DNA (cytosine-5)-methyltransferase
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 804 |
| AccIII | TCCGGA | 1 cut(s) | 130 |
| AciI | CCGC | 4 cut(s) | 378, 555, 771, 791 |
| AclWI | GGATC | 1 cut(s) | 216 |
| AcoI | YGGCCR | 1 cut(s) | 448 |
| AcsI | RAATTY | 1 cut(s) | 429 |
| AcuI | CTGAAG | 1 cut(s) | 204 |
| AfaI | GTAC | 2 cut(s) | 295, 341 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 747 |
| AflIII | ACRYGT | 3 cut(s) | 20, 67, 492 |
| AgsI | TTSAA | 7 cut(s) | 80, 119, 360, 435, 464, 505, 709 |
| AhlI | ACTAGT | 1 cut(s) | 196 |
| AluBI | AGCT | 5 cut(s) | 154, 237, 267, 422, 569 |
| AluI | AGCT | 5 cut(s) | 154, 237, 267, 422, 569 |
| Alw26I | GTCTC | 2 cut(s) | 302, 538 |
| AlwI | GGATC | 1 cut(s) | 216 |
| Aor13HI | TCCGGA | 1 cut(s) | 130 |
| AoxI | GGCC | 1 cut(s) | 448 |
| ApeKI | GCWGC | 3 cut(s) | 37, 154, 422 |
| ApoI | RAATTY | 1 cut(s) | 429 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 305, 337 |
| AspS9I | GGNCC | 1 cut(s) | 773 |
| AsuHPI | GGTGA | 1 cut(s) | 677 |
| AvaII | GGWCC | 1 cut(s) | 773 |
| BalI | TGGCCA | 1 cut(s) | 450 |
| BanI | GGYRCC | 1 cut(s) | 804 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 820, 852 |
| BbvI | GCAGC | 3 cut(s) | 24, 141, 409 |
| BccI | CCATC | 8 cut(s) | 78, 88, 224, 293, 440, 459, 809, 816 |
| BciVI | GTATCC | 1 cut(s) | 596 |
| BcoDI | GTCTC | 2 cut(s) | 302, 538 |
| BcuI | ACTAGT | 1 cut(s) | 196 |
| BfaI | CTAG | 3 cut(s) | 197, 242, 758 |
| BfmI | CTRYAG | 1 cut(s) | 262 |
| BfuI | GTATCC | 1 cut(s) | 596 |
| BisI | GCNGC | 3 cut(s) | 38, 155, 423 |
| BlsI | GCNGC | 3 cut(s) | 39, 156, 424 |
| Bme18I | GGWCC | 1 cut(s) | 773 |
| BmgT120I | GGNCC | 1 cut(s) | 773 |
| BmiI | GGNNCC | 1 cut(s) | 806 |
| BmsI | GCATC | 3 cut(s) | 42, 365, 534 |
| BpmI | CTGGAG | 1 cut(s) | 150 |
| Bpu10I | CCTNAGC | 1 cut(s) | 56 |
| BpuEI | CTTGAG | 2 cut(s) | 168, 842 |
| Bsa29I | ATCGAT | 2 cut(s) | 288, 511 |
| BsaBI | GATNNNNATC | 1 cut(s) | 450 |
| BsaJI | CCNNGG | 1 cut(s) | 324 |
| BsaWI | WCCGGW | 1 cut(s) | 130 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 747 |
| Bse118I | RCCGGY | 1 cut(s) | 576 |
| Bse8I | GATNNNNATC | 1 cut(s) | 450 |
| BseAI | TCCGGA | 1 cut(s) | 130 |
| BseCI | ATCGAT | 2 cut(s) | 288, 511 |
| BseDI | CCNNGG | 1 cut(s) | 324 |
| BseGI | GGATG | 3 cut(s) | 57, 89, 820 |
| BseJI | GATNNNNATC | 1 cut(s) | 450 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 747 |
| BseMII | CTCAG | 2 cut(s) | 70, 291 |
| BseRI | GAGGAG | 1 cut(s) | 153 |
| BseXI | GCAGC | 3 cut(s) | 24, 141, 409 |
| BsgI | GTGCAG | 1 cut(s) | 579 |
| BshFI | GGCC | 1 cut(s) | 450 |
| BshNI | GGYRCC | 1 cut(s) | 804 |
| BshVI | ATCGAT | 2 cut(s) | 288, 511 |
| BsiSI | CCGG | 2 cut(s) | 131, 577 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 747 |
| BsmAI | GTCTC | 2 cut(s) | 302, 538 |
| BsmI | GAATGC | 2 cut(s) | 157, 715 |
| BsnI | GGCC | 1 cut(s) | 450 |
| Bsp13I | TCCGGA | 1 cut(s) | 130 |
| Bsp1407I | TGTACA | 1 cut(s) | 293 |
| Bsp143I | GATC | 3 cut(s) | 208, 508, 754 |
| BspACI | CCGC | 4 cut(s) | 378, 555, 771, 791 |
| BspANI | GGCC | 1 cut(s) | 450 |
| BspCNI | CTCAG | 2 cut(s) | 69, 292 |
| BspDI | ATCGAT | 2 cut(s) | 288, 511 |
| BspEI | TCCGGA | 1 cut(s) | 130 |
| BspLI | GGNNCC | 1 cut(s) | 806 |
| BspPI | GGATC | 1 cut(s) | 216 |
| BspT107I | GGYRCC | 1 cut(s) | 804 |
| BsrFI | RCCGGY | 1 cut(s) | 576 |
| BsrGI | TGTACA | 1 cut(s) | 293 |
| BssAI | RCCGGY | 1 cut(s) | 576 |
| BssECI | CCNNGG | 1 cut(s) | 324 |
| BssMI | GATC | 3 cut(s) | 208, 508, 754 |
| Bst4CI | ACNGT | 3 cut(s) | 174, 248, 481 |
| Bst6I | CTCTTC | 5 cut(s) | 150, 218, 223, 459, 545 |
| BstAUI | TGTACA | 1 cut(s) | 293 |
| BstC8I | GCNNGC | 1 cut(s) | 29 |
| BstDEI | CTNAG | 3 cut(s) | 56, 300, 721 |
| BstEII | GGTNACC | 1 cut(s) | 280 |
| BstF5I | GGATG | 3 cut(s) | 57, 89, 820 |
| BstKTI | GATC | 3 cut(s) | 211, 511, 757 |
| BstMAI | GTCTC | 2 cut(s) | 302, 538 |
| BstMBI | GATC | 3 cut(s) | 208, 508, 754 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 37, 362, 566 |
| BstNSI | RCATGY | 4 cut(s) | 24, 31, 71, 496 |
| BstPI | GGTNACC | 1 cut(s) | 280 |
| BstSFI | CTRYAG | 1 cut(s) | 262 |
| BstV1I | GCAGC | 3 cut(s) | 24, 141, 409 |
| BstX2I | RGATCY | 1 cut(s) | 208 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 815 |
| BstYI | RGATCY | 1 cut(s) | 208 |
| Bsu15I | ATCGAT | 2 cut(s) | 288, 511 |
| BsuI | GTATCC | 1 cut(s) | 596 |
| BsuRI | GGCC | 1 cut(s) | 450 |
| BsuTUI | ATCGAT | 2 cut(s) | 288, 511 |
| BtsCI | GGATG | 3 cut(s) | 57, 89, 820 |
| BtsIMutI | CAGTG | 3 cut(s) | 179, 486, 615 |
| Cac8I | GCNNGC | 1 cut(s) | 29 |
| Cfr10I | RCCGGY | 1 cut(s) | 576 |
| Cfr13I | GGNCC | 1 cut(s) | 773 |
| ClaI | ATCGAT | 2 cut(s) | 288, 511 |
| Csp6I | GTAC | 2 cut(s) | 294, 340 |
| CviAII | CATG | 7 cut(s) | 21, 28, 41, 47, 68, 493, 777 |
| CviQI | GTAC | 2 cut(s) | 294, 340 |
| DdeI | CTNAG | 3 cut(s) | 56, 300, 721 |
| DpnI | GATC | 3 cut(s) | 210, 510, 756 |
| DpnII | GATC | 3 cut(s) | 208, 508, 754 |
| EaeI | YGGCCR | 1 cut(s) | 448 |
| Eam1104I | CTCTTC | 5 cut(s) | 150, 218, 223, 459, 545 |
| EarI | CTCTTC | 5 cut(s) | 150, 218, 223, 459, 545 |
| Eco47I | GGWCC | 1 cut(s) | 773 |
| Eco57I | CTGAAG | 1 cut(s) | 204 |
| Eco91I | GGTNACC | 1 cut(s) | 280 |
| EcoO65I | GGTNACC | 1 cut(s) | 280 |
| FaeI | CATG | 7 cut(s) | 24, 31, 44, 50, 71, 496, 780 |
| FatI | CATG | 7 cut(s) | 20, 27, 40, 46, 67, 492, 776 |
| FauI | CCCGC | 1 cut(s) | 784 |
| Fnu4HI | GCNGC | 3 cut(s) | 38, 155, 423 |
| FokI | GGATG | 3 cut(s) | 64, 96, 827 |
| Fsp4HI | GCNGC | 3 cut(s) | 38, 155, 423 |
| FspBI | CTAG | 3 cut(s) | 197, 242, 758 |
| GluI | GCNGC | 3 cut(s) | 38, 155, 423 |
| GsuI | CTGGAG | 1 cut(s) | 150 |
| HaeIII | GGCC | 1 cut(s) | 450 |
| HapII | CCGG | 2 cut(s) | 131, 577 |
| Hin1II | CATG | 7 cut(s) | 24, 31, 44, 50, 71, 496, 780 |
| HincII | GTYRAC | 1 cut(s) | 202 |
| HindII | GTYRAC | 1 cut(s) | 202 |
| HinfI | GANTC | 2 cut(s) | 386, 833 |
| HpaII | CCGG | 2 cut(s) | 131, 577 |
| HphI | GGTGA | 1 cut(s) | 677 |
| Hpy166II | GTNNAC | 1 cut(s) | 202 |
| Hpy188I | TCNGA | 4 cut(s) | 223, 271, 301, 622 |
| Hpy8I | GTNNAC | 1 cut(s) | 202 |
| HpyAV | CCTTC | 1 cut(s) | 74 |
| HpyCH4III | ACNGT | 3 cut(s) | 174, 248, 481 |
| HpyCH4V | TGCA | 4 cut(s) | 40, 157, 560, 700 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 37, 362, 566 |
| HpyF3I | CTNAG | 3 cut(s) | 56, 300, 721 |
| Hsp92II | CATG | 7 cut(s) | 24, 31, 44, 50, 71, 496, 780 |
| Kpn2I | TCCGGA | 1 cut(s) | 130 |
| Kzo9I | GATC | 3 cut(s) | 208, 508, 754 |
| LmnI | GCTCC | 4 cut(s) | 133, 234, 272, 655 |
| LpnPI | CCDG | 9 cut(s) | 43, 119, 144, 162, 180, 531, 590, 680, 787 |
| Lsp1109I | GCAGC | 3 cut(s) | 24, 141, 409 |
| LweI | GCATC | 3 cut(s) | 42, 365, 534 |
| MaeI | CTAG | 3 cut(s) | 197, 242, 758 |
| MaeIII | GTNAC | 3 cut(s) | 280, 390, 779 |
| MalI | GATC | 3 cut(s) | 210, 510, 756 |
| MboI | GATC | 3 cut(s) | 208, 508, 754 |
| MboII | GAAGA | 9 cut(s) | 137, 205, 210, 446, 455, 476, 532, 607, 828 |
| MfeI | CAATTG | 1 cut(s) | 898 |
| MflI | RGATCY | 1 cut(s) | 208 |
| MlsI | TGGCCA | 1 cut(s) | 450 |
| MluCI | AATT | 4 cut(s) | 6, 347, 429, 898 |
| MluNI | TGGCCA | 1 cut(s) | 450 |
| MlyI | GAGTC | 1 cut(s) | 380 |
| Mox20I | TGGCCA | 1 cut(s) | 450 |
| MroI | TCCGGA | 1 cut(s) | 130 |
| MscI | TGGCCA | 1 cut(s) | 450 |
| MseI | TTAA | 1 cut(s) | 330 |
| MslI | CAYNNNNRTG | 2 cut(s) | 45, 813 |
| Msp20I | TGGCCA | 1 cut(s) | 450 |
| MspA1I | CMGCKG | 1 cut(s) | 422 |
| MspI | CCGG | 2 cut(s) | 131, 577 |
| MunI | CAATTG | 1 cut(s) | 898 |
| Mva1269I | GAATGC | 2 cut(s) | 157, 715 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 37, 362, 566 |
| NdeII | GATC | 3 cut(s) | 208, 508, 754 |
| NlaIII | CATG | 7 cut(s) | 24, 31, 44, 50, 71, 496, 780 |
| NlaIV | GGNNCC | 1 cut(s) | 806 |
| NmuCI | GTSAC | 1 cut(s) | 390 |
| NspI | RCATGY | 4 cut(s) | 24, 31, 71, 496 |
| PaeI | GCATGC | 1 cut(s) | 31 |
| PciI | ACATGT | 3 cut(s) | 20, 67, 492 |
| PctI | GAATGC | 2 cut(s) | 157, 715 |
| PfeI | GAWTC | 1 cut(s) | 833 |
| PkrI | GCNGC | 3 cut(s) | 39, 156, 424 |
| PleI | GAGTC | 1 cut(s) | 380 |
| PpsI | GAGTC | 1 cut(s) | 380 |
| PscI | ACATGT | 3 cut(s) | 20, 67, 492 |
| PspEI | GGTNACC | 1 cut(s) | 280 |
| PspN4I | GGNNCC | 1 cut(s) | 806 |
| PspPI | GGNCC | 1 cut(s) | 773 |
| PsuI | RGATCY | 1 cut(s) | 208 |
| PvuII | CAGCTG | 1 cut(s) | 422 |
| RsaI | GTAC | 2 cut(s) | 295, 341 |
| RsaNI | GTAC | 2 cut(s) | 294, 340 |
| RseI | CAYNNNNRTG | 2 cut(s) | 45, 813 |
| SaqAI | TTAA | 1 cut(s) | 330 |
| SatI | GCNGC | 3 cut(s) | 38, 155, 423 |
| Sau3AI | GATC | 3 cut(s) | 208, 508, 754 |
| Sau96I | GGNCC | 1 cut(s) | 773 |
| SchI | GAGTC | 1 cut(s) | 380 |
| SfaNI | GCATC | 3 cut(s) | 42, 365, 534 |
| SfcI | CTRYAG | 1 cut(s) | 262 |
| SinI | GGWCC | 1 cut(s) | 773 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 45, 813 |
| SmlI | CTYRAG | 2 cut(s) | 183, 821 |
| SmoI | CTYRAG | 2 cut(s) | 183, 821 |
| SpeI | ACTAGT | 1 cut(s) | 196 |
| SphI | GCATGC | 1 cut(s) | 31 |
| Sse9I | AATT | 4 cut(s) | 6, 347, 429, 898 |
| SsiI | CCGC | 4 cut(s) | 378, 555, 771, 791 |
| SspI | AATATT | 1 cut(s) | 601 |
| SspMI | CTAG | 3 cut(s) | 197, 242, 758 |
| TaaI | ACNGT | 3 cut(s) | 174, 248, 481 |
| TaqI | TCGA | 2 cut(s) | 288, 511 |
| TasI | AATT | 4 cut(s) | 6, 347, 429, 898 |
| TatI | WGTACW | 1 cut(s) | 293 |
| TfiI | GAWTC | 1 cut(s) | 833 |
| Tru1I | TTAA | 1 cut(s) | 330 |
| Tru9I | TTAA | 1 cut(s) | 330 |
| TscAI | CASTG | 3 cut(s) | 179, 486, 615 |
| TseFI | GTSAC | 1 cut(s) | 390 |
| TseI | GCWGC | 3 cut(s) | 37, 154, 422 |
| Tsp45I | GTSAC | 1 cut(s) | 390 |
| TspDTI | ATGAA | 5 cut(s) | 17, 243, 360, 403, 608 |
| TspRI | CASTG | 3 cut(s) | 179, 486, 615 |
| VpaK11BI | GGWCC | 1 cut(s) | 773 |
| XapI | RAATTY | 1 cut(s) | 429 |
| XbaI | TCTAGA | 1 cut(s) | 241 |
| XceI | RCATGY | 4 cut(s) | 24, 31, 71, 496 |
| XspI | CTAG | 3 cut(s) | 197, 242, 758 |