Prupe.2G135700_v2.0.a1

TMV resistance protein N-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
OG0000036
Physical Location & Seq
Reverse (-)
19328597 .. 19334987
6391 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G135700.1

Sequence Viewer

Length: 3033 bp
ATGGCACTTGTTAGAGCTCAAGAAGCCTCCTCTTCAGATACTTGTGGTTGCAGTTATCATGTGTTCTTGAGTTTCAGAGGTGAAGACACTCGCAAAACTTTTACTGACCACATCTATACAGCCTTTGTCAACGCAGGGCTTCAAACTTTCCGAGACGACGATGAACTTGAGAGAGGGGAAGATATCAAGCCAGAGCTGGAGAAAGCAATCCAACACTCTCGAAGTTCTGTCATTGTGTTTTCGAAAGACTATGCGTCTTCCAAATGGTGCCTTGACGAGCTTGTGATGATCCTGCAACGCAAGAGGACCTCTGATCATGTAGTTTTACCAGTCTTCTACGACATCGATCCATCAGAGGTGAGGAAGCAGACTGGAAGCTTTGCAAAAGCATTTGCTGGACACCAAAAAAATCGATCTCTGAACAAGGACAAGGTGAAAGGATGGAGGGCAGCACTTGCAGAAGTTGCAGATCTTGCAGGCATGGTCTTACAAAATGAATGTGATGGGCACGAGGCAAAGTTTATCAAGAAAATTGTTAAAGTGATTGAAGGCAAGCTAAGTCGCACACCATTGAGTGTTGCCCCTTACCTAATTGGAATGGATTCTCGAGTCAAAGAGATTAATTTATGGTTACAAGATGGATCATCTGATGTTGGGATATTTTTGATTTATGGGATTGGTGGAATAGGGAAGACAACCATTGCACAAGTTGTTTATAATTCAAAATTTTCAAGATTTGAAGGAAGAAGTTTCCTTGAAAATATCAGGGAGATTTCAGAAGGTCCCGATGGTCTGGTTCAAATGCAAGTACAACTTCTCTCTGATATTTTGGGTGGAAGAACAGTGAAGATACATAGTGTTAGTGAGGGAATAATTAAGATTAAGGATGTTATAAGCTGTAAAAAAGTTCTTCTTGTCCTTGATGATGTGGATCATACGAACCAATTAGATGTTGTACTTCGAATGCGAAAATGGTTTTATCCAGGAAGTAAAATTATTATAACAACTAGGTGTGTGGGGTTGTTGAAGGCTCATCAAGATGTTAAGGTGCATAATGTTGAAACCTTAAATCATGTTGAATCATTGGAGCTCTTTAGTTGCCACGCTTTCGGACAGAACTATCCAGTTGAAGGTTATGTGAAACTTTCAGAAAAGGTAGTAAACCACAGCGGAGGACTTCCATTAGCTCTTAAAATTTTGGGTTCTTCACTATCAGGGCAGAGTACAGATGTATGGGAAAGTGCATTAAAGAAATTGGAAGTTATTCCAAACGGTGACATTGTGAATAAGCTCAGAATAAGCTACGACTCTTTACAAGACGACCATGACCAACAATTATTCCTCCATATTGCATGTTTCTTCATTGGAAATGAGAAAGATGTCACAGTGAATATACTAGATGGATGTGATTTCTTTACAATTGTTGGCATTCAAAATCTCCTCGATAGGTGTTTGTTAACAATTGATGAATATAATAAGGTGAAGATGCATCAAATGATTCGTGACATGGGAAGAGAAATTGTTCGCCAAGAATCAAAAGAGCTGGAGAAACGTAGTAGATTATGGCATCATAAGGATTCTCTCAATGTATTGAGAGAAAAGAATGGTTCAAAGAAAGTTGAAGGTCTTGCCCTTAATCTGCACCCTGTAGAGACTCCTTTGAGAAAATCAAATATGGTAGTCTTCGAAACTAATGCATTTAGAAGGATGGTTAAACTAAAACTACTCCAGCTTAGTTTTGTACAGCTCAAGGGATGTTATGAAGAATTTCCTAAAGGACTGAGATGGTTGTATTGGCTTAAATTCCCTTTAGACTCTATACCCAGTGACTTTCTTTTGGAGAGCTTGGTTGTTCTTGAAATGCCCTATAGTAGCTTAAGGCAAATCTGGAAGGGAACAAAGCATCTTCCATCATTAAAGATCCTTGATCTCAGCAATTCCCATGAGCTCACTGAAACCGGCGACTTCTCATTGGTCCCCAATCTGGATAGATTGATTCTTGAAGATTGTGCAAGCTTGGTTGACGTCCATGAATCCATTGGAAACCTAGAGAAACTTGTTTACTTGAATATGAAAGATTGCAAAAATATTAGGAAGCTTCCAAATAGCAGTTCTATGCTAAAATCACTTGAAACACTTATTATATCTGGTTGCTCAAGCCTTAATGAGTTTCCTGTGGAGATGGGGAAGATGGAATCTCTGAAAGTGTTTCAAGCAGATGAAGTTCCAATAAGTCGATTACAAGCTACCACTTTACCCTGCAGTTTAGTTGTTTTAAGTCTTACAAGCTGCAATCTTTCGGATGATGCCTTTCCAAGAGAATTTGGCAACTTGCCCTCATTGCAGAGATTGGATCTAAGTAGCAATCCGATTTGTAGCCTACCAGATTGCATCAGAGGGCTTACGGGGCTCGATCACCTTGCATTTTCCCAATGTACAAAGCTCAAATTGCTTGAGGGGTTACCAAGAGTAAAAGAATTGGTTATACTCCATTCTGAGTCATTGGAGAAAATAACATTTCAATCATGTTCGTGCCTACCAAAGAGTATCATGTATGGTTACAACTCCAAACTTGCTGAGATTGACTACTGGTACAAGTTAGAGCCAATAGAAACAGTGGATGCAGAAATGATCAAACTTTTGGGCTTGTGTAACTTGGAATCCATGAAGGCCATTAGGATGTGCACCCCAGATATGCTTAATTCGGATGGCACAATGCATCCCATCGAGGGACTGTATGAAGTTGGTATATTCAGCACATTTCTTCCTGGAATCGAGGTTCCAGGCCAGTTCAGCTATAGAAGTAAAGGGTCCTCAGTATCTTTTACTGTGCCTTCACTTCCAAATCTCAAGATCCGAGGCTTGAACGTCTTCTCTATTTATGCAAATTCCAACACTTATTATTTTTCTAGTATACCTAATCCAATAATTACCAATGTCAGTAACAAAAGCAAGGGTCTGAAATGGATCTATGCCCCAGCATGCTATGGCATTCCAGATAACGAAAACGACGTGATATGGTTAAGTCACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_8 NB-ARC TIR

Protein Analysis

1011

Amino Acids

113.75

Weight (kDa)

6.54

Isoelectric Point (pI)

41.64

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000036)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G57630 AT1G72930 AT5G38344
fragaria_vesca FvH4_1g27020 FvH4_2g00931 FvH4_2g17330 FvH4_2g17330 FvH4_2g17340 FvH4_2g17350 FvH4_2g20690 FvH4_5g15301 FvH4_5g34194 FvH4_5g38530 FvH4_5g38740 FvH4_5g38740 FvH4_5g38740 FvH4_6g03800 FvH4_7g09791 FvH4_7g09800 FvH4_7g09800 FvH4_7g10510 FvH4_7g10520 FvH4_7g10520 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750
malus_domestica MD02G1217100.v1.1 MD02G1217200.v1.1 MD02G1217400.v1.1 MD02G1217600.v1.1 MD02G1264800.v1.1 MD02G1264900.v1.1 MD02G1302100.v1.1 MD04G1010700.v1.1 MD05G1006800.v1.1 MD05G1140100.v1.1 MD05G1140200.v1.1 MD05G1152200.v1.1 MD07G1073500.v1.1 MD07G1101700.v1.1 MD07G1102200.v1.1 MD07G1103200.v1.1 MD07G1112300.v1.1 MD08G1018200.v1.1 MD08G1018400.v1.1 MD08G1018800.v1.1 MD08G1019000.v1.1 MD08G1019100.v1.1 MD08G1019200.v1.1 MD08G1019300.v1.1 MD08G1019400.v1.1 MD08G1019600.v1.1 MD08G1019900.v1.1 MD08G1020000.v1.1 MD08G1020200.v1.1 MD08G1020500.v1.1 MD08G1020700.v1.1 MD08G1020800.v1.1 MD08G1040700.v1.1 MD11G1112400.v1.1 MD12G1068600.v1.1 MD12G1193200.v1.1 MD13G1050600.v1.1 MD15G1374900.v1.1 MD15G1375100.v1.1 MD15G1416500.v1.1 MD17G1072500.v1.1 MD17G1274200.v1.1 MD17G1274900.v1.1
prunus_persica Prupe.2G121000_v2.0.a1 Prupe.2G121000_v2.0.a1 Prupe.2G125800_v2.0.a1 Prupe.2G126000_v2.0.a1 Prupe.2G126100_v2.0.a1 Prupe.2G126200_v2.0.a1 Prupe.2G126300_v2.0.a1 Prupe.2G126400_v2.0.a1 Prupe.2G126500_v2.0.a1 Prupe.2G126600_v2.0.a1 Prupe.2G126700_v2.0.a1 Prupe.2G126700_v2.0.a1 Prupe.2G126800_v2.0.a1 Prupe.2G126900_v2.0.a1 Prupe.2G127000_v2.0.a1 Prupe.2G127000_v2.0.a1 Prupe.2G127000_v2.0.a1 Prupe.2G127000_v2.0.a1 Prupe.2G135500_v2.0.a1 Prupe.2G135600_v2.0.a1 Prupe.2G135700_v2.0.a1 Prupe.2G135700_v2.0.a1 Prupe.3G009800_v2.0.a1 Prupe.3G010200_v2.0.a1 Prupe.3G131000_v2.0.a1 Prupe.4G260800_v2.0.a1 Prupe.4G260900_v2.0.a1 Prupe.6G083100_v2.0.a1 Prupe.6G083200_v2.0.a1 Prupe.6G083400_v2.0.a1 Prupe.6G132100_v2.0.a1 Prupe.8G184900_v2.0.a1 Prupe.8G185200_v2.0.a1 Prupe.8G185300_v2.0.a1
pyrus_communis pycom02g17870 pycom02g17880 pycom02g19520 pycom02g22610 pycom02g22630 pycom02g22680 pycom05g13540 pycom05g14680 pycom07g04880 pycom07g04890 pycom07g05690 pycom07g05710 pycom07g05720 pycom07g05750 pycom07g05780 pycom07g06300 pycom07g08320 pycom07g08330 pycom07g08350 pycom07g08360 pycom07g08370 pycom07g08410 pycom07g08420 pycom07g08430 pycom07g08440 pycom07g08470 pycom07g08480 pycom07g08520 pycom07g08550 pycom07g08560 pycom07g08640 pycom07g08660 pycom07g08670 pycom07g08680 pycom07g08690 pycom07g08720 pycom07g08730 pycom07g08790 pycom07g08800 pycom07g08810 pycom07g08860 pycom07g08890 pycom07g09720 pycom08g01590 pycom08g01600 pycom08g01620 pycom08g01630 pycom08g01640 pycom10g12630 pycom15g16490 pycom17g07200 pycom17g07210 pycom17g07220 pycom17g11730 pycom17g11740 pycom17g27340 pycom17g27380
rosa_chinensis RchiOBHm_Chr1g0342571 RchiOBHm_Chr1g0346231 RchiOBHm_Chr1g0346831 RchiOBHm_Chr1g0346891 RchiOBHm_Chr1g0348311 RchiOBHm_Chr1g0348321 RchiOBHm_Chr1g0348331 RchiOBHm_Chr1g0348361 RchiOBHm_Chr1g0348371 RchiOBHm_Chr1g0348381 RchiOBHm_Chr1g0348401 RchiOBHm_Chr1g0348411 RchiOBHm_Chr1g0348421 RchiOBHm_Chr1g0348431 RchiOBHm_Chr2g0130881 RchiOBHm_Chr3g0487331 RchiOBHm_Chr5g0060371 RchiOBHm_Chr6g0246491 RchiOBHm_Chr6g0246871 RchiOBHm_Chr6g0250311 RchiOBHm_Chr6g0250781 RchiOBHm_Chr6g0251431 RchiOBHm_Chr6g0281871 RchiOBHm_Chr6g0281881 RchiOBHm_Chr6g0281931 RchiOBHm_Chr6g0281941 RchiOBHm_Chr6g0281951 RchiOBHm_Chr6g0281971 RchiOBHm_Chr6g0281981 RchiOBHm_Chr7g0240541 RchiOBHm_Chr7g0240631 RchiOBHm_Chr7g0240671
rosa_laevigata RLG00000000627 RLG00000000631 RLG00000000641 RLG00000000645 RLG00000000652 RLG00000000662 RLG00000000663 RLG00000000667 RLG00000000670 RLG00000000702 RLG00000001216 RLG00000001219 RLG00000007678 RLG00000012923 RLG00000012996 RLG00000013243 RLG00000017513 RLG00000017514 RLG00000020936 RLG00000022755 RLG00000023013 RLG00000028646 RLG00000028654 RLG00000028662 RLG00000028665 RLG00000028667 RLG00000028711 RLG00000028714 RLG00000028716 RLG00000028770 RLG00000028771 RLG00000028773 RLG00000028778 RLG00000028798 RLG00000028809 RLG00000028813 RLG00000029334 RLG00000030003 RLG00000033910 RLG00000034358 RLG00000035430
rosa_multiflora Rmu_co8031134.1_g000001 Rmu_co8092796.1_g000001 Rmu_co8130156.1_g000001 Rmu_co8325323.1_g000001 Rmu_co8424083.1_g000002 Rmu_sc0000008.1_g000003 Rmu_sc0000008.1_g000011 Rmu_sc0000008.1_g000015 Rmu_sc0000008.1_g000020 Rmu_sc0000091.1_g000015 Rmu_sc0000091.1_g000018 Rmu_sc0000091.1_g000029 Rmu_sc0000091.1_g000031 Rmu_sc0000391.1_g000004 Rmu_sc0001070.1_g000030 Rmu_sc0001293.1_g000016 Rmu_sc0001674.1_g000006 Rmu_sc0001731.1_g000002 Rmu_sc0001731.1_g000003 Rmu_sc0001731.1_g000005 Rmu_sc0001911.1_g000029 Rmu_sc0001913.1_g000038 Rmu_sc0001955.1_g000025 Rmu_sc0001992.1_g000022 Rmu_sc0001992.1_g000028 Rmu_sc0001992.1_g000031 Rmu_sc0002517.1_g000013 Rmu_sc0002517.1_g000017 Rmu_sc0002551.1_g000022 Rmu_sc0002551.1_g000029 Rmu_sc0002551.1_g000038 Rmu_sc0002705.1_g000015 Rmu_sc0002705.1_g000016 Rmu_sc0002882.1_g000055 Rmu_sc0003232.1_g000027 Rmu_sc0003363.1_g000037 Rmu_sc0003600.1_g000054 Rmu_sc0003918.1_g000011 Rmu_sc0004395.1_g000011 Rmu_sc0005071.1_g000004 Rmu_sc0005255.1_g000018 Rmu_sc0005327.1_g000004 Rmu_sc0005597.1_g000007 Rmu_sc0007060.1_g000007 Rmu_sc0007310.1_g000003 Rmu_sc0007383.1_g000014 Rmu_sc0007799.1_g000003 Rmu_sc0008477.1_g000016 Rmu_sc0010151.1_g000009 Rmu_sc0011217.1_g000005 Rmu_sc0016269.1_g000006 Rmu_sc0021495.1_g000001 Rmu_sc0027364.1_g000001 Rmu_sc0029432.1_g000001 Rmu_sc0041386.1_g000001 Rmu_ssc0000126.1_g000023 Rmu_ssc0000126.1_g000027
rosa_roxburghii Rroxscaffold_1G00006130 Rroxscaffold_1G00023320 Rroxscaffold_1G00038770 Rroxscaffold_2G00119800 Rroxscaffold_2G00121860 Rroxscaffold_3G00219780 Rroxscaffold_3G00219890 Rroxscaffold_4G00306740 Rroxscaffold_4G00306820 Rroxscaffold_4G00307000 Rroxscaffold_4G00307010 Rroxscaffold_4G00307020 Rroxscaffold_4G00308030 Rroxscaffold_4G00308070 Rroxscaffold_4G00308450 Rroxscaffold_4G00308460 Rroxscaffold_4G00315320 Rroxscaffold_5G00352470 Rroxscaffold_5G00371420 Rroxscaffold_6G00392300 Rroxscaffold_6G00394870 Rroxscaffold_6G00394890 Rroxscaffold_7G00186700 Rroxscaffold_7G00194980 Rroxscaffold_7G00216840
rosa_rugosa Rorug01G0076100 Rorug01G0128100 Rorug01G0149000.1 Rorug01G0149500.1 Rorug01G0180000 Rorug01G0180100 Rorug01G0182900 Rorug01G0184000 Rorug01G0184100 Rorug01G0184300 Rorug01G0184600 Rorug01G0184700 Rorug01G0184700 Rorug01G0184900 Rorug01G0185000 Rorug01G0185100 Rorug01G0189300 Rorug01G0194100 Rorug01G0194100 Rorug01G0194200 Rorug01G0194400 Rorug01G0194400 Rorug01G0194500 Rorug02G0090400 Rorug02G0090400 Rorug03G0233000 Rorug03G0233100 Rorug05G0178600 Rorug05G0178700 Rorug05G0579200 Rorug06G0144100 Rorug06G0144300 Rorug06G0144300 Rorug06G0179300 Rorug06G0208800 Rorug07G0323500 Rorug07G0337000
rosa_samantha Rh1AG046100 Rh1AG201400 Rh1AG201800 Rh1AG202100 Rh1AG202600 Rh1AG211500 Rh1AG211800 Rh1AG212200 Rh1AG212500 Rh1AG212600 Rh1AG214200 Rh1BG168000 Rh1BG168300 Rh1BG168500 Rh1BG177900 Rh1BG178200 Rh1BG178300 Rh1BG178800 Rh1BG178900 Rh1CG080900 Rh1CG183300 Rh1CG186300 Rh1CG186700 Rh1CG187000 Rh1CG187300 Rh1CG193400 Rh1CG195800 Rh1CG196000 Rh1CG196100 Rh1CG196400 Rh1CG196500 Rh1CG196800 Rh1CG198800 Rh1CG442600 Rh1DG086200 Rh1DG155400 Rh1DG156200 Rh1DG194000 Rh1DG194300 Rh1DG194900 Rh1DG197000 Rh1DG198800 Rh1DG199000 Rh1DG199200 Rh1DG202000 Rh1DG203900 Rh1DG207600 Rh1DG207900 Rh1DG208000 Rh1DG208500 Rh1DG208600 Rh1DG208700 Rh3CG339100 Rh5AG106500 Rh5AG264800 Rh5AG265300 Rh5CG302800 Rh5DG277900 Rh6AG257600 Rh6AG257700 Rh6BG260500 Rh6BG260700 Rh6CG259600 Rh6CG259700 Rh6DG252100 Rh7DG126900
rosa_wichuraiana Rw0G005780 Rw0G007540 Rw0G007550 Rw0G007560 Rw0G009390 Rw1G016900 Rw1G016930 Rw1G016940 Rw1G016970 Rw1G017860 Rw1G017890 Rw1G017900 Rw1G017910 Rw1G017920 Rw1G017960 Rw1G017970 Rw1G017980 Rw1G018150 Rw4G000830 Rw5G009290 Rw5G018950 Rw5G024850 Rw5G024870 Rw5G040460 Rw6G022290 Rw7G041020 Rw7G041200 Rw7G041360 Rw7G041450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 717, 893, 1001
AatII GACGTC 1 cut(s) 2028
AccB1I GGYRCC 1 cut(s) 267
AccI GTMKAC 1 cut(s) 2914
AciI CCGC 1 cut(s) 1170
AclWI GGATC 8 cut(s) 283, 341, 649, 939, 1915, 2361, 2848, 2975
AcsI RAATTY 6 cut(s) 725, 1194, 1766, 1802, 2321, 2887
AcuI CTGAAG 1 cut(s) 18
AcyI GRCGYC 1 cut(s) 2025
AfaI GTAC 6 cut(s) 810, 957, 1225, 1743, 2437, 2594
AfiI CCNNNNNNNGG 3 cut(s) 1130, 1984, 2729
AflII CTTAAG 1 cut(s) 1876
AhdI GACNNNNNGTC 1 cut(s) 253
AjiI CACGTC 1 cut(s) 3013
AjnI CCWGG 3 cut(s) 982, 2767, 2782
AjuI GAANNNNNNNTTGG 2 cut(s) 2095, 2127
AloI GAACNNNNNNTCC 2 cut(s) 2763, 2795
Alw21I GWGCWC 4 cut(s) 19, 1092, 1950, 2687
Alw26I GTCTC 2 cut(s) 147, 1646
Alw44I GTGCAC 1 cut(s) 2683
AlwI GGATC 8 cut(s) 283, 341, 649, 939, 1915, 2361, 2848, 2975
Ama87I CYCGRG 1 cut(s) 606
AoxI GGCC 2 cut(s) 2670, 2785
ApaLI GTGCAC 1 cut(s) 2683
ApeKI GCWGC 2 cut(s) 449, 2289
ApoI RAATTY 6 cut(s) 725, 1194, 1766, 1802, 2321, 2887
AseI ATTAAT 1 cut(s) 621
Asp700I GAANNNNTTC 5 cut(s) 601, 1263, 1521, 1767, 2870
AspS9I GGNCC 4 cut(s) 306, 782, 1975, 2811
AsuHPI GGTGA 6 cut(s) 92, 370, 445, 1286, 1492, 2408
AsuII TTCGAA 3 cut(s) 242, 961, 1686
AvaI CYCGRG 1 cut(s) 606
AvaII GGWCC 4 cut(s) 306, 782, 1975, 2811
BaeGI GKGCMC 2 cut(s) 510, 2687
BanI GGYRCC 1 cut(s) 267
BanII GRGCYC 4 cut(s) 19, 1092, 1950, 2412
BauI CACGAG 1 cut(s) 509
BbsI GAAGAC 6 cut(s) 90, 249, 325, 698, 1675, 2863
Bbv12I GWGCWC 4 cut(s) 19, 1092, 1950, 2687
BbvI GCAGC 2 cut(s) 461, 2276
BcgI CGANNNNNNTGC 4 cut(s) 1676, 1710, 2402, 2436
BciT130I CCWGG 3 cut(s) 984, 2769, 2784
BclI TGATCA 2 cut(s) 313, 2631
BcoDI GTCTC 2 cut(s) 147, 1646
BfaI CTAG 5 cut(s) 1008, 1397, 2048, 2910, 3031
BfmI CTRYAG 4 cut(s) 1647, 1867, 2260, 2797
BfrI CTTAAG 1 cut(s) 1876
BglII AGATCT 1 cut(s) 469
BisI GCNGC 2 cut(s) 450, 2290
BlsI GCNGC 2 cut(s) 451, 2291
Bme1390I CCNGG 3 cut(s) 984, 2769, 2784
Bme18I GGWCC 4 cut(s) 306, 782, 1975, 2811
BmeRI GACNNNNNGTC 1 cut(s) 253
BmeT110I CYCGRG 1 cut(s) 606
BmgBI CACGTC 1 cut(s) 3013
BmgT120I GGNCC 4 cut(s) 306, 782, 1975, 2811
BmiI GGNNCC 5 cut(s) 269, 784, 1977, 2781, 2812
BmrFI CCNGG 3 cut(s) 984, 2769, 2784
BmrI ACTGGG 1 cut(s) 1818
BmsI GCATC 8 cut(s) 1476, 1498, 1576, 1912, 2296, 2400, 2611, 2728
BmuI ACTGGG 1 cut(s) 1818
BpiI GAAGAC 6 cut(s) 90, 249, 325, 698, 1675, 2863
BpmI CTGGAG 3 cut(s) 218, 1565, 1712
Bpu14I TTCGAA 3 cut(s) 242, 961, 1686
BpuEI CTTGAG 6 cut(s) 88, 188, 1733, 2140, 2474, 2834
Bsa29I ATCGAT 2 cut(s) 345, 412
BsaBI GATNNNNATC 1 cut(s) 930
BsaHI GRCGYC 1 cut(s) 2025
BsaJI CCNNGG 1 cut(s) 2857
Bsc4I CCNNNNNNNGG 3 cut(s) 1130, 1984, 2729
Bse118I RCCGGY 1 cut(s) 1958
Bse1I ACTGG 6 cut(s) 329, 376, 1124, 1824, 2594, 2788
Bse3DI GCAATG 2 cut(s) 699, 2339
Bse8I GATNNNNATC 1 cut(s) 930
BseBI CCWGG 3 cut(s) 984, 2769, 2784
BseCI ATCGAT 2 cut(s) 345, 412
BseDI CCNNGG 1 cut(s) 2857
BseJI GATNNNNATC 1 cut(s) 930
BseLI CCNNNNNNNGG 3 cut(s) 1130, 1984, 2729
BseMI GCAATG 2 cut(s) 699, 2339
BseMII CTCAG 6 cut(s) 1306, 1772, 1945, 2487, 2568, 2829
BseNI ACTGG 6 cut(s) 329, 376, 1124, 1824, 2594, 2788
BseRI GAGGAG 2 cut(s) 19, 1430
BseSI GKGCMC 2 cut(s) 510, 2687
BseXI GCAGC 2 cut(s) 461, 2276
BseYI CCCAGC 1 cut(s) 2977
BsgI GTGCAG 1 cut(s) 1625
BshFI GGCC 2 cut(s) 2672, 2787
BshNI GGYRCC 1 cut(s) 267
BshVI ATCGAT 2 cut(s) 345, 412
BsiHKAI GWGCWC 4 cut(s) 19, 1092, 1950, 2687
BsiHKCI CYCGRG 1 cut(s) 606
BsiSI CCGG 1 cut(s) 1959
BslFI GGGAC 3 cut(s) 768, 1961, 2745
BslI CCNNNNNNNGG 3 cut(s) 1130, 1984, 2729
BsmAI GTCTC 2 cut(s) 147, 1646
BsmBI CGTCTC 1 cut(s) 147
BsmFI GGGAC 3 cut(s) 768, 1961, 2745
BsmI GAATGC 3 cut(s) 969, 1428, 2991
BsnI GGCC 2 cut(s) 2672, 2787
BsoBI CYCGRG 1 cut(s) 606
Bsp119I TTCGAA 3 cut(s) 242, 961, 1686
Bsp1286I GDGCHC 6 cut(s) 19, 510, 1092, 1950, 2412, 2687
Bsp1407I TGTACA 2 cut(s) 1741, 2435
BspACI CCGC 1 cut(s) 1170
BspANI GGCC 2 cut(s) 2672, 2787
BspCNI CTCAG 6 cut(s) 1305, 1773, 1944, 2488, 2569, 2828
BspDI ATCGAT 2 cut(s) 345, 412
BspLI GGNNCC 5 cut(s) 269, 784, 1977, 2781, 2812
BspMAI CTGCAG 1 cut(s) 2264
BspPI GGATC 8 cut(s) 283, 341, 649, 939, 1915, 2361, 2848, 2975
BspT104I TTCGAA 3 cut(s) 242, 961, 1686
BspT107I GGYRCC 1 cut(s) 267
BspTI CTTAAG 1 cut(s) 1876
BsrDI GCAATG 2 cut(s) 699, 2339
BsrFI RCCGGY 1 cut(s) 1958
BsrGI TGTACA 2 cut(s) 1741, 2435
BsrI ACTGG 6 cut(s) 329, 376, 1124, 1824, 2594, 2788
BssAI RCCGGY 1 cut(s) 1958
BssECI CCNNGG 1 cut(s) 2857
BssNAI GTATAC 1 cut(s) 2915
BssNI GRCGYC 1 cut(s) 2025
BssSI CACGAG 1 cut(s) 509
Bst1107I GTATAC 1 cut(s) 2915
Bst2BI CACGAG 1 cut(s) 509
Bst2UI CCWGG 3 cut(s) 984, 2769, 2784
Bst4CI ACNGT 6 cut(s) 844, 1274, 1387, 2617, 2736, 2830
Bst6I CTCTTC 2 cut(s) 37, 1507
BstACI GRCGYC 1 cut(s) 2025
BstAFI CTTAAG 1 cut(s) 1876
BstAPI GCANNNNNTGC 3 cut(s) 455, 464, 473
BstAUI TGTACA 2 cut(s) 1741, 2435
BstBI TTCGAA 3 cut(s) 242, 961, 1686
BstC8I GCNNGC 4 cut(s) 478, 554, 2014, 2983
BstDEI CTNAG 9 cut(s) 557, 1292, 1733, 1781, 1931, 2357, 2496, 2577, 2815
BstEII GGTNACC 1 cut(s) 2460
BstMAI GTCTC 2 cut(s) 147, 1646
BstMWI GCNNNNNNNGC 8 cut(s) 23, 455, 464, 473, 2341, 2407, 2449, 2793
BstNI CCWGG 3 cut(s) 984, 2769, 2784
BstNSI RCATGY 2 cut(s) 1356, 2985
BstPI GGTNACC 1 cut(s) 2460
BstSCI CCNGG 3 cut(s) 982, 2767, 2782
BstSFI CTRYAG 4 cut(s) 1647, 1867, 2260, 2797
BstSLI GKGCMC 2 cut(s) 510, 2687
BstV1I GCAGC 2 cut(s) 461, 2276
BstV2I GAAGAC 6 cut(s) 90, 249, 325, 698, 1675, 2863
BstX2I RGATCY 5 cut(s) 469, 1920, 2353, 2853, 2967
BstYI RGATCY 5 cut(s) 469, 1920, 2353, 2853, 2967
BstZ17I GTATAC 1 cut(s) 2915
Bsu15I ATCGAT 2 cut(s) 345, 412
BsuRI GGCC 2 cut(s) 2672, 2787
BsuTUI ATCGAT 2 cut(s) 345, 412
BtrI CACGTC 1 cut(s) 3013
BtsIMutI CAGTG 5 cut(s) 849, 1392, 1831, 1950, 2622
Cac8I GCNNGC 4 cut(s) 478, 554, 2014, 2983
Cfr10I RCCGGY 1 cut(s) 1958
Cfr13I GGNCC 4 cut(s) 306, 782, 1975, 2811
ClaI ATCGAT 2 cut(s) 345, 412
CseI GACGC 1 cut(s) 243
Csp6I GTAC 6 cut(s) 809, 956, 1224, 1742, 2436, 2593
CviQI GTAC 6 cut(s) 809, 956, 1224, 1742, 2436, 2593
DdeI CTNAG 9 cut(s) 557, 1292, 1733, 1781, 1931, 2357, 2496, 2577, 2815
DriI GACNNNNNGTC 1 cut(s) 253
Eam1104I CTCTTC 2 cut(s) 37, 1507
Eam1105I GACNNNNNGTC 1 cut(s) 253
EarI CTCTTC 2 cut(s) 37, 1507
Ecl136II GAGCTC 3 cut(s) 17, 1090, 1948
Eco24I GRGCYC 4 cut(s) 19, 1092, 1950, 2412
Eco32I GATATC 1 cut(s) 184
Eco47I GGWCC 4 cut(s) 306, 782, 1975, 2811
Eco53kI GAGCTC 3 cut(s) 17, 1090, 1948
Eco57I CTGAAG 1 cut(s) 18
Eco88I CYCGRG 1 cut(s) 606
Eco91I GGTNACC 1 cut(s) 2460
EcoICRI GAGCTC 3 cut(s) 17, 1090, 1948
EcoO109I RGGNCCY 3 cut(s) 306, 782, 2811
EcoO65I GGTNACC 1 cut(s) 2460
EcoRII CCWGG 3 cut(s) 982, 2767, 2782
EcoRV GATATC 1 cut(s) 184
EcoT22I ATGCAT 3 cut(s) 1491, 1699, 2721
EcoT38I GRGCYC 4 cut(s) 19, 1092, 1950, 2412
Esp3I CGTCTC 1 cut(s) 147
FalI AAGNNNNNCTT 4 cut(s) 798, 830, 897, 929
FaqI GGGAC 3 cut(s) 768, 1961, 2745
FbaI TGATCA 2 cut(s) 313, 2631
FblI GTMKAC 1 cut(s) 2914
Fnu4HI GCNGC 2 cut(s) 450, 2290
FriOI GRGCYC 4 cut(s) 19, 1092, 1950, 2412
Fsp4HI GCNGC 2 cut(s) 450, 2290
FspBI CTAG 5 cut(s) 1008, 1397, 2048, 2910, 3031
GluI GCNGC 2 cut(s) 450, 2290
GsaI CCCAGC 1 cut(s) 2981
GsuI CTGGAG 3 cut(s) 218, 1565, 1712
HaeIII GGCC 2 cut(s) 2672, 2787
HapII CCGG 1 cut(s) 1959
HgaI GACGC 1 cut(s) 243
Hin1I GRCGYC 1 cut(s) 2025
HincII GTYRAC 3 cut(s) 130, 1458, 2023
HindII GTYRAC 3 cut(s) 130, 1458, 2023
HindIII AAGCTT 3 cut(s) 376, 2014, 2096
HpaI GTTAAC 1 cut(s) 1458
HpaII CCGG 1 cut(s) 1959
HphI GGTGA 6 cut(s) 92, 370, 445, 1286, 1492, 2408
Hpy166II GTNNAC 7 cut(s) 130, 1162, 1458, 2023, 2062, 2685, 2915
Hpy8I GTNNAC 7 cut(s) 130, 1162, 1458, 2023, 2062, 2685, 2915
Hpy99I CGWCG 2 cut(s) 161, 3014
HpyCH4III ACNGT 6 cut(s) 844, 1274, 1387, 2617, 2736, 2830
HpyCH4IV ACGT 4 cut(s) 1552, 2025, 2868, 3012
HpyF10VI GCNNNNNNNGC 8 cut(s) 23, 455, 464, 473, 2341, 2407, 2449, 2793
HpyF3I CTNAG 9 cut(s) 557, 1292, 1733, 1781, 1931, 2357, 2496, 2577, 2815
HpySE526I ACGT 4 cut(s) 1552, 2025, 2868, 3012
Hsp92I GRCGYC 1 cut(s) 2025
Ksp22I TGATCA 2 cut(s) 313, 2631
KspAI GTTAAC 1 cut(s) 1458
LmnI GCTCC 1 cut(s) 1087
Lsp1109I GCAGC 2 cut(s) 461, 2276
LweI GCATC 8 cut(s) 1476, 1498, 1576, 1912, 2296, 2400, 2611, 2728
MaeI CTAG 5 cut(s) 1008, 1397, 2048, 2910, 3031
MaeII ACGT 4 cut(s) 1552, 2025, 2868, 3012
MfeI CAATTG 2 cut(s) 1419, 1461
MflI RGATCY 5 cut(s) 469, 1920, 2353, 2853, 2967
MhlI GDGCHC 6 cut(s) 19, 510, 1092, 1950, 2412, 2687
MlyI GAGTC 5 cut(s) 618, 1301, 1648, 1808, 2507
MmeI TCCRAC 2 cut(s) 235, 2916
Mph1103I ATGCAT 3 cut(s) 1491, 1699, 2721
MroXI GAANNNNTTC 5 cut(s) 601, 1263, 1521, 1767, 2870
MslI CAYNNNNRTG 3 cut(s) 1038, 2530, 2678
MspA1I CMGCKG 1 cut(s) 1170
MspCI CTTAAG 1 cut(s) 1876
MspI CCGG 1 cut(s) 1959
MspR9I CCNGG 3 cut(s) 984, 2769, 2784
MunI CAATTG 2 cut(s) 1419, 1461
Mva1269I GAATGC 3 cut(s) 969, 1428, 2991
MvaI CCWGG 3 cut(s) 984, 2769, 2784
MwoI GCNNNNNNNGC 8 cut(s) 23, 455, 464, 473, 2341, 2407, 2449, 2793
NlaIV GGNNCC 5 cut(s) 269, 784, 1977, 2781, 2812
NmuCI GTSAC 5 cut(s) 1274, 1381, 1502, 1826, 3026
NsiI ATGCAT 3 cut(s) 1491, 1699, 2721
NspI RCATGY 2 cut(s) 1356, 2985
NspV TTCGAA 3 cut(s) 242, 961, 1686
PaeI GCATGC 1 cut(s) 2985
PaeR7I CTCGAG 1 cut(s) 606
PcsI WCGNNNNNNNCGW 1 cut(s) 3009
PctI GAATGC 3 cut(s) 969, 1428, 2991
PdmI GAANNNNTTC 5 cut(s) 601, 1263, 1521, 1767, 2870
PfoI TCCNGGA 2 cut(s) 982, 2767
PkrI GCNGC 2 cut(s) 451, 2291
PleI GAGTC 5 cut(s) 617, 1301, 1648, 1808, 2506
PpsI GAGTC 5 cut(s) 617, 1301, 1648, 1808, 2506
PpuMI RGGWCCY 3 cut(s) 306, 782, 2811
PshBI ATTAAT 1 cut(s) 621
PsiI TTATAA 3 cut(s) 717, 893, 1001
Psp124BI GAGCTC 3 cut(s) 19, 1092, 1950
Psp5II RGGWCCY 3 cut(s) 306, 782, 2811
Psp6I CCWGG 3 cut(s) 982, 2767, 2782
PspEI GGTNACC 1 cut(s) 2460
PspFI CCCAGC 1 cut(s) 2977
PspGI CCWGG 3 cut(s) 982, 2767, 2782
PspN4I GGNNCC 5 cut(s) 269, 784, 1977, 2781, 2812
PspPI GGNCC 4 cut(s) 306, 782, 1975, 2811
PspPPI RGGWCCY 3 cut(s) 306, 782, 2811
PstI CTGCAG 1 cut(s) 2264
PsuI RGATCY 5 cut(s) 469, 1920, 2353, 2853, 2967
RsaI GTAC 6 cut(s) 810, 957, 1225, 1743, 2437, 2594
RsaNI GTAC 6 cut(s) 809, 956, 1224, 1742, 2436, 2593
RseI CAYNNNNRTG 3 cut(s) 1038, 2530, 2678
SacI GAGCTC 3 cut(s) 19, 1092, 1950
SatI GCNGC 2 cut(s) 450, 2290
Sau96I GGNCC 4 cut(s) 306, 782, 1975, 2811
SchI GAGTC 5 cut(s) 618, 1301, 1648, 1808, 2507
ScrFI CCNGG 3 cut(s) 984, 2769, 2784
SduI GDGCHC 6 cut(s) 19, 510, 1092, 1950, 2412, 2687
SfaNI GCATC 8 cut(s) 1476, 1498, 1576, 1912, 2296, 2400, 2611, 2728
SfcI CTRYAG 4 cut(s) 1647, 1867, 2260, 2797
Sfr274I CTCGAG 1 cut(s) 606
SfuI TTCGAA 3 cut(s) 242, 961, 1686
SinI GGWCC 4 cut(s) 306, 782, 1975, 2811
SlaI CTCGAG 1 cut(s) 606
SmiMI CAYNNNNRTG 3 cut(s) 1038, 2530, 2678
SmlI CTYRAG 9 cut(s) 18, 67, 167, 606, 1748, 1876, 2155, 2453, 2849
SmoI CTYRAG 9 cut(s) 18, 67, 167, 606, 1748, 1876, 2155, 2453, 2849
SphI GCATGC 1 cut(s) 2985
SsiI CCGC 1 cut(s) 1170
SspI AATATT 1 cut(s) 2089
SspMI CTAG 5 cut(s) 1008, 1397, 2048, 2910, 3031
SstI GAGCTC 3 cut(s) 19, 1092, 1950
StyD4I CCNGG 3 cut(s) 982, 2767, 2782
TaaI ACNGT 6 cut(s) 844, 1274, 1387, 2617, 2736, 2830
TaiI ACGT 4 cut(s) 1555, 2028, 2871, 3015
TatI WGTACW 5 cut(s) 808, 955, 1223, 1741, 2435
TscAI CASTG 5 cut(s) 849, 1392, 1831, 1957, 2622
TseFI GTSAC 5 cut(s) 1274, 1381, 1502, 1826, 3026
TseI GCWGC 2 cut(s) 449, 2289
Tsp45I GTSAC 5 cut(s) 1274, 1381, 1502, 1826, 3026
TspRI CASTG 5 cut(s) 849, 1392, 1831, 1957, 2622
Vha464I CTTAAG 1 cut(s) 1876
VneI GTGCAC 1 cut(s) 2683
VpaK11BI GGWCC 4 cut(s) 306, 782, 1975, 2811
VspI ATTAAT 1 cut(s) 621
XapI RAATTY 6 cut(s) 725, 1194, 1766, 1802, 2321, 2887
XceI RCATGY 2 cut(s) 1356, 2985
XcmI CCANNNNNNNNNTGG 1 cut(s) 2036
XhoI CTCGAG 1 cut(s) 606
XmiI GTMKAC 1 cut(s) 2914
XmnI GAANNNNTTC 5 cut(s) 601, 1263, 1521, 1767, 2870
XspI CTAG 5 cut(s) 1008, 1397, 2048, 2910, 3031
ZraI GACGTC 1 cut(s) 2026
Zsp2I ATGCAT 3 cut(s) 1491, 1699, 2721
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.