 RLG00000020936 RLG00000022755 RLG00000023013 RLG00000028646 RLG00000028654 RLG00000028662 RLG00000028665 RLG00000028667 RLG00000028711 RLG00000028714 RLG00000028716 RLG00000028770 RLG00000028771 RLG00000028773 RLG00000028778 RLG00000028798 RLG00000028809 RLG00000028813 RLG00000029334 RLG00000030003 RLG00000033910 RLG00000034358 RLG00000035430
rosa_multiflora Rmu_co8031134.1_g000001 Rmu_co8092796.1_g000001 Rmu_co8130156.1_g000001 Rmu_co8325323.1_g000001 Rmu_co8424083.1_g000002 Rmu_sc0000008.1_g000003 Rmu_sc0000008.1_g000011 Rmu_sc0000008.1_g000015 Rmu_sc0000008.1_g000020 Rmu_sc0000091.1_g000015 Rmu_sc0000091.1_g000018 Rmu_sc0000091.1_g000029 Rmu_sc0000091.1_g000031 Rmu_sc0000391.1_g000004 Rmu_sc0001070.1_g000030 Rmu_sc0001293.1_g000016 Rmu_sc0001674.1_g000006 Rmu_sc0001731.1_g000002 Rmu_sc0001731.1_g000003 Rmu_sc0001731.1_g000005 Rmu_sc0001911.1_g000029 Rmu_sc0001913.1_g000038 Rmu_sc0001955.1_g000025 Rmu_sc0001992.1_g000022 Rmu_sc0001992.1_g000028 Rmu_sc0001992.1_g000031 Rmu_sc0002517.1_g000013 Rmu_sc0002517.1_g000017 Rmu_sc0002551.1_g000022 Rmu_sc0002551.1_g000029 Rmu_sc0002551.1_g000038 Rmu_sc0002705.1_g000015 Rmu_sc0002705.1_g000016 Rmu_sc0002882.1_g000055 Rmu_sc0003232.1_g000027 Rmu_sc0003363.1_g000037 Rmu_sc0003600.1_g000054 Rmu_sc0003918.1_g000011 Rmu_sc0004395.1_g000011 Rmu_sc0005071.1_g000004 Rmu_sc0005255.1_g000018 Rmu_sc0005327.1_g000004 Rmu_sc0005597.1_g000007 Rmu_sc0007060.1_g000007 Rmu_sc0007310.1_g000003 Rmu_sc0007383.1_g000014 Rmu_sc0007799.1_g000003 Rmu_sc0008477.1_g000016 Rmu_sc0010151.1_g000009 Rmu_sc0011217.1_g000005 Rmu_sc0016269.1_g000006 Rmu_sc0021495.1_g000001 Rmu_sc0027364.1_g000001 Rmu_sc0029432.1_g000001 Rmu_sc0041386.1_g000001 Rmu_ssc0000126.1_g000023 Rmu_ssc0000126.1_g000027
rosa_roxburghii Rroxscaffold_1G00006130 Rroxscaffold_1G00023320 Rroxscaffold_1G00038770 Rroxscaffold_2G00119800 Rroxscaffold_2G00121860 Rroxscaffold_3G00219780 Rroxscaffold_3G00219890 Rroxscaffold_4G00306740 Rroxscaffold_4G00306820 Rroxscaffold_4G00307000 Rroxscaffold_4G00307010 Rroxscaffold_4G00307020 Rroxscaffold_4G00308030 Rroxscaffold_4G00308070 Rroxscaffold_4G00308450 Rroxscaffold_4G00308460 Rroxscaffold_4G00315320 Rroxscaffold_5G00352470 Rroxscaffold_5G00371420 Rroxscaffold_6G00392300 Rroxscaffold_6G00394870 Rroxscaffold_6G00394890 Rroxscaffold_7G00186700 Rroxscaffold_7G00194980 Rroxscaffold_7G00216840
rosa_rugosa Rorug01G0076100 Rorug01G0128100 Rorug01G0149000.1 Rorug01G0149500.1 Rorug01G0180000 Rorug01G0180100 Rorug01G0182900 Rorug01G0184000 Rorug01G0184100 Rorug01G0184300 Rorug01G0184600 Rorug01G0184700 Rorug01G0184700 Rorug01G0184900 Rorug01G0185000 Rorug01G0185100 Rorug01G0189300 Rorug01G0194100 Rorug01G0194100 Rorug01G0194200 Rorug01G0194400 Rorug01G0194400 Rorug01G0194500 Rorug02G0090400 Rorug02G0090400 Rorug03G0233000 Rorug03G0233100 Rorug05G0178600 Rorug05G0178700 Rorug05G0579200 Rorug06G0144100 Rorug06G0144300 Rorug06G0144300 Rorug06G0179300 Rorug06G0208800 Rorug07G0323500 Rorug07G0337000
rosa_samantha Rh1AG046100 Rh1AG201400 Rh1AG201800 Rh1AG202100 Rh1AG202600 Rh1AG211500 Rh1AG211800 Rh1AG212200 Rh1AG212500 Rh1AG212600 Rh1AG214200 Rh1BG168000 Rh1BG168300 Rh1BG168500 Rh1BG177900 Rh1BG178200 Rh1BG178300 Rh1BG178800 Rh1BG178900 Rh1CG080900 Rh1CG183300 Rh1CG186300 Rh1CG186700 Rh1CG187000 Rh1CG187300 Rh1CG193400 Rh1CG195800 Rh1CG196000 Rh1CG196100 Rh1CG196400 Rh1CG196500 Rh1CG196800 Rh1CG198800 Rh1CG442600 Rh1DG086200 Rh1DG155400 Rh1DG156200 Rh1DG194000 Rh1DG194300 Rh1DG194900 Rh1DG197000 Rh1DG198800 Rh1DG199000 Rh1DG199200 Rh1DG202000 Rh1DG203900 Rh1DG207600 Rh1DG207900 Rh1DG208000 Rh1DG208500 Rh1DG208600 Rh1DG208700 Rh3CG339100 Rh5AG106500 Rh5AG264800 Rh5AG265300 Rh5CG302800 Rh5DG277900 Rh6AG257600 Rh6AG257700 Rh6BG260500 Rh6BG260700 Rh6CG259600 Rh6CG259700 Rh6DG252100 Rh7DG126900
rosa_wichuraiana Rw0G005780 Rw0G007540 Rw0G007550 Rw0G007560 Rw0G009390 Rw1G016900 Rw1G016930 Rw1G016940 Rw1G016970 Rw1G017860 Rw1G017890 Rw1G017900 Rw1G017910 Rw1G017920 Rw1G017960 Rw1G017970 Rw1G017980 Rw1G018150 Rw4G000830 Rw5G009290 Rw5G018950 Rw5G024850 Rw5G024870 Rw5G040460 Rw6G022290 Rw7G041020 Rw7G041200 Rw7G041360 Rw7G041450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 943
AccB7I CCANNNNNTGG 2 cut(s) 617, 1914
AccBSI CCGCTC 1 cut(s) 1148
AccI GTMKAC 1 cut(s) 207
AccII CGCG 1 cut(s) 1900
AciI CCGC 6 cut(s) 22, 84, 1146, 1731, 1900, 1986
AclWI GGATC 7 cut(s) 359, 1389, 1441, 1454, 1643, 1898, 1911
AcsI RAATTY 2 cut(s) 334, 1795
AcuI CTGAAG 1 cut(s) 243
AfaI GTAC 5 cut(s) 1009, 1057, 1231, 1458, 1486
AfeI AGCGCT 1 cut(s) 1759
AfiI CCNNNNNNNGG 8 cut(s) 55, 184, 617, 711, 1322, 1565, 1900, 1914
AflII CTTAAG 1 cut(s) 38
AflIII ACRYGT 1 cut(s) 1047
AgsI TTSAA 9 cut(s) 19, 306, 407, 719, 725, 917, 1245, 1599, 1775
AjnI CCWGG 7 cut(s) 210, 240, 499, 1066, 1081, 1236, 1449
AluBI AGCT 4 cut(s) 227, 701, 1802, 1858
AluI AGCT 4 cut(s) 227, 701, 1802, 1858
Alw21I GWGCWC 2 cut(s) 1722, 1926
Alw26I GTCTC 3 cut(s) 162, 1706, 1986
AlwI GGATC 7 cut(s) 359, 1389, 1441, 1454, 1643, 1898, 1911
AlwNI CAGNNNCTG 2 cut(s) 991, 1284
Aor51HI AGCGCT 1 cut(s) 1759
AoxI GGCC 4 cut(s) 442, 619, 923, 1084
ApeKI GCWGC 6 cut(s) 59, 1680, 1745, 1748, 1760, 1934
ApoI RAATTY 2 cut(s) 334, 1795
AspLEI GCGC 4 cut(s) 6, 944, 1760, 1900
AspS9I GGNCC 2 cut(s) 443, 910
AsuC2I CCSGG 1 cut(s) 1317
AsuHPI GGTGA 3 cut(s) 38, 210, 1658
AvaII GGWCC 1 cut(s) 910
BaeGI GKGCMC 1 cut(s) 790
BamHI GGATCC 2 cut(s) 1446, 1903
BarI GAAGNNNNNNTAC 2 cut(s) 334, 366
BbsI GAAGAC 2 cut(s) 1335, 1782
Bbv12I GWGCWC 2 cut(s) 1722, 1926
BbvI GCAGC 6 cut(s) 46, 1692, 1732, 1735, 1747, 1921
BccI CCATC 2 cut(s) 1670, 1760
BceAI ACGGC 3 cut(s) 416, 1543, 1897
BciT130I CCWGG 7 cut(s) 212, 242, 501, 1068, 1083, 1238, 1451
BciVI GTATCC 1 cut(s) 740
BcnI CCSGG 1 cut(s) 1317
BcoDI GTCTC 3 cut(s) 162, 1706, 1986
BfaI CTAG 5 cut(s) 198, 570, 653, 824, 1787
BfmI CTRYAG 1 cut(s) 817
BfoI RGCGCY 1 cut(s) 1761
BfrI CTTAAG 1 cut(s) 38
BfuI GTATCC 1 cut(s) 740
BisI GCNGC 7 cut(s) 60, 1681, 1731, 1746, 1749, 1761, 1935
BlsI GCNGC 7 cut(s) 61, 1682, 1732, 1747, 1750, 1762, 1936
Bme1390I CCNGG 8 cut(s) 212, 242, 501, 1068, 1083, 1238, 1317, 1451
Bme18I GGWCC 1 cut(s) 910
BmgT120I GGNCC 2 cut(s) 443, 910
BmiI GGNNCC 5 cut(s) 381, 1080, 1448, 1905, 2022
BmrFI CCNGG 8 cut(s) 212, 242, 501, 1068, 1083, 1238, 1317, 1451
BmrI ACTGGG 1 cut(s) 379
BmsI GCATC 6 cut(s) 110, 463, 538, 862, 1297, 1670
BmuI ACTGGG 1 cut(s) 379
BpiI GAAGAC 2 cut(s) 1335, 1782
BpuEI CTTGAG 1 cut(s) 919
BpuMI CCSGG 1 cut(s) 1317
BsaI GGTCTC 1 cut(s) 1706
BsaJI CCNNGG 4 cut(s) 1024, 1067, 1165, 1237
BsaWI WCCGGW 1 cut(s) 732
Bsc4I CCNNNNNNNGG 8 cut(s) 55, 184, 617, 711, 1322, 1565, 1900, 1914
Bse1I ACTGG 5 cut(s) 385, 622, 958, 1289, 1534
Bse3DI GCAATG 3 cut(s) 1674, 1725, 1929
BseBI CCWGG 7 cut(s) 212, 242, 501, 1068, 1083, 1238, 1451
BseDI CCNNGG 4 cut(s) 1024, 1067, 1165, 1237
BseGI GGATG 4 cut(s) 779, 1681, 1737, 1849
BseLI CCNNNNNNNGG 8 cut(s) 55, 184, 617, 711, 1322, 1565, 1900, 1914
BseMI GCAATG 3 cut(s) 1674, 1725, 1929
BseMII CTCAG 5 cut(s) 197, 472, 794, 1171, 1717
BseNI ACTGG 5 cut(s) 385, 622, 958, 1289, 1534
BseSI GKGCMC 1 cut(s) 790
BseXI GCAGC 6 cut(s) 46, 1692, 1732, 1735, 1747, 1921
BsgI GTGCAG 1 cut(s) 45
Bsh1236I CGCG 1 cut(s) 1900
BshFI GGCC 4 cut(s) 444, 621, 925, 1086
BsiHKAI GWGCWC 2 cut(s) 1722, 1926
BsiSI CCGG 2 cut(s) 733, 1316
BslFI GGGAC 2 cut(s) 404, 1002
BslI CCNNNNNNNGG 8 cut(s) 55, 184, 617, 711, 1322, 1565, 1900, 1914
BsmAI GTCTC 3 cut(s) 162, 1706, 1986
BsmFI GGGAC 2 cut(s) 404, 1002
BsmI GAATGC 2 cut(s) 255, 923
BsnI GGCC 4 cut(s) 444, 621, 925, 1086
Bso31I GGTCTC 1 cut(s) 1706
Bsp1286I GDGCHC 3 cut(s) 790, 1722, 1926
Bsp1407I TGTACA 2 cut(s) 1007, 1456
Bsp143I GATC 8 cut(s) 234, 364, 1153, 1381, 1446, 1648, 1693, 1903
BspACI CCGC 6 cut(s) 22, 84, 1146, 1731, 1900, 1986
BspANI GGCC 4 cut(s) 444, 621, 925, 1086
BspCNI CTCAG 5 cut(s) 196, 471, 795, 1170, 1716
BspFNI CGCG 1 cut(s) 1900
BspHI TCATGA 2 cut(s) 1150, 1291
BspLI GGNNCC 5 cut(s) 381, 1080, 1448, 1905, 2022
BspPI GGATC 7 cut(s) 359, 1389, 1441, 1454, 1643, 1898, 1911
BspQI GCTCTTC 1 cut(s) 1117
BspTI CTTAAG 1 cut(s) 38
BspTNI GGTCTC 1 cut(s) 1706
BsrBI CCGCTC 1 cut(s) 1148
BsrDI GCAATG 3 cut(s) 1674, 1725, 1929
BsrGI TGTACA 2 cut(s) 1007, 1456
BsrI ACTGG 5 cut(s) 385, 622, 958, 1289, 1534
BssECI CCNNGG 4 cut(s) 1024, 1067, 1165, 1237
BssMI GATC 8 cut(s) 234, 364, 1153, 1381, 1446, 1648, 1693, 1903
Bst2UI CCWGG 7 cut(s) 212, 242, 501, 1068, 1083, 1238, 1451
Bst4CI ACNGT 6 cut(s) 677, 1310, 1603, 1691, 1810, 1895
Bst6I CTCTTC 2 cut(s) 1117, 1629
BstAFI CTTAAG 1 cut(s) 38
BstAUI TGTACA 2 cut(s) 1007, 1456
BstC8I GCNNGC 4 cut(s) 99, 452, 923, 1860
BstDEI CTNAG 7 cut(s) 183, 458, 524, 599, 803, 1157, 1703
BstF5I GGATG 4 cut(s) 779, 1681, 1737, 1849
BstFNI CGCG 1 cut(s) 1900
BstH2I RGCGCY 1 cut(s) 1761
BstHHI GCGC 4 cut(s) 6, 944, 1760, 1900
BstKTI GATC 8 cut(s) 237, 367, 1156, 1384, 1449, 1651, 1696, 1906
BstMAI GTCTC 3 cut(s) 162, 1706, 1986
BstMBI GATC 8 cut(s) 234, 364, 1153, 1381, 1446, 1648, 1693, 1903
BstMWI GCNNNNNNNGC 5 cut(s) 276, 1092, 1278, 1294, 1757
BstNI CCWGG 7 cut(s) 212, 242, 501, 1068, 1083, 1238, 1451
BstNSI RCATGY 3 cut(s) 402, 1051, 1415
BstSCI CCNGG 8 cut(s) 210, 240, 499, 1066, 1081, 1236, 1315, 1449
BstSFI CTRYAG 1 cut(s) 817
BstSLI GKGCMC 1 cut(s) 790
BstUI CGCG 1 cut(s) 1900
BstV1I GCAGC 6 cut(s) 46, 1692, 1732, 1735, 1747, 1921
BstV2I GAAGAC 2 cut(s) 1335, 1782
BstX2I RGATCY 3 cut(s) 364, 1446, 1903
BstYI RGATCY 3 cut(s) 364, 1446, 1903
BsuI GTATCC 1 cut(s) 740
BsuRI GGCC 4 cut(s) 444, 621, 925, 1086
BtsCI GGATG 4 cut(s) 779, 1681, 1737, 1849
BtsI GCAGTG 2 cut(s) 291, 1647
BtsIMutI CAGTG 6 cut(s) 291, 320, 392, 1527, 1647, 1696
Cac8I GCNNGC 4 cut(s) 99, 452, 923, 1860
CaiI CAGNNNCTG 2 cut(s) 991, 1284
CciI TCATGA 2 cut(s) 1150, 1291
CfoI GCGC 4 cut(s) 6, 944, 1760, 1900
Cfr13I GGNCC 2 cut(s) 443, 910
CseI GACGC 1 cut(s) 622
Csp6I GTAC 5 cut(s) 1008, 1056, 1230, 1457, 1485
CviQI GTAC 5 cut(s) 1008, 1056, 1230, 1457, 1485
DdeI CTNAG 7 cut(s) 183, 458, 524, 599, 803, 1157, 1703
DpnI GATC 8 cut(s) 236, 366, 1155, 1383, 1448, 1650, 1695, 1905
DpnII GATC 8 cut(s) 234, 364, 1153, 1381, 1446, 1648, 1693, 1903
DraI TTTAAA 1 cut(s) 594
Eam1104I CTCTTC 2 cut(s) 1117, 1629
EarI CTCTTC 2 cut(s) 1117, 1629
EciI GGCGGA 1 cut(s) 1975
Eco31I GGTCTC 1 cut(s) 1706
Eco32I GATATC 1 cut(s) 34
Eco47I GGWCC 1 cut(s) 910
Eco47III AGCGCT 1 cut(s) 1759
Eco57I CTGAAG 1 cut(s) 243
EcoRII CCWGG 7 cut(s) 210, 240, 499, 1066, 1081, 1236, 1449
EcoRV GATATC 1 cut(s) 34
FalI AAGNNNNNCTT 2 cut(s) 1207, 1239
FaqI GGGAC 2 cut(s) 404, 1002
FauI CCCGC 1 cut(s) 1893
FblI GTMKAC 1 cut(s) 207
Fnu4HI GCNGC 7 cut(s) 60, 1681, 1731, 1746, 1749, 1761, 1935
FokI GGATG 4 cut(s) 766, 1688, 1724, 1856
Fsp4HI GCNGC 7 cut(s) 60, 1681, 1731, 1746, 1749, 1761, 1935
FspBI CTAG 5 cut(s) 198, 570, 653, 824, 1787
FspI TGCGCA 1 cut(s) 943
GlaI GCGC 4 cut(s) 5, 943, 1759, 1899
GluI GCNGC 7 cut(s) 60, 1681, 1731, 1746, 1749, 1761, 1935
HaeII RGCGCY 1 cut(s) 1761
HaeIII GGCC 4 cut(s) 444, 621, 925, 1086
HapII CCGG 2 cut(s) 733, 1316
HgaI GACGC 1 cut(s) 622
HhaI GCGC 4 cut(s) 6, 944, 1760, 1900
Hin6I GCGC 4 cut(s) 4, 942, 1758, 1898
HinP1I GCGC 4 cut(s) 4, 942, 1758, 1898
HincII GTYRAC 2 cut(s) 1344, 1545
HindII GTYRAC 2 cut(s) 1344, 1545
HindIII AAGCTT 2 cut(s) 225, 1856
HinfI GANTC 8 cut(s) 72, 215, 687, 1161, 1363, 1595, 1778, 2006
HpaI GTTAAC 2 cut(s) 1344, 1545
HpaII CCGG 2 cut(s) 733, 1316
HphI GGTGA 3 cut(s) 38, 210, 1658
Hpy166II GTNNAC 4 cut(s) 208, 1344, 1485, 1545
Hpy188I TCNGA 7 cut(s) 544, 645, 1025, 1160, 1166, 1552, 1706
Hpy188III TCNNGA 6 cut(s) 368, 407, 653, 1151, 1292, 1787
Hpy8I GTNNAC 4 cut(s) 208, 1344, 1485, 1545
Hpy99I CGWCG 1 cut(s) 1277
HpyAV CCTTC 8 cut(s) 25, 336, 369, 585, 1152, 1466, 1708, 1912
HpyCH4III ACNGT 6 cut(s) 677, 1310, 1603, 1691, 1810, 1895
HpyCH4IV ACGT 1 cut(s) 118
HpyF10VI GCNNNNNNNGC 5 cut(s) 276, 1092, 1278, 1294, 1757
HpyF3I CTNAG 7 cut(s) 183, 458, 524, 599, 803, 1157, 1703
HpySE526I ACGT 1 cut(s) 118
HspAI GCGC 4 cut(s) 4, 942, 1758, 1898
KspAI GTTAAC 2 cut(s) 1344, 1545
Kzo9I GATC 8 cut(s) 234, 364, 1153, 1381, 1446, 1648, 1693, 1903
LguI GCTCTTC 1 cut(s) 1117
Lsp1109I GCAGC 6 cut(s) 46, 1692, 1732, 1735, 1747, 1921
LweI GCATC 6 cut(s) 110, 463, 538, 862, 1297, 1670
MaeI CTAG 5 cut(s) 198, 570, 653, 824, 1787
MaeII ACGT 1 cut(s) 118
MaeIII GTNAC 3 cut(s) 956, 1810, 1886
MalI GATC 8 cut(s) 236, 366, 1155, 1383, 1448, 1650, 1695, 1905
MbiI CCGCTC 1 cut(s) 1148
MboI GATC 8 cut(s) 234, 364, 1153, 1381, 1446, 1648, 1693, 1903
MfeI CAATTG 2 cut(s) 53, 628
MflI RGATCY 3 cut(s) 364, 1446, 1903
MhlI GDGCHC 3 cut(s) 790, 1722, 1926
MlyI GAGTC 3 cut(s) 66, 1772, 2015
MseI TTAA 9 cut(s) 39, 231, 255, 518, 593, 1173, 1343, 1544, 1946
MslI CAYNNNNRTG 2 cut(s) 975, 999
MspCI CTTAAG 1 cut(s) 38
MspI CCGG 2 cut(s) 733, 1316
MspR9I CCNGG 8 cut(s) 212, 242, 501, 1068, 1083, 1238, 1317, 1451
MunI CAATTG 2 cut(s) 53, 628
Mva1269I GAATGC 2 cut(s) 255, 923
MvaI CCWGG 7 cut(s) 212, 242, 501, 1068, 1083, 1238, 1451
MvnI CGCG 1 cut(s) 1900
MwoI GCNNNNNNNGC 5 cut(s) 276, 1092, 1278, 1294, 1757
NciI CCSGG 1 cut(s) 1317
NdeII GATC 8 cut(s) 234, 364, 1153, 1381, 1446, 1648, 1693, 1903
NlaIV GGNNCC 5 cut(s) 381, 1080, 1448, 1905, 2022
NmuCI GTSAC 1 cut(s) 1810
NsbI TGCGCA 1 cut(s) 943
NspI RCATGY 3 cut(s) 402, 1051, 1415
PagI TCATGA 2 cut(s) 1150, 1291
PciI ACATGT 1 cut(s) 1047
PciSI GCTCTTC 1 cut(s) 1117
PctI GAATGC 2 cut(s) 255, 923
PfeI GAWTC 5 cut(s) 215, 687, 1161, 1363, 1595
PflMI CCANNNNNTGG 2 cut(s) 617, 1914
PkrI GCNGC 7 cut(s) 61, 1682, 1732, 1747, 1750, 1762, 1936
PleI GAGTC 3 cut(s) 66, 1772, 2014
PpsI GAGTC 3 cut(s) 66, 1772, 2014
PscI ACATGT 1 cut(s) 1047
Psp6I CCWGG 7 cut(s) 210, 240, 499, 1066, 1081, 1236, 1449
PspGI CCWGG 7 cut(s) 210, 240, 499, 1066, 1081, 1236, 1449
PspN4I GGNNCC 5 cut(s) 381, 1080, 1448, 1905, 2022
PspPI GGNCC 2 cut(s) 443, 910
PstNI CAGNNNCTG 2 cut(s) 991, 1284
PsuI RGATCY 3 cut(s) 364, 1446, 1903
RsaI GTAC 5 cut(s) 1009, 1057, 1231, 1458, 1486
RsaNI GTAC 5 cut(s) 1008, 1056, 1230, 1457, 1485
RseI CAYNNNNRTG 2 cut(s) 975, 999
SapI GCTCTTC 1 cut(s) 1117
SaqAI TTAA 9 cut(s) 39, 231, 255, 518, 593, 1173, 1343, 1544, 1946
SatI GCNGC 7 cut(s) 60, 1681, 1731, 1746, 1749, 1761, 1935
Sau3AI GATC 8 cut(s) 234, 364, 1153, 1381, 1446, 1648, 1693, 1903
Sau96I GGNCC 2 cut(s) 443, 910
SchI GAGTC 3 cut(s) 66, 1772, 2015
ScrFI CCNGG 8 cut(s) 212, 242, 501, 1068, 1083, 1238, 1317, 1451
SduI GDGCHC 3 cut(s) 790, 1722, 1926
SfaNI GCATC 6 cut(s) 110, 463, 538, 862, 1297, 1670
SfcI CTRYAG 1 cut(s) 817
SinI GGWCC 1 cut(s) 910
SmiMI CAYNNNNRTG 2 cut(s) 975, 999
SmlI CTYRAG 2 cut(s) 38, 898
SmoI CTYRAG 2 cut(s) 38, 898
SsiI CCGC 6 cut(s) 22, 84, 1146, 1731, 1900, 1986
SspI AATATT 1 cut(s) 2014
SspMI CTAG 5 cut(s) 198, 570, 653, 824, 1787
StyD4I CCNGG 8 cut(s) 210, 240, 499, 1066, 1081, 1236, 1315, 1449
TaaI ACNGT 6 cut(s) 677, 1310, 1603, 1691, 1810, 1895
TaiI ACGT 1 cut(s) 121
TaqI TCGA 1 cut(s) 685
TatI WGTACW 4 cut(s) 1007, 1055, 1229, 1456
TauI GCSGC 1 cut(s) 1733
TfiI GAWTC 5 cut(s) 215, 687, 1161, 1363, 1595
Tru1I TTAA 9 cut(s) 39, 231, 255, 518, 593, 1173, 1343, 1544, 1946
Tru9I TTAA 9 cut(s) 39, 231, 255, 518, 593, 1173, 1343, 1544, 1946
TscAI CASTG 6 cut(s) 298, 320, 392, 1534, 1647, 1696
TseFI GTSAC 1 cut(s) 1810
TseI GCWGC 6 cut(s) 59, 1680, 1745, 1748, 1760, 1934
Tsp45I GTSAC 1 cut(s) 1810
TspRI CASTG 6 cut(s) 298, 320, 392, 1534, 1647, 1696
Van91I CCANNNNNTGG 2 cut(s) 617, 1914
Vha464I CTTAAG 1 cut(s) 38
VpaK11BI GGWCC 1 cut(s) 910
XapI RAATTY 2 cut(s) 334, 1795
XbaI TCTAGA 2 cut(s) 652, 1786
XceI RCATGY 3 cut(s) 402, 1051, 1415
XmiI GTMKAC 1 cut(s) 207
XspI CTAG 5 cut(s) 198, 570, 653, 824, 1787
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.