Rmu_sc0001731.1_g000005

TMV resistance protein N-like

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001731.1
Physical Location & Seq
Forward (+)
15711 .. 20991
5281 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001731.1_g000005.1.cds

Sequence Viewer

Length: 3771 bp
atggcttctcctaatgatggatattgtaggtatcatgtgttcttgagtttcagaggcgaagacacgcgtaagactttcactgaccacctctacacagcctttgtcgaccaaggctttcgcactttccgagatgacgatgaactcgagagaggggaggatatcaacccgggacttgagaaagccattcaacagtcaagaagttctgttattgtcttctcgaaagattacgcatcttcaagatggtgccttaatgagcttttgatgatccttgagcgcaagaggacctcctccgattatgttgttttacctgttttctacaacgtggatccatcccaagtgaggaagcagaccggcagttttgcggaggcatttgccagacaccaagaaaatgaaccgtcgaacaaggtgaaagaatggagggctgcacttgcaaaagttgcagatctaggagggaaggtcttgaagaaccaagatgatgggtacgagtcaaagtttataaaaggtgtcgttaaagagataggaaacaagcttagtcgtacaccattgagtgttggcttcaacctgattggaatccattctcgagctaacaaaattaatctatggatacaagatggatcaactgatgtaggtatccttgtaatttttgggatgtcgggaatagggaagacaacaatcgcaaaatatgtctataatttgaacttcagagaatttgaaggaagcagtttcattgaaaatattagagaaacttcagaacaaaccaatggcctagttcaactacaaaaacagctcctttctgatattttaaatggaagagaagtgaaagtacataatgctagccagggaaaaattaagattgaggatgccataagctgtaaaagagttcttcttgttctcgatgacgtggatcatatcgaccaatttgatgcattactgacaatgcgagagcgattttatccgggaagtaaaattgtcataacaactaggcgagcaaggctgttaaaggcacggggagttactatggtgcattctgttcgagctttgaaatacaatgaatcattgaagctcttcagttggcatgcttttcgacaagatcatccaattgaaggttacgagaaacatactgaaaagtttgtacgccatggcgcagggcttccattagctcttcaagttttaggttcttctctatttggggaaagtatagttttatgggaaagtgcattgaagaaactagaagctattcccaatagtgaaatcatgaataaactcaaaatgagttatgatgtactcgataaacatgatcaggaagtgttcctccacattgcttgttgcttcattggaaatgacaaggattacactgttgcaatactagatggatgtaatttgtacactactgttgccattatgaatctcattgatagatgcctagtaacaattggccccacgaacaaggtggtgatgcatgacatgattcgtgatatgggaagagaaattgttcgcctagaagcagaggagcctcggaaacgtagtagattatggcattacaaggactccttcaaagtactgagagaaaagaatggtacaaaaacaattgaaagtcttgaattaaacatgcaaaggcatcttgaagtcactaactcaagatatcccaacgagattgtcttggaaaccaatgcatttgcaaagatgcacaaactaaaactactccggttaagtcaagtaaatctcactggaagctttgaaaaatttccgactggattgagattgttgtgttggattgcatttcctttggattctataccgattgattttcatttggagaacctggttgttcttgaaatgcagtacagcagcttgagacaaatattgagtggaacaaagtgttttccatccttgaagatgcttgatctcagccattcccatgcccttattgctacccttgacttttctctttgtcccaatttagagaaactcatgcttatagattgtaaaggcttgattgatgtccatgagtccattggaattctagacagacttgtttacttgaacatgaaagattgcaaaactcttagcatgcttccaaagaatattggtaagctaaagctacttgacacacttattgtatctggttgttcaaatcttagcaactcttcaatagagatgattaggagcatggagtctctgaaagtgcttgaactagatagaattccaataagtcaattattcactctctgtgggaaggtcaagtcggggagttatttaccaggctctttactatcattaagtctgagtgggtgtaatctttctgatgatgcttttcctgtggatttcactagccttttctctctgagaagtttaaatctaagtgataatccaataactggcctacccaattgcgtcaagggtctgacaagtctagatgaactctccttttacaactgtttgagcctcgaatcccttgtagagctaccaaaagtaggtttcaagttgaatgtatccggttgcgaagcattggtaagaataacatatcagtcaaaatcctgtgctcaatttccacgcctgagtggtaagaactacagcctagttgagtgggaatatgaatataagttagaacccattggaaaagttgatgtagaattgctcaaacttttgggcttgagcaacttggactttgaatgcaggccaaccattcggttgtgcgaaaaatacaatggttacgacataattcatcatggtggaatacagggactgcatgagtatggttgtacaaactcttacttccaaggaaatgcaagaaagatagacatgtttagtacatttcttcccgggaatgaggttccaggccaattcagccatagaactaaaggctcttcctcaatatcattaactgtgcctttgccttcagatcatgatctgagaatccgaggctttaacatcttcattgtctatgcaatttcagacaatgacgatgaaagatattcttcatgtcctgaccagggttcaataactatcaatgtcataaatgagagcgacgacagcaactggcattatgagccaatatatcacggtattccgggtaagggagaagacatgatatggttaacccattggaatatggagaatcaagtaaaaggtagggatcaagtggctgtttcactctcggtaaaacatgcaaggtttcggtatcaggtaaaggagtgggggatccaggttgtacaagagaagcaagaaggtaagatgtgtaccgaccactacaccacaaatcccatttgttttccatgtgccactggtggagatttgttaacatctgatgagccgttgaggggaacatacttgctgtcctatgaacctgattcaacggtagataaagataaaaaaggagatgatgaagaagaggcagtgggtgatcctattcctgcatcagcaatgggggatggcagcaacaacagtgatcggggtctcagaaagtggaaggtgctcatcattgccgctatcatccttgctgctcatcgttttgaagactctgctctagacacaaatctagctgaaactgtcactaatgcagacaatgaagaagaacaacggcatgaagatgacaagcttgcaacagcgaccaatactgacggcagtaacaaccgtgcgcgggatcccagaaagtggaaggtgctcatcattgctgctgtcatgttaattctctgtttatctgttcgctggttcttctttttctctgccagagacagatacatggagtctaatattttggttcctacatga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1256

Amino Acids

142.07

Weight (kDa)

6.21

Isoelectric Point (pI)

35.5

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000036)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G57630 AT1G72930 AT5G38344
fragaria_vesca FvH4_1g27020 FvH4_2g00931 FvH4_2g17330 FvH4_2g17330 FvH4_2g17340 FvH4_2g17350 FvH4_2g20690 FvH4_5g15301 FvH4_5g34194 FvH4_5g38530 FvH4_5g38740 FvH4_5g38740 FvH4_5g38740 FvH4_6g03800 FvH4_7g09791 FvH4_7g09800 FvH4_7g09800 FvH4_7g10510 FvH4_7g10520 FvH4_7g10520 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750
malus_domestica MD02G1217100.v1.1 MD02G1217200.v1.1 MD02G1217400.v1.1 MD02G1217600.v1.1 MD02G1264800.v1.1 MD02G1264900.v1.1 MD02G1302100.v1.1 MD04G1010700.v1.1 MD05G1006800.v1.1 MD05G1140100.v1.1 MD05G1140200.v1.1 MD05G1152200.v1.1 MD07G1073500.v1.1 MD07G1101700.v1.1 MD07G1102200.v1.1 MD07G1103200.v1.1 MD07G1112300.v1.1 MD08G1018200.v1.1 MD08G1018400.v1.1 MD08G1018800.v1.1 MD08G1019000.v1.1 MD08G1019100.v1.1 MD08G1019200.v1.1 MD08G1019300.v1.1 MD08G1019400.v1.1 MD08G1019600.v1.1 MD08G1019900.v1.1 MD08G1020000.v1.1 MD08G1020200.v1.1 MD08G1020500.v1.1 MD08G1020700.v1.1 MD08G1020800.v1.1 MD08G1040700.v1.1 MD11G1112400.v1.1 MD12G1068600.v1.1 MD12G1193200.v1.1 MD13G1050600.v1.1 MD15G1374900.v1.1 MD15G1375100.v1.1 MD15G1416500.v1.1 MD17G1072500.v1.1 MD17G1274200.v1.1 MD17G1274900.v1.1
prunus_persica Prupe.2G121000_v2.0.a1 Prupe.2G121000_v2.0.a1 Prupe.2G125800_v2.0.a1 Prupe.2G126000_v2.0.a1 Prupe.2G126100_v2.0.a1 Prupe.2G126200_v2.0.a1 Prupe.2G126300_v2.0.a1 Prupe.2G126400_v2.0.a1 Prupe.2G126500_v2.0.a1 Prupe.2G126600_v2.0.a1 Prupe.2G126700_v2.0.a1 Prupe.2G126700_v2.0.a1 Prupe.2G126800_v2.0.a1 Prupe.2G126900_v2.0.a1 Prupe.2G127000_v2.0.a1 Prupe.2G127000_v2.0.a1 Prupe.2G127000_v2.0.a1 Prupe.2G127000_v2.0.a1 Prupe.2G135500_v2.0.a1 Prupe.2G135600_v2.0.a1 Prupe.2G135700_v2.0.a1 Prupe.2G135700_v2.0.a1 Prupe.3G009800_v2.0.a1 Prupe.3G010200_v2.0.a1 Prupe.3G131000_v2.0.a1 Prupe.4G260800_v2.0.a1 Prupe.4G260900_v2.0.a1 Prupe.6G083100_v2.0.a1 Prupe.6G083200_v2.0.a1 Prupe.6G083400_v2.0.a1 Prupe.6G132100_v2.0.a1 Prupe.8G184900_v2.0.a1 Prupe.8G185200_v2.0.a1 Prupe.8G185300_v2.0.a1
pyrus_communis pycom02g17870 pycom02g17880 pycom02g19520 pycom02g22610 pycom02g22630 pycom02g22680 pycom05g13540 pycom05g14680 pycom07g04880 pycom07g04890 pycom07g05690 pycom07g05710 pycom07g05720 pycom07g05750 pycom07g05780 pycom07g06300 pycom07g08320 pycom07g08330 pycom07g08350 pycom07g08360 pycom07g08370 pycom07g08410 pycom07g08420 pycom07g08430 pycom07g08440 pycom07g08470 pycom07g08480 pycom07g08520 pycom07g08550 pycom07g08560 pycom07g08640 pycom07g08660 pycom07g08670 pycom07g08680 pycom07g08690 pycom07g08720 pycom07g08730 pycom07g08790 pycom07g08800 pycom07g08810 pycom07g08860 pycom07g08890 pycom07g09720 pycom08g01590 pycom08g01600 pycom08g01620 pycom08g01630 pycom08g01640 pycom10g12630 pycom15g16490 pycom17g07200 pycom17g07210 pycom17g07220 pycom17g11730 pycom17g11740 pycom17g27340 pycom17g27380
rosa_chinensis RchiOBHm_Chr1g0342571 RchiOBHm_Chr1g0346231 RchiOBHm_Chr1g0346831 RchiOBHm_Chr1g0346891 RchiOBHm_Chr1g0348311 RchiOBHm_Chr1g0348321 RchiOBHm_Chr1g0348331 RchiOBHm_Chr1g0348361 RchiOBHm_Chr1g0348371 RchiOBHm_Chr1g0348381 RchiOBHm_Chr1g0348401 RchiOBHm_Chr1g0348411 RchiOBHm_Chr1g0348421 RchiOBHm_Chr1g0348431 RchiOBHm_Chr2g0130881 RchiOBHm_Chr3g0487331 RchiOBHm_Chr5g0060371 RchiOBHm_Chr6g0246491 RchiOBHm_Chr6g0246871 RchiOBHm_Chr6g0250311 RchiOBHm_Chr6g0250781 RchiOBHm_Chr6g0251431 RchiOBHm_Chr6g0281871 RchiOBHm_Chr6g0281881 RchiOBHm_Chr6g0281931 RchiOBHm_Chr6g0281941 RchiOBHm_Chr6g0281951 RchiOBHm_Chr6g0281971 RchiOBHm_Chr6g0281981 RchiOBHm_Chr7g0240541 RchiOBHm_Chr7g0240631 RchiOBHm_Chr7g0240671
rosa_laevigata RLG00000000627 RLG00000000631 RLG00000000641 RLG00000000645 RLG00000000652 RLG00000000662 RLG00000000663 RLG00000000667 RLG00000000670 RLG00000000702 RLG00000001216 RLG00000001219 RLG00000007678 RLG00000012923 RLG00000012996 RLG00000013243 RLG00000017513 RLG00000017514 RLG00000020936 RLG00000022755 RLG00000023013 RLG00000028646 RLG00000028654 RLG00000028662 RLG00000028665 RLG00000028667 RLG00000028711 RLG00000028714 RLG00000028716 RLG00000028770 RLG00000028771 RLG00000028773 RLG00000028778 RLG00000028798 RLG00000028809 RLG00000028813 RLG00000029334 RLG00000030003 RLG00000033910 RLG00000034358 RLG00000035430
rosa_multiflora Rmu_co8031134.1_g000001 Rmu_co8092796.1_g000001 Rmu_co8130156.1_g000001 Rmu_co8325323.1_g000001 Rmu_co8424083.1_g000002 Rmu_sc0000008.1_g000003 Rmu_sc0000008.1_g000011 Rmu_sc0000008.1_g000015 Rmu_sc0000008.1_g000020 Rmu_sc0000091.1_g000015 Rmu_sc0000091.1_g000018 Rmu_sc0000091.1_g000029 Rmu_sc0000091.1_g000031 Rmu_sc0000391.1_g000004 Rmu_sc0001070.1_g000030 Rmu_sc0001293.1_g000016 Rmu_sc0001674.1_g000006 Rmu_sc0001731.1_g000002 Rmu_sc0001731.1_g000003 Rmu_sc0001731.1_g000005 Rmu_sc0001911.1_g000029 Rmu_sc0001913.1_g000038 Rmu_sc0001955.1_g000025 Rmu_sc0001992.1_g000022 Rmu_sc0001992.1_g000028 Rmu_sc0001992.1_g000031 Rmu_sc0002517.1_g000013 Rmu_sc0002517.1_g000017 Rmu_sc0002551.1_g000022 Rmu_sc0002551.1_g000029 Rmu_sc0002551.1_g000038 Rmu_sc0002705.1_g000015 Rmu_sc0002705.1_g000016 Rmu_sc0002882.1_g000055 Rmu_sc0003232.1_g000027 Rmu_sc0003363.1_g000037 Rmu_sc0003600.1_g000054 Rmu_sc0003918.1_g000011 Rmu_sc0004395.1_g000011 Rmu_sc0005071.1_g000004 Rmu_sc0005255.1_g000018 Rmu_sc0005327.1_g000004 Rmu_sc0005597.1_g000007 Rmu_sc0007060.1_g000007 Rmu_sc0007310.1_g000003 Rmu_sc0007383.1_g000014 Rmu_sc0007799.1_g000003 Rmu_sc0008477.1_g000016 Rmu_sc0010151.1_g000009 Rmu_sc0011217.1_g000005 Rmu_sc0016269.1_g000006 Rmu_sc0021495.1_g000001 Rmu_sc0027364.1_g000001 Rmu_sc0029432.1_g000001 Rmu_sc0041386.1_g000001 Rmu_ssc0000126.1_g000023 Rmu_ssc0000126.1_g000027
rosa_roxburghii Rroxscaffold_1G00006130 Rroxscaffold_1G00023320 Rroxscaffold_1G00038770 Rroxscaffold_2G00119800 Rroxscaffold_2G00121860 Rroxscaffold_3G00219780 Rroxscaffold_3G00219890 Rroxscaffold_4G00306740 Rroxscaffold_4G00306820 Rroxscaffold_4G00307000 Rroxscaffold_4G00307010 Rroxscaffold_4G00307020 Rroxscaffold_4G00308030 Rroxscaffold_4G00308070 Rroxscaffold_4G00308450 Rroxscaffold_4G00308460 Rroxscaffold_4G00315320 Rroxscaffold_5G00352470 Rroxscaffold_5G00371420 Rroxscaffold_6G00392300 Rroxscaffold_6G00394870 Rroxscaffold_6G00394890 Rroxscaffold_7G00186700 Rroxscaffold_7G00194980 Rroxscaffold_7G00216840
rosa_rugosa Rorug01G0076100 Rorug01G0128100 Rorug01G0149000.1 Rorug01G0149500.1 Rorug01G0180000 Rorug01G0180100 Rorug01G0182900 Rorug01G0184000 Rorug01G0184100 Rorug01G0184300 Rorug01G0184600 Rorug01G0184700 Rorug01G0184700 Rorug01G0184900 Rorug01G0185000 Rorug01G0185100 Rorug01G0189300 Rorug01G0194100 Rorug01G0194100 Rorug01G0194200 Rorug01G0194400 Rorug01G0194400 Rorug01G0194500 Rorug02G0090400 Rorug02G0090400 Rorug03G0233000 Rorug03G0233100 Rorug05G0178600 Rorug05G0178700 Rorug05G0579200 Rorug06G0144100 Rorug06G0144300 Rorug06G0144300 Rorug06G0179300 Rorug06G0208800 Rorug07G0323500 Rorug07G0337000
rosa_samantha Rh1AG046100 Rh1AG201400 Rh1AG201800 Rh1AG202100 Rh1AG202600 Rh1AG211500 Rh1AG211800 Rh1AG212200 Rh1AG212500 Rh1AG212600 Rh1AG214200 Rh1BG168000 Rh1BG168300 Rh1BG168500 Rh1BG177900 Rh1BG178200 Rh1BG178300 Rh1BG178800 Rh1BG178900 Rh1CG080900 Rh1CG183300 Rh1CG186300 Rh1CG186700 Rh1CG187000 Rh1CG187300 Rh1CG193400 Rh1CG195800 Rh1CG196000 Rh1CG196100 Rh1CG196400 Rh1CG196500 Rh1CG196800 Rh1CG198800 Rh1CG442600 Rh1DG086200 Rh1DG155400 Rh1DG156200 Rh1DG194000 Rh1DG194300 Rh1DG194900 Rh1DG197000 Rh1DG198800 Rh1DG199000 Rh1DG199200 Rh1DG202000 Rh1DG203900 Rh1DG207600 Rh1DG207900 Rh1DG208000 Rh1DG208500 Rh1DG208600 Rh1DG208700 Rh3CG339100 Rh5AG106500 Rh5AG264800 Rh5AG265300 Rh5CG302800 Rh5DG277900 Rh6AG257600 Rh6AG257700 Rh6BG260500 Rh6BG260700 Rh6CG259600 Rh6CG259700 Rh6DG252100 Rh7DG126900
rosa_wichuraiana Rw0G005780 Rw0G007540 Rw0G007550 Rw0G007560 Rw0G009390 Rw1G016900 Rw1G016930 Rw1G016940 Rw1G016970 Rw1G017860 Rw1G017890 Rw1G017900 Rw1G017910 Rw1G017920 Rw1G017960 Rw1G017970 Rw1G017980 Rw1G018150 Rw4G000830 Rw5G009290 Rw5G018950 Rw5G024850 Rw5G024870 Rw5G040460 Rw6G022290 Rw7G041020 Rw7G041200 Rw7G041360 Rw7G041450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 497
AccB1I GGYRCC 1 cut(s) 243
AccB7I CCANNNNNTGG 2 cut(s) 2378, 3654
AccI GTMKAC 1 cut(s) 105
AccII CGCG 2 cut(s) 67, 3640
AciI CCGC 3 cut(s) 362, 3486, 3640
AcsI RAATTY 4 cut(s) 707, 1742, 2019, 2202
AcuI CTGAAG 4 cut(s) 685, 732, 1051, 2883
AflIII ACRYGT 2 cut(s) 65, 2802
AjiI CACGTC 1 cut(s) 901
AjnI CCWGG 6 cut(s) 837, 1821, 2260, 2836, 2991, 3204
Alw21I GWGCWC 3 cut(s) 2545, 3477, 3666
Alw26I GTCTC 4 cut(s) 1849, 2181, 3461, 3726
AlwNI CAGNNNCTG 2 cut(s) 2746, 3039
Ama87I CYCGRG 4 cut(s) 143, 166, 579, 2822
AoxI GGCC 5 cut(s) 763, 1435, 2380, 2678, 2839
ApeKI GCWGC 5 cut(s) 422, 1848, 3435, 3500, 3674
ApoI RAATTY 4 cut(s) 707, 1742, 2019, 2202
AseI ATTAAT 1 cut(s) 594
Asp700I GAANNNNTTC 5 cut(s) 574, 1064, 1236, 1491, 1743
AspLEI GCGC 3 cut(s) 276, 1145, 3640
AspS9I GGNCC 2 cut(s) 282, 1436
AsuC2I CCSGG 6 cut(s) 167, 168, 957, 2823, 2824, 3072
AsuHPI GGTGA 3 cut(s) 418, 1465, 3413
AsuNHI GCTAGC 1 cut(s) 833
AvaI CYCGRG 4 cut(s) 143, 166, 579, 2822
AvaII GGWCC 1 cut(s) 282
BamHI GGATCC 3 cut(s) 325, 3201, 3643
BanI GGYRCC 1 cut(s) 243
BarI GAAGNNNNNNTAC 2 cut(s) 807, 839
BbsI GAAGAC 5 cut(s) 66, 205, 671, 3090, 3522
Bbv12I GWGCWC 3 cut(s) 2545, 3477, 3666
BbvI GCAGC 5 cut(s) 409, 1860, 3447, 3487, 3661
BccI CCATC 8 cut(s) 11, 234, 337, 470, 605, 1364, 1894, 3425
BceAI ACGGC 3 cut(s) 3298, 3596, 3637
BcgI CGANNNNNNTGC 4 cut(s) 1013, 1047, 1064, 1098
BciT130I CCWGG 6 cut(s) 839, 1823, 2262, 2838, 2993, 3206
BciVI GTATCC 3 cut(s) 597, 641, 2503
BclI TGATCA 1 cut(s) 1297
BcnI CCSGG 6 cut(s) 167, 168, 957, 2823, 2824, 3072
BcoDI GTCTC 4 cut(s) 1849, 2181, 3461, 3726
BfmI CTRYAG 1 cut(s) 2572
BfuI GTATCC 3 cut(s) 597, 641, 2503
BglII AGATCT 1 cut(s) 442
BisI GCNGC 6 cut(s) 423, 1849, 3436, 3486, 3501, 3675
BlsI GCNGC 6 cut(s) 424, 1850, 3437, 3487, 3502, 3676
BmcAI AGTACT 1 cut(s) 1560
Bme18I GGWCC 1 cut(s) 282
BmeT110I CYCGRG 4 cut(s) 143, 166, 579, 2822
BmgBI CACGTC 1 cut(s) 901
BmgT120I GGNCC 2 cut(s) 282, 1436
BmiI GGNNCC 8 cut(s) 245, 327, 1438, 1512, 2835, 3203, 3645, 3762
BmtI GCTAGC 1 cut(s) 837
BpiI GAAGAC 5 cut(s) 66, 205, 671, 3090, 3522
BpuEI CTTGAG 6 cut(s) 64, 194, 290, 1621, 1873, 2674
BpuMI CCSGG 6 cut(s) 167, 168, 957, 2823, 2824, 3072
BsaBI GATNNNNATC 2 cut(s) 569, 2907
BsaI GGTCTC 1 cut(s) 3461
BsaJI CCNNGG 9 cut(s) 109, 166, 838, 1138, 1514, 2779, 2822, 2920, 2992
BsaWI WCCGGW 2 cut(s) 1704, 2495
BsaXI ACNNNNNCTCC 4 cut(s) 441, 471, 1532, 1562
Bse118I RCCGGY 1 cut(s) 350
Bse1I ACTGG 5 cut(s) 1732, 1756, 2383, 3044, 3289
Bse3DI GCAATG 4 cut(s) 1317, 3429, 3480, 3669
Bse8I GATNNNNATC 2 cut(s) 569, 2907
BseBI CCWGG 6 cut(s) 839, 1823, 2262, 2838, 2993, 3206
BseDI CCNNGG 9 cut(s) 109, 166, 838, 1138, 1514, 2779, 2822, 2920, 2992
BseGI GGATG 8 cut(s) 329, 654, 865, 1093, 1379, 1886, 3436, 3492
BseJI GATNNNNATC 2 cut(s) 569, 2907
BseMI GCAATG 4 cut(s) 1317, 3429, 3480, 3669
BseMII CTCAG 7 cut(s) 1553, 1921, 2276, 2336, 2549, 2903, 3472
BseNI ACTGG 5 cut(s) 1732, 1756, 2383, 3044, 3289
BseRI GAGGAG 2 cut(s) 277, 1523
BseXI GCAGC 5 cut(s) 409, 1860, 3447, 3487, 3661
BsgI GTGCAG 1 cut(s) 408
Bsh1236I CGCG 2 cut(s) 67, 3640
BshFI GGCC 5 cut(s) 765, 1437, 2382, 2680, 2841
BshNI GGYRCC 1 cut(s) 243
BsiHKAI GWGCWC 3 cut(s) 2545, 3477, 3666
BsiHKCI CYCGRG 4 cut(s) 143, 166, 579, 2822
BsiSI CCGG 7 cut(s) 167, 351, 956, 1705, 2496, 2823, 3071
BslFI GGGAC 3 cut(s) 183, 1938, 2757
BsmAI GTCTC 4 cut(s) 1849, 2181, 3461, 3726
BsmFI GGGAC 3 cut(s) 183, 1938, 2757
BsmI GAATGC 2 cut(s) 1024, 2678
BsnI GGCC 5 cut(s) 765, 1437, 2382, 2680, 2841
Bso31I GGTCTC 1 cut(s) 3461
BsoBI CYCGRG 4 cut(s) 143, 166, 579, 2822
Bsp1286I GDGCHC 3 cut(s) 2545, 3477, 3666
Bsp1407I TGTACA 3 cut(s) 1383, 2762, 3211
Bsp19I CCATGG 1 cut(s) 1138
BspACI CCGC 3 cut(s) 362, 3486, 3640
BspANI GGCC 5 cut(s) 765, 1437, 2382, 2680, 2841
BspCNI CTCAG 7 cut(s) 1554, 1920, 2277, 2337, 2550, 2904, 3471
BspFNI CGCG 2 cut(s) 67, 3640
BspHI TCATGA 2 cut(s) 1254, 2905
BspLI GGNNCC 8 cut(s) 245, 327, 1438, 1512, 2835, 3203, 3645, 3762
BspOI GCTAGC 1 cut(s) 837
BspQI GCTCTTC 3 cut(s) 1070, 1167, 2872
BspT107I GGYRCC 1 cut(s) 243
BspTNI GGTCTC 1 cut(s) 3461
BsrDI GCAATG 4 cut(s) 1317, 3429, 3480, 3669
BsrFI RCCGGY 1 cut(s) 350
BsrGI TGTACA 3 cut(s) 1383, 2762, 3211
BsrI ACTGG 5 cut(s) 1732, 1756, 2383, 3044, 3289
BssAI RCCGGY 1 cut(s) 350
BssECI CCNNGG 9 cut(s) 109, 166, 838, 1138, 1514, 2779, 2822, 2920, 2992
BssT1I CCWWGG 3 cut(s) 109, 1138, 2779
Bst2UI CCWGG 6 cut(s) 839, 1823, 2262, 2838, 2993, 3206
Bst6I CTCTTC 7 cut(s) 805, 1070, 1167, 1477, 2152, 2872, 3384
BstAPI GCANNNNNTGC 1 cut(s) 437
BstAUI TGTACA 3 cut(s) 1383, 2762, 3211
BstC8I GCNNGC 6 cut(s) 835, 987, 1077, 2072, 2678, 3600
BstDSI CCRYGG 1 cut(s) 1138
BstF5I GGATG 8 cut(s) 329, 654, 865, 1093, 1379, 1886, 3436, 3492
BstFNI CGCG 2 cut(s) 67, 3640
BstHHI GCGC 3 cut(s) 276, 1145, 3640
BstMAI GTCTC 4 cut(s) 1849, 2181, 3461, 3726
BstMWI GCNNNNNNNGC 7 cut(s) 428, 437, 991, 1928, 2847, 3033, 3049
BstNI CCWGG 6 cut(s) 839, 1823, 2262, 2838, 2993, 3206
BstNSI RCATGY 5 cut(s) 1079, 1612, 2074, 2806, 3170
BstSFI CTRYAG 1 cut(s) 2572
BstUI CGCG 2 cut(s) 67, 3640
BstV1I GCAGC 5 cut(s) 409, 1860, 3447, 3487, 3661
BstV2I GAAGAC 5 cut(s) 66, 205, 671, 3090, 3522
BstX2I RGATCY 4 cut(s) 325, 442, 3201, 3643
BstXI CCANNNNNNTGG 1 cut(s) 476
BstYI RGATCY 4 cut(s) 325, 442, 3201, 3643
BsuI GTATCC 3 cut(s) 597, 641, 2503
BsuRI GGCC 5 cut(s) 765, 1437, 2382, 2680, 2841
BtgI CCRYGG 1 cut(s) 1138
BtrI CACGTC 1 cut(s) 901
BtsCI GGATG 8 cut(s) 329, 654, 865, 1093, 1379, 1886, 3436, 3492
BtsI GCAGTG 1 cut(s) 3402
BtsIMutI CAGTG 6 cut(s) 78, 1353, 1725, 3282, 3402, 3451
Cac8I GCNNGC 6 cut(s) 835, 987, 1077, 2072, 2678, 3600
CaiI CAGNNNCTG 2 cut(s) 2746, 3039
CciI TCATGA 2 cut(s) 1254, 2905
CfoI GCGC 3 cut(s) 276, 1145, 3640
Cfr10I RCCGGY 1 cut(s) 350
Cfr13I GGNCC 2 cut(s) 282, 1436
Cfr9I CCCGGG 2 cut(s) 166, 2822
CseI GACGC 1 cut(s) 2383
CsiI ACCWGGT 1 cut(s) 1821
CspCI CAANNNNNGTGG 2 cut(s) 1304, 1339
DraI TTTAAA 2 cut(s) 804, 2355
Eam1104I CTCTTC 7 cut(s) 805, 1070, 1167, 1477, 2152, 2872, 3384
EarI CTCTTC 7 cut(s) 805, 1070, 1167, 1477, 2152, 2872, 3384
Eco130I CCWWGG 3 cut(s) 109, 1138, 2779
Eco31I GGTCTC 1 cut(s) 3461
Eco32I GATATC 2 cut(s) 160, 1643
Eco47I GGWCC 1 cut(s) 282
Eco57I CTGAAG 4 cut(s) 685, 732, 1051, 2883
Eco88I CYCGRG 4 cut(s) 143, 166, 579, 2822
EcoO109I RGGNCCY 1 cut(s) 282
EcoRI GAATTC 2 cut(s) 2019, 2202
EcoRII CCWGG 6 cut(s) 837, 1821, 2260, 2836, 2991, 3204
EcoRV GATATC 2 cut(s) 160, 1643
EcoT14I CCWWGG 3 cut(s) 109, 1138, 2779
EcoT22I ATGCAT 3 cut(s) 928, 1461, 1675
ErhI CCWWGG 3 cut(s) 109, 1138, 2779
FalI AAGNNNNNCTT 4 cut(s) 1535, 1567, 2962, 2994
FaqI GGGAC 3 cut(s) 183, 1938, 2757
FauI CCCGC 1 cut(s) 3633
FbaI TGATCA 1 cut(s) 1297
FblI GTMKAC 1 cut(s) 105
Fnu4HI GCNGC 6 cut(s) 423, 1849, 3436, 3486, 3501, 3675
FokI GGATG 8 cut(s) 316, 661, 872, 1080, 1386, 1873, 3443, 3479
Fsp4HI GCNGC 6 cut(s) 423, 1849, 3436, 3486, 3501, 3675
GlaI GCGC 3 cut(s) 275, 1144, 3639
GluI GCNGC 6 cut(s) 423, 1849, 3436, 3486, 3501, 3675
HaeIII GGCC 5 cut(s) 765, 1437, 2382, 2680, 2841
HapII CCGG 7 cut(s) 167, 351, 956, 1705, 2496, 2823, 3071
HgaI GACGC 1 cut(s) 2383
HhaI GCGC 3 cut(s) 276, 1145, 3640
Hin6I GCGC 3 cut(s) 274, 1143, 3638
HinP1I GCGC 3 cut(s) 274, 1143, 3638
HincII GTYRAC 3 cut(s) 106, 3099, 3300
HindII GTYRAC 3 cut(s) 106, 3099, 3300
HindIII AAGCTT 3 cut(s) 527, 1732, 3596
HpaI GTTAAC 2 cut(s) 3099, 3300
HpaII CCGG 7 cut(s) 167, 351, 956, 1705, 2496, 2823, 3071
HphI GGTGA 3 cut(s) 418, 1465, 3413
Hpy166II GTNNAC 7 cut(s) 106, 539, 1386, 2038, 3099, 3240, 3300
Hpy8I GTNNAC 7 cut(s) 106, 539, 1386, 2038, 3099, 3240, 3300
Hpy99I CGWCG 2 cut(s) 400, 3032
HpyAV CCTTC 9 cut(s) 448, 707, 1097, 1561, 2230, 2907, 3221, 3463, 3652
HpyCH4IV ACGT 3 cut(s) 321, 900, 1522
HpyF10VI GCNNNNNNNGC 7 cut(s) 428, 437, 991, 1928, 2847, 3033, 3049
HpySE526I ACGT 3 cut(s) 321, 900, 1522
HspAI GCGC 3 cut(s) 274, 1143, 3638
Ksp22I TGATCA 1 cut(s) 1297
KspAI GTTAAC 2 cut(s) 3099, 3300
LguI GCTCTTC 3 cut(s) 1070, 1167, 2872
LmnI GCTCC 3 cut(s) 792, 1510, 2166
Lsp1109I GCAGC 5 cut(s) 409, 1860, 3447, 3487, 3661
MabI ACCWGGT 1 cut(s) 1821
MaeII ACGT 3 cut(s) 321, 900, 1522
MaeIII GTNAC 7 cut(s) 1012, 1106, 1426, 1627, 2711, 3550, 3626
MfeI CAATTG 4 cut(s) 1098, 1431, 1587, 2389
MflI RGATCY 4 cut(s) 325, 442, 3201, 3643
MhlI GDGCHC 3 cut(s) 2545, 3477, 3666
MluI ACGCGT 1 cut(s) 65
MlyI GAGTC 6 cut(s) 494, 1541, 2018, 2183, 3512, 3755
MmeI TCCRAC 2 cut(s) 1751, 1772
Mph1103I ATGCAT 3 cut(s) 928, 1461, 1675
MroXI GAANNNNTTC 5 cut(s) 574, 1064, 1236, 1491, 1743
MslI CAYNNNNRTG 4 cut(s) 1917, 2730, 2754, 3588
MspI CCGG 7 cut(s) 167, 351, 956, 1705, 2496, 2823, 3071
MunI CAATTG 4 cut(s) 1098, 1431, 1587, 2389
Mva1269I GAATGC 2 cut(s) 1024, 2678
MvaI CCWGG 6 cut(s) 839, 1823, 2262, 2838, 2993, 3206
MvnI CGCG 2 cut(s) 67, 3640
MwoI GCNNNNNNNGC 7 cut(s) 428, 437, 991, 1928, 2847, 3033, 3049
NciI CCSGG 6 cut(s) 167, 168, 957, 2823, 2824, 3072
NcoI CCATGG 1 cut(s) 1138
NheI GCTAGC 1 cut(s) 833
NlaIV GGNNCC 8 cut(s) 245, 327, 1438, 1512, 2835, 3203, 3645, 3762
NmuCI GTSAC 2 cut(s) 1627, 3550
NsiI ATGCAT 3 cut(s) 928, 1461, 1675
NspI RCATGY 5 cut(s) 1079, 1612, 2074, 2806, 3170
PaeI GCATGC 2 cut(s) 1079, 2074
PaeR7I CTCGAG 2 cut(s) 143, 579
PagI TCATGA 2 cut(s) 1254, 2905
PciI ACATGT 1 cut(s) 2802
PciSI GCTCTTC 3 cut(s) 1070, 1167, 2872
PcsI WCGNNNNNNNCGW 2 cut(s) 124, 141
PctI GAATGC 2 cut(s) 1024, 2678
PdmI GAANNNNTTC 5 cut(s) 574, 1064, 1236, 1491, 1743
PfeI GAWTC 9 cut(s) 570, 1052, 1405, 1468, 1790, 2450, 2916, 3118, 3350
PflMI CCANNNNNTGG 2 cut(s) 2378, 3654
PfoI TCCNGGA 1 cut(s) 955
PkrI GCNGC 6 cut(s) 424, 1850, 3437, 3487, 3502, 3676
PleI GAGTC 6 cut(s) 493, 1541, 2017, 2182, 3512, 3754
PpsI GAGTC 6 cut(s) 493, 1541, 2017, 2182, 3512, 3754
PpuMI RGGWCCY 1 cut(s) 282
PscI ACATGT 1 cut(s) 2802
PshBI ATTAAT 1 cut(s) 594
PsiI TTATAA 1 cut(s) 497
Psp5II RGGWCCY 1 cut(s) 282
Psp6I CCWGG 6 cut(s) 837, 1821, 2260, 2836, 2991, 3204
PspGI CCWGG 6 cut(s) 837, 1821, 2260, 2836, 2991, 3204
PspN4I GGNNCC 8 cut(s) 245, 327, 1438, 1512, 2835, 3203, 3645, 3762
PspPI GGNCC 2 cut(s) 282, 1436
PspPPI RGGWCCY 1 cut(s) 282
PsrI GAACNNNNNNTAC 2 cut(s) 23, 55
PstNI CAGNNNCTG 2 cut(s) 2746, 3039
PsuI RGATCY 4 cut(s) 325, 442, 3201, 3643
RseI CAYNNNNRTG 4 cut(s) 1917, 2730, 2754, 3588
SalI GTCGAC 1 cut(s) 104
SapI GCTCTTC 3 cut(s) 1070, 1167, 2872
SatI GCNGC 6 cut(s) 423, 1849, 3436, 3486, 3501, 3675
Sau96I GGNCC 2 cut(s) 282, 1436
ScaI AGTACT 1 cut(s) 1560
SchI GAGTC 6 cut(s) 494, 1541, 2018, 2183, 3512, 3755
SduI GDGCHC 3 cut(s) 2545, 3477, 3666
SexAI ACCWGGT 1 cut(s) 1821
SfcI CTRYAG 1 cut(s) 2572
Sfr274I CTCGAG 2 cut(s) 143, 579
SinI GGWCC 1 cut(s) 282
SlaI CTCGAG 2 cut(s) 143, 579
SmaI CCCGGG 2 cut(s) 168, 2824
SmiMI CAYNNNNRTG 4 cut(s) 1917, 2730, 2754, 3588
SmlI CTYRAG 8 cut(s) 43, 143, 173, 269, 579, 1636, 1852, 2653
SmoI CTYRAG 8 cut(s) 43, 143, 173, 269, 579, 1636, 1852, 2653
SphI GCATGC 2 cut(s) 1079, 2074
SsiI CCGC 3 cut(s) 362, 3486, 3640
SspI AATATT 4 cut(s) 736, 1863, 2086, 3754
StyI CCWWGG 3 cut(s) 109, 1138, 2779
TaiI ACGT 3 cut(s) 324, 903, 1525
TatI WGTACW 8 cut(s) 823, 1282, 1383, 1558, 1842, 2762, 2810, 3211
TauI GCSGC 1 cut(s) 3488
TfiI GAWTC 9 cut(s) 570, 1052, 1405, 1468, 1790, 2450, 2916, 3118, 3350
TscAI CASTG 6 cut(s) 85, 1360, 1732, 3289, 3402, 3451
TseFI GTSAC 2 cut(s) 1627, 3550
TseI GCWGC 5 cut(s) 422, 1848, 3435, 3500, 3674
Tsp45I GTSAC 2 cut(s) 1627, 3550
TspMI CCCGGG 2 cut(s) 166, 2822
TspRI CASTG 6 cut(s) 85, 1360, 1732, 3289, 3402, 3451
Van91I CCANNNNNTGG 2 cut(s) 2378, 3654
VpaK11BI GGWCC 1 cut(s) 282
VspI ATTAAT 1 cut(s) 594
XapI RAATTY 4 cut(s) 707, 1742, 2019, 2202
XbaI TCTAGA 3 cut(s) 2023, 2413, 3526
XceI RCATGY 5 cut(s) 1079, 1612, 2074, 2806, 3170
XcmI CCANNNNNNNNNTGG 2 cut(s) 1447, 2012
XhoI CTCGAG 2 cut(s) 143, 579
XmaI CCCGGG 2 cut(s) 166, 2822
XmiI GTMKAC 1 cut(s) 105
XmnI GAANNNNTTC 5 cut(s) 574, 1064, 1236, 1491, 1743
ZrmI AGTACT 1 cut(s) 1560
Zsp2I ATGCAT 3 cut(s) 928, 1461, 1675
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.