TMV resistance protein N-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 313 |
| AccBSI | CCGCTC | 1 cut(s) | 359 |
| AccII | CGCG | 3 cut(s) | 1272, 1301, 1312 |
| AciI | CCGC | 7 cut(s) | 357, 975, 1165, 1262, 1270, 1294, 1301 |
| AclI | AACGTT | 1 cut(s) | 98 |
| AclWI | GGATC | 7 cut(s) | 574, 587, 635, 695, 1268, 1308, 1330 |
| AcsI | RAATTY | 2 cut(s) | 433, 1099 |
| AcuI | CTGAAG | 2 cut(s) | 309, 701 |
| AfaI | GTAC | 4 cut(s) | 173, 386, 925, 1305 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 482, 1300, 1410 |
| AflIII | ACRYGT | 2 cut(s) | 701, 1006 |
| AgsI | TTSAA | 9 cut(s) | 104, 181, 197, 430, 537, 592, 809, 1036, 1173 |
| AhlI | ACTAGT | 1 cut(s) | 157 |
| AjnI | CCWGG | 5 cut(s) | 309, 496, 837, 945, 1159 |
| AleI | CACNNNNGTG | 1 cut(s) | 75 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 477, 509 |
| AluBI | AGCT | 3 cut(s) | 223, 773, 1232 |
| AluI | AGCT | 3 cut(s) | 223, 773, 1232 |
| Alw26I | GTCTC | 2 cut(s) | 1083, 1350 |
| AlwI | GGATC | 7 cut(s) | 574, 587, 635, 695, 1268, 1308, 1330 |
| AoxI | GGCC | 2 cut(s) | 1162, 1415 |
| ApeKI | GCWGC | 2 cut(s) | 720, 1067 |
| ApoI | RAATTY | 2 cut(s) | 433, 1099 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 596 |
| AspLEI | GCGC | 1 cut(s) | 1353 |
| AspS9I | GGNCC | 2 cut(s) | 695, 980 |
| AsuC2I | CCSGG | 1 cut(s) | 957 |
| AsuHPI | GGTGA | 2 cut(s) | 961, 1276 |
| AvaII | GGWCC | 2 cut(s) | 695, 980 |
| BamHI | GGATCC | 1 cut(s) | 579 |
| BanI | GGYRCC | 1 cut(s) | 313 |
| BauI | CACGAG | 1 cut(s) | 1210 |
| BbvI | GCAGC | 2 cut(s) | 732, 1079 |
| BccI | CCATC | 1 cut(s) | 314 |
| BceAI | ACGGC | 1 cut(s) | 724 |
| BciT130I | CCWGG | 5 cut(s) | 311, 498, 839, 947, 1161 |
| BclI | TGATCA | 1 cut(s) | 216 |
| BcnI | CCSGG | 1 cut(s) | 957 |
| BcoDI | GTCTC | 2 cut(s) | 1083, 1350 |
| BcuI | ACTAGT | 1 cut(s) | 157 |
| BfaI | CTAG | 2 cut(s) | 158, 1397 |
| BfmI | CTRYAG | 1 cut(s) | 1105 |
| BglII | AGATCT | 1 cut(s) | 22 |
| BisI | GCNGC | 3 cut(s) | 721, 1068, 1165 |
| BlsI | GCNGC | 3 cut(s) | 722, 1069, 1166 |
| BmcAI | AGTACT | 1 cut(s) | 173 |
| Bme1390I | CCNGG | 6 cut(s) | 311, 498, 839, 947, 957, 1161 |
| Bme18I | GGWCC | 2 cut(s) | 695, 980 |
| BmgT120I | GGNCC | 2 cut(s) | 695, 980 |
| BmiI | GGNNCC | 2 cut(s) | 315, 581 |
| BmrFI | CCNGG | 6 cut(s) | 311, 498, 839, 947, 957, 1161 |
| BmsI | GCATC | 6 cut(s) | 255, 288, 942, 1230, 1362, 1373 |
| BpmI | CTGGAG | 2 cut(s) | 1218, 1314 |
| BpuMI | CCSGG | 1 cut(s) | 957 |
| Bsa29I | ATCGAT | 2 cut(s) | 107, 763 |
| BsaBI | GATNNNNATC | 3 cut(s) | 1278, 1312, 1318 |
| BsaI | GGTCTC | 1 cut(s) | 1083 |
| BsaJI | CCNNGG | 4 cut(s) | 84, 249, 497, 583 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 482, 1300, 1410 |
| Bse1I | ACTGG | 2 cut(s) | 179, 1138 |
| Bse3DI | GCAATG | 1 cut(s) | 1089 |
| Bse8I | GATNNNNATC | 3 cut(s) | 1278, 1312, 1318 |
| BseBI | CCWGG | 5 cut(s) | 311, 498, 839, 947, 1161 |
| BseCI | ATCGAT | 2 cut(s) | 107, 763 |
| BseDI | CCNNGG | 4 cut(s) | 84, 249, 497, 583 |
| BseGI | GGATG | 4 cut(s) | 70, 270, 306, 889 |
| BseJI | GATNNNNATC | 3 cut(s) | 1278, 1312, 1318 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 482, 1300, 1410 |
| BseMI | GCAATG | 1 cut(s) | 1089 |
| BseMII | CTCAG | 2 cut(s) | 420, 1361 |
| BseNI | ACTGG | 2 cut(s) | 179, 1138 |
| BseXI | GCAGC | 2 cut(s) | 732, 1079 |
| BseYI | CCCAGC | 2 cut(s) | 1191, 1221 |
| BsgI | GTGCAG | 3 cut(s) | 37, 540, 1086 |
| Bsh1236I | CGCG | 3 cut(s) | 1272, 1301, 1312 |
| Bsh1285I | CGRYCG | 2 cut(s) | 1282, 1310 |
| BshFI | GGCC | 2 cut(s) | 1164, 1417 |
| BshNI | GGYRCC | 1 cut(s) | 313 |
| BshVI | ATCGAT | 2 cut(s) | 107, 763 |
| BsiEI | CGRYCG | 2 cut(s) | 1282, 1310 |
| BsiSI | CCGG | 2 cut(s) | 956, 1244 |
| BslFI | GGGAC | 2 cut(s) | 136, 453 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 482, 1300, 1410 |
| BsmAI | GTCTC | 2 cut(s) | 1083, 1350 |
| BsmFI | GGGAC | 2 cut(s) | 136, 453 |
| BsmI | GAATGC | 1 cut(s) | 711 |
| BsnI | GGCC | 2 cut(s) | 1164, 1417 |
| Bso31I | GGTCTC | 1 cut(s) | 1083 |
| Bsp1407I | TGTACA | 1 cut(s) | 923 |
| Bsp19I | CCATGG | 1 cut(s) | 249 |
| Bsp68I | TCGCGA | 1 cut(s) | 1312 |
| BspACI | CCGC | 7 cut(s) | 357, 975, 1165, 1262, 1270, 1294, 1301 |
| BspANI | GGCC | 2 cut(s) | 1164, 1417 |
| BspCNI | CTCAG | 2 cut(s) | 419, 1360 |
| BspDI | ATCGAT | 2 cut(s) | 107, 763 |
| BspFNI | CGCG | 3 cut(s) | 1272, 1301, 1312 |
| BspLI | GGNNCC | 2 cut(s) | 315, 581 |
| BspMAI | CTGCAG | 1 cut(s) | 1109 |
| BspPI | GGATC | 7 cut(s) | 574, 587, 635, 695, 1268, 1308, 1330 |
| BspT107I | GGYRCC | 1 cut(s) | 313 |
| BspTNI | GGTCTC | 1 cut(s) | 1083 |
| BsrBI | CCGCTC | 1 cut(s) | 359 |
| BsrDI | GCAATG | 1 cut(s) | 1089 |
| BsrGI | TGTACA | 1 cut(s) | 923 |
| BsrI | ACTGG | 2 cut(s) | 179, 1138 |
| BssECI | CCNNGG | 4 cut(s) | 84, 249, 497, 583 |
| BssSI | CACGAG | 1 cut(s) | 1210 |
| BssT1I | CCWWGG | 2 cut(s) | 84, 249 |
| Bst2BI | CACGAG | 1 cut(s) | 1210 |
| Bst2UI | CCWGG | 5 cut(s) | 311, 498, 839, 947, 1161 |
| Bst4CI | ACNGT | 6 cut(s) | 399, 444, 550, 790, 796, 1002 |
| BstAUI | TGTACA | 1 cut(s) | 923 |
| BstC8I | GCNNGC | 2 cut(s) | 555, 775 |
| BstDEI | CTNAG | 2 cut(s) | 406, 1347 |
| BstDSI | CCRYGG | 1 cut(s) | 249 |
| BstEII | GGTNACC | 2 cut(s) | 42, 1264 |
| BstF5I | GGATG | 4 cut(s) | 70, 270, 306, 889 |
| BstFNI | CGCG | 3 cut(s) | 1272, 1301, 1312 |
| BstHHI | GCGC | 1 cut(s) | 1353 |
| BstMAI | GTCTC | 2 cut(s) | 1083, 1350 |
| BstMCI | CGRYCG | 2 cut(s) | 1282, 1310 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 717, 1161, 1249, 1392 |
| BstNI | CCWGG | 5 cut(s) | 311, 498, 839, 947, 1161 |
| BstNSI | RCATGY | 2 cut(s) | 705, 1010 |
| BstPI | GGTNACC | 2 cut(s) | 42, 1264 |
| BstSCI | CCNGG | 6 cut(s) | 309, 496, 837, 945, 955, 1159 |
| BstSFI | CTRYAG | 1 cut(s) | 1105 |
| BstUI | CGCG | 3 cut(s) | 1272, 1301, 1312 |
| BstV1I | GCAGC | 2 cut(s) | 732, 1079 |
| BstX2I | RGATCY | 3 cut(s) | 22, 579, 687 |
| BstYI | RGATCY | 3 cut(s) | 22, 579, 687 |
| Bsu15I | ATCGAT | 2 cut(s) | 107, 763 |
| BsuRI | GGCC | 2 cut(s) | 1164, 1417 |
| BsuTUI | ATCGAT | 2 cut(s) | 107, 763 |
| BtgI | CCRYGG | 1 cut(s) | 249 |
| BtgZI | GCGATG | 1 cut(s) | 792 |
| BtsCI | GGATG | 4 cut(s) | 70, 270, 306, 889 |
| BtsIMutI | CAGTG | 1 cut(s) | 1373 |
| BtuMI | TCGCGA | 1 cut(s) | 1312 |
| Cac8I | GCNNGC | 2 cut(s) | 555, 775 |
| CfoI | GCGC | 1 cut(s) | 1353 |
| Cfr13I | GGNCC | 2 cut(s) | 695, 980 |
| ClaI | ATCGAT | 2 cut(s) | 107, 763 |
| CsiI | ACCWGGT | 1 cut(s) | 945 |
| Csp6I | GTAC | 4 cut(s) | 172, 385, 924, 1304 |
| CviAII | CATG | 5 cut(s) | 250, 702, 848, 1007, 1419 |
| CviQI | GTAC | 4 cut(s) | 172, 385, 924, 1304 |
| DdeI | CTNAG | 2 cut(s) | 406, 1347 |
| Eco130I | CCWWGG | 2 cut(s) | 84, 249 |
| Eco31I | GGTCTC | 1 cut(s) | 1083 |
| Eco32I | GATATC | 1 cut(s) | 111 |
| Eco47I | GGWCC | 2 cut(s) | 695, 980 |
| Eco57I | CTGAAG | 2 cut(s) | 309, 701 |
| Eco91I | GGTNACC | 2 cut(s) | 42, 1264 |
| EcoO65I | GGTNACC | 2 cut(s) | 42, 1264 |
| EcoRII | CCWGG | 5 cut(s) | 309, 496, 837, 945, 1159 |
| EcoRV | GATATC | 1 cut(s) | 111 |
| EcoT14I | CCWWGG | 2 cut(s) | 84, 249 |
| ErhI | CCWWGG | 2 cut(s) | 84, 249 |
| FaeI | CATG | 5 cut(s) | 253, 705, 851, 1010, 1422 |
| FaqI | GGGAC | 2 cut(s) | 136, 453 |
| FatI | CATG | 5 cut(s) | 249, 701, 847, 1006, 1418 |
| FauI | CCCGC | 3 cut(s) | 364, 1277, 1301 |
| FbaI | TGATCA | 1 cut(s) | 216 |
| Fnu4HI | GCNGC | 3 cut(s) | 721, 1068, 1165 |
| FokI | GGATG | 4 cut(s) | 77, 277, 293, 876 |
| Fsp4HI | GCNGC | 3 cut(s) | 721, 1068, 1165 |
| FspBI | CTAG | 2 cut(s) | 158, 1397 |
| GlaI | GCGC | 1 cut(s) | 1352 |
| GluI | GCNGC | 3 cut(s) | 721, 1068, 1165 |
| GsaI | CCCAGC | 2 cut(s) | 1195, 1225 |
| GsuI | CTGGAG | 2 cut(s) | 1218, 1314 |
| HaeIII | GGCC | 2 cut(s) | 1164, 1417 |
| HapII | CCGG | 2 cut(s) | 956, 1244 |
| HhaI | GCGC | 1 cut(s) | 1353 |
| Hin1II | CATG | 5 cut(s) | 253, 705, 851, 1010, 1422 |
| Hin6I | GCGC | 1 cut(s) | 1351 |
| HinP1I | GCGC | 1 cut(s) | 1351 |
| HindIII | AAGCTT | 1 cut(s) | 221 |
| HinfI | GANTC | 8 cut(s) | 80, 125, 245, 657, 1052, 1247, 1378, 1400 |
| HpaII | CCGG | 2 cut(s) | 956, 1244 |
| HphI | GGTGA | 2 cut(s) | 961, 1276 |
| Hpy166II | GTNNAC | 3 cut(s) | 70, 387, 980 |
| Hpy188I | TCNGA | 6 cut(s) | 409, 584, 681, 937, 1057, 1113 |
| Hpy188III | TCNNGA | 7 cut(s) | 817, 893, 1235, 1277, 1311, 1317, 1389 |
| Hpy8I | GTNNAC | 3 cut(s) | 70, 387, 980 |
| Hpy99I | CGWCG | 1 cut(s) | 494 |
| HpyAV | CCTTC | 4 cut(s) | 362, 851, 1172, 1176 |
| HpyCH4III | ACNGT | 6 cut(s) | 399, 444, 550, 790, 796, 1002 |
| HpyCH4IV | ACGT | 4 cut(s) | 98, 492, 532, 906 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 717, 1161, 1249, 1392 |
| HpyF3I | CTNAG | 2 cut(s) | 406, 1347 |
| HpySE526I | ACGT | 4 cut(s) | 98, 492, 532, 906 |
| Hsp92II | CATG | 5 cut(s) | 253, 705, 851, 1010, 1422 |
| HspAI | GCGC | 1 cut(s) | 1351 |
| Ksp22I | TGATCA | 1 cut(s) | 216 |
| LmnI | GCTCC | 2 cut(s) | 364, 1237 |
| Lsp1109I | GCAGC | 2 cut(s) | 732, 1079 |
| LweI | GCATC | 6 cut(s) | 255, 288, 942, 1230, 1362, 1373 |
| MabI | ACCWGGT | 1 cut(s) | 945 |
| MaeI | CTAG | 2 cut(s) | 158, 1397 |
| MaeII | ACGT | 4 cut(s) | 98, 492, 532, 906 |
| MbiI | CCGCTC | 1 cut(s) | 359 |
| MboII | GAAGA | 2 cut(s) | 464, 589 |
| MflI | RGATCY | 3 cut(s) | 22, 579, 687 |
| MluCI | AATT | 5 cut(s) | 433, 651, 938, 1099, 1200 |
| MlyI | GAGTC | 3 cut(s) | 134, 666, 1372 |
| MmeI | TCCRAC | 1 cut(s) | 1091 |
| MroXI | GAANNNNTTC | 1 cut(s) | 596 |
| MseI | TTAA | 3 cut(s) | 740, 1203, 1217 |
| MslI | CAYNNNNRTG | 4 cut(s) | 75, 263, 311, 894 |
| MspI | CCGG | 2 cut(s) | 956, 1244 |
| MspR9I | CCNGG | 6 cut(s) | 311, 498, 839, 947, 957, 1161 |
| Mva1269I | GAATGC | 1 cut(s) | 711 |
| MvaI | CCWGG | 5 cut(s) | 311, 498, 839, 947, 1161 |
| MvnI | CGCG | 3 cut(s) | 1272, 1301, 1312 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 717, 1161, 1249, 1392 |
| NciI | CCSGG | 1 cut(s) | 957 |
| NcoI | CCATGG | 1 cut(s) | 249 |
| NlaIII | CATG | 5 cut(s) | 253, 705, 851, 1010, 1422 |
| NlaIV | GGNNCC | 2 cut(s) | 315, 581 |
| NmuCI | GTSAC | 3 cut(s) | 1002, 1264, 1371 |
| NruI | TCGCGA | 1 cut(s) | 1312 |
| NspI | RCATGY | 2 cut(s) | 705, 1010 |
| OliI | CACNNNNGTG | 1 cut(s) | 75 |
| PciI | ACATGT | 2 cut(s) | 701, 1006 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 104, 1387 |
| PctI | GAATGC | 1 cut(s) | 711 |
| PdmI | GAANNNNTTC | 1 cut(s) | 596 |
| PfeI | GAWTC | 5 cut(s) | 80, 245, 1052, 1247, 1400 |
| PkrI | GCNGC | 3 cut(s) | 722, 1069, 1166 |
| Ple19I | CGATCG | 2 cut(s) | 1282, 1310 |
| PleI | GAGTC | 3 cut(s) | 133, 665, 1372 |
| PpsI | GAGTC | 3 cut(s) | 133, 665, 1372 |
| PscI | ACATGT | 2 cut(s) | 701, 1006 |
| Psp1406I | AACGTT | 1 cut(s) | 98 |
| Psp6I | CCWGG | 5 cut(s) | 309, 496, 837, 945, 1159 |
| PspEI | GGTNACC | 2 cut(s) | 42, 1264 |
| PspFI | CCCAGC | 2 cut(s) | 1191, 1221 |
| PspGI | CCWGG | 5 cut(s) | 309, 496, 837, 945, 1159 |
| PspN4I | GGNNCC | 2 cut(s) | 315, 581 |
| PspPI | GGNCC | 2 cut(s) | 695, 980 |
| PstI | CTGCAG | 1 cut(s) | 1109 |
| PsuI | RGATCY | 3 cut(s) | 22, 579, 687 |
| PvuI | CGATCG | 2 cut(s) | 1282, 1310 |
| RruI | TCGCGA | 1 cut(s) | 1312 |
| RsaI | GTAC | 4 cut(s) | 173, 386, 925, 1305 |
| RsaNI | GTAC | 4 cut(s) | 172, 385, 924, 1304 |
| RseI | CAYNNNNRTG | 4 cut(s) | 75, 263, 311, 894 |
| SaqAI | TTAA | 3 cut(s) | 740, 1203, 1217 |
| SatI | GCNGC | 3 cut(s) | 721, 1068, 1165 |
| Sau96I | GGNCC | 2 cut(s) | 695, 980 |
| ScaI | AGTACT | 1 cut(s) | 173 |
| SchI | GAGTC | 3 cut(s) | 134, 666, 1372 |
| ScrFI | CCNGG | 6 cut(s) | 311, 498, 839, 947, 957, 1161 |
| SexAI | ACCWGGT | 1 cut(s) | 945 |
| SfaNI | GCATC | 6 cut(s) | 255, 288, 942, 1230, 1362, 1373 |
| SfcI | CTRYAG | 1 cut(s) | 1105 |
| SinI | GGWCC | 2 cut(s) | 695, 980 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 75, 263, 311, 894 |
| SpeI | ACTAGT | 1 cut(s) | 157 |
| Sse9I | AATT | 5 cut(s) | 433, 651, 938, 1099, 1200 |
| SsiI | CCGC | 7 cut(s) | 357, 975, 1165, 1262, 1270, 1294, 1301 |
| SspMI | CTAG | 2 cut(s) | 158, 1397 |
| StyD4I | CCNGG | 6 cut(s) | 309, 496, 837, 945, 955, 1159 |
| StyI | CCWWGG | 2 cut(s) | 84, 249 |
| TaaI | ACNGT | 6 cut(s) | 399, 444, 550, 790, 796, 1002 |
| TaiI | ACGT | 4 cut(s) | 101, 495, 535, 909 |
| TaqI | TCGA | 4 cut(s) | 107, 763, 1381, 1390 |
| TaqII | GACCGA | 2 cut(s) | 1107, 1359 |
| TasI | AATT | 5 cut(s) | 433, 651, 938, 1099, 1200 |
| TatI | WGTACW | 2 cut(s) | 171, 923 |
| TauI | GCSGC | 1 cut(s) | 1167 |
| TfiI | GAWTC | 5 cut(s) | 80, 245, 1052, 1247, 1400 |
| Tru1I | TTAA | 3 cut(s) | 740, 1203, 1217 |
| Tru9I | TTAA | 3 cut(s) | 740, 1203, 1217 |
| TscAI | CASTG | 1 cut(s) | 1380 |
| TseFI | GTSAC | 3 cut(s) | 1002, 1264, 1371 |
| TseI | GCWGC | 2 cut(s) | 720, 1067 |
| Tsp45I | GTSAC | 3 cut(s) | 1002, 1264, 1371 |
| TspDTI | ATGAA | 3 cut(s) | 462, 795, 1074 |
| TspRI | CASTG | 1 cut(s) | 1380 |
| VpaK11BI | GGWCC | 2 cut(s) | 695, 980 |
| XapI | RAATTY | 2 cut(s) | 433, 1099 |
| XceI | RCATGY | 2 cut(s) | 705, 1010 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 199 |
| XmnI | GAANNNNTTC | 1 cut(s) | 596 |
| XspI | CTAG | 2 cut(s) | 158, 1397 |
| ZrmI | AGTACT | 1 cut(s) | 173 |