Rmu_sc0000091.1_g000018

TMV resistance protein N-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000091.1
OG0000036
Physical Location & Seq
Reverse (-)
69095 .. 74085
4991 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000091.1_g000018.1.cds

Sequence Viewer

Length: 3654 bp
atggctcttgttggagctgatcatgaagccgcctcttccaacacatctcattctcgatgcaatcatcacgttttcttgagtttcagaggtgaagaaactcgctacacttttaccgatcacctatattcggccttggtcaacgcaggatttcgcacttttcgagatgaggatgaactcgagagaggagaaggtatccggccagaactacagaaagcaatccaacagtctcgaagttctgtcgttgtgatttctaaagactacgcatcttcaggatggtgcctggacgagcttgtcatgatacttgaacgcaagagaacctccgatcatgtagttttaccaatattctacgatattgatccatcccatgtgaggaaacagagtggaagtgttgcaatagcgtttgctagacatgagaaaaaacaatctctggagaagttgaataggtggagggcagcacttaccgaagtttcagatctagcaggcatggtgctacaaaaccaagctgataggcatgagtcgaagtttataaagaaaattgttaaagtgattgaaggcaaactttgtcgcatccccttaagtgttagcccttacctggtcggaatgcagtatcaggttgaaaacatcgtttcatggttacaagatggatcatctgatgttagcatatatggaatttctgggattggtggtattggaaagacaaccattgcgcaagtggtttataactcatttttcagaagttttgaaggaagcagtttccttgaaaacatcagagaagtttcagaacaacccaatggcttagttcgactacagaagcaacttcttgctgatattttgaagggaaggaaagtgaaagtacagagtgttagtgagggaataattaagattagagatttcataagcaccaaaaaagtacttcttgtcctcgatgatgttgatcatctaggtcagttagatgcagtagttggtatgagagattgcttttgtccaggaagtaaaattattataactactaggcattctgggttgttaaaggctagtcaagttgttaacgtgcatagcgttagaactttaaatgatgctcaatcactggagctttttagttggcattcttttggacaggaccatccagttgcaggttacgtcgaactttcagaaggggtagttaaccactgtggaggactaccgttagctcttcaaactttgggttcttctttatcggggaaaacgttagatgtatgggaaagtgcattaaagaaactgaatgctattccaaacagtgaagtcttgagcaagcttagaataagctacgactctttacaagatgaccatgatcaaaatttgtttctccatcttgcttgtttctttattggaaaggacaaggatgttgtggtcaaaatattagatgaatgtaatttttacacaattgttggtattcaaaatcttgttgatagatgtttggtaacaatcaatgtaaataatgtggtgagcatgcatcaaatgattcgtgacatgggaagagaaattgttcgacaagaatcaagggagccggagaaacgcagtcgattatgggatcccaaagattccttgaatgtactgatgagagaaaagaaaggttcagacacaattgaaggtcttgccctgaacatgtaccggtaccctgtcgtcttggaaaccaaagcatttgcagggatgcacaaactgagattactccaacttggttatgtacaactgactggaagttgtgaagaacttcccaaggggttgaaatggttgtgctggcttcagtttccgttggattctatactcatcagttttcctttggaaagcctggtcgttctagaaatgtcttgcagtagcttgagaaaactctggcagggaacaaagcatcttccatctttgaagatccttgatctccgccattcccatgacctgataaaaagcggtgacttctcattggtccccaatctagagagactgatatttgaagattgttcaagcttggttgatgtccatgaatctgttggaaacttagagaagctcgtatacttgaacatgagggattgcaaaagtattgtcaaacttccaaagaacatttgtatgctgaaattactagagacacttattatatccggttgctcaaatctttatgagtttccaatggaggttgggaagatgaaacatctgaaagttcttgaagcagatggaatttcaataaatcaattagtcacaacttctggggaagccgaatcatggccaagaaaaagtgttgataacttttgggcttgtttgtcctgcactttagttcatctaagtcttccacattgtaatctttctgatgattgttttccttctgatgctgttaacttatactcattgaagagtttggatctcagcaataatccaatttgtagcttaccagatttcgtcagaggccttagagggctcaattcaatgttactttgggggtgcagagatctcaaatcacttgtaaggttaccaagagtaagaactctggatgtccacttgtgtgaatccttggaaagtgtaacgtttcaatcgatatcgtgcataccagagtcaataggcttgattgcttacaagtcccaactagttgagattgagtactggttcaagttagaagccattgaaaaagtggatttagaaatgatcaagcttttgtgtttgtgcaacttggaatccatggaacgcatttggatgcacaccccatataacaacgctgaagtgacgatgcttcccatccagggactgtatgaatatggtatatttagcacatttcttcctacaaagggaaacgacgttccagggcagttcagccatacaagaaaagggtcatcacgttcaatgtcatttactgtgcccgcacctttacttcctaatcaaaggatccgaggcttgaacatattctgtgtatatgcaaactacgatgttgatgtcaggtgcattgatccaataataattagagtcaataataagagcaaatgtctgaggtggatctatggaccaacatgttacggcattccaagcagcaaagatgtggtatggttaagccattggaagttgggaaatcgattggaagctggcgatgaagttactgttacagtatttccatttgaaccattccagataaaagagtggggcttccaggttgtgcatgagcaagaaggcaaaataagcaaccaacacaacaccacatatccaggtgataatgacgttattggtaaatattgtacagatttttccgaattataccaggtgatgccgggaacatacttcctctgcggtggacctatgatatatgatagacagtcacatgtattacaaaaagggtcagttttgttcaatcacattattggagattctgatgaaagtgcagcaacaaaagaagcaatgagagaccgaaaaaatttctgcagtcggagtgggcttgttaccattactggtgctgtgtctttgatttgcagtccaggcggcatttcaaaagaaggaaggaaatcccagccaaaaattaaatacactagtttaacccagccaaaagctctacctttactagttcgcaccccggcttgcccccaaatcaccgccgccacgcgctgcgccaagacagcatcagaagctccagaagctggagactga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_8 NB-ARC TIR

Protein Analysis

1217

Amino Acids

136.65

Weight (kDa)

7.03

Isoelectric Point (pI)

40.73

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000036)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G57630 AT1G72930 AT5G38344
fragaria_vesca FvH4_1g27020 FvH4_2g00931 FvH4_2g17330 FvH4_2g17330 FvH4_2g17340 FvH4_2g17350 FvH4_2g20690 FvH4_5g15301 FvH4_5g34194 FvH4_5g38530 FvH4_5g38740 FvH4_5g38740 FvH4_5g38740 FvH4_6g03800 FvH4_7g09791 FvH4_7g09800 FvH4_7g09800 FvH4_7g10510 FvH4_7g10520 FvH4_7g10520 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750
malus_domestica MD02G1217100.v1.1 MD02G1217200.v1.1 MD02G1217400.v1.1 MD02G1217600.v1.1 MD02G1264800.v1.1 MD02G1264900.v1.1 MD02G1302100.v1.1 MD04G1010700.v1.1 MD05G1006800.v1.1 MD05G1140100.v1.1 MD05G1140200.v1.1 MD05G1152200.v1.1 MD07G1073500.v1.1 MD07G1101700.v1.1 MD07G1102200.v1.1 MD07G1103200.v1.1 MD07G1112300.v1.1 MD08G1018200.v1.1 MD08G1018400.v1.1 MD08G1018800.v1.1 MD08G1019000.v1.1 MD08G1019100.v1.1 MD08G1019200.v1.1 MD08G1019300.v1.1 MD08G1019400.v1.1 MD08G1019600.v1.1 MD08G1019900.v1.1 MD08G1020000.v1.1 MD08G1020200.v1.1 MD08G1020500.v1.1 MD08G1020700.v1.1 MD08G1020800.v1.1 MD08G1040700.v1.1 MD11G1112400.v1.1 MD12G1068600.v1.1 MD12G1193200.v1.1 MD13G1050600.v1.1 MD15G1374900.v1.1 MD15G1375100.v1.1 MD15G1416500.v1.1 MD17G1072500.v1.1 MD17G1274200.v1.1 MD17G1274900.v1.1
prunus_persica Prupe.2G121000_v2.0.a1 Prupe.2G121000_v2.0.a1 Prupe.2G125800_v2.0.a1 Prupe.2G126000_v2.0.a1 Prupe.2G126100_v2.0.a1 Prupe.2G126200_v2.0.a1 Prupe.2G126300_v2.0.a1 Prupe.2G126400_v2.0.a1 Prupe.2G126500_v2.0.a1 Prupe.2G126600_v2.0.a1 Prupe.2G126700_v2.0.a1 Prupe.2G126700_v2.0.a1 Prupe.2G126800_v2.0.a1 Prupe.2G126900_v2.0.a1 Prupe.2G127000_v2.0.a1 Prupe.2G127000_v2.0.a1 Prupe.2G127000_v2.0.a1 Prupe.2G127000_v2.0.a1 Prupe.2G135500_v2.0.a1 Prupe.2G135600_v2.0.a1 Prupe.2G135700_v2.0.a1 Prupe.2G135700_v2.0.a1 Prupe.3G009800_v2.0.a1 Prupe.3G010200_v2.0.a1 Prupe.3G131000_v2.0.a1 Prupe.4G260800_v2.0.a1 Prupe.4G260900_v2.0.a1 Prupe.6G083100_v2.0.a1 Prupe.6G083200_v2.0.a1 Prupe.6G083400_v2.0.a1 Prupe.6G132100_v2.0.a1 Prupe.8G184900_v2.0.a1 Prupe.8G185200_v2.0.a1 Prupe.8G185300_v2.0.a1
pyrus_communis pycom02g17870 pycom02g17880 pycom02g19520 pycom02g22610 pycom02g22630 pycom02g22680 pycom05g13540 pycom05g14680 pycom07g04880 pycom07g04890 pycom07g05690 pycom07g05710 pycom07g05720 pycom07g05750 pycom07g05780 pycom07g06300 pycom07g08320 pycom07g08330 pycom07g08350 pycom07g08360 pycom07g08370 pycom07g08410 pycom07g08420 pycom07g08430 pycom07g08440 pycom07g08470 pycom07g08480 pycom07g08520 pycom07g08550 pycom07g08560 pycom07g08640 pycom07g08660 pycom07g08670 pycom07g08680 pycom07g08690 pycom07g08720 pycom07g08730 pycom07g08790 pycom07g08800 pycom07g08810 pycom07g08860 pycom07g08890 pycom07g09720 pycom08g01590 pycom08g01600 pycom08g01620 pycom08g01630 pycom08g01640 pycom10g12630 pycom15g16490 pycom17g07200 pycom17g07210 pycom17g07220 pycom17g11730 pycom17g11740 pycom17g27340 pycom17g27380
rosa_chinensis RchiOBHm_Chr1g0342571 RchiOBHm_Chr1g0346231 RchiOBHm_Chr1g0346831 RchiOBHm_Chr1g0346891 RchiOBHm_Chr1g0348311 RchiOBHm_Chr1g0348321 RchiOBHm_Chr1g0348331 RchiOBHm_Chr1g0348361 RchiOBHm_Chr1g0348371 RchiOBHm_Chr1g0348381 RchiOBHm_Chr1g0348401 RchiOBHm_Chr1g0348411 RchiOBHm_Chr1g0348421 RchiOBHm_Chr1g0348431 RchiOBHm_Chr2g0130881 RchiOBHm_Chr3g0487331 RchiOBHm_Chr5g0060371 RchiOBHm_Chr6g0246491 RchiOBHm_Chr6g0246871 RchiOBHm_Chr6g0250311 RchiOBHm_Chr6g0250781 RchiOBHm_Chr6g0251431 RchiOBHm_Chr6g0281871 RchiOBHm_Chr6g0281881 RchiOBHm_Chr6g0281931 RchiOBHm_Chr6g0281941 RchiOBHm_Chr6g0281951 RchiOBHm_Chr6g0281971 RchiOBHm_Chr6g0281981 RchiOBHm_Chr7g0240541 RchiOBHm_Chr7g0240631 RchiOBHm_Chr7g0240671
rosa_laevigata RLG00000000627 RLG00000000631 RLG00000000641 RLG00000000645 RLG00000000652 RLG00000000662 RLG00000000663 RLG00000000667 RLG00000000670 RLG00000000702 RLG00000001216 RLG00000001219 RLG00000007678 RLG00000012923 RLG00000012996 RLG00000013243 RLG00000017513 RLG00000017514 RLG00000020936 RLG00000022755 RLG00000023013 RLG00000028646 RLG00000028654 RLG00000028662 RLG00000028665 RLG00000028667 RLG00000028711 RLG00000028714 RLG00000028716 RLG00000028770 RLG00000028771 RLG00000028773 RLG00000028778 RLG00000028798 RLG00000028809 RLG00000028813 RLG00000029334 RLG00000030003 RLG00000033910 RLG00000034358 RLG00000035430
rosa_multiflora Rmu_co8031134.1_g000001 Rmu_co8092796.1_g000001 Rmu_co8130156.1_g000001 Rmu_co8325323.1_g000001 Rmu_co8424083.1_g000002 Rmu_sc0000008.1_g000003 Rmu_sc0000008.1_g000011 Rmu_sc0000008.1_g000015 Rmu_sc0000008.1_g000020 Rmu_sc0000091.1_g000015 Rmu_sc0000091.1_g000018 Rmu_sc0000091.1_g000029 Rmu_sc0000091.1_g000031 Rmu_sc0000391.1_g000004 Rmu_sc0001070.1_g000030 Rmu_sc0001293.1_g000016 Rmu_sc0001674.1_g000006 Rmu_sc0001731.1_g000002 Rmu_sc0001731.1_g000003 Rmu_sc0001731.1_g000005 Rmu_sc0001911.1_g000029 Rmu_sc0001913.1_g000038 Rmu_sc0001955.1_g000025 Rmu_sc0001992.1_g000022 Rmu_sc0001992.1_g000028 Rmu_sc0001992.1_g000031 Rmu_sc0002517.1_g000013 Rmu_sc0002517.1_g000017 Rmu_sc0002551.1_g000022 Rmu_sc0002551.1_g000029 Rmu_sc0002551.1_g000038 Rmu_sc0002705.1_g000015 Rmu_sc0002705.1_g000016 Rmu_sc0002882.1_g000055 Rmu_sc0003232.1_g000027 Rmu_sc0003363.1_g000037 Rmu_sc0003600.1_g000054 Rmu_sc0003918.1_g000011 Rmu_sc0004395.1_g000011 Rmu_sc0005071.1_g000004 Rmu_sc0005255.1_g000018 Rmu_sc0005327.1_g000004 Rmu_sc0005597.1_g000007 Rmu_sc0007060.1_g000007 Rmu_sc0007310.1_g000003 Rmu_sc0007383.1_g000014 Rmu_sc0007799.1_g000003 Rmu_sc0008477.1_g000016 Rmu_sc0010151.1_g000009 Rmu_sc0011217.1_g000005 Rmu_sc0016269.1_g000006 Rmu_sc0021495.1_g000001 Rmu_sc0027364.1_g000001 Rmu_sc0029432.1_g000001 Rmu_sc0041386.1_g000001 Rmu_ssc0000126.1_g000023 Rmu_ssc0000126.1_g000027
rosa_roxburghii Rroxscaffold_1G00006130 Rroxscaffold_1G00023320 Rroxscaffold_1G00038770 Rroxscaffold_2G00119800 Rroxscaffold_2G00121860 Rroxscaffold_3G00219780 Rroxscaffold_3G00219890 Rroxscaffold_4G00306740 Rroxscaffold_4G00306820 Rroxscaffold_4G00307000 Rroxscaffold_4G00307010 Rroxscaffold_4G00307020 Rroxscaffold_4G00308030 Rroxscaffold_4G00308070 Rroxscaffold_4G00308450 Rroxscaffold_4G00308460 Rroxscaffold_4G00315320 Rroxscaffold_5G00352470 Rroxscaffold_5G00371420 Rroxscaffold_6G00392300 Rroxscaffold_6G00394870 Rroxscaffold_6G00394890 Rroxscaffold_7G00186700 Rroxscaffold_7G00194980 Rroxscaffold_7G00216840
rosa_rugosa Rorug01G0076100 Rorug01G0128100 Rorug01G0149000.1 Rorug01G0149500.1 Rorug01G0180000 Rorug01G0180100 Rorug01G0182900 Rorug01G0184000 Rorug01G0184100 Rorug01G0184300 Rorug01G0184600 Rorug01G0184700 Rorug01G0184700 Rorug01G0184900 Rorug01G0185000 Rorug01G0185100 Rorug01G0189300 Rorug01G0194100 Rorug01G0194100 Rorug01G0194200 Rorug01G0194400 Rorug01G0194400 Rorug01G0194500 Rorug02G0090400 Rorug02G0090400 Rorug03G0233000 Rorug03G0233100 Rorug05G0178600 Rorug05G0178700 Rorug05G0579200 Rorug06G0144100 Rorug06G0144300 Rorug06G0144300 Rorug06G0179300 Rorug06G0208800 Rorug07G0323500 Rorug07G0337000
rosa_samantha Rh1AG046100 Rh1AG201400 Rh1AG201800 Rh1AG202100 Rh1AG202600 Rh1AG211500 Rh1AG211800 Rh1AG212200 Rh1AG212500 Rh1AG212600 Rh1AG214200 Rh1BG168000 Rh1BG168300 Rh1BG168500 Rh1BG177900 Rh1BG178200 Rh1BG178300 Rh1BG178800 Rh1BG178900 Rh1CG080900 Rh1CG183300 Rh1CG186300 Rh1CG186700 Rh1CG187000 Rh1CG187300 Rh1CG193400 Rh1CG195800 Rh1CG196000 Rh1CG196100 Rh1CG196400 Rh1CG196500 Rh1CG196800 Rh1CG198800 Rh1CG442600 Rh1DG086200 Rh1DG155400 Rh1DG156200 Rh1DG194000 Rh1DG194300 Rh1DG194900 Rh1DG197000 Rh1DG198800 Rh1DG199000 Rh1DG199200 Rh1DG202000 Rh1DG203900 Rh1DG207600 Rh1DG207900 Rh1DG208000 Rh1DG208500 Rh1DG208600 Rh1DG208700 Rh3CG339100 Rh5AG106500 Rh5AG264800 Rh5AG265300 Rh5CG302800 Rh5DG277900 Rh6AG257600 Rh6AG257700 Rh6BG260500 Rh6BG260700 Rh6CG259600 Rh6CG259700 Rh6DG252100 Rh7DG126900
rosa_wichuraiana Rw0G005780 Rw0G007540 Rw0G007550 Rw0G007560 Rw0G009390 Rw1G016900 Rw1G016930 Rw1G016940 Rw1G016970 Rw1G017860 Rw1G017890 Rw1G017900 Rw1G017910 Rw1G017920 Rw1G017960 Rw1G017970 Rw1G017980 Rw1G018150 Rw4G000830 Rw5G009290 Rw5G018950 Rw5G024850 Rw5G024870 Rw5G040460 Rw6G022290 Rw7G041020 Rw7G041200 Rw7G041360 Rw7G041450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 527, 720, 1004
AasI GACNNNNNNGTC 1 cut(s) 290
Acc16I TGCGCA 1 cut(s) 708
Acc36I ACCTGC 1 cut(s) 1124
Acc65I GGTACC 1 cut(s) 1653
AccB1I GGYRCC 2 cut(s) 276, 1653
AccB7I CCANNNNNTGG 1 cut(s) 3644
AccI GTMKAC 1 cut(s) 2043
AccII CGCG 1 cut(s) 3610
AciI CCGC 8 cut(s) 30, 1915, 1941, 2880, 3300, 3489, 3600, 3603
AclI AACGTT 2 cut(s) 1226, 2549
AcoI YGGCCR 2 cut(s) 197, 2252
AcsI RAATTY 4 cut(s) 669, 1336, 2205, 3424
AcuI CTGAAG 3 cut(s) 252, 1766, 2760
AfaI GTAC 8 cut(s) 855, 912, 1593, 1649, 1655, 1725, 2624, 3250
AfiI CCNNNNNNNGG 8 cut(s) 127, 369, 592, 1133, 2250, 2762, 2807, 3644
AflII CTTAAG 1 cut(s) 574
AflIII ACRYGT 3 cut(s) 1644, 3026, 3331
AgeI ACCGGT 1 cut(s) 1650
AhlI ACTAGT 3 cut(s) 2608, 3536, 3568
AleI CACNNNNGTG 1 cut(s) 2526
AloI GAACNNNNNNTCC 2 cut(s) 2802, 2834
Alw26I GTCTC 5 cut(s) 231, 1966, 2108, 3408, 3642
AlwNI CAGNNNCTG 2 cut(s) 2767, 3644
Ama87I CYCGRG 1 cut(s) 176
AoxI GGCC 4 cut(s) 129, 197, 2252, 2431
ApeKI GCWGC 4 cut(s) 452, 3045, 3392, 3612
ApoI RAATTY 4 cut(s) 669, 1336, 2205, 3424
ArsI GACNNNNNNTTYG 2 cut(s) 2058, 2090
AsiGI ACCGGT 1 cut(s) 1650
Asp700I GAANNNNTTC 3 cut(s) 1524, 1749, 2921
Asp718I GGTACC 1 cut(s) 1653
AspLEI GCGC 3 cut(s) 709, 3612, 3617
AspS9I GGNCC 4 cut(s) 1120, 1957, 3020, 3305
AsuC2I CCSGG 2 cut(s) 3282, 3581
AsuHPI GGTGA 7 cut(s) 101, 110, 1495, 1955, 3233, 3286, 3589
AvaI CYCGRG 1 cut(s) 176
AvaII GGWCC 4 cut(s) 1120, 1957, 3020, 3305
BaeGI GKGCMC 1 cut(s) 2880
BalI TGGCCA 1 cut(s) 2254
BamHI GGATCC 2 cut(s) 1570, 2904
BanI GGYRCC 2 cut(s) 276, 1653
BanII GRGCYC 1 cut(s) 2445
BarI GAAGNNNNNNTAC 2 cut(s) 2027, 2059
BbsI GAAGAC 1 cut(s) 2306
BbvI GCAGC 4 cut(s) 464, 3057, 3404, 3599
BccI CCATC 8 cut(s) 267, 367, 635, 1131, 1356, 1900, 2195, 2765
BceAI ACGGC 1 cut(s) 3049
BciVI GTATCC 1 cut(s) 203
BclI TGATCA 4 cut(s) 19, 934, 1330, 2667
BcnI CCSGG 2 cut(s) 3282, 3581
BcoDI GTCTC 5 cut(s) 231, 1966, 2108, 3408, 3642
BcuI ACTAGT 3 cut(s) 2608, 3536, 3568
BfmI CTRYAG 3 cut(s) 206, 806, 3430
BfrI CTTAAG 1 cut(s) 574
BfuAI ACCTGC 1 cut(s) 1124
BfuI GTATCC 1 cut(s) 203
BglII AGATCT 2 cut(s) 472, 2473
BisI GCNGC 7 cut(s) 30, 453, 3046, 3393, 3490, 3603, 3613
BlsI GCNGC 7 cut(s) 31, 454, 3047, 3394, 3491, 3604, 3614
BmcAI AGTACT 2 cut(s) 912, 2624
Bme18I GGWCC 4 cut(s) 1120, 1957, 3020, 3305
BmeT110I CYCGRG 1 cut(s) 176
BmgT120I GGNCC 4 cut(s) 1120, 1957, 3020, 3305
BmiI GGNNCC 6 cut(s) 278, 1545, 1572, 1655, 1959, 2906
BpiI GAAGAC 1 cut(s) 2306
BpmI CTGGAG 3 cut(s) 449, 1109, 3621
BpuEI CTTGAG 3 cut(s) 97, 1306, 1879
BpuMI CCSGG 2 cut(s) 3282, 3581
Bsa29I ATCGAT 2 cut(s) 2558, 3088
BsaBI GATNNNNATC 2 cut(s) 354, 933
BsaI GGTCTC 1 cut(s) 3408
BsaJI CCNNGG 8 cut(s) 132, 1755, 2535, 2700, 2761, 2822, 2908, 3579
BsaWI WCCGGW 2 cut(s) 1650, 2129
Bsc4I CCNNNNNNNGG 8 cut(s) 127, 369, 592, 1133, 2250, 2762, 2807, 3644
Bse118I RCCGGY 1 cut(s) 1650
Bse1I ACTGG 5 cut(s) 1092, 1127, 1738, 2630, 3463
Bse3DI GCAATG 2 cut(s) 702, 3414
Bse8I GATNNNNATC 2 cut(s) 354, 933
BseCI ATCGAT 2 cut(s) 2558, 3088
BseDI CCNNGG 8 cut(s) 132, 1755, 2535, 2700, 2761, 2822, 2908, 3579
BseJI GATNNNNATC 2 cut(s) 354, 933
BseLI CCNNNNNNNGG 8 cut(s) 127, 369, 592, 1133, 2250, 2762, 2807, 3644
BseMI GCAATG 2 cut(s) 702, 3414
BseMII CTCAG 3 cut(s) 1691, 2404, 2996
BseNI ACTGG 5 cut(s) 1092, 1127, 1738, 2630, 3463
BseRI GAGGAG 1 cut(s) 198
BseSI GKGCMC 1 cut(s) 2880
BseXI GCAGC 4 cut(s) 464, 3057, 3404, 3599
BseYI CCCAGC 2 cut(s) 3516, 3546
BsgI GTGCAG 3 cut(s) 2278, 2488, 3411
Bsh1236I CGCG 1 cut(s) 3610
BshFI GGCC 4 cut(s) 131, 199, 2254, 2433
BshNI GGYRCC 2 cut(s) 276, 1653
BshTI ACCGGT 1 cut(s) 1650
BshVI ATCGAT 2 cut(s) 2558, 3088
BsiHKCI CYCGRG 1 cut(s) 176
BsiSI CCGG 6 cut(s) 196, 1547, 1651, 2130, 3281, 3581
BslFI GGGAC 3 cut(s) 1943, 2587, 2778
BslI CCNNNNNNNGG 8 cut(s) 127, 369, 592, 1133, 2250, 2762, 2807, 3644
BsmAI GTCTC 5 cut(s) 231, 1966, 2108, 3408, 3642
BsmFI GGGAC 3 cut(s) 1943, 2587, 2778
BsmI GAATGC 5 cut(s) 606, 1015, 1105, 1267, 3036
BsnI GGCC 4 cut(s) 131, 199, 2254, 2433
Bso31I GGTCTC 1 cut(s) 3408
BsoBI CYCGRG 1 cut(s) 176
Bsp1286I GDGCHC 2 cut(s) 2445, 2880
Bsp1407I TGTACA 2 cut(s) 1723, 3248
Bsp19I CCATGG 1 cut(s) 2700
BspACI CCGC 8 cut(s) 30, 1915, 1941, 2880, 3300, 3489, 3600, 3603
BspANI GGCC 4 cut(s) 131, 199, 2254, 2433
BspCNI CTCAG 3 cut(s) 1692, 2403, 2997
BspDI ATCGAT 2 cut(s) 2558, 3088
BspFNI CGCG 1 cut(s) 3610
BspHI TCATGA 2 cut(s) 22, 294
BspLI GGNNCC 6 cut(s) 278, 1545, 1572, 1655, 1959, 2906
BspMAI CTGCAG 1 cut(s) 3434
BspMI ACCTGC 1 cut(s) 1124
BspQI GCTCTTC 1 cut(s) 1197
BspT107I GGYRCC 2 cut(s) 276, 1653
BspTI CTTAAG 1 cut(s) 574
BspTNI GGTCTC 1 cut(s) 3408
BsrDI GCAATG 2 cut(s) 702, 3414
BsrFI RCCGGY 1 cut(s) 1650
BsrGI TGTACA 2 cut(s) 1723, 3248
BsrI ACTGG 5 cut(s) 1092, 1127, 1738, 2630, 3463
BssAI RCCGGY 1 cut(s) 1650
BssECI CCNNGG 8 cut(s) 132, 1755, 2535, 2700, 2761, 2822, 2908, 3579
BssNAI GTATAC 1 cut(s) 2044
BssT1I CCWWGG 4 cut(s) 132, 1755, 2535, 2700
Bst1107I GTATAC 1 cut(s) 2044
Bst4CI ACNGT 9 cut(s) 225, 1172, 1185, 1277, 2769, 2875, 3115, 3121, 3327
Bst6I CTCTTC 4 cut(s) 40, 1197, 1510, 2372
BstAFI CTTAAG 1 cut(s) 574
BstAUI TGTACA 2 cut(s) 1723, 3248
BstC8I GCNNGC 7 cut(s) 481, 1292, 1490, 1778, 2880, 3100, 3586
BstDEI CTNAG 8 cut(s) 796, 1295, 1700, 2029, 2309, 2390, 2435, 3005
BstDSI CCRYGG 1 cut(s) 2700
BstEII GGTNACC 1 cut(s) 2493
BstFNI CGCG 1 cut(s) 3610
BstHHI GCGC 3 cut(s) 709, 3612, 3617
BstMAI GTCTC 5 cut(s) 231, 1966, 2108, 3408, 3642
BstMWI GCNNNNNNNGC 6 cut(s) 3042, 3192, 3486, 3623, 3632, 3641
BstNSI RCATGY 4 cut(s) 1492, 1648, 3030, 3335
BstPI GGTNACC 1 cut(s) 2493
BstSFI CTRYAG 3 cut(s) 206, 806, 3430
BstSLI GKGCMC 1 cut(s) 2880
BstUI CGCG 1 cut(s) 3610
BstV1I GCAGC 4 cut(s) 464, 3057, 3404, 3599
BstV2I GAAGAC 1 cut(s) 2306
BstX2I RGATCY 7 cut(s) 472, 1570, 1902, 2386, 2473, 2904, 3012
BstYI RGATCY 7 cut(s) 472, 1570, 1902, 2386, 2473, 2904, 3012
BstZ17I GTATAC 1 cut(s) 2044
Bsu15I ATCGAT 2 cut(s) 2558, 3088
BsuI GTATCC 1 cut(s) 203
BsuRI GGCC 4 cut(s) 131, 199, 2254, 2433
BsuTUI ATCGAT 2 cut(s) 2558, 3088
BtgI CCRYGG 1 cut(s) 2700
BtgZI GCGATG 1 cut(s) 3117
BtsIMutI CAGTG 3 cut(s) 1085, 1168, 1282
BveI ACCTGC 1 cut(s) 1124
Cac8I GCNNGC 7 cut(s) 481, 1292, 1490, 1778, 2880, 3100, 3586
CaiI CAGNNNCTG 2 cut(s) 2767, 3644
CciI TCATGA 2 cut(s) 22, 294
CfoI GCGC 3 cut(s) 709, 3612, 3617
Cfr10I RCCGGY 1 cut(s) 1650
Cfr13I GGNCC 4 cut(s) 1120, 1957, 3020, 3305
ClaI ATCGAT 2 cut(s) 2558, 3088
CsiI ACCWGGT 2 cut(s) 591, 3270
Csp6I GTAC 8 cut(s) 854, 911, 1592, 1648, 1654, 1724, 2623, 3249
CspAI ACCGGT 1 cut(s) 1650
CviQI GTAC 8 cut(s) 854, 911, 1592, 1648, 1654, 1724, 2623, 3249
DdeI CTNAG 8 cut(s) 796, 1295, 1700, 2029, 2309, 2390, 2435, 3005
DraI TTTAAA 1 cut(s) 1071
DrdI GACNNNNNNGTC 1 cut(s) 290
DseDI GACNNNNNNGTC 1 cut(s) 290
EaeI YGGCCR 2 cut(s) 197, 2252
Eam1104I CTCTTC 4 cut(s) 40, 1197, 1510, 2372
EarI CTCTTC 4 cut(s) 40, 1197, 1510, 2372
EciI GGCGGA 1 cut(s) 1904
Eco130I CCWWGG 4 cut(s) 132, 1755, 2535, 2700
Eco147I AGGCCT 1 cut(s) 2433
Eco24I GRGCYC 1 cut(s) 2445
Eco31I GGTCTC 1 cut(s) 3408
Eco32I GATATC 1 cut(s) 2562
Eco47I GGWCC 4 cut(s) 1120, 1957, 3020, 3305
Eco57I CTGAAG 3 cut(s) 252, 1766, 2760
Eco88I CYCGRG 1 cut(s) 176
Eco91I GGTNACC 1 cut(s) 2493
EcoO65I GGTNACC 1 cut(s) 2493
EcoRV GATATC 1 cut(s) 2562
EcoT14I CCWWGG 4 cut(s) 132, 1755, 2535, 2700
EcoT22I ATGCAT 1 cut(s) 1494
EcoT38I GRGCYC 1 cut(s) 2445
ErhI CCWWGG 4 cut(s) 132, 1755, 2535, 2700
FalI AAGNNNNNCTT 4 cut(s) 543, 575, 900, 932
FaqI GGGAC 3 cut(s) 1943, 2587, 2778
FauI CCCGC 1 cut(s) 2887
FbaI TGATCA 4 cut(s) 19, 934, 1330, 2667
FblI GTMKAC 1 cut(s) 2043
Fnu4HI GCNGC 7 cut(s) 30, 453, 3046, 3393, 3490, 3603, 3613
FriOI GRGCYC 1 cut(s) 2445
Fsp4HI GCNGC 7 cut(s) 30, 453, 3046, 3393, 3490, 3603, 3613
FspI TGCGCA 1 cut(s) 708
GlaI GCGC 3 cut(s) 708, 3611, 3616
GluI GCNGC 7 cut(s) 30, 453, 3046, 3393, 3490, 3603, 3613
GsaI CCCAGC 2 cut(s) 3520, 3550
GsuI CTGGAG 3 cut(s) 449, 1109, 3621
HaeIII GGCC 4 cut(s) 131, 199, 2254, 2433
HapII CCGG 6 cut(s) 196, 1547, 1651, 2130, 3281, 3581
HhaI GCGC 3 cut(s) 709, 3612, 3617
Hin6I GCGC 3 cut(s) 707, 3610, 3615
HinP1I GCGC 3 cut(s) 707, 3610, 3615
HincII GTYRAC 4 cut(s) 139, 1048, 1165, 2362
HindII GTYRAC 4 cut(s) 139, 1048, 1165, 2362
HindIII AAGCTT 3 cut(s) 1292, 1996, 2672
HpaI GTTAAC 3 cut(s) 1048, 1165, 2362
HpaII CCGG 6 cut(s) 196, 1547, 1651, 2130, 3281, 3581
HphI GGTGA 7 cut(s) 101, 110, 1495, 1955, 3233, 3286, 3589
Hpy166II GTNNAC 7 cut(s) 139, 1048, 1165, 2044, 2362, 2521, 3305
Hpy8I GTNNAC 7 cut(s) 139, 1048, 1165, 2044, 2362, 2521, 3305
Hpy99I CGWCG 2 cut(s) 1145, 2819
HpyCH4III ACNGT 9 cut(s) 225, 1172, 1185, 1277, 2769, 2875, 3115, 3121, 3327
HpyCH4IV ACGT 8 cut(s) 69, 1050, 1140, 1226, 2549, 2817, 2857, 3231
HpyF10VI GCNNNNNNNGC 6 cut(s) 3042, 3192, 3486, 3623, 3632, 3641
HpyF3I CTNAG 8 cut(s) 796, 1295, 1700, 2029, 2309, 2390, 2435, 3005
HpySE526I ACGT 8 cut(s) 69, 1050, 1140, 1226, 2549, 2817, 2857, 3231
HspAI GCGC 3 cut(s) 707, 3610, 3615
KpnI GGTACC 1 cut(s) 1657
Ksp22I TGATCA 4 cut(s) 19, 934, 1330, 2667
KspAI GTTAAC 3 cut(s) 1048, 1165, 2362
LguI GCTCTTC 1 cut(s) 1197
LmnI GCTCC 4 cut(s) 14, 1090, 1543, 3640
Lsp1109I GCAGC 4 cut(s) 464, 3057, 3404, 3599
MabI ACCWGGT 2 cut(s) 591, 3270
MaeII ACGT 8 cut(s) 69, 1050, 1140, 1226, 2549, 2817, 2857, 3231
MfeI CAATTG 2 cut(s) 1422, 1623
MflI RGATCY 7 cut(s) 472, 1570, 1902, 2386, 2473, 2904, 3012
MhlI GDGCHC 2 cut(s) 2445, 2880
MlsI TGGCCA 1 cut(s) 2254
MluNI TGGCCA 1 cut(s) 2254
MlyI GAGTC 4 cut(s) 524, 1304, 2585, 2991
MmeI TCCRAC 7 cut(s) 63, 244, 577, 1735, 1773, 2002, 3416
Mox20I TGGCCA 1 cut(s) 2254
Mph1103I ATGCAT 1 cut(s) 1494
MroXI GAANNNNTTC 3 cut(s) 1524, 1749, 2921
MscI TGGCCA 1 cut(s) 2254
MslI CAYNNNNRTG 4 cut(s) 1923, 2096, 2526, 2714
Msp20I TGGCCA 1 cut(s) 2254
MspCI CTTAAG 1 cut(s) 574
MspI CCGG 6 cut(s) 196, 1547, 1651, 2130, 3281, 3581
MteI GCGCNGCGC 1 cut(s) 3613
MunI CAATTG 2 cut(s) 1422, 1623
Mva1269I GAATGC 5 cut(s) 606, 1015, 1105, 1267, 3036
MvnI CGCG 1 cut(s) 3610
MwoI GCNNNNNNNGC 6 cut(s) 3042, 3192, 3486, 3623, 3632, 3641
NciI CCSGG 2 cut(s) 3282, 3581
NcoI CCATGG 1 cut(s) 2700
NlaIV GGNNCC 6 cut(s) 278, 1545, 1572, 1655, 1959, 2906
NmuCI GTSAC 5 cut(s) 1505, 1943, 2224, 2743, 3327
NsbI TGCGCA 1 cut(s) 708
NsiI ATGCAT 1 cut(s) 1494
NspI RCATGY 4 cut(s) 1492, 1648, 3030, 3335
OliI CACNNNNGTG 1 cut(s) 2526
PaeI GCATGC 1 cut(s) 1492
PaeR7I CTCGAG 1 cut(s) 176
PagI TCATGA 2 cut(s) 22, 294
PceI AGGCCT 1 cut(s) 2433
PciI ACATGT 3 cut(s) 1644, 3026, 3331
PciSI GCTCTTC 1 cut(s) 1197
PcsI WCGNNNNNNNCGW 4 cut(s) 157, 1056, 1223, 2555
PctI GAATGC 5 cut(s) 606, 1015, 1105, 1267, 3036
PdmI GAANNNNTTC 3 cut(s) 1524, 1749, 2921
PfeI GAWTC 9 cut(s) 1501, 1535, 1580, 1796, 2015, 2246, 2531, 2696, 3377
PflMI CCANNNNNTGG 1 cut(s) 3644
PfoI TCCNGGA 1 cut(s) 985
PinAI ACCGGT 1 cut(s) 1650
PkrI GCNGC 7 cut(s) 31, 454, 3047, 3394, 3491, 3604, 3614
PleI GAGTC 4 cut(s) 523, 1304, 2584, 2990
PpsI GAGTC 4 cut(s) 523, 1304, 2584, 2990
PscI ACATGT 3 cut(s) 1644, 3026, 3331
PsiI TTATAA 3 cut(s) 527, 720, 1004
Psp1406I AACGTT 2 cut(s) 1226, 2549
PspEI GGTNACC 1 cut(s) 2493
PspFI CCCAGC 2 cut(s) 3516, 3546
PspN4I GGNNCC 6 cut(s) 278, 1545, 1572, 1655, 1959, 2906
PspPI GGNCC 4 cut(s) 1120, 1957, 3020, 3305
PstI CTGCAG 1 cut(s) 3434
PstNI CAGNNNCTG 2 cut(s) 2767, 3644
PsuI RGATCY 7 cut(s) 472, 1570, 1902, 2386, 2473, 2904, 3012
RsaI GTAC 8 cut(s) 855, 912, 1593, 1649, 1655, 1725, 2624, 3250
RsaNI GTAC 8 cut(s) 854, 911, 1592, 1648, 1654, 1724, 2623, 3249
RseI CAYNNNNRTG 4 cut(s) 1923, 2096, 2526, 2714
SapI GCTCTTC 1 cut(s) 1197
SatI GCNGC 7 cut(s) 30, 453, 3046, 3393, 3490, 3603, 3613
Sau96I GGNCC 4 cut(s) 1120, 1957, 3020, 3305
ScaI AGTACT 2 cut(s) 912, 2624
SchI GAGTC 4 cut(s) 524, 1304, 2585, 2991
SduI GDGCHC 2 cut(s) 2445, 2880
SexAI ACCWGGT 2 cut(s) 591, 3270
SfcI CTRYAG 3 cut(s) 206, 806, 3430
Sfr274I CTCGAG 1 cut(s) 176
SinI GGWCC 4 cut(s) 1120, 1957, 3020, 3305
SlaI CTCGAG 1 cut(s) 176
SmiMI CAYNNNNRTG 4 cut(s) 1923, 2096, 2526, 2714
SmlI CTYRAG 5 cut(s) 76, 176, 574, 1285, 1858
SmoI CTYRAG 5 cut(s) 76, 176, 574, 1285, 1858
SpeI ACTAGT 3 cut(s) 2608, 3536, 3568
SphI GCATGC 1 cut(s) 1492
SseBI AGGCCT 1 cut(s) 2433
SsiI CCGC 8 cut(s) 30, 1915, 1941, 2880, 3300, 3489, 3600, 3603
SspI AATATT 3 cut(s) 342, 1398, 3245
StuI AGGCCT 1 cut(s) 2433
StyI CCWWGG 4 cut(s) 132, 1755, 2535, 2700
TaaI ACNGT 9 cut(s) 225, 1172, 1185, 1277, 2769, 2875, 3115, 3121, 3327
TaiI ACGT 8 cut(s) 72, 1053, 1143, 1229, 2552, 2820, 2860, 3234
TaqII GACCGA 1 cut(s) 3432
TatI WGTACW 6 cut(s) 853, 910, 1591, 1723, 2622, 3248
TauI GCSGC 3 cut(s) 32, 3492, 3605
TfiI GAWTC 9 cut(s) 1501, 1535, 1580, 1796, 2015, 2246, 2531, 2696, 3377
TscAI CASTG 3 cut(s) 1092, 1175, 1282
TseFI GTSAC 5 cut(s) 1505, 1943, 2224, 2743, 3327
TseI GCWGC 4 cut(s) 452, 3045, 3392, 3612
Tsp45I GTSAC 5 cut(s) 1505, 1943, 2224, 2743, 3327
TspGWI ACGGA 1 cut(s) 1779
TspRI CASTG 3 cut(s) 1092, 1175, 1282
Van91I CCANNNNNTGG 1 cut(s) 3644
Vha464I CTTAAG 1 cut(s) 574
VpaK11BI GGWCC 4 cut(s) 1120, 1957, 3020, 3305
XapI RAATTY 4 cut(s) 669, 1336, 2205, 3424
XbaI TCTAGA 2 cut(s) 1837, 1966
XceI RCATGY 4 cut(s) 1492, 1648, 3030, 3335
XcmI CCANNNNNNNNNTGG 3 cut(s) 709, 2018, 2650
XhoI CTCGAG 1 cut(s) 176
XmiI GTMKAC 1 cut(s) 2043
XmnI GAANNNNTTC 3 cut(s) 1524, 1749, 2921
ZrmI AGTACT 2 cut(s) 912, 2624
Zsp2I ATGCAT 1 cut(s) 1494
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.