No description available
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 22 - 190 | 7.1e-53 | TIR domain |
| TIR_2 | PF13676 | 24 - 122 | 7.5e-16 | TIR domain |
| NB-ARC | PF00931 | 204 - 373 | 2.5e-24 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 444 - 513 | 1.8e-19 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_13 | PF23286 | 638 - 844 | 2.1e-07 | Disease resistance protein RPS4B-like, leucine-rich repeats |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 1572 |
| AccB1I | GGYRCC | 1 cut(s) | 276 |
| AccI | GTMKAC | 3 cut(s) | 936, 1564, 1896 |
| AccII | CGCG | 1 cut(s) | 263 |
| AccIII | TCCGGA | 1 cut(s) | 269 |
| AciI | CCGC | 2 cut(s) | 442, 1130 |
| AclWI | GGATC | 4 cut(s) | 292, 353, 655, 1924 |
| AcoI | YGGCCR | 1 cut(s) | 1117 |
| AcsI | RAATTY | 4 cut(s) | 730, 1774, 1811, 1910 |
| AcuI | CTGAAG | 1 cut(s) | 1155 |
| AcyI | GRCGYC | 1 cut(s) | 1573 |
| AfaI | GTAC | 8 cut(s) | 515, 963, 1596, 1615, 1752, 2072, 2245, 2600 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 372, 1136, 1664, 2486 |
| AflII | CTTAAG | 1 cut(s) | 1099 |
| AflIII | ACRYGT | 3 cut(s) | 261, 1747, 2115 |
| AjiI | CACGTC | 1 cut(s) | 1748 |
| AjnI | CCWGG | 4 cut(s) | 199, 1119, 1638, 2239 |
| Alw21I | GWGCWC | 2 cut(s) | 861, 1098 |
| Alw26I | GTCTC | 3 cut(s) | 1679, 2056, 2438 |
| Alw44I | GTGCAC | 1 cut(s) | 857 |
| AlwI | GGATC | 4 cut(s) | 292, 353, 655, 1924 |
| Ama87I | CYCGRG | 2 cut(s) | 21, 612 |
| Aor13HI | TCCGGA | 1 cut(s) | 269 |
| AoxI | GGCC | 4 cut(s) | 1117, 1805, 1954, 2237 |
| ApaLI | GTGCAC | 1 cut(s) | 857 |
| ApeKI | GCWGC | 2 cut(s) | 17, 753 |
| ApoI | RAATTY | 4 cut(s) | 730, 1774, 1811, 1910 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 1343, 1527, 2004 |
| AspLEI | GCGC | 2 cut(s) | 7, 1039 |
| AspS9I | GGNCC | 5 cut(s) | 325, 946, 1054, 1123, 1667 |
| AsuC2I | CCSGG | 1 cut(s) | 990 |
| AsuHPI | GGTGA | 7 cut(s) | 145, 559, 566, 1235, 1474, 1498, 2582 |
| AsuII | TTCGAA | 1 cut(s) | 251 |
| AvaI | CYCGRG | 2 cut(s) | 21, 612 |
| AvaII | GGWCC | 5 cut(s) | 325, 946, 1054, 1123, 1667 |
| BaeGI | GKGCMC | 1 cut(s) | 861 |
| BalI | TGGCCA | 1 cut(s) | 1119 |
| BanI | GGYRCC | 1 cut(s) | 276 |
| BanII | GRGCYC | 1 cut(s) | 1098 |
| BauI | CACGAG | 1 cut(s) | 413 |
| BbsI | GAAGAC | 3 cut(s) | 99, 337, 704 |
| Bbv12I | GWGCWC | 2 cut(s) | 861, 1098 |
| BbvI | GCAGC | 2 cut(s) | 29, 765 |
| BceAI | ACGGC | 4 cut(s) | 795, 1294, 1769, 2252 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 421, 455 |
| BciT130I | CCWGG | 4 cut(s) | 201, 1121, 1640, 2241 |
| BcnI | CCSGG | 1 cut(s) | 990 |
| BcoDI | GTCTC | 3 cut(s) | 1679, 2056, 2438 |
| BfmI | CTRYAG | 2 cut(s) | 206, 1782 |
| BfoI | RGCGCY | 1 cut(s) | 8 |
| BfrI | CTTAAG | 1 cut(s) | 1099 |
| BisI | GCNGC | 2 cut(s) | 18, 754 |
| BlsI | GCNGC | 2 cut(s) | 19, 755 |
| BmcAI | AGTACT | 3 cut(s) | 963, 1596, 2600 |
| Bme1390I | CCNGG | 5 cut(s) | 201, 990, 1121, 1640, 2241 |
| Bme18I | GGWCC | 5 cut(s) | 325, 946, 1054, 1123, 1667 |
| BmeT110I | CYCGRG | 2 cut(s) | 21, 612 |
| BmgBI | CACGTC | 1 cut(s) | 1748 |
| BmgT120I | GGNCC | 5 cut(s) | 325, 946, 1054, 1123, 1667 |
| BmiI | GGNNCC | 2 cut(s) | 278, 2426 |
| BmrFI | CCNGG | 5 cut(s) | 201, 990, 1121, 1640, 2241 |
| BmsI | GCATC | 7 cut(s) | 399, 946, 1445, 1663, 1707, 2094, 2311 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1892 |
| BpiI | GAAGAC | 3 cut(s) | 99, 337, 704 |
| BplI | GAGNNNNNCTC | 3 cut(s) | 36, 1933, 1965 |
| BpmI | CTGGAG | 1 cut(s) | 1197 |
| Bpu14I | TTCGAA | 1 cut(s) | 251 |
| BpuEI | CTTGAG | 2 cut(s) | 97, 197 |
| BpuMI | CCSGG | 1 cut(s) | 990 |
| BsaBI | GATNNNNATC | 2 cut(s) | 357, 602 |
| BsaHI | GRCGYC | 1 cut(s) | 1573 |
| BsaJI | CCNNGG | 4 cut(s) | 321, 576, 1627, 1968 |
| BsaWI | WCCGGW | 2 cut(s) | 269, 1335 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1719, 1749, 2413, 2443 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 372, 1136, 1664, 2486 |
| Bse1I | ACTGG | 3 cut(s) | 341, 1180, 1615 |
| Bse3DI | GCAATG | 1 cut(s) | 1353 |
| Bse8I | GATNNNNATC | 2 cut(s) | 357, 602 |
| BseAI | TCCGGA | 1 cut(s) | 269 |
| BseBI | CCWGG | 4 cut(s) | 201, 1121, 1640, 2241 |
| BseDI | CCNNGG | 4 cut(s) | 321, 576, 1627, 1968 |
| BseJI | GATNNNNATC | 2 cut(s) | 357, 602 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 372, 1136, 1664, 2486 |
| BseMI | GCAATG | 1 cut(s) | 1353 |
| BseMII | CTCAG | 3 cut(s) | 437, 1542, 1589 |
| BseNI | ACTGG | 3 cut(s) | 341, 1180, 1615 |
| BseRI | GAGGAG | 2 cut(s) | 198, 2434 |
| BseSI | GKGCMC | 1 cut(s) | 861 |
| BseXI | GCAGC | 2 cut(s) | 29, 765 |
| Bsh1236I | CGCG | 1 cut(s) | 263 |
| BshFI | GGCC | 4 cut(s) | 1119, 1807, 1956, 2239 |
| BshNI | GGYRCC | 1 cut(s) | 276 |
| BsiHKAI | GWGCWC | 2 cut(s) | 861, 1098 |
| BsiHKCI | CYCGRG | 2 cut(s) | 21, 612 |
| BsiSI | CCGG | 4 cut(s) | 220, 270, 990, 1336 |
| BslFI | GGGAC | 1 cut(s) | 1391 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 372, 1136, 1664, 2486 |
| BsmAI | GTCTC | 3 cut(s) | 1679, 2056, 2438 |
| BsmFI | GGGAC | 1 cut(s) | 1391 |
| BsmI | GAATGC | 2 cut(s) | 1434, 1648 |
| BsnI | GGCC | 4 cut(s) | 1119, 1807, 1956, 2239 |
| BsoBI | CYCGRG | 2 cut(s) | 21, 612 |
| Bsp119I | TTCGAA | 1 cut(s) | 251 |
| Bsp1286I | GDGCHC | 2 cut(s) | 861, 1098 |
| Bsp13I | TCCGGA | 1 cut(s) | 269 |
| Bsp143I | GATC | 7 cut(s) | 297, 358, 475, 647, 976, 1498, 1929 |
| BspACI | CCGC | 2 cut(s) | 442, 1130 |
| BspANI | GGCC | 4 cut(s) | 1119, 1807, 1956, 2239 |
| BspCNI | CTCAG | 3 cut(s) | 436, 1543, 1590 |
| BspEI | TCCGGA | 1 cut(s) | 269 |
| BspFNI | CGCG | 1 cut(s) | 263 |
| BspHI | TCATGA | 3 cut(s) | 294, 1287, 2038 |
| BspLI | GGNNCC | 2 cut(s) | 278, 2426 |
| BspPI | GGATC | 4 cut(s) | 292, 353, 655, 1924 |
| BspQI | GCTCTTC | 2 cut(s) | 1200, 1539 |
| BspT104I | TTCGAA | 1 cut(s) | 251 |
| BspT107I | GGYRCC | 1 cut(s) | 276 |
| BspTI | CTTAAG | 1 cut(s) | 1099 |
| BsrDI | GCAATG | 1 cut(s) | 1353 |
| BsrI | ACTGG | 3 cut(s) | 341, 1180, 1615 |
| BssECI | CCNNGG | 4 cut(s) | 321, 576, 1627, 1968 |
| BssMI | GATC | 7 cut(s) | 297, 358, 475, 647, 976, 1498, 1929 |
| BssNI | GRCGYC | 1 cut(s) | 1573 |
| BssSI | CACGAG | 1 cut(s) | 413 |
| BssT1I | CCWWGG | 2 cut(s) | 576, 1627 |
| Bst2BI | CACGAG | 1 cut(s) | 413 |
| Bst2UI | CCWGG | 4 cut(s) | 201, 1121, 1640, 2241 |
| Bst4CI | ACNGT | 6 cut(s) | 62, 1316, 1429, 1667, 1690, 1969 |
| Bst6I | CTCTTC | 3 cut(s) | 1200, 1513, 1539 |
| BstACI | GRCGYC | 1 cut(s) | 1573 |
| BstAFI | CTTAAG | 1 cut(s) | 1099 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 470 |
| BstBI | TTCGAA | 1 cut(s) | 251 |
| BstC8I | GCNNGC | 7 cut(s) | 471, 572, 1106, 1110, 2027, 2123, 2660 |
| BstDSI | CCRYGG | 1 cut(s) | 1968 |
| BstEII | GGTNACC | 1 cut(s) | 56 |
| BstFNI | CGCG | 1 cut(s) | 263 |
| BstH2I | RGCGCY | 1 cut(s) | 8 |
| BstHHI | GCGC | 2 cut(s) | 7, 1039 |
| BstKTI | GATC | 7 cut(s) | 300, 361, 478, 650, 979, 1501, 1932 |
| BstMAI | GTCTC | 3 cut(s) | 1679, 2056, 2438 |
| BstMBI | GATC | 7 cut(s) | 297, 358, 475, 647, 976, 1498, 1929 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 470, 479, 1036 |
| BstNI | CCWGG | 4 cut(s) | 201, 1121, 1640, 2241 |
| BstNSI | RCATGY | 6 cut(s) | 574, 1112, 1495, 1648, 2119, 2125 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1892 |
| BstPI | GGTNACC | 1 cut(s) | 56 |
| BstSCI | CCNGG | 5 cut(s) | 199, 988, 1119, 1638, 2239 |
| BstSFI | CTRYAG | 2 cut(s) | 206, 1782 |
| BstSLI | GKGCMC | 1 cut(s) | 861 |
| BstUI | CGCG | 1 cut(s) | 263 |
| BstV1I | GCAGC | 2 cut(s) | 29, 765 |
| BstV2I | GAAGAC | 3 cut(s) | 99, 337, 704 |
| BstX2I | RGATCY | 1 cut(s) | 1929 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1952 |
| BstYI | RGATCY | 1 cut(s) | 1929 |
| BsuRI | GGCC | 4 cut(s) | 1119, 1807, 1956, 2239 |
| BtgI | CCRYGG | 1 cut(s) | 1968 |
| BtrI | CACGTC | 1 cut(s) | 1748 |
| BtsIMutI | CAGTG | 1 cut(s) | 874 |
| Cac8I | GCNNGC | 7 cut(s) | 471, 572, 1106, 1110, 2027, 2123, 2660 |
| CciI | TCATGA | 3 cut(s) | 294, 1287, 2038 |
| CfoI | GCGC | 2 cut(s) | 7, 1039 |
| Cfr13I | GGNCC | 5 cut(s) | 325, 946, 1054, 1123, 1667 |
| CseI | GACGC | 2 cut(s) | 252, 1562 |
| Csp6I | GTAC | 8 cut(s) | 514, 962, 1595, 1614, 1751, 2071, 2244, 2599 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1340, 1375 |
| CviQI | GTAC | 8 cut(s) | 514, 962, 1595, 1614, 1751, 2071, 2244, 2599 |
| DpnI | GATC | 7 cut(s) | 299, 360, 477, 649, 978, 1500, 1931 |
| DpnII | GATC | 7 cut(s) | 297, 358, 475, 647, 976, 1498, 1929 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1572 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1572 |
| EaeI | YGGCCR | 1 cut(s) | 1117 |
| Eam1104I | CTCTTC | 3 cut(s) | 1200, 1513, 1539 |
| EarI | CTCTTC | 3 cut(s) | 1200, 1513, 1539 |
| EciI | GGCGGA | 1 cut(s) | 1119 |
| Ecl136II | GAGCTC | 1 cut(s) | 1096 |
| Eco130I | CCWWGG | 2 cut(s) | 576, 1627 |
| Eco24I | GRGCYC | 1 cut(s) | 1098 |
| Eco32I | GATATC | 1 cut(s) | 193 |
| Eco47I | GGWCC | 5 cut(s) | 325, 946, 1054, 1123, 1667 |
| Eco53kI | GAGCTC | 1 cut(s) | 1096 |
| Eco57I | CTGAAG | 1 cut(s) | 1155 |
| Eco88I | CYCGRG | 2 cut(s) | 21, 612 |
| Eco91I | GGTNACC | 1 cut(s) | 56 |
| EcoICRI | GAGCTC | 1 cut(s) | 1096 |
| EcoO65I | GGTNACC | 1 cut(s) | 56 |
| EcoRII | CCWGG | 4 cut(s) | 199, 1119, 1638, 2239 |
| EcoRV | GATATC | 1 cut(s) | 193 |
| EcoT14I | CCWWGG | 2 cut(s) | 576, 1627 |
| EcoT22I | ATGCAT | 2 cut(s) | 1650, 1708 |
| EcoT38I | GRGCYC | 1 cut(s) | 1098 |
| ErhI | CCWWGG | 2 cut(s) | 576, 1627 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1571, 1603 |
| FaqI | GGGAC | 1 cut(s) | 1391 |
| FauI | CCCGC | 1 cut(s) | 435 |
| FblI | GTMKAC | 3 cut(s) | 936, 1564, 1896 |
| Fnu4HI | GCNGC | 2 cut(s) | 18, 754 |
| FriOI | GRGCYC | 1 cut(s) | 1098 |
| Fsp4HI | GCNGC | 2 cut(s) | 18, 754 |
| GlaI | GCGC | 2 cut(s) | 6, 1038 |
| GluI | GCNGC | 2 cut(s) | 18, 754 |
| GsuI | CTGGAG | 1 cut(s) | 1197 |
| HaeII | RGCGCY | 1 cut(s) | 8 |
| HaeIII | GGCC | 4 cut(s) | 1119, 1807, 1956, 2239 |
| HapII | CCGG | 4 cut(s) | 220, 270, 990, 1336 |
| HgaI | GACGC | 2 cut(s) | 252, 1562 |
| HhaI | GCGC | 2 cut(s) | 7, 1039 |
| Hin1I | GRCGYC | 1 cut(s) | 1573 |
| Hin6I | GCGC | 2 cut(s) | 5, 1037 |
| HinP1I | GCGC | 2 cut(s) | 5, 1037 |
| HincII | GTYRAC | 1 cut(s) | 788 |
| HindII | GTYRAC | 1 cut(s) | 788 |
| HpaII | CCGG | 4 cut(s) | 220, 270, 990, 1336 |
| HphI | GGTGA | 7 cut(s) | 145, 559, 566, 1235, 1474, 1498, 2582 |
| Hpy188I | TCNGA | 9 cut(s) | 37, 86, 161, 325, 395, 773, 1503, 1543, 2317 |
| Hpy99I | CGWCG | 2 cut(s) | 173, 1578 |
| HpyCH4III | ACNGT | 6 cut(s) | 62, 1316, 1429, 1667, 1690, 1969 |
| HpyCH4IV | ACGT | 5 cut(s) | 233, 864, 1389, 1558, 1747 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 470, 479, 1036 |
| HpySE526I | ACGT | 5 cut(s) | 233, 864, 1389, 1558, 1747 |
| Hsp92I | GRCGYC | 1 cut(s) | 1573 |
| HspAI | GCGC | 2 cut(s) | 5, 1037 |
| Kpn2I | TCCGGA | 1 cut(s) | 269 |
| Kzo9I | GATC | 7 cut(s) | 297, 358, 475, 647, 976, 1498, 1929 |
| LguI | GCTCTTC | 2 cut(s) | 1200, 1539 |
| LmnI | GCTCC | 3 cut(s) | 750, 1093, 2430 |
| Lsp1109I | GCAGC | 2 cut(s) | 29, 765 |
| LweI | GCATC | 7 cut(s) | 399, 946, 1445, 1663, 1707, 2094, 2311 |
| MaeII | ACGT | 5 cut(s) | 233, 864, 1389, 1558, 1747 |
| MaeIII | GTNAC | 8 cut(s) | 56, 62, 410, 554, 636, 1045, 1139, 1880 |
| MalI | GATC | 7 cut(s) | 299, 360, 477, 649, 978, 1500, 1931 |
| MboI | GATC | 7 cut(s) | 297, 358, 475, 647, 976, 1498, 1929 |
| MfeI | CAATTG | 1 cut(s) | 705 |
| MflI | RGATCY | 1 cut(s) | 1929 |
| MhlI | GDGCHC | 2 cut(s) | 861, 1098 |
| MlsI | TGGCCA | 1 cut(s) | 1119 |
| MluI | ACGCGT | 1 cut(s) | 261 |
| MluNI | TGGCCA | 1 cut(s) | 1119 |
| MlyI | GAGTC | 3 cut(s) | 527, 624, 2484 |
| MmeI | TCCRAC | 3 cut(s) | 66, 615, 1071 |
| Mox20I | TGGCCA | 1 cut(s) | 1119 |
| Mph1103I | ATGCAT | 2 cut(s) | 1650, 1708 |
| MroI | TCCGGA | 1 cut(s) | 269 |
| MroXI | GAANNNNTTC | 3 cut(s) | 1343, 1527, 2004 |
| MscI | TGGCCA | 1 cut(s) | 1119 |
| MseI | TTAA | 5 cut(s) | 1100, 1790, 2291, 2339, 2519 |
| MslI | CAYNNNNRTG | 3 cut(s) | 271, 1950, 2120 |
| Msp20I | TGGCCA | 1 cut(s) | 1119 |
| MspCI | CTTAAG | 1 cut(s) | 1099 |
| MspI | CCGG | 4 cut(s) | 220, 270, 990, 1336 |
| MspR9I | CCNGG | 5 cut(s) | 201, 990, 1121, 1640, 2241 |
| MunI | CAATTG | 1 cut(s) | 705 |
| Mva1269I | GAATGC | 2 cut(s) | 1434, 1648 |
| MvaI | CCWGG | 4 cut(s) | 201, 1121, 1640, 2241 |
| MvnI | CGCG | 1 cut(s) | 263 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 470, 479, 1036 |
| NciI | CCSGG | 1 cut(s) | 990 |
| NdeII | GATC | 7 cut(s) | 297, 358, 475, 647, 976, 1498, 1929 |
| NlaIV | GGNNCC | 2 cut(s) | 278, 2426 |
| NmuCI | GTSAC | 2 cut(s) | 410, 554 |
| NsiI | ATGCAT | 2 cut(s) | 1650, 1708 |
| NspI | RCATGY | 6 cut(s) | 574, 1112, 1495, 1648, 2119, 2125 |
| NspV | TTCGAA | 1 cut(s) | 251 |
| PaeI | GCATGC | 3 cut(s) | 574, 1112, 2125 |
| PaeR7I | CTCGAG | 2 cut(s) | 21, 612 |
| PagI | TCATGA | 3 cut(s) | 294, 1287, 2038 |
| PciI | ACATGT | 1 cut(s) | 2115 |
| PciSI | GCTCTTC | 2 cut(s) | 1200, 1539 |
| PctI | GAATGC | 2 cut(s) | 1434, 1648 |
| PdmI | GAANNNNTTC | 3 cut(s) | 1343, 1527, 2004 |
| PfoI | TCCNGGA | 2 cut(s) | 988, 1638 |
| PkrI | GCNGC | 2 cut(s) | 19, 755 |
| PleI | GAGTC | 3 cut(s) | 526, 623, 2484 |
| PpsI | GAGTC | 3 cut(s) | 526, 623, 2484 |
| PscI | ACATGT | 1 cut(s) | 2115 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1892 |
| Psp124BI | GAGCTC | 1 cut(s) | 1098 |
| Psp6I | CCWGG | 4 cut(s) | 199, 1119, 1638, 2239 |
| PspEI | GGTNACC | 1 cut(s) | 56 |
| PspGI | CCWGG | 4 cut(s) | 199, 1119, 1638, 2239 |
| PspN4I | GGNNCC | 2 cut(s) | 278, 2426 |
| PspPI | GGNCC | 5 cut(s) | 325, 946, 1054, 1123, 1667 |
| PspXI | VCTCGAGB | 1 cut(s) | 21 |
| PsuI | RGATCY | 1 cut(s) | 1929 |
| RsaI | GTAC | 8 cut(s) | 515, 963, 1596, 1615, 1752, 2072, 2245, 2600 |
| RsaNI | GTAC | 8 cut(s) | 514, 962, 1595, 1614, 1751, 2071, 2244, 2599 |
| RseI | CAYNNNNRTG | 3 cut(s) | 271, 1950, 2120 |
| SacI | GAGCTC | 1 cut(s) | 1098 |
| SapI | GCTCTTC | 2 cut(s) | 1200, 1539 |
| SaqAI | TTAA | 5 cut(s) | 1100, 1790, 2291, 2339, 2519 |
| SatI | GCNGC | 2 cut(s) | 18, 754 |
| Sau3AI | GATC | 7 cut(s) | 297, 358, 475, 647, 976, 1498, 1929 |
| Sau96I | GGNCC | 5 cut(s) | 325, 946, 1054, 1123, 1667 |
| ScaI | AGTACT | 3 cut(s) | 963, 1596, 2600 |
| SchI | GAGTC | 3 cut(s) | 527, 624, 2484 |
| ScrFI | CCNGG | 5 cut(s) | 201, 990, 1121, 1640, 2241 |
| SduI | GDGCHC | 2 cut(s) | 861, 1098 |
| SfaNI | GCATC | 7 cut(s) | 399, 946, 1445, 1663, 1707, 2094, 2311 |
| SfcI | CTRYAG | 2 cut(s) | 206, 1782 |
| Sfr274I | CTCGAG | 2 cut(s) | 21, 612 |
| SfuI | TTCGAA | 1 cut(s) | 251 |
| SinI | GGWCC | 5 cut(s) | 325, 946, 1054, 1123, 1667 |
| SlaI | CTCGAG | 2 cut(s) | 21, 612 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 271, 1950, 2120 |
| SmlI | CTYRAG | 5 cut(s) | 21, 76, 176, 612, 1099 |
| SmoI | CTYRAG | 5 cut(s) | 21, 76, 176, 612, 1099 |
| SphI | GCATGC | 3 cut(s) | 574, 1112, 2125 |
| SsiI | CCGC | 2 cut(s) | 442, 1130 |
| SspI | AATATT | 1 cut(s) | 1151 |
| SstI | GAGCTC | 1 cut(s) | 1098 |
| StyD4I | CCNGG | 5 cut(s) | 199, 988, 1119, 1638, 2239 |
| StyI | CCWWGG | 2 cut(s) | 576, 1627 |
| TaaI | ACNGT | 6 cut(s) | 62, 1316, 1429, 1667, 1690, 1969 |
| TaiI | ACGT | 5 cut(s) | 236, 867, 1392, 1561, 1750 |
| TaqI | TCGA | 8 cut(s) | 22, 251, 357, 613, 2208, 2252, 2444, 2460 |
| TatI | WGTACW | 4 cut(s) | 961, 1594, 2070, 2598 |
| Tru1I | TTAA | 5 cut(s) | 1100, 1790, 2291, 2339, 2519 |
| Tru9I | TTAA | 5 cut(s) | 1100, 1790, 2291, 2339, 2519 |
| TscAI | CASTG | 1 cut(s) | 874 |
| TseFI | GTSAC | 2 cut(s) | 410, 554 |
| TseI | GCWGC | 2 cut(s) | 17, 753 |
| Tsp45I | GTSAC | 2 cut(s) | 410, 554 |
| TspGWI | ACGGA | 2 cut(s) | 982, 2417 |
| TspRI | CASTG | 1 cut(s) | 874 |
| Vha464I | CTTAAG | 1 cut(s) | 1099 |
| VneI | GTGCAC | 1 cut(s) | 857 |
| VpaK11BI | GGWCC | 5 cut(s) | 325, 946, 1054, 1123, 1667 |
| XapI | RAATTY | 4 cut(s) | 730, 1774, 1811, 1910 |
| XbaI | TCTAGA | 2 cut(s) | 905, 1993 |
| XceI | RCATGY | 6 cut(s) | 574, 1112, 1495, 1648, 2119, 2125 |
| XhoI | CTCGAG | 2 cut(s) | 21, 612 |
| XmiI | GTMKAC | 3 cut(s) | 936, 1564, 1896 |
| XmnI | GAANNNNTTC | 3 cut(s) | 1343, 1527, 2004 |
| ZrmI | AGTACT | 3 cut(s) | 963, 1596, 2600 |
| Zsp2I | ATGCAT | 2 cut(s) | 1650, 1708 |