TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| COX15-CtaA | PF02628 | 93 - 423 | 6.4e-113 | Cytochrome oxidase assembly protein |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 942 |
| AarI | CACCTGC | 1 cut(s) | 820 |
| Acc36I | ACCTGC | 1 cut(s) | 820 |
| AccB1I | GGYRCC | 1 cut(s) | 1223 |
| AccIII | TCCGGA | 1 cut(s) | 1008 |
| AciI | CCGC | 4 cut(s) | 100, 294, 392, 1227 |
| AclWI | GGATC | 4 cut(s) | 896, 967, 980, 1261 |
| AcsI | RAATTY | 2 cut(s) | 374, 491 |
| AcuI | CTGAAG | 2 cut(s) | 732, 1154 |
| AdeI | CACNNNGTG | 1 cut(s) | 1285 |
| AfaI | GTAC | 2 cut(s) | 171, 434 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 300, 959, 960 |
| AgsI | TTSAA | 5 cut(s) | 232, 360, 482, 490, 1080 |
| AjnI | CCWGG | 1 cut(s) | 827 |
| AluBI | AGCT | 5 cut(s) | 141, 737, 876, 1042, 1238 |
| AluI | AGCT | 5 cut(s) | 141, 737, 876, 1042, 1238 |
| Alw21I | GWGCWC | 1 cut(s) | 262 |
| Alw26I | GTCTC | 2 cut(s) | 604, 850 |
| AlwI | GGATC | 4 cut(s) | 896, 967, 980, 1261 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 695 |
| Aor13HI | TCCGGA | 1 cut(s) | 1008 |
| AoxI | GGCC | 2 cut(s) | 769, 1165 |
| ApeKI | GCWGC | 4 cut(s) | 296, 734, 842, 1039 |
| ApoI | RAATTY | 2 cut(s) | 374, 491 |
| AspLEI | GCGC | 1 cut(s) | 1219 |
| AspS9I | GGNCC | 1 cut(s) | 251 |
| AsuC2I | CCSGG | 2 cut(s) | 919, 1124 |
| AsuHPI | GGTGA | 3 cut(s) | 328, 731, 1290 |
| AvaII | GGWCC | 1 cut(s) | 251 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1036, 1069 |
| BamHI | GGATCC | 1 cut(s) | 972 |
| BanI | GGYRCC | 1 cut(s) | 1223 |
| BanII | GRGCYC | 1 cut(s) | 120 |
| BauI | CACGAG | 1 cut(s) | 255 |
| BbsI | GAAGAC | 2 cut(s) | 414, 489 |
| Bbv12I | GWGCWC | 1 cut(s) | 262 |
| BbvI | GCAGC | 4 cut(s) | 283, 746, 829, 1051 |
| BccI | CCATC | 9 cut(s) | 154, 181, 499, 658, 952, 963, 1056, 1303, 1309 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1116, 1150 |
| BciT130I | CCWGG | 1 cut(s) | 829 |
| BciVI | GTATCC | 1 cut(s) | 1064 |
| BcnI | CCSGG | 2 cut(s) | 919, 1124 |
| BcoDI | GTCTC | 2 cut(s) | 604, 850 |
| BfaI | CTAG | 1 cut(s) | 72 |
| BfmI | CTRYAG | 2 cut(s) | 204, 822 |
| BfuAI | ACCTGC | 1 cut(s) | 820 |
| BfuI | GTATCC | 1 cut(s) | 1064 |
| BisI | GCNGC | 4 cut(s) | 297, 735, 843, 1040 |
| BlpI | GCTNAGC | 1 cut(s) | 705 |
| BlsI | GCNGC | 4 cut(s) | 298, 736, 844, 1041 |
| Bme1390I | CCNGG | 3 cut(s) | 829, 919, 1124 |
| Bme18I | GGWCC | 1 cut(s) | 251 |
| BmgT120I | GGNCC | 1 cut(s) | 251 |
| BmiI | GGNNCC | 5 cut(s) | 11, 292, 687, 974, 1225 |
| BmrFI | CCNGG | 3 cut(s) | 829, 919, 1124 |
| BmrI | ACTGGG | 3 cut(s) | 123, 390, 1190 |
| BmsI | GCATC | 4 cut(s) | 77, 219, 701, 916 |
| BmuI | ACTGGG | 3 cut(s) | 123, 390, 1190 |
| BpiI | GAAGAC | 2 cut(s) | 414, 489 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 847, 879 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 705 |
| BpuEI | CTTGAG | 1 cut(s) | 1308 |
| BpuMI | CCSGG | 2 cut(s) | 919, 1124 |
| BsaJI | CCNNGG | 3 cut(s) | 156, 631, 828 |
| BsaWI | WCCGGW | 1 cut(s) | 1008 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 897, 927 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 300, 959, 960 |
| Bse1I | ACTGG | 7 cut(s) | 118, 385, 416, 506, 787, 885, 1185 |
| BseAI | TCCGGA | 1 cut(s) | 1008 |
| BseBI | CCWGG | 1 cut(s) | 829 |
| BseDI | CCNNGG | 3 cut(s) | 156, 631, 828 |
| BseGI | GGATG | 5 cut(s) | 477, 510, 669, 988, 1301 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 300, 959, 960 |
| BseMII | CTCAG | 5 cut(s) | 275, 599, 687, 719, 915 |
| BseNI | ACTGG | 7 cut(s) | 118, 385, 416, 506, 787, 885, 1185 |
| BseRI | GAGGAG | 2 cut(s) | 101, 698 |
| BseXI | GCAGC | 4 cut(s) | 283, 746, 829, 1051 |
| BseYI | CCCAGC | 2 cut(s) | 638, 1238 |
| BsgI | GTGCAG | 1 cut(s) | 1058 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1136 |
| BshFI | GGCC | 2 cut(s) | 771, 1167 |
| BshNI | GGYRCC | 1 cut(s) | 1223 |
| BsiEI | CGRYCG | 1 cut(s) | 1136 |
| BsiHKAI | GWGCWC | 1 cut(s) | 262 |
| BsiSI | CCGG | 3 cut(s) | 918, 1009, 1124 |
| BslFI | GGGAC | 1 cut(s) | 977 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 300, 959, 960 |
| BsmAI | GTCTC | 2 cut(s) | 604, 850 |
| BsmFI | GGGAC | 1 cut(s) | 977 |
| BsnI | GGCC | 2 cut(s) | 771, 1167 |
| Bsp1286I | GDGCHC | 2 cut(s) | 120, 262 |
| Bsp13I | TCCGGA | 1 cut(s) | 1008 |
| Bsp143I | GATC | 5 cut(s) | 347, 888, 972, 1133, 1266 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 705 |
| BspACI | CCGC | 4 cut(s) | 100, 294, 392, 1227 |
| BspANI | GGCC | 2 cut(s) | 771, 1167 |
| BspCNI | CTCAG | 5 cut(s) | 274, 600, 688, 718, 914 |
| BspEI | TCCGGA | 1 cut(s) | 1008 |
| BspLI | GGNNCC | 5 cut(s) | 11, 292, 687, 974, 1225 |
| BspMI | ACCTGC | 1 cut(s) | 820 |
| BspPI | GGATC | 4 cut(s) | 896, 967, 980, 1261 |
| BspQI | GCTCTTC | 1 cut(s) | 870 |
| BspT107I | GGYRCC | 1 cut(s) | 1223 |
| BsrI | ACTGG | 7 cut(s) | 118, 385, 416, 506, 787, 885, 1185 |
| BssECI | CCNNGG | 3 cut(s) | 156, 631, 828 |
| BssMI | GATC | 5 cut(s) | 347, 888, 972, 1133, 1266 |
| BssSI | CACGAG | 1 cut(s) | 255 |
| BssT1I | CCWWGG | 2 cut(s) | 156, 631 |
| Bst2BI | CACGAG | 1 cut(s) | 255 |
| Bst2UI | CCWGG | 1 cut(s) | 829 |
| Bst4CI | ACNGT | 4 cut(s) | 196, 767, 1036, 1153 |
| Bst6I | CTCTTC | 4 cut(s) | 627, 848, 870, 1259 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 914 |
| BstC8I | GCNNGC | 3 cut(s) | 134, 690, 1165 |
| BstDEI | CTNAG | 5 cut(s) | 261, 608, 696, 705, 901 |
| BstF5I | GGATG | 5 cut(s) | 477, 510, 669, 988, 1301 |
| BstHHI | GCGC | 1 cut(s) | 1219 |
| BstKTI | GATC | 5 cut(s) | 350, 891, 975, 1136, 1269 |
| BstMAI | GTCTC | 2 cut(s) | 604, 850 |
| BstMBI | GATC | 5 cut(s) | 347, 888, 972, 1133, 1266 |
| BstMCI | CGRYCG | 1 cut(s) | 1136 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 138, 635, 914, 935, 1164, 1216, 1235 |
| BstNI | CCWGG | 1 cut(s) | 829 |
| BstNSI | RCATGY | 1 cut(s) | 938 |
| BstSCI | CCNGG | 3 cut(s) | 827, 917, 1122 |
| BstSFI | CTRYAG | 2 cut(s) | 204, 822 |
| BstV1I | GCAGC | 4 cut(s) | 283, 746, 829, 1051 |
| BstV2I | GAAGAC | 2 cut(s) | 414, 489 |
| BstX2I | RGATCY | 1 cut(s) | 972 |
| BstYI | RGATCY | 1 cut(s) | 972 |
| BsuI | GTATCC | 1 cut(s) | 1064 |
| BsuRI | GGCC | 2 cut(s) | 771, 1167 |
| BtsCI | GGATG | 5 cut(s) | 477, 510, 669, 988, 1301 |
| BtsI | GCAGTG | 1 cut(s) | 891 |
| BtsIMutI | CAGTG | 3 cut(s) | 192, 891, 1178 |
| BveI | ACCTGC | 1 cut(s) | 820 |
| Cac8I | GCNNGC | 3 cut(s) | 134, 690, 1165 |
| CaiI | CAGNNNCTG | 1 cut(s) | 695 |
| CfoI | GCGC | 1 cut(s) | 1219 |
| Cfr13I | GGNCC | 1 cut(s) | 251 |
| Csp6I | GTAC | 2 cut(s) | 170, 433 |
| CviAII | CATG | 7 cut(s) | 300, 313, 799, 836, 935, 994, 1159 |
| CviQI | GTAC | 2 cut(s) | 170, 433 |
| DdeI | CTNAG | 5 cut(s) | 261, 608, 696, 705, 901 |
| DpnI | GATC | 5 cut(s) | 349, 890, 974, 1135, 1268 |
| DpnII | GATC | 5 cut(s) | 347, 888, 972, 1133, 1266 |
| DraIII | CACNNNGTG | 1 cut(s) | 1285 |
| Eam1104I | CTCTTC | 4 cut(s) | 627, 848, 870, 1259 |
| EarI | CTCTTC | 4 cut(s) | 627, 848, 870, 1259 |
| EciI | GGCGGA | 1 cut(s) | 381 |
| Eco130I | CCWWGG | 2 cut(s) | 156, 631 |
| Eco24I | GRGCYC | 1 cut(s) | 120 |
| Eco32I | GATATC | 1 cut(s) | 1188 |
| Eco47I | GGWCC | 1 cut(s) | 251 |
| Eco57I | CTGAAG | 2 cut(s) | 732, 1154 |
| EcoO109I | RGGNCCY | 1 cut(s) | 251 |
| EcoRII | CCWGG | 1 cut(s) | 827 |
| EcoRV | GATATC | 1 cut(s) | 1188 |
| EcoT14I | CCWWGG | 2 cut(s) | 156, 631 |
| EcoT38I | GRGCYC | 1 cut(s) | 120 |
| ErhI | CCWWGG | 2 cut(s) | 156, 631 |
| FaeI | CATG | 7 cut(s) | 303, 316, 802, 839, 938, 997, 1162 |
| FaqI | GGGAC | 1 cut(s) | 977 |
| FatI | CATG | 7 cut(s) | 299, 312, 798, 835, 934, 993, 1158 |
| Fnu4HI | GCNGC | 4 cut(s) | 297, 735, 843, 1040 |
| FokI | GGATG | 5 cut(s) | 484, 517, 676, 995, 1288 |
| FriOI | GRGCYC | 1 cut(s) | 120 |
| Fsp4HI | GCNGC | 4 cut(s) | 297, 735, 843, 1040 |
| FspBI | CTAG | 1 cut(s) | 72 |
| GlaI | GCGC | 1 cut(s) | 1218 |
| GluI | GCNGC | 4 cut(s) | 297, 735, 843, 1040 |
| GsaI | CCCAGC | 2 cut(s) | 642, 1242 |
| HaeIII | GGCC | 2 cut(s) | 771, 1167 |
| HapII | CCGG | 3 cut(s) | 918, 1009, 1124 |
| HhaI | GCGC | 1 cut(s) | 1219 |
| Hin1II | CATG | 7 cut(s) | 303, 316, 802, 839, 938, 997, 1162 |
| Hin6I | GCGC | 1 cut(s) | 1217 |
| HinP1I | GCGC | 1 cut(s) | 1217 |
| HincII | GTYRAC | 1 cut(s) | 1101 |
| HindII | GTYRAC | 1 cut(s) | 1101 |
| HindIII | AAGCTT | 1 cut(s) | 874 |
| HinfI | GANTC | 2 cut(s) | 818, 1249 |
| HpaII | CCGG | 3 cut(s) | 918, 1009, 1124 |
| HphI | GGTGA | 3 cut(s) | 328, 731, 1290 |
| Hpy166II | GTNNAC | 4 cut(s) | 192, 244, 780, 1101 |
| Hpy188I | TCNGA | 4 cut(s) | 9, 264, 403, 697 |
| Hpy188III | TCNNGA | 2 cut(s) | 903, 1009 |
| Hpy8I | GTNNAC | 4 cut(s) | 192, 244, 780, 1101 |
| HpyAV | CCTTC | 4 cut(s) | 525, 1178, 1280, 1316 |
| HpyCH4III | ACNGT | 4 cut(s) | 196, 767, 1036, 1153 |
| HpyCH4V | TGCA | 6 cut(s) | 136, 299, 845, 1039, 1061, 1067 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 138, 635, 914, 935, 1164, 1216, 1235 |
| HpyF3I | CTNAG | 5 cut(s) | 261, 608, 696, 705, 901 |
| Hsp92II | CATG | 7 cut(s) | 303, 316, 802, 839, 938, 997, 1162 |
| HspAI | GCGC | 1 cut(s) | 1217 |
| Kpn2I | TCCGGA | 1 cut(s) | 1008 |
| Kzo9I | GATC | 5 cut(s) | 347, 888, 972, 1133, 1266 |
| LguI | GCTCTTC | 1 cut(s) | 870 |
| LmnI | GCTCC | 5 cut(s) | 9, 146, 296, 685, 905 |
| Lsp1109I | GCAGC | 4 cut(s) | 283, 746, 829, 1051 |
| LweI | GCATC | 4 cut(s) | 77, 219, 701, 916 |
| MaeI | CTAG | 1 cut(s) | 72 |
| MaeIII | GTNAC | 2 cut(s) | 161, 1174 |
| MalI | GATC | 5 cut(s) | 349, 890, 974, 1135, 1268 |
| MboI | GATC | 5 cut(s) | 347, 888, 972, 1133, 1266 |
| MboII | GAAGA | 8 cut(s) | 46, 419, 494, 566, 614, 857, 865, 1246 |
| MfeI | CAATTG | 1 cut(s) | 1080 |
| MflI | RGATCY | 1 cut(s) | 972 |
| MhlI | GDGCHC | 2 cut(s) | 120, 262 |
| MluCI | AATT | 4 cut(s) | 374, 491, 651, 1080 |
| MlyI | GAGTC | 1 cut(s) | 1243 |
| MroI | TCCGGA | 1 cut(s) | 1008 |
| MseI | TTAA | 2 cut(s) | 669, 1311 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1262 |
| MspA1I | CMGCKG | 1 cut(s) | 296 |
| MspI | CCGG | 3 cut(s) | 918, 1009, 1124 |
| MspR9I | CCNGG | 3 cut(s) | 829, 919, 1124 |
| MunI | CAATTG | 1 cut(s) | 1080 |
| MvaI | CCWGG | 1 cut(s) | 829 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 138, 635, 914, 935, 1164, 1216, 1235 |
| NciI | CCSGG | 2 cut(s) | 919, 1124 |
| NdeII | GATC | 5 cut(s) | 347, 888, 972, 1133, 1266 |
| NlaIII | CATG | 7 cut(s) | 303, 316, 802, 839, 938, 997, 1162 |
| NlaIV | GGNNCC | 5 cut(s) | 11, 292, 687, 974, 1225 |
| NmeAIII | GCCGAG | 1 cut(s) | 38 |
| NmuCI | GTSAC | 1 cut(s) | 1174 |
| NspI | RCATGY | 1 cut(s) | 938 |
| PaqCI | CACCTGC | 1 cut(s) | 820 |
| PciSI | GCTCTTC | 1 cut(s) | 870 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 343 |
| PfeI | GAWTC | 1 cut(s) | 818 |
| PkrI | GCNGC | 4 cut(s) | 298, 736, 844, 1041 |
| Ple19I | CGATCG | 1 cut(s) | 1136 |
| PleI | GAGTC | 1 cut(s) | 1243 |
| PpsI | GAGTC | 1 cut(s) | 1243 |
| PpuMI | RGGWCCY | 1 cut(s) | 251 |
| PsiI | TTATAA | 1 cut(s) | 942 |
| Psp5II | RGGWCCY | 1 cut(s) | 251 |
| Psp6I | CCWGG | 1 cut(s) | 827 |
| PspFI | CCCAGC | 2 cut(s) | 638, 1238 |
| PspGI | CCWGG | 1 cut(s) | 827 |
| PspN4I | GGNNCC | 5 cut(s) | 11, 292, 687, 974, 1225 |
| PspPI | GGNCC | 1 cut(s) | 251 |
| PspPPI | RGGWCCY | 1 cut(s) | 251 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 816, 848 |
| PstNI | CAGNNNCTG | 1 cut(s) | 695 |
| PsuI | RGATCY | 1 cut(s) | 972 |
| PvuI | CGATCG | 1 cut(s) | 1136 |
| RsaI | GTAC | 2 cut(s) | 171, 434 |
| RsaNI | GTAC | 2 cut(s) | 170, 433 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1262 |
| SapI | GCTCTTC | 1 cut(s) | 870 |
| SaqAI | TTAA | 2 cut(s) | 669, 1311 |
| SatI | GCNGC | 4 cut(s) | 297, 735, 843, 1040 |
| Sau3AI | GATC | 5 cut(s) | 347, 888, 972, 1133, 1266 |
| Sau96I | GGNCC | 1 cut(s) | 251 |
| SchI | GAGTC | 1 cut(s) | 1243 |
| ScrFI | CCNGG | 3 cut(s) | 829, 919, 1124 |
| SduI | GDGCHC | 2 cut(s) | 120, 262 |
| SfaNI | GCATC | 4 cut(s) | 77, 219, 701, 916 |
| SfcI | CTRYAG | 2 cut(s) | 204, 822 |
| SinI | GGWCC | 1 cut(s) | 251 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1262 |
| SmlI | CTYRAG | 1 cut(s) | 1323 |
| SmoI | CTYRAG | 1 cut(s) | 1323 |
| Sse9I | AATT | 4 cut(s) | 374, 491, 651, 1080 |
| SsiI | CCGC | 4 cut(s) | 100, 294, 392, 1227 |
| SspMI | CTAG | 1 cut(s) | 72 |
| StyD4I | CCNGG | 3 cut(s) | 827, 917, 1122 |
| StyI | CCWWGG | 2 cut(s) | 156, 631 |
| TaaI | ACNGT | 4 cut(s) | 196, 767, 1036, 1153 |
| TaqI | TCGA | 1 cut(s) | 1132 |
| TasI | AATT | 4 cut(s) | 374, 491, 651, 1080 |
| TatI | WGTACW | 1 cut(s) | 432 |
| TfiI | GAWTC | 1 cut(s) | 818 |
| Tru1I | TTAA | 2 cut(s) | 669, 1311 |
| Tru9I | TTAA | 2 cut(s) | 669, 1311 |
| TscAI | CASTG | 3 cut(s) | 199, 898, 1185 |
| TseFI | GTSAC | 1 cut(s) | 1174 |
| TseI | GCWGC | 4 cut(s) | 296, 734, 842, 1039 |
| Tsp45I | GTSAC | 1 cut(s) | 1174 |
| TspDTI | ATGAA | 3 cut(s) | 420, 824, 1010 |
| TspGWI | ACGGA | 2 cut(s) | 236, 261 |
| TspRI | CASTG | 3 cut(s) | 199, 898, 1185 |
| VpaK11BI | GGWCC | 1 cut(s) | 251 |
| XapI | RAATTY | 2 cut(s) | 374, 491 |
| XceI | RCATGY | 1 cut(s) | 938 |
| XspI | CTAG | 1 cut(s) | 72 |