TMV resistance protein N-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 2 cut(s) | 485, 512 |
| Acc36I | ACCTGC | 1 cut(s) | 457 |
| AccB1I | GGYRCC | 1 cut(s) | 240 |
| AccI | GTMKAC | 1 cut(s) | 537 |
| AciI | CCGC | 4 cut(s) | 64, 478, 486, 505 |
| AclWI | GGATC | 4 cut(s) | 269, 314, 327, 656 |
| AcyI | GRCGYC | 2 cut(s) | 482, 509 |
| AfaI | GTAC | 1 cut(s) | 89 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 237, 557 |
| AflIII | ACRYGT | 2 cut(s) | 84, 373 |
| AgsI | TTSAA | 1 cut(s) | 601 |
| AleI | CACNNNNGTG | 1 cut(s) | 238 |
| AluBI | AGCT | 1 cut(s) | 169 |
| AluI | AGCT | 1 cut(s) | 169 |
| AlwI | GGATC | 4 cut(s) | 269, 314, 327, 656 |
| AoxI | GGCC | 1 cut(s) | 69 |
| ApeKI | GCWGC | 3 cut(s) | 5, 579, 612 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 363, 395 |
| AspLEI | GCGC | 1 cut(s) | 107 |
| AsuHPI | GGTGA | 3 cut(s) | 183, 343, 580 |
| AxyI | CCTNAGG | 1 cut(s) | 422 |
| BamHI | GGATCC | 1 cut(s) | 319 |
| BanI | GGYRCC | 1 cut(s) | 240 |
| BanII | GRGCYC | 1 cut(s) | 421 |
| BbsI | GAAGAC | 1 cut(s) | 202 |
| BbvI | GCAGC | 2 cut(s) | 591, 624 |
| BccI | CCATC | 2 cut(s) | 331, 442 |
| BceAI | ACGGC | 1 cut(s) | 556 |
| BclI | TGATCA | 1 cut(s) | 79 |
| BfaI | CTAG | 3 cut(s) | 575, 608, 676 |
| BfmI | CTRYAG | 2 cut(s) | 170, 653 |
| BfuAI | ACCTGC | 1 cut(s) | 457 |
| BisI | GCNGC | 3 cut(s) | 6, 580, 613 |
| BlsI | GCNGC | 3 cut(s) | 7, 581, 614 |
| BmiI | GGNNCC | 3 cut(s) | 151, 242, 321 |
| BpiI | GAAGAC | 1 cut(s) | 202 |
| BpuEI | CTTGAG | 1 cut(s) | 61 |
| BsaBI | GATNNNNATC | 1 cut(s) | 318 |
| BsaHI | GRCGYC | 2 cut(s) | 482, 509 |
| BsaJI | CCNNGG | 1 cut(s) | 216 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 435, 465 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 237, 557 |
| Bse1I | ACTGG | 1 cut(s) | 633 |
| Bse21I | CCTNAGG | 1 cut(s) | 422 |
| Bse8I | GATNNNNATC | 1 cut(s) | 318 |
| BseDI | CCNNGG | 1 cut(s) | 216 |
| BseGI | GGATG | 1 cut(s) | 453 |
| BseJI | GATNNNNATC | 1 cut(s) | 318 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 237, 557 |
| BseNI | ACTGG | 1 cut(s) | 633 |
| BseRI | GAGGAG | 1 cut(s) | 7 |
| BseXI | GCAGC | 2 cut(s) | 591, 624 |
| BshFI | GGCC | 1 cut(s) | 71 |
| BshNI | GGYRCC | 1 cut(s) | 240 |
| BsiSI | CCGG | 1 cut(s) | 108 |
| BslFI | GGGAC | 1 cut(s) | 657 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 237, 557 |
| BsmFI | GGGAC | 1 cut(s) | 657 |
| BsnI | GGCC | 1 cut(s) | 71 |
| Bsp1286I | GDGCHC | 1 cut(s) | 421 |
| Bsp1407I | TGTACA | 1 cut(s) | 87 |
| Bsp143I | GATC | 7 cut(s) | 79, 138, 261, 319, 460, 527, 661 |
| BspACI | CCGC | 4 cut(s) | 64, 478, 486, 505 |
| BspANI | GGCC | 1 cut(s) | 71 |
| BspLI | GGNNCC | 3 cut(s) | 151, 242, 321 |
| BspMAI | CTGCAG | 1 cut(s) | 657 |
| BspMI | ACCTGC | 1 cut(s) | 457 |
| BspPI | GGATC | 4 cut(s) | 269, 314, 327, 656 |
| BspQI | GCTCTTC | 1 cut(s) | 409 |
| BspT107I | GGYRCC | 1 cut(s) | 240 |
| BsrGI | TGTACA | 1 cut(s) | 87 |
| BsrI | ACTGG | 1 cut(s) | 633 |
| BssECI | CCNNGG | 1 cut(s) | 216 |
| BssMI | GATC | 7 cut(s) | 79, 138, 261, 319, 460, 527, 661 |
| BssNI | GRCGYC | 2 cut(s) | 482, 509 |
| BssT1I | CCWWGG | 1 cut(s) | 216 |
| Bst4CI | ACNGT | 4 cut(s) | 26, 92, 237, 564 |
| Bst6I | CTCTTC | 1 cut(s) | 409 |
| BstACI | GRCGYC | 2 cut(s) | 482, 509 |
| BstAUI | TGTACA | 1 cut(s) | 87 |
| BstDEI | CTNAG | 1 cut(s) | 422 |
| BstF5I | GGATG | 1 cut(s) | 453 |
| BstHHI | GCGC | 1 cut(s) | 107 |
| BstKTI | GATC | 7 cut(s) | 82, 141, 264, 322, 463, 530, 664 |
| BstMBI | GATC | 7 cut(s) | 79, 138, 261, 319, 460, 527, 661 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 158, 494 |
| BstNSI | RCATGY | 2 cut(s) | 88, 377 |
| BstSFI | CTRYAG | 2 cut(s) | 170, 653 |
| BstV1I | GCAGC | 2 cut(s) | 591, 624 |
| BstV2I | GAAGAC | 1 cut(s) | 202 |
| BstX2I | RGATCY | 1 cut(s) | 319 |
| BstYI | RGATCY | 1 cut(s) | 319 |
| Bsu36I | CCTNAGG | 1 cut(s) | 422 |
| BsuRI | GGCC | 1 cut(s) | 71 |
| BtsCI | GGATG | 1 cut(s) | 453 |
| BtsI | GCAGTG | 2 cut(s) | 107, 615 |
| BtsIMutI | CAGTG | 3 cut(s) | 97, 107, 615 |
| BveI | ACCTGC | 1 cut(s) | 457 |
| CfoI | GCGC | 1 cut(s) | 107 |
| Csp6I | GTAC | 1 cut(s) | 88 |
| CviAII | CATG | 5 cut(s) | 32, 85, 185, 265, 374 |
| CviJI | RGCY | 7 cut(s) | 5, 71, 152, 169, 222, 419, 497 |
| CviKI_1 | RGCY | 7 cut(s) | 5, 71, 152, 169, 222, 419, 497 |
| CviQI | GTAC | 1 cut(s) | 88 |
| DdeI | CTNAG | 1 cut(s) | 422 |
| DpnI | GATC | 7 cut(s) | 81, 140, 263, 321, 462, 529, 663 |
| DpnII | GATC | 7 cut(s) | 79, 138, 261, 319, 460, 527, 661 |
| Eam1104I | CTCTTC | 1 cut(s) | 409 |
| EarI | CTCTTC | 1 cut(s) | 409 |
| EciI | GGCGGA | 1 cut(s) | 493 |
| Eco130I | CCWWGG | 1 cut(s) | 216 |
| Eco147I | AGGCCT | 1 cut(s) | 71 |
| Eco24I | GRGCYC | 1 cut(s) | 421 |
| Eco81I | CCTNAGG | 1 cut(s) | 422 |
| EcoT14I | CCWWGG | 1 cut(s) | 216 |
| EcoT38I | GRGCYC | 1 cut(s) | 421 |
| ErhI | CCWWGG | 1 cut(s) | 216 |
| FaeI | CATG | 5 cut(s) | 35, 88, 188, 268, 377 |
| FaiI | YATR | 7 cut(s) | 33, 86, 117, 186, 203, 266, 375 |
| FaqI | GGGAC | 1 cut(s) | 657 |
| FatI | CATG | 5 cut(s) | 31, 84, 184, 264, 373 |
| FauI | CCCGC | 1 cut(s) | 71 |
| FbaI | TGATCA | 1 cut(s) | 79 |
| FblI | GTMKAC | 1 cut(s) | 537 |
| Fnu4HI | GCNGC | 3 cut(s) | 6, 580, 613 |
| FokI | GGATG | 1 cut(s) | 460 |
| FriOI | GRGCYC | 1 cut(s) | 421 |
| Fsp4HI | GCNGC | 3 cut(s) | 6, 580, 613 |
| FspBI | CTAG | 3 cut(s) | 575, 608, 676 |
| GlaI | GCGC | 1 cut(s) | 106 |
| GluI | GCNGC | 3 cut(s) | 6, 580, 613 |
| HaeIII | GGCC | 1 cut(s) | 71 |
| HapII | CCGG | 1 cut(s) | 108 |
| HhaI | GCGC | 1 cut(s) | 107 |
| Hin1I | GRCGYC | 2 cut(s) | 482, 509 |
| Hin1II | CATG | 5 cut(s) | 35, 88, 188, 268, 377 |
| Hin6I | GCGC | 1 cut(s) | 105 |
| HinP1I | GCGC | 1 cut(s) | 105 |
| HincII | GTYRAC | 1 cut(s) | 538 |
| HindII | GTYRAC | 1 cut(s) | 538 |
| HinfI | GANTC | 3 cut(s) | 111, 188, 641 |
| HpaII | CCGG | 1 cut(s) | 108 |
| HphI | GGTGA | 3 cut(s) | 183, 343, 580 |
| Hpy166II | GTNNAC | 1 cut(s) | 538 |
| Hpy188I | TCNGA | 4 cut(s) | 328, 514, 560, 666 |
| Hpy188III | TCNNGA | 2 cut(s) | 40, 142 |
| Hpy8I | GTNNAC | 1 cut(s) | 538 |
| Hpy99I | CGWCG | 3 cut(s) | 514, 542, 641 |
| HpyAV | CCTTC | 1 cut(s) | 562 |
| HpyCH4III | ACNGT | 4 cut(s) | 26, 92, 237, 564 |
| HpyCH4IV | ACGT | 2 cut(s) | 482, 509 |
| HpyCH4V | TGCA | 6 cut(s) | 100, 257, 356, 434, 620, 655 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 158, 494 |
| HpyF3I | CTNAG | 1 cut(s) | 422 |
| HpySE526I | ACGT | 2 cut(s) | 482, 509 |
| Hsp92I | GRCGYC | 2 cut(s) | 482, 509 |
| Hsp92II | CATG | 5 cut(s) | 35, 88, 188, 268, 377 |
| HspAI | GCGC | 1 cut(s) | 105 |
| Ksp22I | TGATCA | 1 cut(s) | 79 |
| Kzo9I | GATC | 7 cut(s) | 79, 138, 261, 319, 460, 527, 661 |
| LguI | GCTCTTC | 1 cut(s) | 409 |
| LmnI | GCTCC | 1 cut(s) | 149 |
| LpnPI | CCDG | 5 cut(s) | 121, 175, 257, 452, 614 |
| Lsp1109I | GCAGC | 2 cut(s) | 591, 624 |
| MaeI | CTAG | 3 cut(s) | 575, 608, 676 |
| MaeII | ACGT | 2 cut(s) | 482, 509 |
| MaeIII | GTNAC | 1 cut(s) | 189 |
| MalI | GATC | 7 cut(s) | 81, 140, 263, 321, 462, 529, 663 |
| MboI | GATC | 7 cut(s) | 79, 138, 261, 319, 460, 527, 661 |
| MboII | GAAGA | 2 cut(s) | 202, 426 |
| MflI | RGATCY | 1 cut(s) | 319 |
| MhlI | GDGCHC | 1 cut(s) | 421 |
| MluCI | AATT | 2 cut(s) | 204, 621 |
| MlyI | GAGTC | 2 cut(s) | 197, 635 |
| MmeI | TCCRAC | 2 cut(s) | 492, 538 |
| MseI | TTAA | 1 cut(s) | 624 |
| MslI | CAYNNNNRTG | 1 cut(s) | 238 |
| MspI | CCGG | 1 cut(s) | 108 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 158, 494 |
| NdeII | GATC | 7 cut(s) | 79, 138, 261, 319, 460, 527, 661 |
| NlaIII | CATG | 5 cut(s) | 35, 88, 188, 268, 377 |
| NlaIV | GGNNCC | 3 cut(s) | 151, 242, 321 |
| NmuCI | GTSAC | 1 cut(s) | 189 |
| NspI | RCATGY | 2 cut(s) | 88, 377 |
| OliI | CACNNNNGTG | 1 cut(s) | 238 |
| PceI | AGGCCT | 1 cut(s) | 71 |
| PciI | ACATGT | 2 cut(s) | 84, 373 |
| PciSI | GCTCTTC | 1 cut(s) | 409 |
| PfeI | GAWTC | 1 cut(s) | 111 |
| PkrI | GCNGC | 3 cut(s) | 7, 581, 614 |
| PleI | GAGTC | 2 cut(s) | 196, 635 |
| PpsI | GAGTC | 2 cut(s) | 196, 635 |
| PscI | ACATGT | 2 cut(s) | 84, 373 |
| PspN4I | GGNNCC | 3 cut(s) | 151, 242, 321 |
| PstI | CTGCAG | 1 cut(s) | 657 |
| PsuI | RGATCY | 1 cut(s) | 319 |
| RsaI | GTAC | 1 cut(s) | 89 |
| RsaNI | GTAC | 1 cut(s) | 88 |
| RseI | CAYNNNNRTG | 1 cut(s) | 238 |
| SalI | GTCGAC | 1 cut(s) | 536 |
| SapI | GCTCTTC | 1 cut(s) | 409 |
| SaqAI | TTAA | 1 cut(s) | 624 |
| SatI | GCNGC | 3 cut(s) | 6, 580, 613 |
| Sau3AI | GATC | 7 cut(s) | 79, 138, 261, 319, 460, 527, 661 |
| SchI | GAGTC | 2 cut(s) | 197, 635 |
| SduI | GDGCHC | 1 cut(s) | 421 |
| SfcI | CTRYAG | 2 cut(s) | 170, 653 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 238 |
| SmlI | CTYRAG | 1 cut(s) | 40 |
| SmoI | CTYRAG | 1 cut(s) | 40 |
| Sse9I | AATT | 2 cut(s) | 204, 621 |
| SseBI | AGGCCT | 1 cut(s) | 71 |
| SsiI | CCGC | 4 cut(s) | 64, 478, 486, 505 |
| SspMI | CTAG | 3 cut(s) | 575, 608, 676 |
| StuI | AGGCCT | 1 cut(s) | 71 |
| StyI | CCWWGG | 1 cut(s) | 216 |
| TaaI | ACNGT | 4 cut(s) | 26, 92, 237, 564 |
| TaiI | ACGT | 2 cut(s) | 485, 512 |
| TaqI | TCGA | 4 cut(s) | 381, 526, 537, 566 |
| TaqII | GACCGA | 1 cut(s) | 674 |
| TasI | AATT | 2 cut(s) | 204, 621 |
| TatI | WGTACW | 1 cut(s) | 87 |
| TfiI | GAWTC | 1 cut(s) | 111 |
| Tru1I | TTAA | 1 cut(s) | 624 |
| Tru9I | TTAA | 1 cut(s) | 624 |
| TscAI | CASTG | 3 cut(s) | 97, 107, 622 |
| TseFI | GTSAC | 1 cut(s) | 189 |
| TseI | GCWGC | 3 cut(s) | 5, 579, 612 |
| Tsp45I | GTSAC | 1 cut(s) | 189 |
| TspRI | CASTG | 3 cut(s) | 97, 107, 622 |
| XceI | RCATGY | 2 cut(s) | 88, 377 |
| XmiI | GTMKAC | 1 cut(s) | 537 |
| XspI | CTAG | 3 cut(s) | 575, 608, 676 |
| ZraI | GACGTC | 2 cut(s) | 483, 510 |